Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0766410 | XP_003613827.1 | 86.787 | 333 | 31 | 3 | 1 | 331 | 1 | 322 | 0.0 | 536 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0766410 | sp|Q9SEZ3|CDF5_ARATH | 41.451 | 193 | 73 | 7 | 131 | 297 | 126 | 304 | 3.37e-38 | 143 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0766410 | G7KGL9 | 86.787 | 333 | 31 | 3 | 1 | 331 | 1 | 322 | 0.0 | 536 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0766410 | TF | C2C2-Dof |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0725820 | Msa0766410 | 0.802041 | 6.771384e-49 | -8.615850e-47 |
| Msa0766410 | Msa0845870 | 0.866241 | 3.293018e-65 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0766410 | MtrunA17_Chr5g0417571 | 86.787 | 333 | 31 | 3 | 1 | 331 | 1 | 322 | 0.0 | 536 |
| Msa0766410 | MtrunA17_Chr5g0417551 | 62.953 | 386 | 73 | 8 | 1 | 331 | 1 | 371 | 3.85e-145 | 414 |
| Msa0766410 | MtrunA17_Chr5g0417601 | 57.614 | 394 | 91 | 6 | 1 | 331 | 1 | 381 | 4.10e-133 | 384 |
| Msa0766410 | MtrunA17_Chr5g0417561 | 58.290 | 386 | 83 | 10 | 1 | 331 | 1 | 363 | 1.74e-129 | 374 |
| Msa0766410 | MtrunA17_Chr4g0042481 | 35.750 | 400 | 122 | 15 | 2 | 301 | 4 | 368 | 8.44e-53 | 180 |
| Msa0766410 | MtrunA17_Chr7g0217581 | 39.777 | 269 | 105 | 9 | 4 | 243 | 103 | 343 | 5.32e-44 | 159 |
| Msa0766410 | MtrunA17_Chr6g0453321 | 38.333 | 240 | 115 | 7 | 6 | 220 | 8 | 239 | 6.38e-39 | 144 |
| Msa0766410 | MtrunA17_Chr3g0092111 | 38.889 | 234 | 113 | 7 | 7 | 216 | 9 | 236 | 1.01e-36 | 137 |
| Msa0766410 | MtrunA17_Chr7g0254161 | 54.098 | 122 | 33 | 4 | 120 | 220 | 86 | 205 | 1.13e-34 | 131 |
| Msa0766410 | MtrunA17_Chr6g0460731 | 54.369 | 103 | 43 | 2 | 97 | 195 | 53 | 155 | 6.67e-33 | 125 |
| Msa0766410 | MtrunA17_Chr8g0355261 | 72.059 | 68 | 19 | 0 | 125 | 192 | 106 | 173 | 1.07e-31 | 123 |
| Msa0766410 | MtrunA17_Chr6g0460721 | 53.125 | 96 | 42 | 1 | 98 | 190 | 47 | 142 | 5.18e-30 | 116 |
| Msa0766410 | MtrunA17_Chr2g0283811 | 70.000 | 60 | 18 | 0 | 131 | 190 | 41 | 100 | 3.65e-29 | 110 |
| Msa0766410 | MtrunA17_Chr2g0326001 | 63.636 | 66 | 23 | 1 | 126 | 190 | 28 | 93 | 3.88e-25 | 102 |
| Msa0766410 | MtrunA17_Chr3g0127201 | 57.143 | 70 | 30 | 0 | 124 | 193 | 14 | 83 | 8.45e-25 | 101 |
| Msa0766410 | MtrunA17_Chr8g0374111 | 49.451 | 91 | 35 | 1 | 129 | 208 | 21 | 111 | 3.21e-24 | 98.6 |
| Msa0766410 | MtrunA17_Chr8g0341671 | 62.500 | 64 | 23 | 1 | 126 | 188 | 8 | 71 | 8.98e-24 | 97.4 |
| Msa0766410 | MtrunA17_Chr2g0328021 | 55.714 | 70 | 31 | 0 | 121 | 190 | 46 | 115 | 9.37e-24 | 99.0 |
| Msa0766410 | MtrunA17_Chr8g0346551 | 61.017 | 59 | 23 | 0 | 132 | 190 | 19 | 77 | 2.86e-23 | 97.1 |
| Msa0766410 | MtrunA17_Chr4g0010151 | 48.684 | 76 | 39 | 0 | 115 | 190 | 60 | 135 | 3.10e-23 | 98.6 |
| Msa0766410 | MtrunA17_Chr4g0030051 | 61.538 | 65 | 24 | 1 | 126 | 189 | 29 | 93 | 3.20e-23 | 97.4 |
| Msa0766410 | MtrunA17_Chr8g0374251 | 57.333 | 75 | 31 | 1 | 135 | 208 | 66 | 140 | 6.56e-23 | 97.4 |
| Msa0766410 | MtrunA17_Chr3g0126201 | 57.746 | 71 | 28 | 2 | 122 | 190 | 34 | 104 | 1.47e-22 | 96.3 |
| Msa0766410 | MtrunA17_Chr4g0061761 | 67.925 | 53 | 17 | 0 | 135 | 187 | 38 | 90 | 1.87e-22 | 95.9 |
| Msa0766410 | MtrunA17_Chr1g0188851 | 59.375 | 64 | 25 | 1 | 127 | 189 | 32 | 95 | 1.90e-22 | 95.1 |
| Msa0766410 | MtrunA17_Chr7g0223311 | 70.588 | 51 | 15 | 0 | 139 | 189 | 79 | 129 | 3.08e-22 | 95.9 |
| Msa0766410 | MtrunA17_Chr8g0367161 | 54.167 | 72 | 33 | 0 | 119 | 190 | 14 | 85 | 3.16e-22 | 95.5 |
| Msa0766410 | MtrunA17_Chr1g0177251 | 63.333 | 60 | 21 | 1 | 132 | 190 | 6 | 65 | 4.99e-22 | 94.0 |
| Msa0766410 | MtrunA17_Chr4g0047761 | 67.925 | 53 | 17 | 0 | 139 | 191 | 74 | 126 | 7.32e-22 | 94.4 |
| Msa0766410 | MtrunA17_Chr4g0031411 | 61.404 | 57 | 22 | 0 | 133 | 189 | 71 | 127 | 9.00e-22 | 94.4 |
| Msa0766410 | MtrunA17_Chr4g0047001 | 69.231 | 52 | 16 | 0 | 139 | 190 | 57 | 108 | 9.15e-22 | 94.7 |
| Msa0766410 | MtrunA17_Chr2g0282051 | 61.404 | 57 | 22 | 0 | 135 | 191 | 44 | 100 | 1.02e-21 | 92.8 |
| Msa0766410 | MtrunA17_Chr2g0308011 | 68.000 | 50 | 16 | 0 | 136 | 185 | 36 | 85 | 1.37e-21 | 91.3 |
| Msa0766410 | MtrunA17_Chr5g0411951 | 65.455 | 55 | 19 | 0 | 133 | 187 | 39 | 93 | 1.59e-21 | 93.6 |
| Msa0766410 | MtrunA17_Chr7g0237921 | 63.462 | 52 | 19 | 0 | 139 | 190 | 78 | 129 | 2.26e-20 | 90.5 |
| Msa0766410 | MtrunA17_Chr3g0117601 | 38.136 | 118 | 55 | 2 | 70 | 187 | 12 | 111 | 3.25e-20 | 89.7 |
| Msa0766410 | MtrunA17_Chr2g0282511 | 66.000 | 50 | 17 | 0 | 136 | 185 | 44 | 93 | 3.99e-20 | 89.4 |
| Msa0766410 | MtrunA17_Chr2g0282441 | 70.000 | 50 | 15 | 0 | 139 | 188 | 27 | 76 | 5.05e-20 | 89.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0766410 | AT1G69570.1 | 41.451 | 193 | 73 | 7 | 131 | 297 | 126 | 304 | 3.43e-39 | 143 |
| Msa0766410 | AT5G62430.1 | 42.857 | 196 | 96 | 6 | 122 | 309 | 38 | 225 | 8.15e-39 | 139 |
| Msa0766410 | AT5G39660.3 | 32.345 | 371 | 159 | 12 | 2 | 297 | 1 | 354 | 5.87e-38 | 140 |
| Msa0766410 | AT5G39660.1 | 32.345 | 371 | 159 | 12 | 2 | 297 | 1 | 354 | 5.87e-38 | 140 |
| Msa0766410 | AT5G39660.2 | 32.345 | 371 | 159 | 12 | 2 | 297 | 1 | 354 | 5.87e-38 | 140 |
| Msa0766410 | AT1G26790.1 | 38.298 | 235 | 116 | 9 | 93 | 306 | 65 | 291 | 3.32e-37 | 137 |
| Msa0766410 | AT3G47500.1 | 54.054 | 111 | 38 | 1 | 86 | 196 | 72 | 169 | 8.52e-33 | 126 |
| Msa0766410 | AT1G29160.1 | 65.217 | 69 | 21 | 1 | 122 | 190 | 50 | 115 | 3.91e-31 | 115 |
| Msa0766410 | AT2G34140.1 | 46.018 | 113 | 51 | 3 | 85 | 190 | 2 | 111 | 1.93e-30 | 114 |
| Msa0766410 | AT5G60200.1 | 61.538 | 65 | 25 | 0 | 130 | 194 | 48 | 112 | 8.37e-25 | 101 |
| Msa0766410 | AT1G51700.1 | 60.000 | 65 | 25 | 1 | 125 | 188 | 20 | 84 | 2.29e-24 | 98.6 |
| Msa0766410 | AT3G45610.1 | 61.538 | 65 | 25 | 0 | 130 | 194 | 33 | 97 | 8.52e-24 | 98.2 |
| Msa0766410 | AT2G37590.1 | 50.000 | 74 | 37 | 0 | 117 | 190 | 69 | 142 | 8.70e-24 | 100 |
| Msa0766410 | AT4G24060.1 | 59.091 | 66 | 27 | 0 | 125 | 190 | 41 | 106 | 9.23e-24 | 100 |
| Msa0766410 | AT2G28810.2 | 44.318 | 88 | 47 | 1 | 101 | 188 | 43 | 128 | 2.31e-23 | 99.0 |
| Msa0766410 | AT2G28810.1 | 44.318 | 88 | 47 | 1 | 101 | 188 | 60 | 145 | 3.59e-23 | 98.6 |
| Msa0766410 | AT3G61850.2 | 55.714 | 70 | 31 | 0 | 125 | 194 | 50 | 119 | 4.14e-23 | 97.4 |
| Msa0766410 | AT3G61850.3 | 55.714 | 70 | 31 | 0 | 125 | 194 | 50 | 119 | 4.14e-23 | 97.4 |
| Msa0766410 | AT3G61850.1 | 55.714 | 70 | 31 | 0 | 125 | 194 | 62 | 131 | 4.86e-23 | 97.4 |
| Msa0766410 | AT3G55370.3 | 41.237 | 97 | 56 | 1 | 98 | 194 | 83 | 178 | 5.62e-23 | 98.6 |
| Msa0766410 | AT3G61850.5 | 55.714 | 70 | 31 | 0 | 125 | 194 | 50 | 119 | 5.96e-23 | 97.4 |
| Msa0766410 | AT3G55370.1 | 41.237 | 97 | 56 | 1 | 98 | 194 | 38 | 133 | 6.10e-23 | 97.8 |
| Msa0766410 | AT3G61850.4 | 55.714 | 70 | 31 | 0 | 125 | 194 | 62 | 131 | 7.12e-23 | 97.4 |
| Msa0766410 | AT3G55370.2 | 41.237 | 97 | 56 | 1 | 98 | 194 | 38 | 133 | 8.79e-23 | 97.8 |
| Msa0766410 | AT5G60850.1 | 63.333 | 60 | 22 | 0 | 135 | 194 | 49 | 108 | 1.35e-22 | 96.3 |
| Msa0766410 | AT3G50410.1 | 69.231 | 52 | 16 | 0 | 137 | 188 | 30 | 81 | 1.71e-22 | 95.1 |
| Msa0766410 | AT3G21270.1 | 70.588 | 51 | 15 | 0 | 139 | 189 | 31 | 81 | 3.23e-22 | 93.2 |
| Msa0766410 | AT1G07640.1 | 68.627 | 51 | 16 | 0 | 139 | 189 | 23 | 73 | 4.18e-22 | 94.4 |
| Msa0766410 | AT1G07640.2 | 68.627 | 51 | 16 | 0 | 139 | 189 | 79 | 129 | 4.94e-22 | 95.1 |
| Msa0766410 | AT1G07640.3 | 68.627 | 51 | 16 | 0 | 139 | 189 | 87 | 137 | 6.00e-22 | 95.1 |
| Msa0766410 | AT5G66940.1 | 44.211 | 95 | 40 | 1 | 95 | 189 | 3 | 84 | 6.84e-22 | 92.8 |
| Msa0766410 | AT2G28510.1 | 66.071 | 56 | 19 | 0 | 139 | 194 | 50 | 105 | 7.39e-22 | 94.0 |
| Msa0766410 | AT1G64620.1 | 56.250 | 64 | 27 | 1 | 122 | 185 | 35 | 97 | 3.11e-21 | 93.2 |
| Msa0766410 | AT3G52440.1 | 48.889 | 90 | 40 | 2 | 135 | 223 | 22 | 106 | 3.36e-21 | 91.3 |
| Msa0766410 | AT5G65590.1 | 48.387 | 93 | 46 | 1 | 100 | 192 | 6 | 96 | 4.15e-21 | 92.4 |
| Msa0766410 | AT1G47655.1 | 48.718 | 78 | 37 | 1 | 108 | 185 | 3 | 77 | 4.29e-21 | 90.1 |
| Msa0766410 | AT1G28310.1 | 64.815 | 54 | 19 | 0 | 137 | 190 | 27 | 80 | 4.87e-21 | 92.0 |
| Msa0766410 | AT3G52440.2 | 48.889 | 90 | 40 | 2 | 135 | 223 | 41 | 125 | 5.68e-21 | 91.3 |
| Msa0766410 | AT1G28310.2 | 64.815 | 54 | 19 | 0 | 137 | 190 | 51 | 104 | 6.87e-21 | 92.0 |
| Msa0766410 | AT4G38000.1 | 64.286 | 56 | 19 | 1 | 136 | 190 | 40 | 95 | 1.25e-20 | 89.7 |
| Msa0766410 | AT4G00940.1 | 57.627 | 59 | 25 | 0 | 132 | 190 | 63 | 121 | 1.70e-20 | 90.5 |
| Msa0766410 | AT4G00940.3 | 57.627 | 59 | 25 | 0 | 132 | 190 | 63 | 121 | 1.70e-20 | 90.5 |
| Msa0766410 | AT4G00940.2 | 57.627 | 59 | 25 | 0 | 132 | 190 | 63 | 121 | 1.70e-20 | 90.5 |
| Msa0766410 | AT5G02460.1 | 58.621 | 58 | 24 | 0 | 133 | 190 | 91 | 148 | 2.30e-20 | 91.3 |
| Msa0766410 | AT5G62940.1 | 40.984 | 122 | 48 | 2 | 139 | 236 | 75 | 196 | 2.64e-20 | 90.9 |
| Msa0766410 | AT1G21340.1 | 66.000 | 50 | 17 | 0 | 139 | 188 | 40 | 89 | 2.70e-20 | 89.0 |
| Msa0766410 | AT2G46590.1 | 60.377 | 53 | 21 | 0 | 132 | 184 | 63 | 115 | 6.91e-20 | 89.7 |
| Msa0766410 | AT2G46590.2 | 60.377 | 53 | 21 | 0 | 132 | 184 | 75 | 127 | 8.06e-20 | 89.4 |
| Msa0766410 | AT4G21050.1 | 54.688 | 64 | 29 | 0 | 125 | 188 | 12 | 75 | 5.09e-19 | 84.3 |
| Msa0766410 | AT4G21040.1 | 63.462 | 52 | 19 | 0 | 139 | 190 | 27 | 78 | 1.51e-17 | 80.9 |
| Msa0766410 | AT4G21080.1 | 63.462 | 52 | 19 | 0 | 139 | 190 | 27 | 78 | 6.01e-17 | 79.7 |
Find 54 sgRNAs with CRISPR-Local
Find 189 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCCTTAAAGTTAGTTTATT+TGG | 0.151164 | 5_2:-28033340 | None:intergenic |
| AACCAAATAAACTAACTTTA+AGG | 0.169523 | 5_2:+28033338 | Msa0766410:CDS |
| CCACCATAGAATGCTATATT+TGG | 0.230148 | 5_2:-28033265 | None:intergenic |
| ACAACTTGGTCTGGTTTCTT+TGG | 0.248772 | 5_2:-28032872 | None:intergenic |
| CTCCAGAAGTCCAGTATCTT+TGG | 0.293736 | 5_2:-28032985 | None:intergenic |
| TGCCAAAGATACTGGACTTC+TGG | 0.300675 | 5_2:+28032983 | Msa0766410:CDS |
| TTCCATGAGATGATTTGATT+TGG | 0.304050 | 5_2:+28033463 | Msa0766410:exon |
| AATGCTATATTTGGATAGAT+TGG | 0.337846 | 5_2:-28033256 | None:intergenic |
| ATGAGTACTGTCTTGACATT+TGG | 0.342898 | 5_2:+28033097 | Msa0766410:CDS |
| TATCCAAATATAGCATTCTA+TGG | 0.352424 | 5_2:+28033262 | Msa0766410:CDS |
| AGTGAAGTTGAAGACATAAT+AGG | 0.361504 | 5_2:-28033130 | None:intergenic |
| GAGATGATTTGATTTGGAAT+AGG | 0.387321 | 5_2:+28033469 | Msa0766410:exon |
| ACATGATGCAAAGAGATATA+AGG | 0.388068 | 5_2:+28032018 | Msa0766410:CDS |
| ATTCTGAATCCTCTGTGGTT+TGG | 0.395071 | 5_2:-28032733 | None:intergenic |
| AGCATTCTATGGTGGTTGTT+TGG | 0.399605 | 5_2:+28033273 | Msa0766410:CDS |
| GGACATGGAACAACTTGGTC+TGG | 0.406395 | 5_2:-28032881 | None:intergenic |
| GTGGTTGTTTGGTACCATCT+TGG | 0.412555 | 5_2:+28033284 | Msa0766410:CDS |
| ACCACGAGAAATATGCTTAT+AGG | 0.437951 | 5_2:+28033010 | Msa0766410:CDS |
| ATCTTTCGTTCAAAGAATGA+TGG | 0.447271 | 5_2:+28033385 | Msa0766410:CDS |
| CTCAATAAGGCTTGAAGATG+TGG | 0.447964 | 5_2:-28032759 | None:intergenic |
| CTAACGCTGCAGCTTTATCA+AGG | 0.467712 | 5_2:+28033431 | Msa0766410:CDS |
| GTTGAAGAATTCACTTCAAG+TGG | 0.481761 | 5_2:-28031992 | Msa0766400:CDS |
| TAAGGAAACATTCAAGAGAT+GGG | 0.488389 | 5_2:+28033356 | Msa0766410:CDS |
| AAATCTTCATGAGCAATAGT+AGG | 0.488963 | 5_2:-28031929 | Msa0766400:intron |
| TTCCAAATCAAATCATCTCA+TGG | 0.489753 | 5_2:-28033465 | None:intergenic |
| TACTGTCTTGACATTTGGAT+CGG | 0.502009 | 5_2:+28033102 | Msa0766410:CDS |
| TTAAGGAAACATTCAAGAGA+TGG | 0.512653 | 5_2:+28033355 | Msa0766410:CDS |
| GACGTCTCTGTTTCAGATGA+GGG | 0.514212 | 5_2:-28032794 | None:intergenic |
| TTCATTAGACTGTGTTGAGA+TGG | 0.528897 | 5_2:-28033317 | None:intergenic |
| AAAAGAACTCATCGAGGATG+CGG | 0.531958 | 5_2:+28032703 | Msa0766410:CDS |
| AGAAATATGCTTATAGGCGC+AGG | 0.536173 | 5_2:+28033016 | Msa0766410:CDS |
| ATATTTGGATAGATTGGCAC+AGG | 0.538462 | 5_2:-28033250 | None:intergenic |
| TAACACATAGCAGGATTCCA+TGG | 0.544411 | 5_2:-28033226 | None:intergenic |
| GAATGATGGAGGACTTTCCA+AGG | 0.552945 | 5_2:+28033399 | Msa0766410:CDS |
| AGACGTCTCTGTTTCAGATG+AGG | 0.571871 | 5_2:-28032795 | None:intergenic |
| AAGAAGAGATTCTGTTCTTG+CGG | 0.572733 | 5_2:-28033042 | None:intergenic |
| ATCTTGGACATGGAACAACT+TGG | 0.574876 | 5_2:-28032886 | None:intergenic |
| GCCTATAAGCATATTTCTCG+TGG | 0.581874 | 5_2:-28033011 | None:intergenic |
| TCAATAAGGCTTGAAGATGT+GGG | 0.585209 | 5_2:-28032758 | None:intergenic |
| GGCACAGGATAACACATAGC+AGG | 0.586834 | 5_2:-28033235 | None:intergenic |
| GGATTCCATGGAAACTGTTG+AGG | 0.594593 | 5_2:-28033214 | None:intergenic |
| AATAGTAGGAGTAAATTCTG+AGG | 0.595274 | 5_2:-28031915 | Msa0766400:intron |
| AATGATGGAGGACTTTCCAA+GGG | 0.597993 | 5_2:+28033400 | Msa0766410:CDS |
| AGCGTTAGAAGCAAAACCCT+TGG | 0.603793 | 5_2:-28033416 | None:intergenic |
| ATGGATTGTACGCTCCAAGA+TGG | 0.605225 | 5_2:-28033298 | None:intergenic |
| AAGGAAACATTCAAGAGATG+GGG | 0.613145 | 5_2:+28033357 | Msa0766410:CDS |
| TTTCGTTCAAAGAATGATGG+AGG | 0.623392 | 5_2:+28033388 | Msa0766410:CDS |
| CAAAGATACTGGACTTCTGG+AGG | 0.634659 | 5_2:+28032986 | Msa0766410:CDS |
| CCAAATATAGCATTCTATGG+TGG | 0.645659 | 5_2:+28033265 | Msa0766410:CDS |
| GGGAGATTCTGAATCCTCTG+TGG | 0.656736 | 5_2:-28032738 | None:intergenic |
| ATGTCCAAGATGCAAAAGCA+CGG | 0.662046 | 5_2:+28032898 | Msa0766410:CDS |
| ATCAAGAAAAGAACTCATCG+AGG | 0.704142 | 5_2:+28032697 | Msa0766410:CDS |
| GGCTTCATTCCAAACCACAG+AGG | 0.732108 | 5_2:+28032724 | Msa0766410:CDS |
| ACTCATTTGATGATGATGTG+AGG | 0.757465 | 5_2:-28033080 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATATAAGAACAAATAAAT+CGG | + | chr5_2:28032459-28032478 | Msa0766410:intron | 10.0% |
| !! | TTATATAAGAACAAATAAAT+CGG | + | chr5_2:28032459-28032478 | Msa0766410:intron | 10.0% |
| !! | AATACATGTAGTTATATTAT+CGG | + | chr5_2:28032548-28032567 | Msa0766410:intron | 15.0% |
| !!! | TATAAGCCAATAAAATTTTA+TGG | + | chr5_2:28032627-28032646 | Msa0766410:intron | 15.0% |
| !! | AATACATGTAGTTATATTAT+CGG | + | chr5_2:28032548-28032567 | Msa0766410:intron | 15.0% |
| !!! | TATAAGCCAATAAAATTTTA+TGG | + | chr5_2:28032627-28032646 | Msa0766410:intron | 15.0% |
| !!! | TTCAAATTTTTCGTCTTTTT+TGG | + | chr5_2:28032117-28032136 | Msa0766410:intron | 20.0% |
| !!! | TATGAGCCATAAAATTTTAT+TGG | - | chr5_2:28032636-28032655 | None:intergenic | 20.0% |
| !!! | AAATTTTATGGCTCATATTT+TGG | + | chr5_2:28032639-28032658 | Msa0766410:intron | 20.0% |
| !! | AACCAAATAAACTAACTTTA+AGG | + | chr5_2:28033338-28033357 | Msa0766410:CDS | 20.0% |
| !!! | TTCCTTAAAGTTAGTTTATT+TGG | - | chr5_2:28033343-28033362 | None:intergenic | 20.0% |
| !!! | TTCAAATTTTTCGTCTTTTT+TGG | + | chr5_2:28032117-28032136 | Msa0766410:intron | 20.0% |
| !!! | TATGAGCCATAAAATTTTAT+TGG | - | chr5_2:28032636-28032655 | None:intergenic | 20.0% |
| !!! | AAATTTTATGGCTCATATTT+TGG | + | chr5_2:28032639-28032658 | Msa0766410:intron | 20.0% |
| !! | AACCAAATAAACTAACTTTA+AGG | + | chr5_2:28033338-28033357 | Msa0766410:CDS | 20.0% |
| !!! | TTCCTTAAAGTTAGTTTATT+TGG | - | chr5_2:28033343-28033362 | None:intergenic | 20.0% |
| !! | AATTCAACCATAAAGCTTTT+TGG | + | chr5_2:28031842-28031861 | Msa0766410:CDS | 25.0% |
| !! | ATTCAACCATAAAGCTTTTT+GGG | + | chr5_2:28031843-28031862 | Msa0766410:CDS | 25.0% |
| ! | TTCTGTTCGAAAAATATACA+CGG | + | chr5_2:28032220-28032239 | Msa0766410:intron | 25.0% |
| !!! | TATATTTTGATCCTAACATG+AGG | - | chr5_2:28032332-28032351 | None:intergenic | 25.0% |
| ! | AAACAACAGAAAATTCATGT+TGG | - | chr5_2:28032437-28032456 | None:intergenic | 25.0% |
| ! | AACAGCTATATATCAATTTC+AGG | + | chr5_2:28032670-28032689 | Msa0766410:intron | 25.0% |
| !!! | AGTTTGTTCATCAATTTTAG+TGG | - | chr5_2:28032831-28032850 | None:intergenic | 25.0% |
| ! | AATGCTATATTTGGATAGAT+TGG | - | chr5_2:28033259-28033278 | None:intergenic | 25.0% |
| ! | TATCCAAATATAGCATTCTA+TGG | + | chr5_2:28033262-28033281 | Msa0766410:CDS | 25.0% |
| ! | TATGGTTGAATTGTTTATCA+TGG | - | chr5_2:28031834-28031853 | Msa0766400:intron | 25.0% |
| !! | AATTCAACCATAAAGCTTTT+TGG | + | chr5_2:28031842-28031861 | Msa0766410:CDS | 25.0% |
| !! | ATTCAACCATAAAGCTTTTT+GGG | + | chr5_2:28031843-28031862 | Msa0766410:CDS | 25.0% |
| ! | TTCTGTTCGAAAAATATACA+CGG | + | chr5_2:28032220-28032239 | Msa0766410:intron | 25.0% |
| !!! | TATATTTTGATCCTAACATG+AGG | - | chr5_2:28032332-28032351 | None:intergenic | 25.0% |
| ! | AAACAACAGAAAATTCATGT+TGG | - | chr5_2:28032437-28032456 | None:intergenic | 25.0% |
| ! | AACAGCTATATATCAATTTC+AGG | + | chr5_2:28032670-28032689 | Msa0766410:intron | 25.0% |
| !!! | AGTTTGTTCATCAATTTTAG+TGG | - | chr5_2:28032831-28032850 | None:intergenic | 25.0% |
| ! | AATGCTATATTTGGATAGAT+TGG | - | chr5_2:28033259-28033278 | None:intergenic | 25.0% |
| ! | TATCCAAATATAGCATTCTA+TGG | + | chr5_2:28033262-28033281 | Msa0766410:CDS | 25.0% |
| AATAGTAGGAGTAAATTCTG+AGG | - | chr5_2:28031918-28031937 | Msa0766400:intron | 30.0% | |
| AAATCTTCATGAGCAATAGT+AGG | - | chr5_2:28031932-28031951 | Msa0766400:intron | 30.0% | |
| ACATGATGCAAAGAGATATA+AGG | + | chr5_2:28032018-28032037 | Msa0766410:CDS | 30.0% | |
| TTCTTCAAATAGAATCACCA+TGG | - | chr5_2:28032055-28032074 | None:intergenic | 30.0% | |
| AAAATATGTTGCTAGCTAGT+AGG | + | chr5_2:28032089-28032108 | Msa0766410:intron | 30.0% | |
| ! | GTTGATGAAATTGTTCATCA+AGG | + | chr5_2:28032242-28032261 | Msa0766410:intron | 30.0% |
| TATATGAGAAACCTCATGTT+AGG | + | chr5_2:28032318-28032337 | Msa0766410:intron | 30.0% | |
| AATAGTAACAAGAACCTTGA+TGG | - | chr5_2:28032369-28032388 | None:intergenic | 30.0% | |
| ! | CTCTCTTTATATTTGTTGGT+AGG | - | chr5_2:28032397-28032416 | None:intergenic | 30.0% |
| GCATCTCTCTTTATATTTGT+TGG | - | chr5_2:28032401-28032420 | None:intergenic | 30.0% | |
| !! | AAGAGAGATGCTTTTTATCA+AGG | + | chr5_2:28032410-28032429 | Msa0766410:intron | 30.0% |
| ! | TACATGTATTGACATCATGT+TGG | - | chr5_2:28032538-28032557 | None:intergenic | 30.0% |
| AGTGAAGTTGAAGACATAAT+AGG | - | chr5_2:28033133-28033152 | None:intergenic | 30.0% | |
| TCAACTTCACTTCACAAAAA+AGG | + | chr5_2:28033142-28033161 | Msa0766410:CDS | 30.0% | |
| CAACTTCACTTCACAAAAAA+GGG | + | chr5_2:28033143-28033162 | Msa0766410:CDS | 30.0% | |
| TTAAGGAAACATTCAAGAGA+TGG | + | chr5_2:28033355-28033374 | Msa0766410:CDS | 30.0% | |
| TAAGGAAACATTCAAGAGAT+GGG | + | chr5_2:28033356-28033375 | Msa0766410:CDS | 30.0% | |
| ATCTTTCGTTCAAAGAATGA+TGG | + | chr5_2:28033385-28033404 | Msa0766410:CDS | 30.0% | |
| TTCCATGAGATGATTTGATT+TGG | + | chr5_2:28033463-28033482 | Msa0766410:exon | 30.0% | |
| TTCCAAATCAAATCATCTCA+TGG | - | chr5_2:28033468-28033487 | None:intergenic | 30.0% | |
| !! | GAGATGATTTGATTTGGAAT+AGG | + | chr5_2:28033469-28033488 | Msa0766410:exon | 30.0% |
| AATAGTAGGAGTAAATTCTG+AGG | - | chr5_2:28031918-28031937 | Msa0766400:intron | 30.0% | |
| AAATCTTCATGAGCAATAGT+AGG | - | chr5_2:28031932-28031951 | Msa0766400:intron | 30.0% | |
| ACATGATGCAAAGAGATATA+AGG | + | chr5_2:28032018-28032037 | Msa0766410:CDS | 30.0% | |
| TTCTTCAAATAGAATCACCA+TGG | - | chr5_2:28032055-28032074 | None:intergenic | 30.0% | |
| AAAATATGTTGCTAGCTAGT+AGG | + | chr5_2:28032089-28032108 | Msa0766410:intron | 30.0% | |
| ! | GTTGATGAAATTGTTCATCA+AGG | + | chr5_2:28032242-28032261 | Msa0766410:intron | 30.0% |
| TATATGAGAAACCTCATGTT+AGG | + | chr5_2:28032318-28032337 | Msa0766410:intron | 30.0% | |
| AATAGTAACAAGAACCTTGA+TGG | - | chr5_2:28032369-28032388 | None:intergenic | 30.0% | |
| ! | CTCTCTTTATATTTGTTGGT+AGG | - | chr5_2:28032397-28032416 | None:intergenic | 30.0% |
| GCATCTCTCTTTATATTTGT+TGG | - | chr5_2:28032401-28032420 | None:intergenic | 30.0% | |
| !! | AAGAGAGATGCTTTTTATCA+AGG | + | chr5_2:28032410-28032429 | Msa0766410:intron | 30.0% |
| ! | TACATGTATTGACATCATGT+TGG | - | chr5_2:28032538-28032557 | None:intergenic | 30.0% |
| AGTGAAGTTGAAGACATAAT+AGG | - | chr5_2:28033133-28033152 | None:intergenic | 30.0% | |
| TCAACTTCACTTCACAAAAA+AGG | + | chr5_2:28033142-28033161 | Msa0766410:CDS | 30.0% | |
| CAACTTCACTTCACAAAAAA+GGG | + | chr5_2:28033143-28033162 | Msa0766410:CDS | 30.0% | |
| TTAAGGAAACATTCAAGAGA+TGG | + | chr5_2:28033355-28033374 | Msa0766410:CDS | 30.0% | |
| TAAGGAAACATTCAAGAGAT+GGG | + | chr5_2:28033356-28033375 | Msa0766410:CDS | 30.0% | |
| ATCTTTCGTTCAAAGAATGA+TGG | + | chr5_2:28033385-28033404 | Msa0766410:CDS | 30.0% | |
| TTCCATGAGATGATTTGATT+TGG | + | chr5_2:28033463-28033482 | Msa0766410:exon | 30.0% | |
| TTCCAAATCAAATCATCTCA+TGG | - | chr5_2:28033468-28033487 | None:intergenic | 30.0% | |
| !! | GAGATGATTTGATTTGGAAT+AGG | + | chr5_2:28033469-28033488 | Msa0766410:exon | 30.0% |
| GTTGAAGAATTCACTTCAAG+TGG | - | chr5_2:28031995-28032014 | Msa0766400:CDS | 35.0% | |
| ATCAAGAAAAGAACTCATCG+AGG | + | chr5_2:28032697-28032716 | Msa0766410:CDS | 35.0% | |
| TCAATAAGGCTTGAAGATGT+GGG | - | chr5_2:28032761-28032780 | None:intergenic | 35.0% | |
| !!! | GAGTTTTCAGGTTCTCAATA+AGG | - | chr5_2:28032775-28032794 | None:intergenic | 35.0% |
| GCAAAAATTGCCAAAGATAC+TGG | + | chr5_2:28032975-28032994 | Msa0766410:CDS | 35.0% | |
| ACCACGAGAAATATGCTTAT+AGG | + | chr5_2:28033010-28033029 | Msa0766410:CDS | 35.0% | |
| AAGAAGAGATTCTGTTCTTG+CGG | - | chr5_2:28033045-28033064 | None:intergenic | 35.0% | |
| !! | ACTCATTTGATGATGATGTG+AGG | - | chr5_2:28033083-28033102 | None:intergenic | 35.0% |
| ! | ATGAGTACTGTCTTGACATT+TGG | + | chr5_2:28033097-28033116 | Msa0766410:CDS | 35.0% |
| TACTGTCTTGACATTTGGAT+CGG | + | chr5_2:28033102-28033121 | Msa0766410:CDS | 35.0% | |
| CTTCACAAAAAAGGGAATGT+TGG | + | chr5_2:28033151-28033170 | Msa0766410:CDS | 35.0% | |
| ATATTTGGATAGATTGGCAC+AGG | - | chr5_2:28033253-28033272 | None:intergenic | 35.0% | |
| CCACCATAGAATGCTATATT+TGG | - | chr5_2:28033268-28033287 | None:intergenic | 35.0% | |
| CCAAATATAGCATTCTATGG+TGG | + | chr5_2:28033265-28033284 | Msa0766410:CDS | 35.0% | |
| TTCATTAGACTGTGTTGAGA+TGG | - | chr5_2:28033320-28033339 | None:intergenic | 35.0% | |
| AAGGAAACATTCAAGAGATG+GGG | + | chr5_2:28033357-28033376 | Msa0766410:CDS | 35.0% | |
| TTTCGTTCAAAGAATGATGG+AGG | + | chr5_2:28033388-28033407 | Msa0766410:CDS | 35.0% | |
| GTTGAAGAATTCACTTCAAG+TGG | - | chr5_2:28031995-28032014 | Msa0766400:CDS | 35.0% | |
| ATCAAGAAAAGAACTCATCG+AGG | + | chr5_2:28032697-28032716 | Msa0766410:CDS | 35.0% | |
| TCAATAAGGCTTGAAGATGT+GGG | - | chr5_2:28032761-28032780 | None:intergenic | 35.0% | |
| !!! | GAGTTTTCAGGTTCTCAATA+AGG | - | chr5_2:28032775-28032794 | None:intergenic | 35.0% |
| GCAAAAATTGCCAAAGATAC+TGG | + | chr5_2:28032975-28032994 | Msa0766410:CDS | 35.0% | |
| ACCACGAGAAATATGCTTAT+AGG | + | chr5_2:28033010-28033029 | Msa0766410:CDS | 35.0% | |
| AAGAAGAGATTCTGTTCTTG+CGG | - | chr5_2:28033045-28033064 | None:intergenic | 35.0% | |
| !! | ACTCATTTGATGATGATGTG+AGG | - | chr5_2:28033083-28033102 | None:intergenic | 35.0% |
| ! | ATGAGTACTGTCTTGACATT+TGG | + | chr5_2:28033097-28033116 | Msa0766410:CDS | 35.0% |
| TACTGTCTTGACATTTGGAT+CGG | + | chr5_2:28033102-28033121 | Msa0766410:CDS | 35.0% | |
| CTTCACAAAAAAGGGAATGT+TGG | + | chr5_2:28033151-28033170 | Msa0766410:CDS | 35.0% | |
| ATATTTGGATAGATTGGCAC+AGG | - | chr5_2:28033253-28033272 | None:intergenic | 35.0% | |
| CCACCATAGAATGCTATATT+TGG | - | chr5_2:28033268-28033287 | None:intergenic | 35.0% | |
| CCAAATATAGCATTCTATGG+TGG | + | chr5_2:28033265-28033284 | Msa0766410:CDS | 35.0% | |
| TTCATTAGACTGTGTTGAGA+TGG | - | chr5_2:28033320-28033339 | None:intergenic | 35.0% | |
| AAGGAAACATTCAAGAGATG+GGG | + | chr5_2:28033357-28033376 | Msa0766410:CDS | 35.0% | |
| TTTCGTTCAAAGAATGATGG+AGG | + | chr5_2:28033388-28033407 | Msa0766410:CDS | 35.0% | |
| CGTTCTCCCAAAAAGCTTTA+TGG | - | chr5_2:28031852-28031871 | Msa0766400:intron | 40.0% | |
| CAAATAGAATCACCATGGCA+TGG | - | chr5_2:28032050-28032069 | None:intergenic | 40.0% | |
| TGAGTTTCACTGCGATTTCT+CGG | + | chr5_2:28032181-28032200 | Msa0766410:intron | 40.0% | |
| TGAAAGAGATCTGTCCATCA+AGG | + | chr5_2:28032352-28032371 | Msa0766410:intron | 40.0% | |
| CTCGATGTTTGTGTATGTGT+CGG | + | chr5_2:28032578-28032597 | Msa0766410:intron | 40.0% | |
| AAAAGAACTCATCGAGGATG+CGG | + | chr5_2:28032703-28032722 | Msa0766410:CDS | 40.0% | |
| ATTCTGAATCCTCTGTGGTT+TGG | - | chr5_2:28032736-28032755 | None:intergenic | 40.0% | |
| CTCAATAAGGCTTGAAGATG+TGG | - | chr5_2:28032762-28032781 | None:intergenic | 40.0% | |
| ! | TTTCAGATGAGGGAGTTTTC+AGG | - | chr5_2:28032787-28032806 | None:intergenic | 40.0% |
| ! | ACAACTTGGTCTGGTTTCTT+TGG | - | chr5_2:28032875-28032894 | None:intergenic | 40.0% |
| ATCTTGGACATGGAACAACT+TGG | - | chr5_2:28032889-28032908 | None:intergenic | 40.0% | |
| ATGTCCAAGATGCAAAAGCA+CGG | + | chr5_2:28032898-28032917 | Msa0766410:CDS | 40.0% | |
| !!! | CAATTTTTGCAGAAGTGTCG+AGG | - | chr5_2:28032965-28032984 | None:intergenic | 40.0% |
| GCCTATAAGCATATTTCTCG+TGG | - | chr5_2:28033014-28033033 | None:intergenic | 40.0% | |
| AGAAATATGCTTATAGGCGC+AGG | + | chr5_2:28033016-28033035 | Msa0766410:CDS | 40.0% | |
| ! | GTTTTCCTCAACAGTTTCCA+TGG | + | chr5_2:28033209-28033228 | Msa0766410:CDS | 40.0% |
| TAACACATAGCAGGATTCCA+TGG | - | chr5_2:28033229-28033248 | None:intergenic | 40.0% | |
| AGCATTCTATGGTGGTTGTT+TGG | + | chr5_2:28033273-28033292 | Msa0766410:CDS | 40.0% | |
| ! | AATGATGGAGGACTTTCCAA+GGG | + | chr5_2:28033400-28033419 | Msa0766410:CDS | 40.0% |
| CGTTCTCCCAAAAAGCTTTA+TGG | - | chr5_2:28031852-28031871 | Msa0766400:intron | 40.0% | |
| CAAATAGAATCACCATGGCA+TGG | - | chr5_2:28032050-28032069 | None:intergenic | 40.0% | |
| TGAGTTTCACTGCGATTTCT+CGG | + | chr5_2:28032181-28032200 | Msa0766410:intron | 40.0% | |
| TGAAAGAGATCTGTCCATCA+AGG | + | chr5_2:28032352-28032371 | Msa0766410:intron | 40.0% | |
| CTCGATGTTTGTGTATGTGT+CGG | + | chr5_2:28032578-28032597 | Msa0766410:intron | 40.0% | |
| AAAAGAACTCATCGAGGATG+CGG | + | chr5_2:28032703-28032722 | Msa0766410:CDS | 40.0% | |
| ATTCTGAATCCTCTGTGGTT+TGG | - | chr5_2:28032736-28032755 | None:intergenic | 40.0% | |
| CTCAATAAGGCTTGAAGATG+TGG | - | chr5_2:28032762-28032781 | None:intergenic | 40.0% | |
| ! | TTTCAGATGAGGGAGTTTTC+AGG | - | chr5_2:28032787-28032806 | None:intergenic | 40.0% |
| ! | ACAACTTGGTCTGGTTTCTT+TGG | - | chr5_2:28032875-28032894 | None:intergenic | 40.0% |
| ATCTTGGACATGGAACAACT+TGG | - | chr5_2:28032889-28032908 | None:intergenic | 40.0% | |
| ATGTCCAAGATGCAAAAGCA+CGG | + | chr5_2:28032898-28032917 | Msa0766410:CDS | 40.0% | |
| !!! | CAATTTTTGCAGAAGTGTCG+AGG | - | chr5_2:28032965-28032984 | None:intergenic | 40.0% |
| GCCTATAAGCATATTTCTCG+TGG | - | chr5_2:28033014-28033033 | None:intergenic | 40.0% | |
| AGAAATATGCTTATAGGCGC+AGG | + | chr5_2:28033016-28033035 | Msa0766410:CDS | 40.0% | |
| ! | GTTTTCCTCAACAGTTTCCA+TGG | + | chr5_2:28033209-28033228 | Msa0766410:CDS | 40.0% |
| TAACACATAGCAGGATTCCA+TGG | - | chr5_2:28033229-28033248 | None:intergenic | 40.0% | |
| AGCATTCTATGGTGGTTGTT+TGG | + | chr5_2:28033273-28033292 | Msa0766410:CDS | 40.0% | |
| ! | AATGATGGAGGACTTTCCAA+GGG | + | chr5_2:28033400-28033419 | Msa0766410:CDS | 40.0% |
| ATAAGGTATGTGCCATGCCA+TGG | + | chr5_2:28032035-28032054 | Msa0766410:intron | 45.0% | |
| GAGTTTCACTGCGATTTCTC+GGG | + | chr5_2:28032182-28032201 | Msa0766410:intron | 45.0% | |
| AGTTTCACTGCGATTTCTCG+GGG | + | chr5_2:28032183-28032202 | Msa0766410:intron | 45.0% | |
| GACGTCTCTGTTTCAGATGA+GGG | - | chr5_2:28032797-28032816 | None:intergenic | 45.0% | |
| AGACGTCTCTGTTTCAGATG+AGG | - | chr5_2:28032798-28032817 | None:intergenic | 45.0% | |
| ! | GTGCTTTTGCATCTTGGACA+TGG | - | chr5_2:28032899-28032918 | None:intergenic | 45.0% |
| TGCCAAAGATACTGGACTTC+TGG | + | chr5_2:28032983-28033002 | Msa0766410:CDS | 45.0% | |
| CTCCAGAAGTCCAGTATCTT+TGG | - | chr5_2:28032988-28033007 | None:intergenic | 45.0% | |
| CAAAGATACTGGACTTCTGG+AGG | + | chr5_2:28032986-28033005 | Msa0766410:CDS | 45.0% | |
| GGATTCCATGGAAACTGTTG+AGG | - | chr5_2:28033217-28033236 | None:intergenic | 45.0% | |
| GTGGTTGTTTGGTACCATCT+TGG | + | chr5_2:28033284-28033303 | Msa0766410:CDS | 45.0% | |
| ! | ATGGATTGTACGCTCCAAGA+TGG | - | chr5_2:28033301-28033320 | None:intergenic | 45.0% |
| ! | GAATGATGGAGGACTTTCCA+AGG | + | chr5_2:28033399-28033418 | Msa0766410:CDS | 45.0% |
| AGCGTTAGAAGCAAAACCCT+TGG | - | chr5_2:28033419-28033438 | None:intergenic | 45.0% | |
| ! | CTAACGCTGCAGCTTTATCA+AGG | + | chr5_2:28033431-28033450 | Msa0766410:CDS | 45.0% |
| ATAAGGTATGTGCCATGCCA+TGG | + | chr5_2:28032035-28032054 | Msa0766410:intron | 45.0% | |
| GAGTTTCACTGCGATTTCTC+GGG | + | chr5_2:28032182-28032201 | Msa0766410:intron | 45.0% | |
| AGTTTCACTGCGATTTCTCG+GGG | + | chr5_2:28032183-28032202 | Msa0766410:intron | 45.0% | |
| GACGTCTCTGTTTCAGATGA+GGG | - | chr5_2:28032797-28032816 | None:intergenic | 45.0% | |
| AGACGTCTCTGTTTCAGATG+AGG | - | chr5_2:28032798-28032817 | None:intergenic | 45.0% | |
| ! | GTGCTTTTGCATCTTGGACA+TGG | - | chr5_2:28032899-28032918 | None:intergenic | 45.0% |
| TGCCAAAGATACTGGACTTC+TGG | + | chr5_2:28032983-28033002 | Msa0766410:CDS | 45.0% | |
| CTCCAGAAGTCCAGTATCTT+TGG | - | chr5_2:28032988-28033007 | None:intergenic | 45.0% | |
| CAAAGATACTGGACTTCTGG+AGG | + | chr5_2:28032986-28033005 | Msa0766410:CDS | 45.0% | |
| GGATTCCATGGAAACTGTTG+AGG | - | chr5_2:28033217-28033236 | None:intergenic | 45.0% | |
| GTGGTTGTTTGGTACCATCT+TGG | + | chr5_2:28033284-28033303 | Msa0766410:CDS | 45.0% | |
| ! | ATGGATTGTACGCTCCAAGA+TGG | - | chr5_2:28033301-28033320 | None:intergenic | 45.0% |
| ! | GAATGATGGAGGACTTTCCA+AGG | + | chr5_2:28033399-28033418 | Msa0766410:CDS | 45.0% |
| AGCGTTAGAAGCAAAACCCT+TGG | - | chr5_2:28033419-28033438 | None:intergenic | 45.0% | |
| ! | CTAACGCTGCAGCTTTATCA+AGG | + | chr5_2:28033431-28033450 | Msa0766410:CDS | 45.0% |
| GGCTTCATTCCAAACCACAG+AGG | + | chr5_2:28032724-28032743 | Msa0766410:CDS | 50.0% | |
| GGGAGATTCTGAATCCTCTG+TGG | - | chr5_2:28032741-28032760 | None:intergenic | 50.0% | |
| GGACATGGAACAACTTGGTC+TGG | - | chr5_2:28032884-28032903 | None:intergenic | 50.0% | |
| ! | GTGTCCGTGCTTTTGCATCT+TGG | - | chr5_2:28032905-28032924 | None:intergenic | 50.0% |
| GGCACAGGATAACACATAGC+AGG | - | chr5_2:28033238-28033257 | None:intergenic | 50.0% | |
| GGCTTCATTCCAAACCACAG+AGG | + | chr5_2:28032724-28032743 | Msa0766410:CDS | 50.0% | |
| GGGAGATTCTGAATCCTCTG+TGG | - | chr5_2:28032741-28032760 | None:intergenic | 50.0% | |
| GGACATGGAACAACTTGGTC+TGG | - | chr5_2:28032884-28032903 | None:intergenic | 50.0% | |
| ! | GTGTCCGTGCTTTTGCATCT+TGG | - | chr5_2:28032905-28032924 | None:intergenic | 50.0% |
| GGCACAGGATAACACATAGC+AGG | - | chr5_2:28033238-28033257 | None:intergenic | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 28031833 | 28033504 | 28031833 | ID=Msa0766410;Name=Msa0766410 |
| chr5_2 | mRNA | 28031833 | 28033504 | 28031833 | ID=Msa0766410-mRNA-1;Parent=Msa0766410;Name=Msa0766410-mRNA-1;_AED=0.30;_eAED=0.30;_QI=0|1|0.5|1|1|0.5|2|24|331 |
| chr5_2 | exon | 28031833 | 28032039 | 28031833 | ID=Msa0766410-mRNA-1:exon:10883;Parent=Msa0766410-mRNA-1 |
| chr5_2 | exon | 28032692 | 28033504 | 28032692 | ID=Msa0766410-mRNA-1:exon:10884;Parent=Msa0766410-mRNA-1 |
| chr5_2 | CDS | 28031833 | 28032039 | 28031833 | ID=Msa0766410-mRNA-1:cds;Parent=Msa0766410-mRNA-1 |
| chr5_2 | CDS | 28032692 | 28033480 | 28032692 | ID=Msa0766410-mRNA-1:cds;Parent=Msa0766410-mRNA-1 |
| chr5_2 | three_prime_UTR | 28033481 | 28033504 | 28033481 | ID=Msa0766410-mRNA-1:three_prime_utr;Parent=Msa0766410-mRNA-1 |
| Gene Sequence |
| Protein sequence |
