AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1225580


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1225580 MtrunA17_Chr2g0328891 97.790 362 8 0 1 362 1 362 0.0 720
Msa1225580 MtrunA17_Chr3g0088301 73.389 357 92 2 7 362 35 389 0.0 519
Msa1225580 MtrunA17_Chr4g0040341 72.118 373 88 3 2 361 1 370 0.0 514
Msa1225580 MtrunA17_Chr8g0352031 73.481 362 87 3 8 362 6 365 6.07e-180 503
Msa1225580 MtrunA17_Chr8g0393031 58.947 285 117 0 65 349 17 301 1.05e-126 366
Msa1225580 MtrunA17_Chr3g0135801 40.260 308 172 7 55 355 23 325 3.53e-71 225
Msa1225580 MtrunA17_Chr5g0396801 31.013 316 165 11 54 336 26 321 3.57e-35 131
Msa1225580 MtrunA17_Chr5g0396801 24.876 201 134 4 69 258 144 338 1.28e-11 65.1
Msa1225580 MtrunA17_Chr3g0135861 30.573 314 180 10 62 352 31 329 4.77e-35 131
Msa1225580 MtrunA17_Chr6g0488081 28.094 299 194 6 62 349 15 303 3.90e-34 128
Msa1225580 MtrunA17_Chr8g0347451 31.847 314 157 12 59 336 44 336 2.35e-33 127
Msa1225580 MtrunA17_Chr1g0149111 29.643 280 173 8 66 341 139 398 1.23e-30 120
Msa1225580 MtrunA17_Chr1g0149111 27.962 211 127 5 54 259 221 411 1.39e-16 80.5
Msa1225580 MtrunA17_Chr3g0137941 28.814 295 175 10 69 353 125 394 5.19e-30 119
Msa1225580 MtrunA17_Chr3g0137941 26.941 219 141 4 43 259 193 394 1.75e-17 83.2
Msa1225580 MtrunA17_Chr3g0137941 29.189 185 111 5 171 349 122 292 1.70e-13 71.2
Msa1225580 MtrunA17_Chr7g0240341 29.097 299 195 8 64 352 23 314 1.34e-29 116
Msa1225580 MtrunA17_Chr4g0006851 31.724 290 175 8 66 352 89 358 1.08e-28 114
Msa1225580 MtrunA17_Chr4g0063561 25.839 298 186 8 66 353 123 395 1.07e-26 109
Msa1225580 MtrunA17_Chr4g0063561 27.488 211 131 4 52 259 204 395 4.79e-17 81.6
Msa1225580 MtrunA17_Chr7g0242311 31.047 277 160 8 77 346 98 350 1.61e-26 108
Msa1225580 MtrunA17_Chr5g0436041 27.097 310 206 8 52 352 23 321 4.96e-26 106
Msa1225580 MtrunA17_Chr8g0385571 27.500 280 183 7 66 341 227 490 1.08e-23 102
Msa1225580 MtrunA17_Chr2g0296061 28.013 307 186 9 69 346 18 318 1.77e-23 99.4
Msa1225580 MtrunA17_Chr7g0252401 28.421 285 171 8 66 341 207 467 1.40e-22 98.6
Msa1225580 MtrunA17_Chr3g0131501 27.576 330 205 13 22 341 163 468 1.48e-22 98.6
Msa1225580 MtrunA17_Chr4g0067231 26.074 326 202 9 54 348 4 321 5.95e-22 95.1
Msa1225580 MtrunA17_Chr4g0000261 25.085 295 185 7 65 341 65 341 5.85e-20 90.1
Msa1225580 MtrunA17_Chr7g0241521 24.164 269 195 5 61 327 12 273 2.80e-19 87.0
Msa1225580 MtrunA17_Chr3g0133111 26.481 287 178 9 66 327 6 284 1.17e-18 85.5
Msa1225580 MtrunA17_Chr3g0133111 27.347 245 144 9 7 233 57 285 9.05e-12 65.5
Msa1225580 MtrunA17_Chr3g0115801 27.273 297 168 11 69 341 119 391 6.52e-18 84.3
Msa1225580 MtrunA17_Chr4g0008061 25.166 302 204 9 57 353 6 290 1.22e-17 82.4
Msa1225580 MtrunA17_Chr1g0196921 22.015 268 197 4 64 327 12 271 3.44e-17 81.3
Msa1225580 MtrunA17_Chr1g0196921 29.762 168 110 4 67 233 112 272 1.42e-14 73.6
Msa1225580 MtrunA17_Chr4g0028531 25.592 211 136 5 67 271 116 311 1.02e-15 77.0
Msa1225580 MtrunA17_Chr6g0463041 25.792 221 128 5 164 349 18 237 1.31e-15 75.9
Msa1225580 MtrunA17_Chr6g0488341 25.105 239 158 6 115 349 7 228 2.33e-15 74.7
Msa1225580 MtrunA17_Chr4g0004571 25.833 240 162 6 115 346 55 286 5.78e-15 74.7
Msa1225580 MtrunA17_Chr4g0004571 25.114 219 153 4 34 252 79 286 6.05e-13 68.9
Msa1225580 MtrunA17_Chr2g0331771 23.776 286 201 6 65 346 155 427 1.40e-14 74.7
Msa1225580 MtrunA17_Chr5g0411411 24.832 298 198 9 63 346 6 291 2.98e-14 72.4
Msa1225580 MtrunA17_Chr8g0382201 24.662 296 177 10 69 341 198 470 4.10e-14 73.6
Msa1225580 MtrunA17_Chr5g0412401 21.993 291 195 6 66 327 6 293 7.83e-14 71.6
Msa1225580 MtrunA17_Chr8g0366791 24.915 293 204 7 63 346 6 291 1.05e-13 70.9
Msa1225580 MtrunA17_Chr3g0103681 23.611 288 204 6 53 334 2 279 1.70e-13 70.5
Msa1225580 MtrunA17_Chr3g0103681 27.861 201 127 5 167 353 11 207 1.39e-11 64.7
Msa1225580 MtrunA17_Chr8g0367641 32.558 129 80 3 106 233 165 287 4.94e-12 66.2
Msa1225580 MtrunA17_Chr8g0367641 21.959 296 196 8 66 334 6 293 6.17e-11 62.8
Msa1225580 MtrunA17_Chr7g0219891 28.185 259 148 11 117 351 65 309 1.34e-11 64.7
Msa1225580 MtrunA17_Chr3g0126331 25.442 283 162 11 106 356 125 390 5.58e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1225580 AT5G13490.1 71.279 383 85 3 5 362 3 385 0.0 528
Msa1225580 AT5G13490.2 71.279 383 85 3 5 362 3 385 0.0 528
Msa1225580 AT3G08580.2 72.032 379 79 5 8 362 6 381 0.0 517
Msa1225580 AT3G08580.1 72.032 379 79 5 8 362 6 381 0.0 517
Msa1225580 AT4G28390.1 77.101 345 71 2 17 361 42 378 0.0 515
Msa1225580 AT4G28390.2 77.101 345 71 2 17 361 42 378 0.0 515
Msa1225580 AT5G17400.1 62.500 288 108 0 62 349 10 297 1.19e-131 379
Msa1225580 AT5G56450.1 38.710 310 171 7 52 349 20 322 5.21e-67 214
Msa1225580 AT3G55640.1 28.618 304 200 7 56 350 28 323 1.19e-35 133
Msa1225580 AT3G55640.4 28.618 304 200 7 56 350 28 323 1.19e-35 133
Msa1225580 AT2G37890.1 29.630 297 192 7 65 352 44 332 9.07e-34 128
Msa1225580 AT3G53940.1 31.544 298 183 9 66 352 73 360 3.71e-33 127
Msa1225580 AT1G14560.1 28.470 281 175 6 77 341 38 308 1.60e-31 122
Msa1225580 AT1G14560.2 28.727 275 170 6 77 335 38 302 6.26e-31 119
Msa1225580 AT4G26180.1 30.492 305 186 10 62 352 17 309 6.50e-31 120
Msa1225580 AT4G01100.1 30.255 314 162 11 59 336 35 327 1.41e-30 119
Msa1225580 AT4G01100.1 24.878 205 131 6 69 258 148 344 1.31e-11 65.5
Msa1225580 AT5G01500.1 32.616 279 165 9 77 352 130 388 2.30e-30 120
Msa1225580 AT4G26180.2 31.359 287 172 9 62 335 17 291 3.82e-30 117
Msa1225580 AT3G51870.1 32.155 283 161 11 77 352 102 360 1.03e-28 115
Msa1225580 AT4G01100.2 29.467 319 172 11 59 336 35 341 1.43e-28 114
Msa1225580 AT4G01100.2 24.878 205 131 6 69 258 162 358 1.59e-11 65.5
Msa1225580 AT4G32400.1 30.605 281 169 10 66 341 114 373 2.34e-28 114
Msa1225580 AT4G32400.1 28.571 196 120 5 67 259 208 386 1.13e-13 72.0
Msa1225580 AT4G32400.1 28.962 183 114 5 171 349 114 284 3.32e-12 67.8
Msa1225580 AT4G01100.3 29.373 303 157 11 75 341 1 282 3.62e-27 109
Msa1225580 AT4G01100.3 24.878 205 131 6 69 258 98 294 9.75e-12 65.5
Msa1225580 AT3G21390.1 28.065 310 184 8 69 346 22 324 2.12e-24 102
Msa1225580 AT3G21390.2 28.065 310 184 8 69 346 44 346 2.98e-24 102
Msa1225580 AT3G20240.1 24.916 297 187 7 63 341 49 327 3.00e-24 102
Msa1225580 AT5G48970.1 27.097 310 188 8 69 346 25 328 9.77e-24 100
Msa1225580 AT1G14560.3 30.500 200 121 5 170 352 24 222 4.76e-23 96.7
Msa1225580 AT5G51050.1 28.485 330 199 12 22 341 181 483 2.02e-22 98.6
Msa1225580 AT3G55640.2 26.786 224 151 4 56 274 28 243 6.56e-22 94.0
Msa1225580 AT3G55640.3 26.786 224 151 4 56 274 28 243 6.56e-22 94.0
Msa1225580 AT3G53940.2 31.401 207 126 5 66 266 73 269 1.55e-20 90.9
Msa1225580 AT5G61810.2 26.335 281 177 8 66 341 65 320 2.26e-20 91.3
Msa1225580 AT5G61810.1 26.335 281 177 8 66 341 208 463 8.31e-20 90.9
Msa1225580 AT5G48970.2 27.165 254 154 6 118 346 10 257 1.99e-19 87.4
Msa1225580 AT3G54110.1 24.759 311 204 9 57 357 6 296 2.99e-19 87.4
Msa1225580 AT5G07320.1 25.926 270 174 7 75 341 218 464 5.49e-19 88.6
Msa1225580 AT5G58970.1 23.656 279 198 6 61 334 11 279 2.22e-17 82.0
Msa1225580 AT5G58970.1 29.949 197 119 7 167 349 12 203 1.06e-13 71.6
Msa1225580 AT5G64970.1 26.014 296 173 10 69 341 138 410 7.42e-16 79.0
Msa1225580 AT1G79900.1 28.870 239 147 7 115 346 55 277 2.35e-15 76.3
Msa1225580 AT5G64970.2 26.351 296 172 11 69 341 14 286 3.50e-15 75.9
Msa1225580 AT1G14140.1 23.704 270 199 4 60 327 10 274 3.97e-15 75.5
Msa1225580 AT1G14140.1 28.283 198 124 6 171 356 18 209 8.82e-13 68.6
Msa1225580 AT5G09470.1 27.727 220 143 6 114 327 97 306 4.52e-15 75.9
Msa1225580 AT5G64970.3 26.644 289 166 10 69 334 138 403 4.65e-15 76.3
Msa1225580 AT1G78180.1 25.333 300 170 8 69 341 131 403 2.55e-14 74.3
Msa1225580 AT5G58970.2 29.949 197 119 6 167 349 12 203 9.86e-14 71.2
Msa1225580 AT4G27940.1 23.438 256 178 6 106 345 146 399 1.13e-13 72.0
Msa1225580 AT5G66380.1 29.146 199 119 5 170 356 9 197 1.23e-13 71.2
Msa1225580 AT4G03115.1 23.592 284 171 9 59 327 31 283 5.53e-13 69.3
Msa1225580 AT4G03115.3 23.592 284 171 9 59 327 63 315 6.84e-13 69.3
Msa1225580 AT5G46800.2 25.753 299 193 9 65 346 7 293 2.45e-12 67.4
Msa1225580 AT5G46800.3 25.753 299 193 9 65 346 7 293 2.45e-12 67.4
Msa1225580 AT5G46800.1 25.753 299 193 9 65 346 7 293 2.45e-12 67.4
Msa1225580 AT2G22500.1 25.000 288 179 8 66 327 6 282 3.09e-12 67.0
Msa1225580 AT2G33820.4 28.723 188 118 6 162 341 13 192 6.48e-12 65.9
Msa1225580 AT1G25380.1 22.845 232 160 7 117 339 71 292 1.25e-11 65.9
Msa1225580 AT1G25380.1 28.977 176 113 4 184 352 34 204 1.90e-11 65.1
Msa1225580 AT1G25380.2 22.845 232 160 7 117 339 71 292 1.25e-11 65.9
Msa1225580 AT1G25380.2 28.977 176 113 4 184 352 34 204 1.90e-11 65.1
Msa1225580 AT2G33820.1 21.382 304 222 7 62 356 14 309 2.29e-11 64.7
Msa1225580 AT1G34065.1 22.876 306 181 10 39 333 54 315 8.52e-11 63.2
Msa1225580 AT1G34065.2 22.876 306 181 10 39 333 47 308 9.79e-11 62.8

Find 80 sgRNAs with CRISPR-Local

Find 225 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATAGGTTGTATCCTTTATT+TGG 0.172758 8_1:-91036624 None:intergenic
GCACCTTTGAAGAGAGATTT+TGG 0.201047 8_1:-91040323 None:intergenic
CCATCATCTTATGCTGTATA+AGG 0.215845 8_1:-91040470 None:intergenic
GTGTACCGTGGTTTGTATTT+TGG 0.236923 8_1:+91039316 Msa1225580:CDS
GCTCTTGGTAGGAACGTTTC+AGG 0.238857 8_1:+91039363 Msa1225580:CDS
CTTATGTTGGGAAAGAAATA+TGG 0.285268 8_1:+91040413 Msa1225580:CDS
TCCACCTTTCTTCGTGGACT+TGG 0.300851 8_1:-91039188 None:intergenic
AAGGGTATTGGAGATTGTTT+TGG 0.320804 8_1:+91038795 Msa1225580:CDS
CCTCTCTCCACCTTTCTTCG+TGG 0.345988 8_1:-91039194 None:intergenic
AGCAAGAGAGAGATGGATAT+TGG 0.356655 8_1:+91039062 Msa1225580:CDS
GGCTTCAATGTTTCAGTTGT+TGG 0.362007 8_1:+91039286 Msa1225580:CDS
TGTAAAGTACAAGAGTTCTT+TGG 0.375179 8_1:+91040268 Msa1225580:CDS
AAATCAAGATGAGATGATTA+AGG 0.376906 8_1:+91038749 Msa1225580:CDS
ATGAAGGATTTACTTCGCTT+TGG 0.383588 8_1:+91038832 Msa1225580:CDS
AGAAGCTTCACGCGCTCAAT+AGG 0.386608 8_1:-91038720 None:intergenic
TTTGTGCTACTGTTGGGTAT+TGG 0.390598 8_1:-91038497 None:intergenic
AACTGTTTCTGAAACAGAAC+AGG 0.406642 8_1:-91038582 None:intergenic
CTTCGAGCAGTTGCTGGTGC+TGG 0.406961 8_1:+91040359 Msa1225580:CDS
TTCCGTCTTTGTTTACTCGT+TGG 0.409566 8_1:+91039135 Msa1225580:CDS
TTGCAATCAGATGGTATTGC+TGG 0.410642 8_1:+91039253 Msa1225580:CDS
AACATTCTTCGAGCAGTTGC+TGG 0.413671 8_1:+91040353 Msa1225580:CDS
TGCAAGCTATGATAAACTTC+AGG 0.423170 8_1:+91040388 Msa1225580:CDS
GGAAGAACAGTTAAAGATGA+AGG 0.423659 8_1:+91038816 Msa1225580:CDS
CCACATATTGCAAATTCCTA+TGG 0.426920 8_1:+91038546 Msa1225580:CDS
AAACTTCAGGTGCTTATGTT+GGG 0.430704 8_1:+91040401 Msa1225580:CDS
TAGCTAGCTTTGCCCTAGGA+TGG 0.434987 8_1:+91040165 Msa1225580:CDS
CCAACAGTAGCACAAAAGTT+TGG 0.442652 8_1:+91038504 Msa1225580:CDS
GGATATTGGAAAGTCTTTGC+AGG 0.443053 8_1:+91039076 Msa1225580:CDS
TTCTCTTAAGCCAGTGCTCT+TGG 0.444590 8_1:+91039348 Msa1225580:CDS
CAACTGTAACAGCCCATCCT+AGG 0.444717 8_1:-91040178 None:intergenic
TCTGAGCCTTACAAGGGTAT+TGG 0.448802 8_1:+91038783 Msa1225580:CDS
ATTGCATCTGGTGCTGCAGC+AGG 0.453223 8_1:+91039103 Msa1225580:CDS
ATATTCCATCAGCCAAATAA+AGG 0.461799 8_1:+91036612 Msa1225580:five_prime_UTR
TTGGGAAAGAAATATGGTTC+TGG 0.461893 8_1:+91040419 Msa1225580:CDS
TGGAACAAACACTGCATTTG+AGG 0.462013 8_1:-91038610 None:intergenic
TTTGCAGGAAATATTGCATC+TGG 0.462558 8_1:+91039091 Msa1225580:CDS
TGTATCCTTTATTTGGCTGA+TGG 0.465555 8_1:-91036617 None:intergenic
GCCAAACCTGACTGAAAGAT+AGG 0.471436 8_1:-91036641 None:intergenic
TGGACTTGGCGTCGCTTGCA+AGG 0.475415 8_1:-91039174 None:intergenic
CAATCTCCAATACCCTTGTA+AGG 0.475979 8_1:-91038789 None:intergenic
AGCTAGCTTTGCCCTAGGAT+GGG 0.478146 8_1:+91040166 Msa1225580:CDS
ATACAACCTATCTTTCAGTC+AGG 0.481381 8_1:+91036635 Msa1225580:five_prime_UTR
AAATCTCTCTTCAAAGGTGC+TGG 0.485223 8_1:+91040326 Msa1225580:CDS
TAAACTTCAGGTGCTTATGT+TGG 0.486307 8_1:+91040400 Msa1225580:CDS
CCATAGGAATTTGCAATATG+TGG 0.487479 8_1:-91038546 None:intergenic
CATTGATGATGGCTGATAAG+AGG 0.495678 8_1:+91038472 Msa1225580:exon
GACGCCAAGTCCACGAAGAA+AGG 0.496546 8_1:+91039184 Msa1225580:CDS
TTCCTAGCTAGCTTTGCCCT+AGG 0.508251 8_1:+91040161 Msa1225580:CDS
TAGGCTCTCTGAGCCTTACA+AGG 0.509331 8_1:+91038776 Msa1225580:CDS
AGAAGAATGATGATGACATC+AGG 0.514497 8_1:+91040239 Msa1225580:CDS
ATTTGAAAGGAAACCTGTGT+TGG 0.521968 8_1:-91038888 None:intergenic
TCACAAATTGTGAAAACTGA+AGG 0.528718 8_1:+91040299 Msa1225580:CDS
CTTCTACGAACAGTGTCTAA+AGG 0.537254 8_1:-91040221 None:intergenic
ATCCTAGGGCAAAGCTAGCT+AGG 0.537911 8_1:-91040163 None:intergenic
CTTAAGCCAGTGCTCTTGGT+AGG 0.545019 8_1:+91039352 Msa1225580:CDS
GGTCCAAAATCTCTCTTCAA+AGG 0.557932 8_1:+91040320 Msa1225580:CDS
CAAGATGAGATGATTAAGGC+TGG 0.558576 8_1:+91038753 Msa1225580:CDS
CCTTATACAGCATAAGATGA+TGG 0.560896 8_1:+91040470 Msa1225580:three_prime_UTR
GGTGGAGAGAGGCAATTCAA+TGG 0.564939 8_1:+91039205 Msa1225580:CDS
AACTTCAAGCAAGAGAGAGA+TGG 0.570273 8_1:+91039055 Msa1225580:CDS
CTAGGATGGGCTGTTACAGT+TGG 0.574759 8_1:+91040179 Msa1225580:CDS
AGCACTCAAAGCATTGATGA+TGG 0.577209 8_1:+91038461 Msa1225580:exon
CATATTGCAAATTCCTATGG+AGG 0.577721 8_1:+91038549 Msa1225580:CDS
GAACAAAAGATCTGATCTTG+TGG 0.579459 8_1:-91036589 None:intergenic
GGAAAGAAATATGGTTCTGG+TGG 0.583008 8_1:+91040422 Msa1225580:CDS
AAACCTGTGTTGGAAAGTAA+CGG 0.584984 8_1:-91038878 None:intergenic
ATGAGATGATTAAGGCTGGT+AGG 0.586726 8_1:+91038757 Msa1225580:CDS
AAGAAGACATTGCAATCAGA+TGG 0.590470 8_1:+91039244 Msa1225580:CDS
AACTGTAACAGCCCATCCTA+GGG 0.595417 8_1:-91040177 None:intergenic
GGATTTACTTCGCTTTGGAG+AGG 0.595722 8_1:+91038837 Msa1225580:CDS
AAAGTAACGGATAACATTGA+CGG 0.603182 8_1:-91038865 None:intergenic
GCCAAGTCCACGAAGAAAGG+TGG 0.603618 8_1:+91039187 Msa1225580:CDS
GGTATTGCTGGTCTTTATCG+CGG 0.608830 8_1:+91039265 Msa1225580:CDS
AACGTTCCTACCAAGAGCAC+TGG 0.609300 8_1:-91039358 None:intergenic
ATCCAACGAGTAAACAAAGA+CGG 0.620833 8_1:-91039137 None:intergenic
TATCCGTTACTTTCCAACAC+AGG 0.620843 8_1:+91038875 Msa1225580:CDS
CCACGAAGAAAGGTGGAGAG+AGG 0.629455 8_1:+91039194 Msa1225580:CDS
ACAGTCCAAAATACAAACCA+CGG 0.665396 8_1:-91039321 None:intergenic
GTTGGAATCATTGTGTACCG+TGG 0.672437 8_1:+91039304 Msa1225580:CDS
AGGCTCTCTGAGCCTTACAA+GGG 0.675743 8_1:+91038777 Msa1225580:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTGAAATATTCATAATTTT+CGG - chr8_1:91037162-91037181 None:intergenic 10.0%
!! AAATTATGAATATTTCAAAA+AGG + chr8_1:91037163-91037182 Msa1225580:intron 10.0%
!!! AACAAAAAAACTAAATTTTA+AGG - chr8_1:91038094-91038113 None:intergenic 10.0%
!!! AAATTTTTAAAATATTGGTA+GGG + chr8_1:91039917-91039936 Msa1225580:intron 10.0%
!!! ATATTATTTTACAAAATATC+AGG + chr8_1:91040133-91040152 Msa1225580:intron 10.0%
!!! AAATTGATTATTTTTTTCTT+TGG + chr8_1:91040524-91040543 Msa1225580:three_prime_UTR 10.0%
!!! TTGAAATATTCATAATTTTC+GGG - chr8_1:91037161-91037180 None:intergenic 15.0%
!! TAATTATGTTATGTACTTTA+AGG - chr8_1:91038380-91038399 None:intergenic 15.0%
!! TATATTAAAAAGTAGAAAAC+CGG + chr8_1:91039794-91039813 Msa1225580:intron 15.0%
!!! TCGTCAAATTTTTAAAATAT+TGG + chr8_1:91039912-91039931 Msa1225580:intron 15.0%
!!! CAAATTTTTAAAATATTGGT+AGG + chr8_1:91039916-91039935 Msa1225580:intron 15.0%
!!! AATTTTTAAAATATTGGTAG+GGG + chr8_1:91039918-91039937 Msa1225580:intron 15.0%
!! TCATATTAAATCATACTCAA+GGG - chr8_1:91036750-91036769 None:intergenic 20.0%
!! TTCATATTAAATCATACTCA+AGG - chr8_1:91036751-91036770 None:intergenic 20.0%
!!! ATTAAGTTGTTTATTCAAAC+TGG - chr8_1:91036812-91036831 None:intergenic 20.0%
!! AAAGTTAAGGACAAATTTAA+TGG + chr8_1:91037315-91037334 Msa1225580:intron 20.0%
!! TATTATTATAGTGAAAAGGT+TGG - chr8_1:91037496-91037515 None:intergenic 20.0%
!! TGGTTATTATTATAGTGAAA+AGG - chr8_1:91037500-91037519 None:intergenic 20.0%
!!! GGCTGATTTATTTTAATATA+TGG + chr8_1:91037821-91037840 Msa1225580:intron 20.0%
!!! CTAAATTTTAAGGATCTAAA+CGG - chr8_1:91038084-91038103 None:intergenic 20.0%
!! TAAGGAAATAATGAAAACTT+AGG - chr8_1:91038362-91038381 None:intergenic 20.0%
!!! ACTGCATTAATTATTTCTTT+AGG + chr8_1:91038916-91038935 Msa1225580:intron 20.0%
!! TAACATGATTAATCTATTAC+AGG + chr8_1:91038991-91039010 Msa1225580:intron 20.0%
!! AAAGAGAAAAAAGTTAGTTA+AGG + chr8_1:91039557-91039576 Msa1225580:intron 20.0%
!! AATTTGACGAAACAAAAATT+TGG - chr8_1:91039902-91039921 None:intergenic 20.0%
!!! ATAGTTTGCTGAATATTTTT+TGG + chr8_1:91040576-91040595 Msa1225580:three_prime_UTR 20.0%
!! ACAATTTTTACAAGCTATCA+CGG + chr8_1:91036913-91036932 Msa1225580:intron 25.0%
! CCTTTAATTCCAATACATAA+TGG - chr8_1:91037086-91037105 None:intergenic 25.0%
! CCATTATGTATTGGAATTAA+AGG + chr8_1:91037083-91037102 Msa1225580:intron 25.0%
! TTTGTGAAATGCTTTCAAAT+AGG + chr8_1:91037134-91037153 Msa1225580:intron 25.0%
!!! TCTCAAATAAAAAAGGTATC+TGG - chr8_1:91037286-91037305 None:intergenic 25.0%
! AAATTTGTCCTTAACTTTGT+AGG - chr8_1:91037313-91037332 None:intergenic 25.0%
!!! TTTGAACATAGTGTTTTAGT+AGG + chr8_1:91037356-91037375 Msa1225580:intron 25.0%
!!! AACTTTTCAGATTTCAAGTT+CGG - chr8_1:91037393-91037412 None:intergenic 25.0%
!! TAGTGACATATATGTTTCTA+AGG + chr8_1:91037570-91037589 Msa1225580:intron 25.0%
!! TGTTATTTGAACAACCAATT+TGG + chr8_1:91037623-91037642 Msa1225580:intron 25.0%
!!! ACTTTTTCCTTTGTAAAGTA+TGG - chr8_1:91037667-91037686 None:intergenic 25.0%
! ATACTTTACAAAGGAAAAAG+TGG + chr8_1:91037666-91037685 Msa1225580:intron 25.0%
!! TCATTTCTCTTAACTTTTGT+AGG + chr8_1:91037792-91037811 Msa1225580:intron 25.0%
!! AGTCATATCGTTGAATTTTA+AGG + chr8_1:91037915-91037934 Msa1225580:intron 25.0%
!!! TAATTTCTAGGTGGATTATA+AGG - chr8_1:91038269-91038288 None:intergenic 25.0%
!!! TAGCCTAACATAATTTGTTT+TGG + chr8_1:91038398-91038417 Msa1225580:intron 25.0%
! AAATCAAGATGAGATGATTA+AGG + chr8_1:91038749-91038768 Msa1225580:CDS 25.0%
! AATGCAGTTGAAAATTTGAA+AGG - chr8_1:91038904-91038923 None:intergenic 25.0%
! CGAAAATGTAATTTAGACAT+TGG - chr8_1:91038942-91038961 None:intergenic 25.0%
! AGATTAATCATGTTAGACAT+TGG - chr8_1:91038986-91039005 None:intergenic 25.0%
!!! CGATGTTTTAAAATCCAAAT+CGG + chr8_1:91039680-91039699 Msa1225580:intron 25.0%
! AATCAGAATGTGTTACAATT+AGG + chr8_1:91039854-91039873 Msa1225580:intron 25.0%
!!! TATTTTAGAGCAGCAAATTT+TGG - chr8_1:91040116-91040135 None:intergenic 25.0%
ATATTCCATCAGCCAAATAA+AGG + chr8_1:91036612-91036631 Msa1225580:five_prime_UTR 30.0%
GATAGGTTGTATCCTTTATT+TGG - chr8_1:91036627-91036646 None:intergenic 30.0%
CATGTAACTTAACACAAACA+TGG - chr8_1:91036695-91036714 None:intergenic 30.0%
ATCATACTCAAGGGTTTAAA+AGG - chr8_1:91036741-91036760 None:intergenic 30.0%
! GCTCAAAGTGTTTATCTATA+TGG + chr8_1:91036836-91036855 Msa1225580:intron 30.0%
!! AAAATCAGAGACTAGTTTGA+TGG - chr8_1:91037117-91037136 None:intergenic 30.0%
AAAAGGTTAAACAGTCAAGT+TGG + chr8_1:91037180-91037199 Msa1225580:intron 30.0%
AGGACACTCTCAAATAAAAA+AGG - chr8_1:91037293-91037312 None:intergenic 30.0%
!!! GTGTTTTAGTAGGTTTAACA+AGG + chr8_1:91037366-91037385 Msa1225580:intron 30.0%
TATGGACATGATGATCAAAT+TGG + chr8_1:91037442-91037461 Msa1225580:intron 30.0%
CAAATAAGTTGTCACCAAAT+TGG - chr8_1:91037640-91037659 None:intergenic 30.0%
TTGACAACCATACTTTACAA+AGG + chr8_1:91037657-91037676 Msa1225580:intron 30.0%
! TCTCTTAACTTTTGTAGGTT+AGG + chr8_1:91037797-91037816 Msa1225580:intron 30.0%
TGAACTCAATGCAATATGAT+TGG + chr8_1:91037864-91037883 Msa1225580:intron 30.0%
CACCTATAAGTAGAAATGTA+GGG + chr8_1:91038043-91038062 Msa1225580:intron 30.0%
AATTAACACAAGCTGTCAAT+TGG + chr8_1:91038284-91038303 Msa1225580:intron 30.0%
GCACCAAAACAAATTATGTT+AGG - chr8_1:91038404-91038423 None:intergenic 30.0%
!! AAAGTAACGGATAACATTGA+CGG - chr8_1:91038868-91038887 None:intergenic 30.0%
CCATAGTAAGACAATCTTTA+AGG - chr8_1:91039448-91039467 None:intergenic 30.0%
CCTTAAAGATTGTCTTACTA+TGG + chr8_1:91039445-91039464 Msa1225580:intron 30.0%
AGATTGTCTTACTATGGATT+TGG + chr8_1:91039451-91039470 Msa1225580:intron 30.0%
CCTCTTCTATTTATCCTTTA+AGG - chr8_1:91039526-91039545 None:intergenic 30.0%
CCTTAAAGGATAAATAGAAG+AGG + chr8_1:91039523-91039542 Msa1225580:intron 30.0%
! GATGAAGATTTTGAACATGA+CGG + chr8_1:91039579-91039598 Msa1225580:intron 30.0%
ATATTCACTCATAAGTGAGT+AGG + chr8_1:91039654-91039673 Msa1225580:intron 30.0%
TATTCACTCATAAGTGAGTA+GGG + chr8_1:91039655-91039674 Msa1225580:intron 30.0%
ACTGTAGTTGAACTATGATT+AGG - chr8_1:91039726-91039745 None:intergenic 30.0%
TAACCTTATGAATTGCATAG+CGG + chr8_1:91039981-91040000 Msa1225580:intron 30.0%
! AATTGTGTCAACATTTTCGA+CGG - chr8_1:91040029-91040048 None:intergenic 30.0%
TGTAAAGTACAAGAGTTCTT+TGG + chr8_1:91040268-91040287 Msa1225580:CDS 30.0%
TCACAAATTGTGAAAACTGA+AGG + chr8_1:91040299-91040318 Msa1225580:CDS 30.0%
CTTATGTTGGGAAAGAAATA+TGG + chr8_1:91040413-91040432 Msa1225580:CDS 30.0%
GAACAAAAGATCTGATCTTG+TGG - chr8_1:91036592-91036611 None:intergenic 35.0%
! TGTATCCTTTATTTGGCTGA+TGG - chr8_1:91036620-91036639 None:intergenic 35.0%
ATACAACCTATCTTTCAGTC+AGG + chr8_1:91036635-91036654 Msa1225580:five_prime_UTR 35.0%
GGGTTTAAAAGGAGAAAACA+AGG - chr8_1:91036730-91036749 None:intergenic 35.0%
AAGTCTAGACATGAGTAACA+CGG - chr8_1:91036785-91036804 None:intergenic 35.0%
TGTTACTCATGTCTAGACTT+AGG + chr8_1:91036785-91036804 Msa1225580:intron 35.0%
ACTCTCAAGCCATTATGTAT+TGG + chr8_1:91037074-91037093 Msa1225580:intron 35.0%
TGTCCATACAAAAACCAGAA+CGG - chr8_1:91037430-91037449 None:intergenic 35.0%
CCTATGCACATAAATATGCT+TGG - chr8_1:91037520-91037539 None:intergenic 35.0%
CCAAGCATATTTATGTGCAT+AGG + chr8_1:91037517-91037536 Msa1225580:intron 35.0%
GCATATTTATGTGCATAGGA+AGG + chr8_1:91037521-91037540 Msa1225580:intron 35.0%
TATTTATGTGCATAGGAAGG+TGG + chr8_1:91037524-91037543 Msa1225580:intron 35.0%
ATTTATGTGCATAGGAAGGT+GGG + chr8_1:91037525-91037544 Msa1225580:intron 35.0%
! CTTAACTTTTGTAGGTTAGG+TGG + chr8_1:91037800-91037819 Msa1225580:intron 35.0%
GTGTATGTCCTATTCCTATA+TGG + chr8_1:91037963-91037982 Msa1225580:intron 35.0%
TCCTATTCCTATATGGTCTA+TGG + chr8_1:91037970-91037989 Msa1225580:intron 35.0%
ACCATAGACCATATAGGAAT+AGG - chr8_1:91037974-91037993 None:intergenic 35.0%
CCTACATTTCTACTTATAGG+TGG - chr8_1:91038045-91038064 None:intergenic 35.0%
CCACCTATAAGTAGAAATGT+AGG + chr8_1:91038042-91038061 Msa1225580:intron 35.0%
GACCCTACATTTCTACTTAT+AGG - chr8_1:91038048-91038067 None:intergenic 35.0%
!! TGTTTTTCAAACATCGTCCA+CGG + chr8_1:91038219-91038238 Msa1225580:intron 35.0%
! AGCTTGTGTTAATTTCTAGG+TGG - chr8_1:91038278-91038297 None:intergenic 35.0%
GACAGCTTGTGTTAATTTCT+AGG - chr8_1:91038281-91038300 None:intergenic 35.0%
!! CAAACTTTTGTGCTACTGTT+GGG - chr8_1:91038506-91038525 None:intergenic 35.0%
CCATAGGAATTTGCAATATG+TGG - chr8_1:91038549-91038568 None:intergenic 35.0%
CCACATATTGCAAATTCCTA+TGG + chr8_1:91038546-91038565 Msa1225580:CDS 35.0%
CATATTGCAAATTCCTATGG+AGG + chr8_1:91038549-91038568 Msa1225580:CDS 35.0%
!! AACTGTTTCTGAAACAGAAC+AGG - chr8_1:91038585-91038604 None:intergenic 35.0%
! AAGTTTTTCTCTGATGGAGA+TGG - chr8_1:91038633-91038652 None:intergenic 35.0%
! CTTGCAAAGTTTTTCTCTGA+TGG - chr8_1:91038639-91038658 None:intergenic 35.0%
!! TTTGCGACTGATTTTCTCAT+GGG + chr8_1:91038660-91038679 Msa1225580:CDS 35.0%
!!! AAGGGTATTGGAGATTGTTT+TGG + chr8_1:91038795-91038814 Msa1225580:CDS 35.0%
GGAAGAACAGTTAAAGATGA+AGG + chr8_1:91038816-91038835 Msa1225580:CDS 35.0%
ATGAAGGATTTACTTCGCTT+TGG + chr8_1:91038832-91038851 Msa1225580:CDS 35.0%
AAACCTGTGTTGGAAAGTAA+CGG - chr8_1:91038881-91038900 None:intergenic 35.0%
ATTTGAAAGGAAACCTGTGT+TGG - chr8_1:91038891-91038910 None:intergenic 35.0%
! CGCTTTGTTGTGTGTTAATT+AGG + chr8_1:91038960-91038979 Msa1225580:intron 35.0%
TTTGCAGGAAATATTGCATC+TGG + chr8_1:91039091-91039110 Msa1225580:CDS 35.0%
ATCCAACGAGTAAACAAAGA+CGG - chr8_1:91039140-91039159 None:intergenic 35.0%
AAGAAGACATTGCAATCAGA+TGG + chr8_1:91039244-91039263 Msa1225580:CDS 35.0%
ACAGTCCAAAATACAAACCA+CGG - chr8_1:91039324-91039343 None:intergenic 35.0%
ACCAATACGCAGAAAAAATG+TGG + chr8_1:91039490-91039509 Msa1225580:intron 35.0%
CCAATACGCAGAAAAAATGT+GGG + chr8_1:91039491-91039510 Msa1225580:intron 35.0%
ATTCACTCATAAGTGAGTAG+GGG + chr8_1:91039656-91039675 Msa1225580:intron 35.0%
CACTAGTTCAATTTCCGATT+TGG - chr8_1:91039697-91039716 None:intergenic 35.0%
GTAGTTGAACTATGATTAGG+AGG - chr8_1:91039723-91039742 None:intergenic 35.0%
!! TGAAGTCTTGTTTGTTCAAC+CGG - chr8_1:91039816-91039835 None:intergenic 35.0%
GTAACACATTCTGATTGAAC+CGG - chr8_1:91039850-91039869 None:intergenic 35.0%
TTTCCGCTATGCAATTCATA+AGG - chr8_1:91039987-91040006 None:intergenic 35.0%
GTCGAAAATGTTGACACAAT+TGG + chr8_1:91040028-91040047 Msa1225580:intron 35.0%
TGTTGACACAATTGGAGTAT+TGG + chr8_1:91040036-91040055 Msa1225580:intron 35.0%
! AGAAGAATGATGATGACATC+AGG + chr8_1:91040239-91040258 Msa1225580:CDS 35.0%
TGCAAGCTATGATAAACTTC+AGG + chr8_1:91040388-91040407 Msa1225580:CDS 35.0%
TAAACTTCAGGTGCTTATGT+TGG + chr8_1:91040400-91040419 Msa1225580:CDS 35.0%
AAACTTCAGGTGCTTATGTT+GGG + chr8_1:91040401-91040420 Msa1225580:CDS 35.0%
TTGGGAAAGAAATATGGTTC+TGG + chr8_1:91040419-91040438 Msa1225580:CDS 35.0%
CCATCATCTTATGCTGTATA+AGG - chr8_1:91040473-91040492 None:intergenic 35.0%
CCTTATACAGCATAAGATGA+TGG + chr8_1:91040470-91040489 Msa1225580:three_prime_UTR 35.0%
ACCTATCTTTCAGTCAGGTT+TGG + chr8_1:91036640-91036659 Msa1225580:intron 40.0%
AAGCTATCACGGAGAACTTA+TGG + chr8_1:91036924-91036943 Msa1225580:intron 40.0%
GGCTTGAGAGTTGAAAGTAA+GGG - chr8_1:91037065-91037084 None:intergenic 40.0%
TGGCTTGAGAGTTGAAAGTA+AGG - chr8_1:91037066-91037085 None:intergenic 40.0%
TCCCTAGCATACTCTCATAA+GGG + chr8_1:91037235-91037254 Msa1225580:intron 40.0%
!! GAGAGTGTCCTACAAAGTTA+AGG + chr8_1:91037302-91037321 Msa1225580:intron 40.0%
!!! TGTCCGTTCTGGTTTTTGTA+TGG + chr8_1:91037424-91037443 Msa1225580:intron 40.0%
AAGGTGGGTCATATCTCATA+TGG + chr8_1:91037540-91037559 Msa1225580:intron 40.0%
AAGTTAGCAGCACATTCATC+AGG - chr8_1:91037942-91037961 None:intergenic 40.0%
CCTATATGGTCTATGGTGAA+CGG + chr8_1:91037977-91037996 Msa1225580:intron 40.0%
GGATCTAAACGGTAAAGATG+CGG - chr8_1:91038073-91038092 None:intergenic 40.0%
TCTCTGTAAGTAGTAGCTCA+TGG - chr8_1:91038170-91038189 None:intergenic 40.0%
!! AGGTGAAGAAGTGTCACATA+TGG - chr8_1:91038249-91038268 None:intergenic 40.0%
!! AGCACTCAAAGCATTGATGA+TGG + chr8_1:91038461-91038480 Msa1225580:exon 40.0%
!! CATTGATGATGGCTGATAAG+AGG + chr8_1:91038472-91038491 Msa1225580:exon 40.0%
! TTTGTGCTACTGTTGGGTAT+TGG - chr8_1:91038500-91038519 None:intergenic 40.0%
!! CCAAACTTTTGTGCTACTGT+TGG - chr8_1:91038507-91038526 None:intergenic 40.0%
CCAACAGTAGCACAAAAGTT+TGG + chr8_1:91038504-91038523 Msa1225580:CDS 40.0%
! AGGTTTTTCTGAACCTCCAT+AGG - chr8_1:91038565-91038584 None:intergenic 40.0%
TGGAACAAACACTGCATTTG+AGG - chr8_1:91038613-91038632 None:intergenic 40.0%
!! CTTTGCGACTGATTTTCTCA+TGG + chr8_1:91038659-91038678 Msa1225580:CDS 40.0%
CAAGATGAGATGATTAAGGC+TGG + chr8_1:91038753-91038772 Msa1225580:CDS 40.0%
ATGAGATGATTAAGGCTGGT+AGG + chr8_1:91038757-91038776 Msa1225580:CDS 40.0%
CAATCTCCAATACCCTTGTA+AGG - chr8_1:91038792-91038811 None:intergenic 40.0%
! TATCCGTTACTTTCCAACAC+AGG + chr8_1:91038875-91038894 Msa1225580:CDS 40.0%
AACTTCAAGCAAGAGAGAGA+TGG + chr8_1:91039055-91039074 Msa1225580:CDS 40.0%
AGCAAGAGAGAGATGGATAT+TGG + chr8_1:91039062-91039081 Msa1225580:CDS 40.0%
GGATATTGGAAAGTCTTTGC+AGG + chr8_1:91039076-91039095 Msa1225580:CDS 40.0%
! TTCCGTCTTTGTTTACTCGT+TGG + chr8_1:91039135-91039154 Msa1225580:CDS 40.0%
TTGCAATCAGATGGTATTGC+TGG + chr8_1:91039253-91039272 Msa1225580:CDS 40.0%
GGCTTCAATGTTTCAGTTGT+TGG + chr8_1:91039286-91039305 Msa1225580:CDS 40.0%
!! GTGTACCGTGGTTTGTATTT+TGG + chr8_1:91039316-91039335 Msa1225580:CDS 40.0%
!!! CGTATTGGTTTTGACATGAG+AGG - chr8_1:91039479-91039498 None:intergenic 40.0%
!!! CCCACATTTTTTCTGCGTAT+TGG - chr8_1:91039494-91039513 None:intergenic 40.0%
ATACGCAGAAAAAATGTGGG+AGG + chr8_1:91039494-91039513 Msa1225580:intron 40.0%
! GTGGGAGGTTTTTACCTTAA+AGG + chr8_1:91039509-91039528 Msa1225580:intron 40.0%
AGACTTCAACCAGTTCAATC+CGG + chr8_1:91039828-91039847 Msa1225580:intron 40.0%
AATTTGGACAGATCGCTGTT+TGG - chr8_1:91039886-91039905 None:intergenic 40.0%
CTTCTACGAACAGTGTCTAA+AGG - chr8_1:91040224-91040243 None:intergenic 40.0%
GGTCCAAAATCTCTCTTCAA+AGG + chr8_1:91040320-91040339 Msa1225580:CDS 40.0%
!! GCACCTTTGAAGAGAGATTT+TGG - chr8_1:91040326-91040345 None:intergenic 40.0%
! AAATCTCTCTTCAAAGGTGC+TGG + chr8_1:91040326-91040345 Msa1225580:CDS 40.0%
!! GGAAAGAAATATGGTTCTGG+TGG + chr8_1:91040422-91040441 Msa1225580:CDS 40.0%
GCCAAACCTGACTGAAAGAT+AGG - chr8_1:91036644-91036663 None:intergenic 45.0%
GTCCCTAGCATACTCTCATA+AGG + chr8_1:91037234-91037253 Msa1225580:intron 45.0%
! GCCCTTATGAGAGTATGCTA+GGG - chr8_1:91037239-91037258 None:intergenic 45.0%
! AGCCCTTATGAGAGTATGCT+AGG - chr8_1:91037240-91037259 None:intergenic 45.0%
! ACACATGATGATGTCCGTTC+TGG + chr8_1:91037413-91037432 Msa1225580:intron 45.0%
CCGTTCACCATAGACCATAT+AGG - chr8_1:91037980-91037999 None:intergenic 45.0%
GACTGAGACGGTGACATAAT+TGG - chr8_1:91038131-91038150 None:intergenic 45.0%
ACGTGTTGTCATGACTGAGA+CGG - chr8_1:91038143-91038162 None:intergenic 45.0%
GTGTCACATATGGTATACCG+TGG - chr8_1:91038239-91038258 None:intergenic 45.0%
! TCTGAGCCTTACAAGGGTAT+TGG + chr8_1:91038783-91038802 Msa1225580:CDS 45.0%
!! GGATTTACTTCGCTTTGGAG+AGG + chr8_1:91038837-91038856 Msa1225580:CDS 45.0%
!! GGTATTGCTGGTCTTTATCG+CGG + chr8_1:91039265-91039284 Msa1225580:CDS 45.0%
GTTGGAATCATTGTGTACCG+TGG + chr8_1:91039304-91039323 Msa1225580:CDS 45.0%
TTCTCTTAAGCCAGTGCTCT+TGG + chr8_1:91039348-91039367 Msa1225580:CDS 45.0%
! GAACGTTTCAGGTAAGAGTG+AGG + chr8_1:91039374-91039393 Msa1225580:intron 45.0%
CTGATTGAACCGGATTGAAC+TGG - chr8_1:91039840-91039859 None:intergenic 45.0%
GGTAGGGGCAGATTAAATCA+TGG + chr8_1:91039933-91039952 Msa1225580:intron 45.0%
! CAACATTTTCGACGGTAGAG+TGG - chr8_1:91040021-91040040 None:intergenic 45.0%
AACTGTAACAGCCCATCCTA+GGG - chr8_1:91040180-91040199 None:intergenic 45.0%
AACATTCTTCGAGCAGTTGC+TGG + chr8_1:91040353-91040372 Msa1225580:CDS 45.0%
!! GCGACTGATTTTCTCATGGG+TGG + chr8_1:91038663-91038682 Msa1225580:CDS 50.0%
AGAAGCTTCACGCGCTCAAT+AGG - chr8_1:91038723-91038742 None:intergenic 50.0%
TAGGCTCTCTGAGCCTTACA+AGG + chr8_1:91038776-91038795 Msa1225580:CDS 50.0%
AGGCTCTCTGAGCCTTACAA+GGG + chr8_1:91038777-91038796 Msa1225580:CDS 50.0%
TCCACCTTTCTTCGTGGACT+TGG - chr8_1:91039191-91039210 None:intergenic 50.0%
GGTGGAGAGAGGCAATTCAA+TGG + chr8_1:91039205-91039224 Msa1225580:CDS 50.0%
CTTAAGCCAGTGCTCTTGGT+AGG + chr8_1:91039352-91039371 Msa1225580:CDS 50.0%
! AACGTTCCTACCAAGAGCAC+TGG - chr8_1:91039361-91039380 None:intergenic 50.0%
GCTCTTGGTAGGAACGTTTC+AGG + chr8_1:91039363-91039382 Msa1225580:CDS 50.0%
!! TTCCTAGCTAGCTTTGCCCT+AGG + chr8_1:91040161-91040180 Msa1225580:CDS 50.0%
ATCCTAGGGCAAAGCTAGCT+AGG - chr8_1:91040166-91040185 None:intergenic 50.0%
!! TAGCTAGCTTTGCCCTAGGA+TGG + chr8_1:91040165-91040184 Msa1225580:CDS 50.0%
!! AGCTAGCTTTGCCCTAGGAT+GGG + chr8_1:91040166-91040185 Msa1225580:CDS 50.0%
CAACTGTAACAGCCCATCCT+AGG - chr8_1:91040181-91040200 None:intergenic 50.0%
!! CTAGGATGGGCTGTTACAGT+TGG + chr8_1:91040179-91040198 Msa1225580:CDS 50.0%
!! ATTGCATCTGGTGCTGCAGC+AGG + chr8_1:91039103-91039122 Msa1225580:CDS 55.0%
GACGCCAAGTCCACGAAGAA+AGG + chr8_1:91039184-91039203 Msa1225580:CDS 55.0%
GCCAAGTCCACGAAGAAAGG+TGG + chr8_1:91039187-91039206 Msa1225580:CDS 55.0%
CCTCTCTCCACCTTTCTTCG+TGG - chr8_1:91039197-91039216 None:intergenic 55.0%
CCACGAAGAAAGGTGGAGAG+AGG + chr8_1:91039194-91039213 Msa1225580:CDS 55.0%
TTCGACGGTAGAGTGGCTTG+AGG - chr8_1:91040014-91040033 None:intergenic 55.0%
TGGACTTGGCGTCGCTTGCA+AGG - chr8_1:91039177-91039196 None:intergenic 60.0%
CTTCGAGCAGTTGCTGGTGC+TGG + chr8_1:91040359-91040378 Msa1225580:CDS 60.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 91036565 91040631 91036565 ID=Msa1225580;Name=Msa1225580
chr8_1 mRNA 91036565 91040631 91036565 ID=Msa1225580-mRNA-1;Parent=Msa1225580;Name=Msa1225580-mRNA-1;_AED=0.03;_eAED=0.03;_QI=136|1|1|1|0.66|0.5|4|180|362
chr8_1 exon 91036565 91036656 91036565 ID=Msa1225580-mRNA-1:exon:33154;Parent=Msa1225580-mRNA-1
chr8_1 exon 91038433 91038896 91038433 ID=Msa1225580-mRNA-1:exon:33155;Parent=Msa1225580-mRNA-1
chr8_1 exon 91039013 91039384 91039013 ID=Msa1225580-mRNA-1:exon:33156;Parent=Msa1225580-mRNA-1
chr8_1 exon 91040155 91040631 91040155 ID=Msa1225580-mRNA-1:exon:33157;Parent=Msa1225580-mRNA-1
chr8_1 five_prime_UTR 91036565 91036656 91036565 ID=Msa1225580-mRNA-1:five_prime_utr;Parent=Msa1225580-mRNA-1
chr8_1 five_prime_UTR 91038433 91038476 91038433 ID=Msa1225580-mRNA-1:five_prime_utr;Parent=Msa1225580-mRNA-1
chr8_1 CDS 91038477 91038896 91038477 ID=Msa1225580-mRNA-1:cds;Parent=Msa1225580-mRNA-1
chr8_1 CDS 91039013 91039384 91039013 ID=Msa1225580-mRNA-1:cds;Parent=Msa1225580-mRNA-1
chr8_1 CDS 91040155 91040451 91040155 ID=Msa1225580-mRNA-1:cds;Parent=Msa1225580-mRNA-1
chr8_1 three_prime_UTR 91040452 91040631 91040452 ID=Msa1225580-mRNA-1:three_prime_utr;Parent=Msa1225580-mRNA-1
Gene Sequence

>Msa1225580

ATGATGGCTGATAAGAGGCACCAATACCCAACAGTAGCACAAAAGTTTGGTCTAAGATCAAATCTTTCTCCACATATTGCAAATTCCTATGGAGGTTCAGAAAAACCTGTTCTGTTTCAGAAACAGTTTTCATCCTCAAATGCAGTGTTTGTTCCATCTCCATCAGAGAAAAACTTTGCAAGCTTTGCGACTGATTTTCTCATGGGTGGAGTTTCTGCAGCAGTGTCAAAATCAGCAGCAGCTCCTATTGAGCGCGTGAAGCTTCTGATTCAAAATCAAGATGAGATGATTAAGGCTGGTAGGCTCTCTGAGCCTTACAAGGGTATTGGAGATTGTTTTGGAAGAACAGTTAAAGATGAAGGATTTACTTCGCTTTGGAGAGGAAACACCGTCAATGTTATCCGTTACTTTCCAACACAGGCATTCAACTTTGCATTCAAAGACTACTTTAAGAAGCTATTTAACTTCAAGCAAGAGAGAGATGGATATTGGAAAGTCTTTGCAGGAAATATTGCATCTGGTGCTGCAGCAGGAGCTTCATCTTCCGTCTTTGTTTACTCGTTGGATTATGCTCGAACTCGCCTTGCAAGCGACGCCAAGTCCACGAAGAAAGGTGGAGAGAGGCAATTCAATGGCTTGATTGATGTCTACAAGAAGACATTGCAATCAGATGGTATTGCTGGTCTTTATCGCGGCTTCAATGTTTCAGTTGTTGGAATCATTGTGTACCGTGGTTTGTATTTTGGACTGTATGATTCTCTTAAGCCAGTGCTCTTGGTAGGAACGTTTCAGGATAGTTTCCTAGCTAGCTTTGCCCTAGGATGGGCTGTTACAGTTGGTGCTAGTGTAGCATCTTATCCTTTAGACACTGTTCGTAGAAGAATGATGATGACATCAGGTGAAGCTGTAAAGTACAAGAGTTCTTTGGATGCTTTCTCACAAATTGTGAAAACTGAAGGTCCAAAATCTCTCTTCAAAGGTGCTGGTGCAAACATTCTTCGAGCAGTTGCTGGTGCTGGTGTGCTTGCAAGCTATGATAAACTTCAGGTGCTTATGTTGGGAAAGAAATATGGTTCTGGTGGAGCTTAA

Protein sequence

>Msa1225580

MMADKRHQYPTVAQKFGLRSNLSPHIANSYGGSEKPVLFQKQFSSSNAVFVPSPSEKNFASFATDFLMGGVSAAVSKSAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFGRTVKDEGFTSLWRGNTVNVIRYFPTQAFNFAFKDYFKKLFNFKQERDGYWKVFAGNIASGAAAGASSSVFVYSLDYARTRLASDAKSTKKGGERQFNGLIDVYKKTLQSDGIAGLYRGFNVSVVGIIVYRGLYFGLYDSLKPVLLVGTFQDSFLASFALGWAVTVGASVASYPLDTVRRRMMMTSGEAVKYKSSLDAFSQIVKTEGPKSLFKGAGANILRAVAGAGVLASYDKLQVLMLGKKYGSGGA*