AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0264680


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0264680 MtrunA17_Chr2g0328891 97.790 362 8 0 1 362 1 362 0.0 720
Msa0264680 MtrunA17_Chr3g0088301 73.389 357 92 2 7 362 35 389 0.0 519
Msa0264680 MtrunA17_Chr4g0040341 72.118 373 88 3 2 361 1 370 0.0 514
Msa0264680 MtrunA17_Chr8g0352031 73.481 362 87 3 8 362 6 365 6.07e-180 503
Msa0264680 MtrunA17_Chr8g0393031 58.947 285 117 0 65 349 17 301 1.05e-126 366
Msa0264680 MtrunA17_Chr3g0135801 40.260 308 172 7 55 355 23 325 3.53e-71 225
Msa0264680 MtrunA17_Chr5g0396801 31.013 316 165 11 54 336 26 321 3.57e-35 131
Msa0264680 MtrunA17_Chr5g0396801 24.876 201 134 4 69 258 144 338 1.28e-11 65.1
Msa0264680 MtrunA17_Chr3g0135861 30.573 314 180 10 62 352 31 329 4.77e-35 131
Msa0264680 MtrunA17_Chr6g0488081 28.094 299 194 6 62 349 15 303 3.90e-34 128
Msa0264680 MtrunA17_Chr8g0347451 31.847 314 157 12 59 336 44 336 2.35e-33 127
Msa0264680 MtrunA17_Chr1g0149111 29.643 280 173 8 66 341 139 398 1.23e-30 120
Msa0264680 MtrunA17_Chr1g0149111 27.962 211 127 5 54 259 221 411 1.39e-16 80.5
Msa0264680 MtrunA17_Chr3g0137941 28.814 295 175 10 69 353 125 394 5.19e-30 119
Msa0264680 MtrunA17_Chr3g0137941 26.941 219 141 4 43 259 193 394 1.75e-17 83.2
Msa0264680 MtrunA17_Chr3g0137941 29.189 185 111 5 171 349 122 292 1.70e-13 71.2
Msa0264680 MtrunA17_Chr7g0240341 29.097 299 195 8 64 352 23 314 1.34e-29 116
Msa0264680 MtrunA17_Chr4g0006851 31.724 290 175 8 66 352 89 358 1.08e-28 114
Msa0264680 MtrunA17_Chr4g0063561 25.839 298 186 8 66 353 123 395 1.07e-26 109
Msa0264680 MtrunA17_Chr4g0063561 27.488 211 131 4 52 259 204 395 4.79e-17 81.6
Msa0264680 MtrunA17_Chr7g0242311 31.047 277 160 8 77 346 98 350 1.61e-26 108
Msa0264680 MtrunA17_Chr5g0436041 27.097 310 206 8 52 352 23 321 4.96e-26 106
Msa0264680 MtrunA17_Chr8g0385571 27.500 280 183 7 66 341 227 490 1.08e-23 102
Msa0264680 MtrunA17_Chr2g0296061 28.013 307 186 9 69 346 18 318 1.77e-23 99.4
Msa0264680 MtrunA17_Chr7g0252401 28.421 285 171 8 66 341 207 467 1.40e-22 98.6
Msa0264680 MtrunA17_Chr3g0131501 27.576 330 205 13 22 341 163 468 1.48e-22 98.6
Msa0264680 MtrunA17_Chr4g0067231 26.074 326 202 9 54 348 4 321 5.95e-22 95.1
Msa0264680 MtrunA17_Chr4g0000261 25.085 295 185 7 65 341 65 341 5.85e-20 90.1
Msa0264680 MtrunA17_Chr7g0241521 24.164 269 195 5 61 327 12 273 2.80e-19 87.0
Msa0264680 MtrunA17_Chr3g0133111 26.481 287 178 9 66 327 6 284 1.17e-18 85.5
Msa0264680 MtrunA17_Chr3g0133111 27.347 245 144 9 7 233 57 285 9.05e-12 65.5
Msa0264680 MtrunA17_Chr3g0115801 27.273 297 168 11 69 341 119 391 6.52e-18 84.3
Msa0264680 MtrunA17_Chr4g0008061 25.166 302 204 9 57 353 6 290 1.22e-17 82.4
Msa0264680 MtrunA17_Chr1g0196921 22.015 268 197 4 64 327 12 271 3.44e-17 81.3
Msa0264680 MtrunA17_Chr1g0196921 29.762 168 110 4 67 233 112 272 1.42e-14 73.6
Msa0264680 MtrunA17_Chr4g0028531 25.592 211 136 5 67 271 116 311 1.02e-15 77.0
Msa0264680 MtrunA17_Chr6g0463041 25.792 221 128 5 164 349 18 237 1.31e-15 75.9
Msa0264680 MtrunA17_Chr6g0488341 25.105 239 158 6 115 349 7 228 2.33e-15 74.7
Msa0264680 MtrunA17_Chr4g0004571 25.833 240 162 6 115 346 55 286 5.78e-15 74.7
Msa0264680 MtrunA17_Chr4g0004571 25.114 219 153 4 34 252 79 286 6.05e-13 68.9
Msa0264680 MtrunA17_Chr2g0331771 23.776 286 201 6 65 346 155 427 1.40e-14 74.7
Msa0264680 MtrunA17_Chr5g0411411 24.832 298 198 9 63 346 6 291 2.98e-14 72.4
Msa0264680 MtrunA17_Chr8g0382201 24.662 296 177 10 69 341 198 470 4.10e-14 73.6
Msa0264680 MtrunA17_Chr5g0412401 21.993 291 195 6 66 327 6 293 7.83e-14 71.6
Msa0264680 MtrunA17_Chr8g0366791 24.915 293 204 7 63 346 6 291 1.05e-13 70.9
Msa0264680 MtrunA17_Chr3g0103681 23.611 288 204 6 53 334 2 279 1.70e-13 70.5
Msa0264680 MtrunA17_Chr3g0103681 27.861 201 127 5 167 353 11 207 1.39e-11 64.7
Msa0264680 MtrunA17_Chr8g0367641 32.558 129 80 3 106 233 165 287 4.94e-12 66.2
Msa0264680 MtrunA17_Chr8g0367641 21.959 296 196 8 66 334 6 293 6.17e-11 62.8
Msa0264680 MtrunA17_Chr7g0219891 28.185 259 148 11 117 351 65 309 1.34e-11 64.7
Msa0264680 MtrunA17_Chr3g0126331 25.442 283 162 11 106 356 125 390 5.58e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0264680 AT5G13490.1 71.279 383 85 3 5 362 3 385 0.0 528
Msa0264680 AT5G13490.2 71.279 383 85 3 5 362 3 385 0.0 528
Msa0264680 AT3G08580.2 72.032 379 79 5 8 362 6 381 0.0 517
Msa0264680 AT3G08580.1 72.032 379 79 5 8 362 6 381 0.0 517
Msa0264680 AT4G28390.1 77.101 345 71 2 17 361 42 378 0.0 515
Msa0264680 AT4G28390.2 77.101 345 71 2 17 361 42 378 0.0 515
Msa0264680 AT5G17400.1 62.500 288 108 0 62 349 10 297 1.19e-131 379
Msa0264680 AT5G56450.1 38.710 310 171 7 52 349 20 322 5.21e-67 214
Msa0264680 AT3G55640.1 28.618 304 200 7 56 350 28 323 1.19e-35 133
Msa0264680 AT3G55640.4 28.618 304 200 7 56 350 28 323 1.19e-35 133
Msa0264680 AT2G37890.1 29.630 297 192 7 65 352 44 332 9.07e-34 128
Msa0264680 AT3G53940.1 31.544 298 183 9 66 352 73 360 3.71e-33 127
Msa0264680 AT1G14560.1 28.470 281 175 6 77 341 38 308 1.60e-31 122
Msa0264680 AT1G14560.2 28.727 275 170 6 77 335 38 302 6.26e-31 119
Msa0264680 AT4G26180.1 30.492 305 186 10 62 352 17 309 6.50e-31 120
Msa0264680 AT4G01100.1 30.255 314 162 11 59 336 35 327 1.41e-30 119
Msa0264680 AT4G01100.1 24.878 205 131 6 69 258 148 344 1.31e-11 65.5
Msa0264680 AT5G01500.1 32.616 279 165 9 77 352 130 388 2.30e-30 120
Msa0264680 AT4G26180.2 31.359 287 172 9 62 335 17 291 3.82e-30 117
Msa0264680 AT3G51870.1 32.155 283 161 11 77 352 102 360 1.03e-28 115
Msa0264680 AT4G01100.2 29.467 319 172 11 59 336 35 341 1.43e-28 114
Msa0264680 AT4G01100.2 24.878 205 131 6 69 258 162 358 1.59e-11 65.5
Msa0264680 AT4G32400.1 30.605 281 169 10 66 341 114 373 2.34e-28 114
Msa0264680 AT4G32400.1 28.571 196 120 5 67 259 208 386 1.13e-13 72.0
Msa0264680 AT4G32400.1 28.962 183 114 5 171 349 114 284 3.32e-12 67.8
Msa0264680 AT4G01100.3 29.373 303 157 11 75 341 1 282 3.62e-27 109
Msa0264680 AT4G01100.3 24.878 205 131 6 69 258 98 294 9.75e-12 65.5
Msa0264680 AT3G21390.1 28.065 310 184 8 69 346 22 324 2.12e-24 102
Msa0264680 AT3G21390.2 28.065 310 184 8 69 346 44 346 2.98e-24 102
Msa0264680 AT3G20240.1 24.916 297 187 7 63 341 49 327 3.00e-24 102
Msa0264680 AT5G48970.1 27.097 310 188 8 69 346 25 328 9.77e-24 100
Msa0264680 AT1G14560.3 30.500 200 121 5 170 352 24 222 4.76e-23 96.7
Msa0264680 AT5G51050.1 28.485 330 199 12 22 341 181 483 2.02e-22 98.6
Msa0264680 AT3G55640.2 26.786 224 151 4 56 274 28 243 6.56e-22 94.0
Msa0264680 AT3G55640.3 26.786 224 151 4 56 274 28 243 6.56e-22 94.0
Msa0264680 AT3G53940.2 31.401 207 126 5 66 266 73 269 1.55e-20 90.9
Msa0264680 AT5G61810.2 26.335 281 177 8 66 341 65 320 2.26e-20 91.3
Msa0264680 AT5G61810.1 26.335 281 177 8 66 341 208 463 8.31e-20 90.9
Msa0264680 AT5G48970.2 27.165 254 154 6 118 346 10 257 1.99e-19 87.4
Msa0264680 AT3G54110.1 24.759 311 204 9 57 357 6 296 2.99e-19 87.4
Msa0264680 AT5G07320.1 25.926 270 174 7 75 341 218 464 5.49e-19 88.6
Msa0264680 AT5G58970.1 23.656 279 198 6 61 334 11 279 2.22e-17 82.0
Msa0264680 AT5G58970.1 29.949 197 119 7 167 349 12 203 1.06e-13 71.6
Msa0264680 AT5G64970.1 26.014 296 173 10 69 341 138 410 7.42e-16 79.0
Msa0264680 AT1G79900.1 28.870 239 147 7 115 346 55 277 2.35e-15 76.3
Msa0264680 AT5G64970.2 26.351 296 172 11 69 341 14 286 3.50e-15 75.9
Msa0264680 AT1G14140.1 23.704 270 199 4 60 327 10 274 3.97e-15 75.5
Msa0264680 AT1G14140.1 28.283 198 124 6 171 356 18 209 8.82e-13 68.6
Msa0264680 AT5G09470.1 27.727 220 143 6 114 327 97 306 4.52e-15 75.9
Msa0264680 AT5G64970.3 26.644 289 166 10 69 334 138 403 4.65e-15 76.3
Msa0264680 AT1G78180.1 25.333 300 170 8 69 341 131 403 2.55e-14 74.3
Msa0264680 AT5G58970.2 29.949 197 119 6 167 349 12 203 9.86e-14 71.2
Msa0264680 AT4G27940.1 23.438 256 178 6 106 345 146 399 1.13e-13 72.0
Msa0264680 AT5G66380.1 29.146 199 119 5 170 356 9 197 1.23e-13 71.2
Msa0264680 AT4G03115.1 23.592 284 171 9 59 327 31 283 5.53e-13 69.3
Msa0264680 AT4G03115.3 23.592 284 171 9 59 327 63 315 6.84e-13 69.3
Msa0264680 AT5G46800.2 25.753 299 193 9 65 346 7 293 2.45e-12 67.4
Msa0264680 AT5G46800.3 25.753 299 193 9 65 346 7 293 2.45e-12 67.4
Msa0264680 AT5G46800.1 25.753 299 193 9 65 346 7 293 2.45e-12 67.4
Msa0264680 AT2G22500.1 25.000 288 179 8 66 327 6 282 3.09e-12 67.0
Msa0264680 AT2G33820.4 28.723 188 118 6 162 341 13 192 6.48e-12 65.9
Msa0264680 AT1G25380.1 22.845 232 160 7 117 339 71 292 1.25e-11 65.9
Msa0264680 AT1G25380.1 28.977 176 113 4 184 352 34 204 1.90e-11 65.1
Msa0264680 AT1G25380.2 22.845 232 160 7 117 339 71 292 1.25e-11 65.9
Msa0264680 AT1G25380.2 28.977 176 113 4 184 352 34 204 1.90e-11 65.1
Msa0264680 AT2G33820.1 21.382 304 222 7 62 356 14 309 2.29e-11 64.7
Msa0264680 AT1G34065.1 22.876 306 181 10 39 333 54 315 8.52e-11 63.2
Msa0264680 AT1G34065.2 22.876 306 181 10 39 333 47 308 9.79e-11 62.8

Find 80 sgRNAs with CRISPR-Local

Find 226 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCACCTTTGAAGAGAGATTT+TGG 0.201047 2_2:+64630971 None:intergenic
CCATCATCTTATGCTGTATA+AGG 0.215845 2_2:+64630824 None:intergenic
GTGTACCGTGGTTTGTATTT+TGG 0.236923 2_2:-64631978 Msa0264680:CDS
GCTCTTGGTAGGAACGTTTC+AGG 0.238857 2_2:-64631931 Msa0264680:intron
CTTATGTTGGGAAAGAAATA+TGG 0.285268 2_2:-64630881 Msa0264680:CDS
TCCACCTTTCTTCGTGGACT+TGG 0.300851 2_2:+64632106 None:intergenic
AAGGGTATTGGAGATTGTTT+TGG 0.320804 2_2:-64632499 Msa0264680:CDS
CCTCTCTCCACCTTTCTTCG+TGG 0.345988 2_2:+64632100 None:intergenic
AGCAAGAGAGAGATGGATAT+TGG 0.356655 2_2:-64632232 Msa0264680:CDS
GGCTTCAATGTTTCAGTTGT+TGG 0.362007 2_2:-64632008 Msa0264680:CDS
TGTAAAGTACAAGAGTTCTT+TGG 0.375179 2_2:-64631026 Msa0264680:CDS
AAATCAAGATGAGATGATTA+AGG 0.376906 2_2:-64632545 Msa0264680:CDS
ATGAAGGATTTACTTCGCTT+TGG 0.383588 2_2:-64632462 Msa0264680:CDS
AGAAGCTTCACGCGCTCAAT+AGG 0.386608 2_2:+64632574 None:intergenic
TTTGTGCTACTGTTGGGTAT+TGG 0.390598 2_2:+64632797 None:intergenic
AACTGTTTCTGAAACAGAAC+AGG 0.406642 2_2:+64632712 None:intergenic
CTTCGAGCAGTTGCTGGTGC+TGG 0.406961 2_2:-64630935 Msa0264680:CDS
TTCCGTCTTTGTTTACTCGT+TGG 0.409566 2_2:-64632159 Msa0264680:CDS
TTGCAATCAGATGGTATTGC+TGG 0.410642 2_2:-64632041 Msa0264680:CDS
AACATTCTTCGAGCAGTTGC+TGG 0.413671 2_2:-64630941 Msa0264680:CDS
TGCAAGCTATGATAAACTTC+AGG 0.423170 2_2:-64630906 Msa0264680:CDS
GGAAGAACAGTTAAAGATGA+AGG 0.423659 2_2:-64632478 Msa0264680:CDS
CCACATATTGCAAATTCCTA+TGG 0.426920 2_2:-64632748 Msa0264680:CDS
AAACTTCAGGTGCTTATGTT+GGG 0.430704 2_2:-64630893 Msa0264680:CDS
TAGCTAGCTTTGCCCTAGGA+TGG 0.434987 2_2:-64631129 Msa0264680:CDS
CCAACAGTAGCACAAAAGTT+TGG 0.442652 2_2:-64632790 Msa0264680:CDS
GGATATTGGAAAGTCTTTGC+AGG 0.443053 2_2:-64632218 Msa0264680:CDS
TTCTCTTAAGCCAGTGCTCT+TGG 0.444590 2_2:-64631946 Msa0264680:CDS
CAACTGTAACAGCCCATCCT+AGG 0.444717 2_2:+64631116 None:intergenic
TCTGAGCCTTACAAGGGTAT+TGG 0.448802 2_2:-64632511 Msa0264680:CDS
ATTGCATCTGGTGCTGCAGC+AGG 0.453223 2_2:-64632191 Msa0264680:CDS
TTGGGAAAGAAATATGGTTC+TGG 0.461893 2_2:-64630875 Msa0264680:CDS
TGGAACAAACACTGCATTTG+AGG 0.462013 2_2:+64632684 None:intergenic
TTTGCAGGAAATATTGCATC+TGG 0.462558 2_2:-64632203 Msa0264680:CDS
GCCAAACCTGACTGAAAGAT+AGG 0.471436 2_2:+64634658 None:intergenic
TGGACTTGGCGTCGCTTGCA+AGG 0.475415 2_2:+64632120 None:intergenic
CAATCTCCAATACCCTTGTA+AGG 0.475979 2_2:+64632505 None:intergenic
AGCTAGCTTTGCCCTAGGAT+GGG 0.478146 2_2:-64631128 Msa0264680:CDS
ATACAACCTATCTTTCAGTC+AGG 0.481381 2_2:-64634664 Msa0264680:intron
AAATCTCTCTTCAAAGGTGC+TGG 0.485223 2_2:-64630968 Msa0264680:CDS
TAAACTTCAGGTGCTTATGT+TGG 0.486307 2_2:-64630894 Msa0264680:CDS
CCATAGGAATTTGCAATATG+TGG 0.487479 2_2:+64632748 None:intergenic
GATAGGTTGTATCCTTTATG+TGG 0.489628 2_2:+64634675 None:intergenic
CATTGATGATGGCTGATAAG+AGG 0.495678 2_2:-64632822 Msa0264680:exon
GACGCCAAGTCCACGAAGAA+AGG 0.496546 2_2:-64632110 Msa0264680:CDS
TTCCTAGCTAGCTTTGCCCT+AGG 0.508251 2_2:-64631133 Msa0264680:CDS
TAGGCTCTCTGAGCCTTACA+AGG 0.509331 2_2:-64632518 Msa0264680:CDS
ATATTCCATCAGCCACATAA+AGG 0.511463 2_2:-64634687 Msa0264680:five_prime_UTR
AGAAGAATGATGATGACATC+AGG 0.514497 2_2:-64631055 Msa0264680:CDS
ATTTGAAAGGAAACCTGTGT+TGG 0.521968 2_2:+64632406 None:intergenic
TCACAAATTGTGAAAACTGA+AGG 0.528718 2_2:-64630995 Msa0264680:CDS
CTTCTACGAACAGTGTCTAA+AGG 0.537254 2_2:+64631073 None:intergenic
ATCCTAGGGCAAAGCTAGCT+AGG 0.537911 2_2:+64631131 None:intergenic
CTTAAGCCAGTGCTCTTGGT+AGG 0.545019 2_2:-64631942 Msa0264680:CDS
TGTATCCTTTATGTGGCTGA+TGG 0.545328 2_2:+64634682 None:intergenic
GGTCCAAAATCTCTCTTCAA+AGG 0.557932 2_2:-64630974 Msa0264680:CDS
CAAGATGAGATGATTAAGGC+TGG 0.558576 2_2:-64632541 Msa0264680:CDS
CCTTATACAGCATAAGATGA+TGG 0.560896 2_2:-64630824 Msa0264680:three_prime_UTR
GGTGGAGAGAGGCAATTCAA+TGG 0.564939 2_2:-64632089 Msa0264680:CDS
AACTTCAAGCAAGAGAGAGA+TGG 0.570273 2_2:-64632239 Msa0264680:CDS
CTAGGATGGGCTGTTACAGT+TGG 0.574759 2_2:-64631115 Msa0264680:CDS
AGCACTCAAAGCATTGATGA+TGG 0.577209 2_2:-64632833 Msa0264680:exon
CATATTGCAAATTCCTATGG+AGG 0.577721 2_2:-64632745 Msa0264680:CDS
GAACAAAAGATCTGATCTTG+TGG 0.579459 2_2:+64634710 None:intergenic
GGAAAGAAATATGGTTCTGG+TGG 0.583008 2_2:-64630872 Msa0264680:CDS
AAACCTGTGTTGGAAAGTAA+CGG 0.584984 2_2:+64632416 None:intergenic
ATGAGATGATTAAGGCTGGT+AGG 0.586726 2_2:-64632537 Msa0264680:CDS
AAGAAGACATTGCAATCAGA+TGG 0.590470 2_2:-64632050 Msa0264680:CDS
AACTGTAACAGCCCATCCTA+GGG 0.595417 2_2:+64631117 None:intergenic
GGATTTACTTCGCTTTGGAG+AGG 0.595722 2_2:-64632457 Msa0264680:CDS
AAAGTAACGGATAACATTGA+CGG 0.603182 2_2:+64632429 None:intergenic
GCCAAGTCCACGAAGAAAGG+TGG 0.603618 2_2:-64632107 Msa0264680:CDS
GGTATTGCTGGTCTTTATCG+CGG 0.608830 2_2:-64632029 Msa0264680:CDS
AACGTTCCTACCAAGAGCAC+TGG 0.609300 2_2:+64631936 None:intergenic
ATCCAACGAGTAAACAAAGA+CGG 0.620833 2_2:+64632157 None:intergenic
TATCCGTTACTTTCCAACAC+AGG 0.620843 2_2:-64632419 Msa0264680:intron
CCACGAAGAAAGGTGGAGAG+AGG 0.629455 2_2:-64632100 Msa0264680:CDS
ACAGTCCAAAATACAAACCA+CGG 0.665396 2_2:+64631973 None:intergenic
GTTGGAATCATTGTGTACCG+TGG 0.672437 2_2:-64631990 Msa0264680:CDS
AGGCTCTCTGAGCCTTACAA+GGG 0.675743 2_2:-64632517 Msa0264680:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTGAAATATTCATAATTTT+CGG + chr2_2:64631282-64631301 None:intergenic 10.0%
!! AAATTATGAATATTTCAAAA+AGG - chr2_2:64631283-64631302 Msa0264680:intron 10.0%
!!! AACAAAAAAACTAAATTTTA+AGG + chr2_2:64632219-64632238 None:intergenic 10.0%
!!! AAATTTTTAAAATATTGGTA+GGG - chr2_2:64634042-64634061 Msa0264680:intron 10.0%
!!! ATATTATTTTACAAAATTTC+AGG - chr2_2:64634258-64634277 Msa0264680:intron 10.0%
!!! AAATTGATTATTTTTTTCTT+TGG - chr2_2:64634649-64634668 Msa0264680:intron 10.0%
!!! TTGAAATATTCATAATTTTC+GGG + chr2_2:64631281-64631300 None:intergenic 15.0%
!! TAATTATGTTATGTACTTTA+AGG + chr2_2:64632505-64632524 None:intergenic 15.0%
!! TATATTAAAAAGTAGAAAAC+CGG - chr2_2:64633919-64633938 Msa0264680:intron 15.0%
!!! TCGTCAAATTTTTAAAATAT+TGG - chr2_2:64634037-64634056 Msa0264680:intron 15.0%
!!! CAAATTTTTAAAATATTGGT+AGG - chr2_2:64634041-64634060 Msa0264680:intron 15.0%
!!! AATTTTTAAAATATTGGTAG+GGG - chr2_2:64634043-64634062 Msa0264680:intron 15.0%
!! TCATATTAAATCATACTCAA+GGG + chr2_2:64630870-64630889 None:intergenic 20.0%
!! TTCATATTAAATCATACTCA+AGG + chr2_2:64630871-64630890 None:intergenic 20.0%
!!! ATTAAGTTGTTTATTCAAAC+TGG + chr2_2:64630932-64630951 None:intergenic 20.0%
!! AAAGTTAAGGACAAATTTAA+TGG - chr2_2:64631435-64631454 Msa0264680:intron 20.0%
!! TATTATTATAGTGAAAAGGT+TGG + chr2_2:64631614-64631633 None:intergenic 20.0%
!! TGGTTATTATTATAGTGAAA+AGG + chr2_2:64631618-64631637 None:intergenic 20.0%
!!! GGCTGATTTATTTTAATATA+TGG - chr2_2:64631939-64631958 Msa0264680:CDS 20.0%
!!! CTAAATTTTAAGGATCTAAA+CGG + chr2_2:64632209-64632228 None:intergenic 20.0%
!! TAAGGAAATAATGAAAACTT+AGG + chr2_2:64632487-64632506 None:intergenic 20.0%
!!! ACTGCATTAATTATTTCTTT+AGG - chr2_2:64633041-64633060 Msa0264680:intron 20.0%
!! TAACATGATTAATCTATTAC+AGG - chr2_2:64633116-64633135 Msa0264680:intron 20.0%
!! AAAGAGAAAAAAGTTAGTTA+AGG - chr2_2:64633682-64633701 Msa0264680:intron 20.0%
!! AATTTGACGAAACAAAAATT+TGG + chr2_2:64634027-64634046 None:intergenic 20.0%
!!! ATAGTTTGCTGAATATTTTT+TGG - chr2_2:64634701-64634720 Msa0264680:five_prime_UTR 20.0%
!! ACAATTTTTACAAGCTATCA+CGG - chr2_2:64631033-64631052 Msa0264680:CDS 25.0%
! CCTTTAATTCCAATACATAA+TGG + chr2_2:64631206-64631225 None:intergenic 25.0%
! CCATTATGTATTGGAATTAA+AGG - chr2_2:64631203-64631222 Msa0264680:intron 25.0%
! TTTGTGAAATGCTTTCAAAT+AGG - chr2_2:64631254-64631273 Msa0264680:intron 25.0%
!!! TCTCAAATAAAAAAGGTATC+TGG + chr2_2:64631406-64631425 None:intergenic 25.0%
! AAATTTGTCCTTAACTTTGT+AGG + chr2_2:64631433-64631452 None:intergenic 25.0%
!!! ATTTTGAACAGTGTTTTAGT+AGG - chr2_2:64631474-64631493 Msa0264680:intron 25.0%
!!! AACTTTTCAGATTTCAAGTT+CGG + chr2_2:64631511-64631530 None:intergenic 25.0%
!! TAGTGACATATATGTTTCTA+AGG - chr2_2:64631688-64631707 Msa0264680:intron 25.0%
!! TGTTATTTGAACAACCAATT+TGG - chr2_2:64631741-64631760 Msa0264680:intron 25.0%
!!! ACTTTTTCCTTTGTAAAGTA+TGG + chr2_2:64631785-64631804 None:intergenic 25.0%
! ATACTTTACAAAGGAAAAAG+TGG - chr2_2:64631784-64631803 Msa0264680:intron 25.0%
!! TCATTTCTCTTAACTTTTGT+AGG - chr2_2:64631910-64631929 Msa0264680:intron 25.0%
!! AGTCATATCGTTGAATTTTA+AGG - chr2_2:64632033-64632052 Msa0264680:CDS 25.0%
!!! TAATTTCTAGGTGGATTATA+AGG + chr2_2:64632394-64632413 None:intergenic 25.0%
!!! TAGCCTAACATAATTTGTTT+TGG - chr2_2:64632523-64632542 Msa0264680:CDS 25.0%
! AAATCAAGATGAGATGATTA+AGG - chr2_2:64632874-64632893 Msa0264680:intron 25.0%
! AATGCAGTTGAAAATTTGAA+AGG + chr2_2:64633029-64633048 None:intergenic 25.0%
! CGAAAATGTAATTTAGACAT+TGG + chr2_2:64633067-64633086 None:intergenic 25.0%
! AGATTAATCATGTTAGACAT+TGG + chr2_2:64633111-64633130 None:intergenic 25.0%
!!! CGATGTTTTAAAATCCAAAT+CGG - chr2_2:64633805-64633824 Msa0264680:intron 25.0%
! AATCAGAATGTGTTACAATT+AGG - chr2_2:64633979-64633998 Msa0264680:intron 25.0%
!!! TATTTTAGAGCAGCAAATTT+TGG + chr2_2:64634241-64634260 None:intergenic 25.0%
CATGTAACTTAACACAAACA+TGG + chr2_2:64630815-64630834 None:intergenic 30.0%
ATCATACTCAAGGGTTTAAA+AGG + chr2_2:64630861-64630880 None:intergenic 30.0%
! GCTCAAAGTGTTTATCTATA+TGG - chr2_2:64630956-64630975 Msa0264680:CDS 30.0%
!! AAAATCAGAGACTAGTTTGA+TGG + chr2_2:64631237-64631256 None:intergenic 30.0%
AAAAGGTTAAACAGTCAAGT+TGG - chr2_2:64631300-64631319 Msa0264680:intron 30.0%
AGGACACTCTCAAATAAAAA+AGG + chr2_2:64631413-64631432 None:intergenic 30.0%
!!! GTGTTTTAGTAGGTTTAACA+AGG - chr2_2:64631484-64631503 Msa0264680:intron 30.0%
CAAATAAGTTGTCACCAAAT+TGG + chr2_2:64631758-64631777 None:intergenic 30.0%
TTGACAACCATACTTTACAA+AGG - chr2_2:64631775-64631794 Msa0264680:intron 30.0%
! TCTCTTAACTTTTGTAGGTT+AGG - chr2_2:64631915-64631934 Msa0264680:intron 30.0%
TGAACTCAATGCAATATGAT+TGG - chr2_2:64631982-64632001 Msa0264680:CDS 30.0%
CACCTATAAGTAGAAATGTA+GGG - chr2_2:64632168-64632187 Msa0264680:CDS 30.0%
AATTAACACAAGCTGTCAAT+TGG - chr2_2:64632409-64632428 Msa0264680:intron 30.0%
GCACCAAAACAAATTATGTT+AGG + chr2_2:64632529-64632548 None:intergenic 30.0%
!! AAAGTAACGGATAACATTGA+CGG + chr2_2:64632993-64633012 None:intergenic 30.0%
CCATAGTAAGACAATCTTTA+AGG + chr2_2:64633573-64633592 None:intergenic 30.0%
CCTTAAAGATTGTCTTACTA+TGG - chr2_2:64633570-64633589 Msa0264680:intron 30.0%
AGATTGTCTTACTATGGATT+TGG - chr2_2:64633576-64633595 Msa0264680:intron 30.0%
CCTCTTCTATTTATCCTTTA+AGG + chr2_2:64633651-64633670 None:intergenic 30.0%
CCTTAAAGGATAAATAGAAG+AGG - chr2_2:64633648-64633667 Msa0264680:intron 30.0%
! GATGAAGATTTTGAACATGA+CGG - chr2_2:64633704-64633723 Msa0264680:intron 30.0%
ATATTCACTCATAAGTGAGT+AGG - chr2_2:64633779-64633798 Msa0264680:intron 30.0%
TATTCACTCATAAGTGAGTA+GGG - chr2_2:64633780-64633799 Msa0264680:intron 30.0%
ACTGTAGTTGAACTATGATT+AGG + chr2_2:64633851-64633870 None:intergenic 30.0%
TAACCTTATGAATTGCATAG+CGG - chr2_2:64634106-64634125 Msa0264680:intron 30.0%
! AATTGTGTCAACATTTTCGA+CGG + chr2_2:64634154-64634173 None:intergenic 30.0%
TGTAAAGTACAAGAGTTCTT+TGG - chr2_2:64634393-64634412 Msa0264680:intron 30.0%
TCACAAATTGTGAAAACTGA+AGG - chr2_2:64634424-64634443 Msa0264680:intron 30.0%
CTTATGTTGGGAAAGAAATA+TGG - chr2_2:64634538-64634557 Msa0264680:intron 30.0%
GAACAAAAGATCTGATCTTG+TGG + chr2_2:64630712-64630731 None:intergenic 35.0%
ATATTCCATCAGCCACATAA+AGG - chr2_2:64630732-64630751 Msa0264680:three_prime_UTR 35.0%
GATAGGTTGTATCCTTTATG+TGG + chr2_2:64630747-64630766 None:intergenic 35.0%
ATACAACCTATCTTTCAGTC+AGG - chr2_2:64630755-64630774 Msa0264680:three_prime_UTR 35.0%
GGGTTTAAAAGGAGAAAACA+AGG + chr2_2:64630850-64630869 None:intergenic 35.0%
AAGTCTAGACATGAGTAACA+CGG + chr2_2:64630905-64630924 None:intergenic 35.0%
TGTTACTCATGTCTAGACTT+AGG - chr2_2:64630905-64630924 Msa0264680:CDS 35.0%
ACTCTCAAGCCATTATGTAT+TGG - chr2_2:64631194-64631213 Msa0264680:intron 35.0%
TATGGGCATGATGATCAAAT+TGG - chr2_2:64631560-64631579 Msa0264680:intron 35.0%
CCTATGCACATAAATATGCT+TGG + chr2_2:64631638-64631657 None:intergenic 35.0%
CCAAGCATATTTATGTGCAT+AGG - chr2_2:64631635-64631654 Msa0264680:intron 35.0%
GCATATTTATGTGCATAGGA+AGG - chr2_2:64631639-64631658 Msa0264680:intron 35.0%
TATTTATGTGCATAGGAAGG+TGG - chr2_2:64631642-64631661 Msa0264680:intron 35.0%
ATTTATGTGCATAGGAAGGT+GGG - chr2_2:64631643-64631662 Msa0264680:intron 35.0%
! CTTAACTTTTGTAGGTTAGG+TGG - chr2_2:64631918-64631937 Msa0264680:intron 35.0%
GTGTATGTCCTATTCCTATA+TGG - chr2_2:64632088-64632107 Msa0264680:CDS 35.0%
TCCTATTCCTATATGGTCTA+TGG - chr2_2:64632095-64632114 Msa0264680:CDS 35.0%
ACCATAGACCATATAGGAAT+AGG + chr2_2:64632099-64632118 None:intergenic 35.0%
CCTACATTTCTACTTATAGG+TGG + chr2_2:64632170-64632189 None:intergenic 35.0%
CCACCTATAAGTAGAAATGT+AGG - chr2_2:64632167-64632186 Msa0264680:CDS 35.0%
GACCCTACATTTCTACTTAT+AGG + chr2_2:64632173-64632192 None:intergenic 35.0%
!! TGTTTTTCAAACATCGTCCA+CGG - chr2_2:64632344-64632363 Msa0264680:intron 35.0%
! AGCTTGTGTTAATTTCTAGG+TGG + chr2_2:64632403-64632422 None:intergenic 35.0%
GACAGCTTGTGTTAATTTCT+AGG + chr2_2:64632406-64632425 None:intergenic 35.0%
!! CAAACTTTTGTGCTACTGTT+GGG + chr2_2:64632631-64632650 None:intergenic 35.0%
CCATAGGAATTTGCAATATG+TGG + chr2_2:64632674-64632693 None:intergenic 35.0%
CCACATATTGCAAATTCCTA+TGG - chr2_2:64632671-64632690 Msa0264680:CDS 35.0%
CATATTGCAAATTCCTATGG+AGG - chr2_2:64632674-64632693 Msa0264680:CDS 35.0%
!! AACTGTTTCTGAAACAGAAC+AGG + chr2_2:64632710-64632729 None:intergenic 35.0%
! AAGTTTTTCTCTGATGGAGA+TGG + chr2_2:64632758-64632777 None:intergenic 35.0%
! CTTGCAAAGTTTTTCTCTGA+TGG + chr2_2:64632764-64632783 None:intergenic 35.0%
!! TTTGCGACTGATTTTCTCAT+GGG - chr2_2:64632785-64632804 Msa0264680:CDS 35.0%
!!! AAGGGTATTGGAGATTGTTT+TGG - chr2_2:64632920-64632939 Msa0264680:intron 35.0%
GGAAGAACAGTTAAAGATGA+AGG - chr2_2:64632941-64632960 Msa0264680:intron 35.0%
ATGAAGGATTTACTTCGCTT+TGG - chr2_2:64632957-64632976 Msa0264680:intron 35.0%
AAACCTGTGTTGGAAAGTAA+CGG + chr2_2:64633006-64633025 None:intergenic 35.0%
ATTTGAAAGGAAACCTGTGT+TGG + chr2_2:64633016-64633035 None:intergenic 35.0%
! CGCTTTGTTGTGTGTTAATT+AGG - chr2_2:64633085-64633104 Msa0264680:intron 35.0%
TTTGCAGGAAATATTGCATC+TGG - chr2_2:64633216-64633235 Msa0264680:intron 35.0%
ATCCAACGAGTAAACAAAGA+CGG + chr2_2:64633265-64633284 None:intergenic 35.0%
AAGAAGACATTGCAATCAGA+TGG - chr2_2:64633369-64633388 Msa0264680:intron 35.0%
ACAGTCCAAAATACAAACCA+CGG + chr2_2:64633449-64633468 None:intergenic 35.0%
ACCAATACGCAGAAAAAATG+TGG - chr2_2:64633615-64633634 Msa0264680:intron 35.0%
CCAATACGCAGAAAAAATGT+GGG - chr2_2:64633616-64633635 Msa0264680:intron 35.0%
ATTCACTCATAAGTGAGTAG+GGG - chr2_2:64633781-64633800 Msa0264680:intron 35.0%
CACTAGTTCAATTTCCGATT+TGG + chr2_2:64633822-64633841 None:intergenic 35.0%
GTAGTTGAACTATGATTAGG+AGG + chr2_2:64633848-64633867 None:intergenic 35.0%
!! TGAAGTCTTGTTTGTTCAAC+CGG + chr2_2:64633941-64633960 None:intergenic 35.0%
GTAACACATTCTGATTGAAC+CGG + chr2_2:64633975-64633994 None:intergenic 35.0%
TTTCCGCTATGCAATTCATA+AGG + chr2_2:64634112-64634131 None:intergenic 35.0%
GTCGAAAATGTTGACACAAT+TGG - chr2_2:64634153-64634172 Msa0264680:intron 35.0%
TGTTGACACAATTGGAGTAT+TGG - chr2_2:64634161-64634180 Msa0264680:intron 35.0%
! AGAAGAATGATGATGACATC+AGG - chr2_2:64634364-64634383 Msa0264680:intron 35.0%
TGCAAGCTATGATAAACTTC+AGG - chr2_2:64634513-64634532 Msa0264680:intron 35.0%
TAAACTTCAGGTGCTTATGT+TGG - chr2_2:64634525-64634544 Msa0264680:intron 35.0%
AAACTTCAGGTGCTTATGTT+GGG - chr2_2:64634526-64634545 Msa0264680:intron 35.0%
TTGGGAAAGAAATATGGTTC+TGG - chr2_2:64634544-64634563 Msa0264680:intron 35.0%
CCATCATCTTATGCTGTATA+AGG + chr2_2:64634598-64634617 None:intergenic 35.0%
CCTTATACAGCATAAGATGA+TGG - chr2_2:64634595-64634614 Msa0264680:intron 35.0%
TGTATCCTTTATGTGGCTGA+TGG + chr2_2:64630740-64630759 None:intergenic 40.0%
ACCTATCTTTCAGTCAGGTT+TGG - chr2_2:64630760-64630779 Msa0264680:three_prime_UTR 40.0%
AAGCTATCACGGAGAACTTA+TGG - chr2_2:64631044-64631063 Msa0264680:CDS 40.0%
GGCTTGAGAGTTGAAAGTAA+GGG + chr2_2:64631185-64631204 None:intergenic 40.0%
TGGCTTGAGAGTTGAAAGTA+AGG + chr2_2:64631186-64631205 None:intergenic 40.0%
TCCCTAGCATACTCTCATAA+GGG - chr2_2:64631355-64631374 Msa0264680:intron 40.0%
!! GAGAGTGTCCTACAAAGTTA+AGG - chr2_2:64631422-64631441 Msa0264680:intron 40.0%
!!! TGTCCGTTCTGGTTTTTGTA+TGG - chr2_2:64631542-64631561 Msa0264680:intron 40.0%
!!! GTCCGTTCTGGTTTTTGTAT+GGG - chr2_2:64631543-64631562 Msa0264680:intron 40.0%
TGCCCATACAAAAACCAGAA+CGG + chr2_2:64631548-64631567 None:intergenic 40.0%
AAGGTGGGTCATATCTCATA+TGG - chr2_2:64631658-64631677 Msa0264680:intron 40.0%
CAAATAGCAGCACATTCATC+AGG + chr2_2:64632060-64632079 None:intergenic 40.0%
CCTATATGGTCTATGGTGAA+CGG - chr2_2:64632102-64632121 Msa0264680:CDS 40.0%
GGATCTAAACGGTAAAGATG+CGG + chr2_2:64632198-64632217 None:intergenic 40.0%
TCTCTGTAAGTAGTAGCTCA+TGG + chr2_2:64632295-64632314 None:intergenic 40.0%
!! AGGTGAAGAAGTGTCACATA+TGG + chr2_2:64632374-64632393 None:intergenic 40.0%
!! AGCACTCAAAGCATTGATGA+TGG - chr2_2:64632586-64632605 Msa0264680:CDS 40.0%
!! CATTGATGATGGCTGATAAG+AGG - chr2_2:64632597-64632616 Msa0264680:CDS 40.0%
! TTTGTGCTACTGTTGGGTAT+TGG + chr2_2:64632625-64632644 None:intergenic 40.0%
!! CCAAACTTTTGTGCTACTGT+TGG + chr2_2:64632632-64632651 None:intergenic 40.0%
CCAACAGTAGCACAAAAGTT+TGG - chr2_2:64632629-64632648 Msa0264680:CDS 40.0%
! AGGTTTTTCTGAACCTCCAT+AGG + chr2_2:64632690-64632709 None:intergenic 40.0%
TGGAACAAACACTGCATTTG+AGG + chr2_2:64632738-64632757 None:intergenic 40.0%
!! CTTTGCGACTGATTTTCTCA+TGG - chr2_2:64632784-64632803 Msa0264680:CDS 40.0%
CAAGATGAGATGATTAAGGC+TGG - chr2_2:64632878-64632897 Msa0264680:intron 40.0%
ATGAGATGATTAAGGCTGGT+AGG - chr2_2:64632882-64632901 Msa0264680:intron 40.0%
CAATCTCCAATACCCTTGTA+AGG + chr2_2:64632917-64632936 None:intergenic 40.0%
! TATCCGTTACTTTCCAACAC+AGG - chr2_2:64633000-64633019 Msa0264680:intron 40.0%
AACTTCAAGCAAGAGAGAGA+TGG - chr2_2:64633180-64633199 Msa0264680:intron 40.0%
AGCAAGAGAGAGATGGATAT+TGG - chr2_2:64633187-64633206 Msa0264680:intron 40.0%
GGATATTGGAAAGTCTTTGC+AGG - chr2_2:64633201-64633220 Msa0264680:intron 40.0%
! TTCCGTCTTTGTTTACTCGT+TGG - chr2_2:64633260-64633279 Msa0264680:intron 40.0%
TTGCAATCAGATGGTATTGC+TGG - chr2_2:64633378-64633397 Msa0264680:intron 40.0%
GGCTTCAATGTTTCAGTTGT+TGG - chr2_2:64633411-64633430 Msa0264680:intron 40.0%
!! GTGTACCGTGGTTTGTATTT+TGG - chr2_2:64633441-64633460 Msa0264680:intron 40.0%
!!! CGTATTGGTTTTGACATGAG+AGG + chr2_2:64633604-64633623 None:intergenic 40.0%
!!! CCCACATTTTTTCTGCGTAT+TGG + chr2_2:64633619-64633638 None:intergenic 40.0%
ATACGCAGAAAAAATGTGGG+AGG - chr2_2:64633619-64633638 Msa0264680:intron 40.0%
! GTGGGAGGTTTTTACCTTAA+AGG - chr2_2:64633634-64633653 Msa0264680:intron 40.0%
AGACTTCAACCAGTTCAATC+CGG - chr2_2:64633953-64633972 Msa0264680:intron 40.0%
AATTTGGACAGATCGCTGTT+TGG + chr2_2:64634011-64634030 None:intergenic 40.0%
CTTCTACGAACAGTGTCTAA+AGG + chr2_2:64634349-64634368 None:intergenic 40.0%
GGTCCAAAATCTCTCTTCAA+AGG - chr2_2:64634445-64634464 Msa0264680:intron 40.0%
!! GCACCTTTGAAGAGAGATTT+TGG + chr2_2:64634451-64634470 None:intergenic 40.0%
! AAATCTCTCTTCAAAGGTGC+TGG - chr2_2:64634451-64634470 Msa0264680:intron 40.0%
!! GGAAAGAAATATGGTTCTGG+TGG - chr2_2:64634547-64634566 Msa0264680:intron 40.0%
GCCAAACCTGACTGAAAGAT+AGG + chr2_2:64630764-64630783 None:intergenic 45.0%
GTCCCTAGCATACTCTCATA+AGG - chr2_2:64631354-64631373 Msa0264680:intron 45.0%
! GCCCTTATGAGAGTATGCTA+GGG + chr2_2:64631359-64631378 None:intergenic 45.0%
! AGCCCTTATGAGAGTATGCT+AGG + chr2_2:64631360-64631379 None:intergenic 45.0%
! ACACATGATGATGTCCGTTC+TGG - chr2_2:64631531-64631550 Msa0264680:intron 45.0%
CCGTTCACCATAGACCATAT+AGG + chr2_2:64632105-64632124 None:intergenic 45.0%
GACTGAGACGGTGACATAAT+TGG + chr2_2:64632256-64632275 None:intergenic 45.0%
ACGTGTTGTCATGACTGAGA+CGG + chr2_2:64632268-64632287 None:intergenic 45.0%
GTGTCACATATGGTATACCG+TGG + chr2_2:64632364-64632383 None:intergenic 45.0%
! TCTGAGCCTTACAAGGGTAT+TGG - chr2_2:64632908-64632927 Msa0264680:intron 45.0%
!! GGATTTACTTCGCTTTGGAG+AGG - chr2_2:64632962-64632981 Msa0264680:intron 45.0%
!! GGTATTGCTGGTCTTTATCG+CGG - chr2_2:64633390-64633409 Msa0264680:intron 45.0%
GTTGGAATCATTGTGTACCG+TGG - chr2_2:64633429-64633448 Msa0264680:intron 45.0%
TTCTCTTAAGCCAGTGCTCT+TGG - chr2_2:64633473-64633492 Msa0264680:intron 45.0%
! GAACGTTTCAGGTAAGAGTG+AGG - chr2_2:64633499-64633518 Msa0264680:intron 45.0%
CTGATTGAACCGGATTGAAC+TGG + chr2_2:64633965-64633984 None:intergenic 45.0%
GGTAGGGGCAGATTAAATCA+TGG - chr2_2:64634058-64634077 Msa0264680:intron 45.0%
! CAACATTTTCGACGGTAGAG+TGG + chr2_2:64634146-64634165 None:intergenic 45.0%
AACTGTAACAGCCCATCCTA+GGG + chr2_2:64634305-64634324 None:intergenic 45.0%
AACATTCTTCGAGCAGTTGC+TGG - chr2_2:64634478-64634497 Msa0264680:intron 45.0%
!! GCGACTGATTTTCTCATGGG+TGG - chr2_2:64632788-64632807 Msa0264680:CDS 50.0%
AGAAGCTTCACGCGCTCAAT+AGG + chr2_2:64632848-64632867 None:intergenic 50.0%
TAGGCTCTCTGAGCCTTACA+AGG - chr2_2:64632901-64632920 Msa0264680:intron 50.0%
AGGCTCTCTGAGCCTTACAA+GGG - chr2_2:64632902-64632921 Msa0264680:intron 50.0%
TCCACCTTTCTTCGTGGACT+TGG + chr2_2:64633316-64633335 None:intergenic 50.0%
GGTGGAGAGAGGCAATTCAA+TGG - chr2_2:64633330-64633349 Msa0264680:intron 50.0%
CTTAAGCCAGTGCTCTTGGT+AGG - chr2_2:64633477-64633496 Msa0264680:intron 50.0%
! AACGTTCCTACCAAGAGCAC+TGG + chr2_2:64633486-64633505 None:intergenic 50.0%
GCTCTTGGTAGGAACGTTTC+AGG - chr2_2:64633488-64633507 Msa0264680:intron 50.0%
!! TTCCTAGCTAGCTTTGCCCT+AGG - chr2_2:64634286-64634305 Msa0264680:intron 50.0%
ATCCTAGGGCAAAGCTAGCT+AGG + chr2_2:64634291-64634310 None:intergenic 50.0%
!! TAGCTAGCTTTGCCCTAGGA+TGG - chr2_2:64634290-64634309 Msa0264680:intron 50.0%
!! AGCTAGCTTTGCCCTAGGAT+GGG - chr2_2:64634291-64634310 Msa0264680:intron 50.0%
CAACTGTAACAGCCCATCCT+AGG + chr2_2:64634306-64634325 None:intergenic 50.0%
!! CTAGGATGGGCTGTTACAGT+TGG - chr2_2:64634304-64634323 Msa0264680:intron 50.0%
!! ATTGCATCTGGTGCTGCAGC+AGG - chr2_2:64633228-64633247 Msa0264680:intron 55.0%
GACGCCAAGTCCACGAAGAA+AGG - chr2_2:64633309-64633328 Msa0264680:intron 55.0%
GCCAAGTCCACGAAGAAAGG+TGG - chr2_2:64633312-64633331 Msa0264680:intron 55.0%
CCTCTCTCCACCTTTCTTCG+TGG + chr2_2:64633322-64633341 None:intergenic 55.0%
CCACGAAGAAAGGTGGAGAG+AGG - chr2_2:64633319-64633338 Msa0264680:intron 55.0%
TTCGACGGTAGAGTGGCTTG+AGG + chr2_2:64634139-64634158 None:intergenic 55.0%
TGGACTTGGCGTCGCTTGCA+AGG + chr2_2:64633302-64633321 None:intergenic 60.0%
CTTCGAGCAGTTGCTGGTGC+TGG - chr2_2:64634484-64634503 Msa0264680:intron 60.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 64630685 64634756 64630685 ID=Msa0264680;Name=Msa0264680
chr2_2 mRNA 64630685 64634756 64630685 ID=Msa0264680-mRNA-1;Parent=Msa0264680;Name=Msa0264680-mRNA-1;_AED=0.04;_eAED=0.04;_QI=136|1|1|1|0.66|0.5|4|180|362
chr2_2 exon 64630685 64631161 64630685 ID=Msa0264680-mRNA-1:exon:20248;Parent=Msa0264680-mRNA-1
chr2_2 exon 64631932 64632303 64631932 ID=Msa0264680-mRNA-1:exon:20247;Parent=Msa0264680-mRNA-1
chr2_2 exon 64632420 64632883 64632420 ID=Msa0264680-mRNA-1:exon:20246;Parent=Msa0264680-mRNA-1
chr2_2 exon 64634665 64634756 64634665 ID=Msa0264680-mRNA-1:exon:20245;Parent=Msa0264680-mRNA-1
chr2_2 five_prime_UTR 64634665 64634756 64634665 ID=Msa0264680-mRNA-1:five_prime_utr;Parent=Msa0264680-mRNA-1
chr2_2 five_prime_UTR 64632840 64632883 64632840 ID=Msa0264680-mRNA-1:five_prime_utr;Parent=Msa0264680-mRNA-1
chr2_2 CDS 64632420 64632839 64632420 ID=Msa0264680-mRNA-1:cds;Parent=Msa0264680-mRNA-1
chr2_2 CDS 64631932 64632303 64631932 ID=Msa0264680-mRNA-1:cds;Parent=Msa0264680-mRNA-1
chr2_2 CDS 64630865 64631161 64630865 ID=Msa0264680-mRNA-1:cds;Parent=Msa0264680-mRNA-1
chr2_2 three_prime_UTR 64630685 64630864 64630685 ID=Msa0264680-mRNA-1:three_prime_utr;Parent=Msa0264680-mRNA-1
Gene Sequence

>Msa0264680

ATGATGGCTGATAAGAGGCACCAATACCCAACAGTAGCACAAAAGTTTGGTCTAAGATCAAATCTTTCTCCACATATTGCAAATTCCTATGGAGGTTCAGAAAAACCTGTTCTGTTTCAGAAACAGTTTTCATCCTCAAATGCAGTGTTTGTTCCATCTCCATCAGAGAAAAACTTTGCAAGCTTTGCGACTGATTTTCTCATGGGTGGAGTTTCTGCAGCAGTGTCAAAATCAGCAGCAGCTCCTATTGAGCGCGTGAAGCTTCTGATTCAAAATCAAGATGAGATGATTAAGGCTGGTAGGCTCTCTGAGCCTTACAAGGGTATTGGAGATTGTTTTGGAAGAACAGTTAAAGATGAAGGATTTACTTCGCTTTGGAGAGGAAACACCGTCAATGTTATCCGTTACTTTCCAACACAGGCATTCAACTTTGCATTCAAAGACTACTTTAAGAAGCTATTTAACTTCAAGCAAGAGAGAGATGGATATTGGAAAGTCTTTGCAGGAAATATTGCATCTGGTGCTGCAGCAGGAGCTTCATCTTCCGTCTTTGTTTACTCGTTGGATTATGCTCGAACTCGCCTTGCAAGCGACGCCAAGTCCACGAAGAAAGGTGGAGAGAGGCAATTCAATGGCTTGATTGATGTCTACAAGAAGACATTGCAATCAGATGGTATTGCTGGTCTTTATCGCGGCTTCAATGTTTCAGTTGTTGGAATCATTGTGTACCGTGGTTTGTATTTTGGACTGTATGATTCTCTTAAGCCAGTGCTCTTGGTAGGAACGTTTCAGGATAGTTTCCTAGCTAGCTTTGCCCTAGGATGGGCTGTTACAGTTGGTGCTAGTGTAGCATCTTATCCTTTAGACACTGTTCGTAGAAGAATGATGATGACATCAGGTGAAGCTGTAAAGTACAAGAGTTCTTTGGATGCTTTCTCACAAATTGTGAAAACTGAAGGTCCAAAATCTCTCTTCAAAGGTGCTGGTGCAAACATTCTTCGAGCAGTTGCTGGTGCTGGTGTGCTTGCAAGCTATGATAAACTTCAGGTGCTTATGTTGGGAAAGAAATATGGTTCTGGTGGAGCTTAA

Protein sequence

>Msa0264680

MMADKRHQYPTVAQKFGLRSNLSPHIANSYGGSEKPVLFQKQFSSSNAVFVPSPSEKNFASFATDFLMGGVSAAVSKSAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFGRTVKDEGFTSLWRGNTVNVIRYFPTQAFNFAFKDYFKKLFNFKQERDGYWKVFAGNIASGAAAGASSSVFVYSLDYARTRLASDAKSTKKGGERQFNGLIDVYKKTLQSDGIAGLYRGFNVSVVGIIVYRGLYFGLYDSLKPVLLVGTFQDSFLASFALGWAVTVGASVASYPLDTVRRRMMMTSGEAVKYKSSLDAFSQIVKTEGPKSLFKGAGANILRAVAGAGVLASYDKLQVLMLGKKYGSGGA*