Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0767310 | sp|P11869|TPT_SPIOL | 70.882 | 340 | 68 | 2 | 60 | 377 | 70 | 400 | 9.29e-170 | 483 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0767310 | G7JWT8 | 90.220 | 409 | 15 | 3 | 1 | 384 | 1 | 409 | 0.0 | 723 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0722730 | Msa0767310 | 0.874931 | 4.590999e-68 | -8.615850e-47 |
| Msa0767310 | Msa0846870 | 0.882781 | 7.807017e-71 | -8.615850e-47 |
| Msa0767310 | Msa1160540 | 0.800048 | 1.730483e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0767310 | MtrunA17_Chr5g0419001 | 90.220 | 409 | 15 | 3 | 1 | 384 | 1 | 409 | 0.0 | 723 |
| Msa0767310 | MtrunA17_Chr4g0046561 | 70.538 | 353 | 72 | 4 | 51 | 381 | 59 | 401 | 2.44e-170 | 481 |
| Msa0767310 | MtrunA17_Chr3g0097931 | 41.065 | 263 | 146 | 4 | 111 | 368 | 142 | 400 | 5.55e-57 | 191 |
| Msa0767310 | MtrunA17_Chr2g0288011 | 39.706 | 272 | 155 | 3 | 104 | 370 | 129 | 396 | 2.43e-56 | 189 |
| Msa0767310 | MtrunA17_Chr4g0074541 | 40.370 | 270 | 152 | 3 | 104 | 368 | 126 | 391 | 7.09e-55 | 185 |
| Msa0767310 | MtrunA17_Chr2g0291851 | 37.423 | 326 | 170 | 8 | 65 | 365 | 75 | 391 | 8.58e-54 | 183 |
| Msa0767310 | MtrunA17_Chr4g0058971 | 38.610 | 259 | 147 | 3 | 117 | 368 | 123 | 376 | 1.55e-50 | 174 |
| Msa0767310 | MtrunA17_Chr3g0117501 | 38.267 | 277 | 164 | 3 | 106 | 378 | 137 | 410 | 2.46e-49 | 171 |
| Msa0767310 | MtrunA17_Chr6g0449891 | 39.175 | 291 | 158 | 7 | 96 | 379 | 140 | 418 | 2.09e-46 | 164 |
| Msa0767310 | MtrunA17_Chr1g0160071 | 26.407 | 231 | 164 | 2 | 146 | 374 | 85 | 311 | 1.70e-18 | 85.9 |
| Msa0767310 | MtrunA17_Chr3g0114581 | 26.407 | 231 | 164 | 2 | 146 | 374 | 86 | 312 | 2.80e-18 | 85.1 |
| Msa0767310 | MtrunA17_Chr4g0008071 | 28.571 | 308 | 162 | 14 | 91 | 376 | 37 | 308 | 1.04e-12 | 68.2 |
| Msa0767310 | MtrunA17_Chr3g0112981 | 26.441 | 295 | 185 | 11 | 91 | 376 | 49 | 320 | 2.23e-11 | 64.3 |
| Msa0767310 | MtrunA17_Chr5g0436341 | 26.871 | 294 | 185 | 11 | 91 | 376 | 33 | 304 | 6.02e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0767310 | AT5G46110.1 | 69.855 | 345 | 72 | 3 | 60 | 381 | 75 | 410 | 1.82e-168 | 477 |
| Msa0767310 | AT5G46110.4 | 70.588 | 340 | 68 | 3 | 60 | 376 | 75 | 405 | 8.57e-168 | 476 |
| Msa0767310 | AT5G46110.2 | 78.723 | 282 | 60 | 0 | 100 | 381 | 16 | 297 | 8.70e-166 | 466 |
| Msa0767310 | AT5G46110.3 | 67.536 | 345 | 69 | 4 | 60 | 381 | 75 | 399 | 6.45e-159 | 452 |
| Msa0767310 | AT5G54800.1 | 36.119 | 335 | 183 | 5 | 61 | 368 | 57 | 387 | 5.50e-58 | 194 |
| Msa0767310 | AT1G61800.1 | 40.370 | 270 | 152 | 3 | 104 | 368 | 122 | 387 | 1.10e-56 | 190 |
| Msa0767310 | AT1G61800.2 | 40.000 | 270 | 153 | 3 | 104 | 368 | 122 | 387 | 3.53e-56 | 189 |
| Msa0767310 | AT5G17630.1 | 39.925 | 268 | 149 | 6 | 114 | 375 | 147 | 408 | 1.07e-54 | 186 |
| Msa0767310 | AT3G01550.1 | 39.350 | 277 | 154 | 3 | 96 | 368 | 106 | 372 | 6.96e-47 | 164 |
| Msa0767310 | AT5G33320.1 | 35.897 | 273 | 168 | 3 | 110 | 378 | 139 | 408 | 4.41e-42 | 152 |
| Msa0767310 | AT3G01550.2 | 37.906 | 277 | 153 | 4 | 96 | 368 | 106 | 367 | 6.38e-41 | 149 |
| Msa0767310 | AT4G03950.1 | 36.626 | 243 | 106 | 12 | 139 | 374 | 58 | 259 | 1.02e-26 | 108 |
| Msa0767310 | AT1G77610.1 | 26.407 | 231 | 164 | 2 | 146 | 374 | 80 | 306 | 1.72e-17 | 83.2 |
| Msa0767310 | AT1G21870.1 | 26.724 | 232 | 164 | 3 | 146 | 375 | 86 | 313 | 2.89e-16 | 79.7 |
| Msa0767310 | AT3G11320.1 | 26.280 | 293 | 188 | 9 | 91 | 376 | 35 | 306 | 5.08e-13 | 69.7 |
| Msa0767310 | AT5G05820.1 | 25.510 | 294 | 191 | 9 | 91 | 377 | 35 | 307 | 5.27e-11 | 63.5 |
Find 89 sgRNAs with CRISPR-Local
Find 275 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCATCTAATGGTTGAAATTA+AGG | 0.197861 | 5_2:+30316418 | Msa0767310:intron |
| GGACCCCAACTGATGGAATT+TGG | 0.212279 | 5_2:+30314526 | Msa0767310:CDS |
| CTTTCCTTTATCAGCAATAT+TGG | 0.247686 | 5_2:+30315409 | Msa0767310:three_prime_UTR |
| ATAAATTTATGAGAAGAATT+TGG | 0.273849 | 5_2:+30315443 | Msa0767310:three_prime_UTR |
| AAATTTCCTGCATTGGTTAC+TGG | 0.274557 | 5_2:+30312149 | Msa0767310:CDS |
| GGCCTAAACCCCAGCTAAAA+AGG | 0.277465 | 5_2:-30312618 | None:intergenic |
| TGCTTTAATCACTGAATAGA+TGG | 0.293194 | 5_2:-30315232 | None:intergenic |
| TGATCCAATATTGCTGATAA+AGG | 0.300947 | 5_2:-30315413 | None:intergenic |
| AAAAGAGTTTCAACCAGTTA+TGG | 0.329715 | 5_2:+30311690 | Msa0767310:CDS |
| TCAGCTTCCCAGTTTGTCTT+AGG | 0.336546 | 5_2:+30313696 | Msa0767310:CDS |
| AACAAGAGCTCTTTATTCAT+TGG | 0.337014 | 5_2:-30313018 | None:intergenic |
| ATACTTCAACAATCCATAAC+TGG | 0.344856 | 5_2:-30311703 | None:intergenic |
| TTTCTCACCAAAACTCTTTG+AGG | 0.348207 | 5_2:-30312129 | None:intergenic |
| GGTACTGCTATTGCAATTGC+TGG | 0.350916 | 5_2:+30315204 | Msa0767310:CDS |
| GCAGCTTGCTACTAATACTT+TGG | 0.357987 | 5_2:+30314757 | Msa0767310:intron |
| GCTGCTAAGGCTGCAACAAC+TGG | 0.364005 | 5_2:-30311810 | None:intergenic |
| AAAATGTAGTGAAAACAATA+TGG | 0.366239 | 5_2:+30315642 | Msa0767310:three_prime_UTR |
| GTCCAATCCTCAAAGAGTTT+TGG | 0.368718 | 5_2:+30312122 | Msa0767310:CDS |
| CTTTGAACTGATATGAGAAC+TGG | 0.370164 | 5_2:-30311636 | None:intergenic |
| TTTCCAACTGCATGTGTTAG+TGG | 0.372398 | 5_2:-30314791 | None:intergenic |
| AATGAACTTACAAGAATTGC+TGG | 0.376233 | 5_2:-30314255 | None:intergenic |
| TATGTTGGCCTAAGACAAAC+TGG | 0.377774 | 5_2:-30313704 | None:intergenic |
| CACCAAAACTCTTTGAGGAT+TGG | 0.379697 | 5_2:-30312124 | None:intergenic |
| TGACTGAACTGTCTTTCAAT+TGG | 0.389095 | 5_2:+30313991 | Msa0767310:CDS |
| AAGCTTGGTGTTCTCTCCAT+TGG | 0.390631 | 5_2:+30311755 | Msa0767310:CDS |
| TGTCATTGGATTCTCTATAG+TGG | 0.400424 | 5_2:+30314832 | Msa0767310:CDS |
| TCTCCATTGGTGAAGGCGTT+GGG | 0.401683 | 5_2:+30311768 | Msa0767310:CDS |
| AAATCCAAATTCCATCAGTT+GGG | 0.406228 | 5_2:-30314530 | None:intergenic |
| GGATTCTCTATAGTGGTGTT+TGG | 0.406870 | 5_2:+30314839 | Msa0767310:CDS |
| CATCTAATGGTTGAAATTAA+GGG | 0.408534 | 5_2:+30316419 | Msa0767310:intron |
| CTGCAGCCCTTACATCTTAA+CGG | 0.410285 | 5_2:+30315381 | Msa0767310:CDS |
| CTCTCCATTGGTGAAGGCGT+TGG | 0.411785 | 5_2:+30311767 | Msa0767310:CDS |
| TTGGATGCTTCTTAGATTGA+AGG | 0.415979 | 5_2:+30314505 | Msa0767310:intron |
| TAAATCCAAATTCCATCAGT+TGG | 0.423055 | 5_2:-30314531 | None:intergenic |
| GGTGAAATTGAAATCTCTAA+TGG | 0.426650 | 5_2:+30311846 | Msa0767310:CDS |
| AACAAGATATCCACACAAAC+TGG | 0.434241 | 5_2:+30315177 | Msa0767310:CDS |
| GTGAAATTGAAATCTCTAAT+GGG | 0.435720 | 5_2:+30311847 | Msa0767310:CDS |
| TCTGTTGTACATCTCCTAGT+GGG | 0.441652 | 5_2:+30312583 | Msa0767310:CDS |
| AGAGCGTCCGTTAAGATGTA+AGG | 0.446459 | 5_2:-30315388 | None:intergenic |
| AAACTTTGTCAGTCCTACTT+TGG | 0.455678 | 5_2:-30314566 | None:intergenic |
| AGAAATGCTATTGCCAAAGT+AGG | 0.458021 | 5_2:+30314553 | Msa0767310:CDS |
| GTATAACTCACTGCACGCTT+TGG | 0.465875 | 5_2:-30312643 | None:intergenic |
| AGGATACCTGATTGTAAAGA+TGG | 0.470401 | 5_2:-30314621 | None:intergenic |
| AAAAGCTTACCTAAAACAAC+AGG | 0.477777 | 5_2:-30313756 | None:intergenic |
| AAATAAGCTGAAGAAATTTG+AGG | 0.480991 | 5_2:-30311660 | None:intergenic |
| GAACTGTCTTTCAATTGGAC+TGG | 0.483752 | 5_2:+30313996 | Msa0767310:CDS |
| TTATGTTATTTCACTACCTG+TGG | 0.484794 | 5_2:+30315556 | Msa0767310:three_prime_UTR |
| TGGTGAGAAATTTCCTGCAT+TGG | 0.485539 | 5_2:+30312142 | Msa0767310:CDS |
| TTGACTCTTAGGTGTATCAA+TGG | 0.489218 | 5_2:+30313962 | Msa0767310:intron |
| GGTGCTAAGCAACTTATGCT+TGG | 0.490402 | 5_2:-30315619 | None:intergenic |
| ATCATCAGCATCTGCTGCTA+AGG | 0.492326 | 5_2:-30311823 | None:intergenic |
| CAATATTCTTTAGTTTCTCT+AGG | 0.500028 | 5_2:+30315668 | Msa0767310:three_prime_UTR |
| GGTGTTCTCTCCATTGGTGA+AGG | 0.503498 | 5_2:+30311761 | Msa0767310:CDS |
| GTATAGAACACTTCAATATG+AGG | 0.519052 | 5_2:+30311722 | Msa0767310:CDS |
| AACACTTCAATATGAGGCTA+AGG | 0.522461 | 5_2:+30311728 | Msa0767310:CDS |
| AAGAAACCAGTAACCAATGC+AGG | 0.530659 | 5_2:-30312155 | None:intergenic |
| TCAGCAATATTGGATCAAGT+TGG | 0.532581 | 5_2:+30315419 | Msa0767310:three_prime_UTR |
| AACTGATATGAGAACTGGGT+TGG | 0.544158 | 5_2:-30311631 | None:intergenic |
| CGTTGGGAGTAAGACAAAGA+AGG | 0.550850 | 5_2:+30311784 | Msa0767310:CDS |
| ATGAACTTACAAGAATTGCT+GGG | 0.552305 | 5_2:-30314254 | None:intergenic |
| ACTCCCAACGCCTTCACCAA+TGG | 0.553120 | 5_2:-30311771 | None:intergenic |
| CTGTTGTACATCTCCTAGTG+GGG | 0.559205 | 5_2:+30312584 | Msa0767310:CDS |
| TTCTGTTGTACATCTCCTAG+TGG | 0.562692 | 5_2:+30312582 | Msa0767310:CDS |
| GATTGAAGGACCCCAACTGA+TGG | 0.572073 | 5_2:+30314519 | Msa0767310:intron |
| TGAGGCTAAGGATTCAAGCT+TGG | 0.575177 | 5_2:+30311740 | Msa0767310:CDS |
| AAAGATAGCCACAGAGACAG+TGG | 0.579290 | 5_2:-30313729 | None:intergenic |
| ATATCCACACAAACTGGCAT+TGG | 0.586556 | 5_2:+30315183 | Msa0767310:CDS |
| AACATATTCCACTGTCTCTG+TGG | 0.589810 | 5_2:+30313721 | Msa0767310:CDS |
| TACCATAAACTAAAATCCAC+AGG | 0.590270 | 5_2:-30315572 | None:intergenic |
| AGGGCATGACAAAATGCCAC+TGG | 0.594665 | 5_2:-30313051 | None:intergenic |
| TGTTGTACATCTCCTAGTGG+GGG | 0.597775 | 5_2:+30312585 | Msa0767310:CDS |
| ACAGAGACAGTGGAATATGT+TGG | 0.605673 | 5_2:-30313719 | None:intergenic |
| AACTCACTGCACGCTTTGGT+AGG | 0.605690 | 5_2:-30312639 | None:intergenic |
| TCTATATTCTAAGAAAGCAA+TGG | 0.613760 | 5_2:+30314064 | Msa0767310:CDS |
| AGTACCAATGCCAGTTTGTG+TGG | 0.619792 | 5_2:-30315187 | None:intergenic |
| TTAGCAGCAGATGCTGATGA+TGG | 0.621134 | 5_2:+30311825 | Msa0767310:CDS |
| AACAGCAGCAAATGATACAT+TGG | 0.623207 | 5_2:-30313088 | None:intergenic |
| GAGCGTCCGTTAAGATGTAA+GGG | 0.623605 | 5_2:-30315387 | None:intergenic |
| GCGCCACTAACACATGCAGT+TGG | 0.626603 | 5_2:+30314788 | Msa0767310:CDS |
| TGAACTTACAAGAATTGCTG+GGG | 0.628339 | 5_2:-30314253 | None:intergenic |
| AATCCAAATTCCATCAGTTG+GGG | 0.641106 | 5_2:-30314529 | None:intergenic |
| CTTGTTACTATTGACTCCAG+TGG | 0.644188 | 5_2:+30313035 | Msa0767310:CDS |
| TTTGAACTGATATGAGAACT+GGG | 0.645733 | 5_2:-30311635 | None:intergenic |
| CATTGGACATGACATGACCA+AGG | 0.673962 | 5_2:-30313071 | None:intergenic |
| ATTGGACATGACATGACCAA+GGG | 0.677416 | 5_2:-30313070 | None:intergenic |
| GAACTTACAAGAATTGCTGG+GGG | 0.678929 | 5_2:-30314252 | None:intergenic |
| GATGCAGGTAAGAGATACAG+AGG | 0.686962 | 5_2:-30315707 | None:intergenic |
| ATGTTGGCCTAAGACAAACT+GGG | 0.740201 | 5_2:-30313703 | None:intergenic |
| AACTTACAAGAATTGCTGGG+GGG | 0.745212 | 5_2:-30314251 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAGATTAAAACTATATAT+CGG | + | chr5_2:30313306-30313325 | Msa0767310:intron | 10.0% |
| !! | AAAAATCAATAGTAAAATTA+CGG | - | chr5_2:30314461-30314480 | None:intergenic | 10.0% |
| !! | AGTTAAAAAAAATAATATGA+TGG | - | chr5_2:30314969-30314988 | None:intergenic | 10.0% |
| !! | ATAAATAAAGAAAAAATTGT+AGG | - | chr5_2:30315298-30315317 | None:intergenic | 10.0% |
| !!! | ATAATTTTTATTGTTGAAAA+AGG | - | chr5_2:30315970-30315989 | None:intergenic | 10.0% |
| !!! | CCATAAATTTATAATTTTTT+AGG | - | chr5_2:30316293-30316312 | None:intergenic | 10.0% |
| !! | CCTAAAAAATTATAAATTTA+TGG | + | chr5_2:30316290-30316309 | Msa0767310:intron | 10.0% |
| !! | TAATCAAAAGAATTAAGAAA+CGG | - | chr5_2:30312081-30312100 | None:intergenic | 15.0% |
| !! | ATAAAGTTATAGAGTTAATT+TGG | - | chr5_2:30312498-30312517 | None:intergenic | 15.0% |
| !!! | ATAACTTTATAGCTTTTTAT+TGG | + | chr5_2:30312508-30312527 | Msa0767310:intron | 15.0% |
| !!! | TGTATTTTTAAAAAACAAAC+TGG | + | chr5_2:30312813-30312832 | Msa0767310:intron | 15.0% |
| !!! | CTGCAAAATTTTAAATAATT+TGG | - | chr5_2:30314169-30314188 | None:intergenic | 15.0% |
| !!! | TTATTTAAAATTTTGCAGAT+TGG | + | chr5_2:30314171-30314190 | Msa0767310:intron | 15.0% |
| !!! | CATTTTTATTTTGCATTTAT+AGG | - | chr5_2:30314371-30314390 | None:intergenic | 15.0% |
| !!! | AAAATGAACAAATTTTTTGT+AGG | + | chr5_2:30314385-30314404 | Msa0767310:intron | 15.0% |
| !!! | AAATGAACAAATTTTTTGTA+GGG | + | chr5_2:30314386-30314405 | Msa0767310:intron | 15.0% |
| !! | AAAATCAATAGTAAAATTAC+GGG | - | chr5_2:30314460-30314479 | None:intergenic | 15.0% |
| !! | AGAGTTATTATTTATTAAAG+TGG | - | chr5_2:30315120-30315139 | None:intergenic | 15.0% |
| !!! | CTTATTATATTCTAACATTT+TGG | + | chr5_2:30315140-30315159 | Msa0767310:intron | 15.0% |
| !! | ATAAATTTATGAGAAGAATT+TGG | + | chr5_2:30315443-30315462 | Msa0767310:three_prime_UTR | 15.0% |
| !!! | TGAAAAATGTTTCTAAATAT+TGG | - | chr5_2:30315474-30315493 | None:intergenic | 15.0% |
| !!! | TGAAGGATAATATTTTTTTT+GGG | - | chr5_2:30315773-30315792 | None:intergenic | 15.0% |
| !!! | TTGAAGGATAATATTTTTTT+TGG | - | chr5_2:30315774-30315793 | None:intergenic | 15.0% |
| !!! | AATATTATCCTTCAATTTTT+CGG | + | chr5_2:30315779-30315798 | Msa0767310:intron | 15.0% |
| !! | ATAGTCATAAACAAATTAAA+TGG | + | chr5_2:30315997-30316016 | Msa0767310:intron | 15.0% |
| !!! | CTTTTCAAATGTAAATAAAT+AGG | - | chr5_2:30316045-30316064 | None:intergenic | 15.0% |
| !! | GAAAACAAACATTAAATTTA+AGG | - | chr5_2:30316335-30316354 | None:intergenic | 15.0% |
| !!! | AAAAAAATCTTCTTTAAAGT+TGG | + | chr5_2:30316358-30316377 | Msa0767310:intron | 15.0% |
| !! | TATCTTAATTAAGTACGTAT+AGG | - | chr5_2:30311961-30311980 | None:intergenic | 20.0% |
| !!! | TATTTTAATGTTCCTCATTT+GGG | - | chr5_2:30312291-30312310 | None:intergenic | 20.0% |
| !!! | TTATTTTAATGTTCCTCATT+TGG | - | chr5_2:30312292-30312311 | None:intergenic | 20.0% |
| !! | ATTAAAAGATGATAATACAC+AGG | - | chr5_2:30312671-30312690 | None:intergenic | 20.0% |
| !! | ATAAATATATAACTGAGCAT+AGG | - | chr5_2:30313869-30313888 | None:intergenic | 20.0% |
| !!! | GTTTTAAGAATTTGATACAT+AGG | - | chr5_2:30313894-30313913 | None:intergenic | 20.0% |
| !! | TGTATCAAATTCTTAAAACT+TGG | + | chr5_2:30313895-30313914 | Msa0767310:intron | 20.0% |
| !!! | TTTGCTCATAAGTTTTTTTT+CGG | + | chr5_2:30314112-30314131 | Msa0767310:intron | 20.0% |
| !!! | AATTAACCTTTTAGTAGTTT+TGG | - | chr5_2:30314286-30314305 | None:intergenic | 20.0% |
| !!! | ACTACTAAAAGGTTAATTTT+AGG | + | chr5_2:30314288-30314307 | Msa0767310:intron | 20.0% |
| !!! | CTACTAAAAGGTTAATTTTA+GGG | + | chr5_2:30314289-30314308 | Msa0767310:intron | 20.0% |
| !!! | TTTTTTATAATCGAAGAGAA+AGG | + | chr5_2:30314893-30314912 | Msa0767310:intron | 20.0% |
| !!! | ATATTGTTTTCACTACATTT+TGG | - | chr5_2:30315643-30315662 | None:intergenic | 20.0% |
| !! | AAAATGTAGTGAAAACAATA+TGG | + | chr5_2:30315642-30315661 | Msa0767310:three_prime_UTR | 20.0% |
| !! | TAGCTCAATGTTTATTATTT+GGG | - | chr5_2:30315826-30315845 | None:intergenic | 20.0% |
| !! | ATTGATAGATTTATTTGTGT+TGG | + | chr5_2:30315907-30315926 | Msa0767310:intron | 20.0% |
| !! | AAGCAATTATTGATGAAATT+GGG | + | chr5_2:30316088-30316107 | Msa0767310:intron | 20.0% |
| !! | GACTAAAATTAACAAATCTT+AGG | - | chr5_2:30316167-30316186 | None:intergenic | 20.0% |
| !! | TAATCTCTAACAAAAAAGTA+AGG | - | chr5_2:30316189-30316208 | None:intergenic | 20.0% |
| ! | AAATAAGCTGAAGAAATTTG+AGG | - | chr5_2:30311663-30311682 | None:intergenic | 25.0% |
| ! | GTGAAATTGAAATCTCTAAT+GGG | + | chr5_2:30311847-30311866 | Msa0767310:CDS | 25.0% |
| ! | TTTCTCATGATCACATAAAA+AGG | - | chr5_2:30312205-30312224 | None:intergenic | 25.0% |
| ! | AATTATGAAGTTAATCATCG+AGG | - | chr5_2:30312472-30312491 | None:intergenic | 25.0% |
| ! | CGATGATTAACTTCATAATT+AGG | + | chr5_2:30312472-30312491 | Msa0767310:intron | 25.0% |
| !! | TCTTTTACACATACCATAAA+AGG | + | chr5_2:30313117-30313136 | Msa0767310:CDS | 25.0% |
| !!! | GAAGTGTTTAATACCTTTTA+TGG | - | chr5_2:30313133-30313152 | None:intergenic | 25.0% |
| ! | TCTTAGGATAAACTAGTTAT+TGG | + | chr5_2:30313245-30313264 | Msa0767310:intron | 25.0% |
| ! | ATTAAAACTATATATCGGTC+CGG | + | chr5_2:30313311-30313330 | Msa0767310:intron | 25.0% |
| ! | GGAAATAATATGATTGTGTT+TGG | - | chr5_2:30313398-30313417 | None:intergenic | 25.0% |
| ! | TGAAAATGGTAATAAAGGAA+GGG | - | chr5_2:30313420-30313439 | None:intergenic | 25.0% |
| !! | TCTATATTCTAAGAAAGCAA+TGG | + | chr5_2:30314064-30314083 | Msa0767310:CDS | 25.0% |
| !! | TAAAATTTTGCAGATTGGAA+TGG | + | chr5_2:30314176-30314195 | Msa0767310:intron | 25.0% |
| !! | AAAGCACTCATTTGTTAATA+AGG | - | chr5_2:30314330-30314349 | None:intergenic | 25.0% |
| ! | ATTTATAGGTACTAAACGTA+GGG | - | chr5_2:30314357-30314376 | None:intergenic | 25.0% |
| ! | TGAAAATCATGAATTATGCA+AGG | + | chr5_2:30314417-30314436 | Msa0767310:intron | 25.0% |
| !! | ATTGTATTTTCAACCTAGTT+GGG | - | chr5_2:30314946-30314965 | None:intergenic | 25.0% |
| ! | AAATCGGAAACGATATAAAA+TGG | + | chr5_2:30315085-30315104 | Msa0767310:intron | 25.0% |
| !!! | AACATTTTGGTAACATTTGT+AGG | + | chr5_2:30315153-30315172 | Msa0767310:intron | 25.0% |
| !! | CAATATTCTTTAGTTTCTCT+AGG | + | chr5_2:30315668-30315687 | Msa0767310:three_prime_UTR | 25.0% |
| ! | AATACATACCGAAAAATTGA+AGG | - | chr5_2:30315790-30315809 | None:intergenic | 25.0% |
| !!! | TTTCGGTATGTATTTTTATC+CGG | + | chr5_2:30315796-30315815 | Msa0767310:intron | 25.0% |
| ! | AGCTCAATGTTTATTATTTG+GGG | - | chr5_2:30315825-30315844 | None:intergenic | 25.0% |
| ! | GTAGCTCAATGTTTATTATT+TGG | - | chr5_2:30315827-30315846 | None:intergenic | 25.0% |
| ! | CAAGCAATTATTGATGAAAT+TGG | + | chr5_2:30316087-30316106 | Msa0767310:intron | 25.0% |
| TTTGAACTGATATGAGAACT+GGG | - | chr5_2:30311638-30311657 | None:intergenic | 30.0% | |
| ! | TAACTGGTTGAAACTCTTTT+AGG | - | chr5_2:30311690-30311709 | None:intergenic | 30.0% |
| AAAAGAGTTTCAACCAGTTA+TGG | + | chr5_2:30311690-30311709 | Msa0767310:CDS | 30.0% | |
| ATACTTCAACAATCCATAAC+TGG | - | chr5_2:30311706-30311725 | None:intergenic | 30.0% | |
| GTATAGAACACTTCAATATG+AGG | + | chr5_2:30311722-30311741 | Msa0767310:CDS | 30.0% | |
| GGTGAAATTGAAATCTCTAA+TGG | + | chr5_2:30311846-30311865 | Msa0767310:CDS | 30.0% | |
| TCTCAAATTATCAACAGTGT+CGG | - | chr5_2:30312025-30312044 | None:intergenic | 30.0% | |
| GATTATTGATGTCCAATTAC+AGG | + | chr5_2:30312096-30312115 | Msa0767310:intron | 30.0% | |
| ! | CTGGTTTCTTTTTCTTTATG+TGG | + | chr5_2:30312168-30312187 | Msa0767310:CDS | 30.0% |
| ATGAGAAAATCTTCGAGATA+AGG | + | chr5_2:30312217-30312236 | Msa0767310:intron | 30.0% | |
| AGGAAAACATACTATGGATA+TGG | - | chr5_2:30312452-30312471 | None:intergenic | 30.0% | |
| ATTAGCATAATGTAAAGCGA+AGG | - | chr5_2:30312536-30312555 | None:intergenic | 30.0% | |
| ! | TTTATTCATTGGCTAACAAG+AGG | - | chr5_2:30313010-30313029 | None:intergenic | 30.0% |
| AACAAGAGCTCTTTATTCAT+TGG | - | chr5_2:30313021-30313040 | None:intergenic | 30.0% | |
| ! | GCAATGAGACTTTTCTAAAT+TGG | + | chr5_2:30313278-30313297 | Msa0767310:intron | 30.0% |
| GAAAATGGTAATAAAGGAAG+GGG | - | chr5_2:30313419-30313438 | None:intergenic | 30.0% | |
| GTGAAAATGGTAATAAAGGA+AGG | - | chr5_2:30313421-30313440 | None:intergenic | 30.0% | |
| GACAGTGAAAATGGTAATAA+AGG | - | chr5_2:30313425-30313444 | None:intergenic | 30.0% | |
| TTCTCAAATACTCATATGTG+TGG | - | chr5_2:30313500-30313519 | None:intergenic | 30.0% | |
| AAAAGCTTACCTAAAACAAC+AGG | - | chr5_2:30313759-30313778 | None:intergenic | 30.0% | |
| ! | TGTCCTTTCTTATTTCTTTC+TGG | + | chr5_2:30313778-30313797 | Msa0767310:intron | 30.0% |
| CAACCAGAAAGAAATAAGAA+AGG | - | chr5_2:30313784-30313803 | None:intergenic | 30.0% | |
| CTAATATGAGTTTGACTCTT+AGG | + | chr5_2:30313951-30313970 | Msa0767310:intron | 30.0% | |
| TATGAGCAAAAGTAACAATG+TGG | - | chr5_2:30314102-30314121 | None:intergenic | 30.0% | |
| ATGAACTTACAAGAATTGCT+GGG | - | chr5_2:30314257-30314276 | None:intergenic | 30.0% | |
| AATGAACTTACAAGAATTGC+TGG | - | chr5_2:30314258-30314277 | None:intergenic | 30.0% | |
| TTGCTACCAAAACTACTAAA+AGG | + | chr5_2:30314277-30314296 | Msa0767310:intron | 30.0% | |
| CATTTATAGGTACTAAACGT+AGG | - | chr5_2:30314358-30314377 | None:intergenic | 30.0% | |
| AAATCCAAATTCCATCAGTT+GGG | - | chr5_2:30314533-30314552 | None:intergenic | 30.0% | |
| TAAATCCAAATTCCATCAGT+TGG | - | chr5_2:30314534-30314553 | None:intergenic | 30.0% | |
| ! | GTTTTACCATCTTTACAATC+AGG | + | chr5_2:30314615-30314634 | Msa0767310:CDS | 30.0% |
| ! | TTGAAGAGAGTTTTTGTCAT+TGG | + | chr5_2:30314818-30314837 | Msa0767310:CDS | 30.0% |
| AAGAGAAAGGTTAAGTATCA+GGG | + | chr5_2:30314906-30314925 | Msa0767310:intron | 30.0% | |
| ! | GATTGTATTTTCAACCTAGT+TGG | - | chr5_2:30314947-30314966 | None:intergenic | 30.0% |
| TCCTATTCTATATGTTCATG+AGG | + | chr5_2:30315011-30315030 | Msa0767310:intron | 30.0% | |
| ACCTCATGAACATATAGAAT+AGG | - | chr5_2:30315015-30315034 | None:intergenic | 30.0% | |
| TGCTTTAATCACTGAATAGA+TGG | - | chr5_2:30315235-30315254 | None:intergenic | 30.0% | |
| ATCAAGATAACAAGAGACAT+AGG | - | chr5_2:30315325-30315344 | None:intergenic | 30.0% | |
| CTTTCCTTTATCAGCAATAT+TGG | + | chr5_2:30315409-30315428 | Msa0767310:three_prime_UTR | 30.0% | |
| TGATCCAATATTGCTGATAA+AGG | - | chr5_2:30315416-30315435 | None:intergenic | 30.0% | |
| !! | TTATGTTATTTCACTACCTG+TGG | + | chr5_2:30315556-30315575 | Msa0767310:three_prime_UTR | 30.0% |
| !!! | TACCTGTGGATTTTAGTTTA+TGG | + | chr5_2:30315570-30315589 | Msa0767310:three_prime_UTR | 30.0% |
| TACCATAAACTAAAATCCAC+AGG | - | chr5_2:30315575-30315594 | None:intergenic | 30.0% | |
| ! | TTTGCAACTCAACTTGTTTA+GGG | - | chr5_2:30315849-30315868 | None:intergenic | 30.0% |
| !! | TTTTGCAACTCAACTTGTTT+AGG | - | chr5_2:30315850-30315869 | None:intergenic | 30.0% |
| !! | TTGTGTTGGTTTAATACTTC+CGG | + | chr5_2:30315921-30315940 | Msa0767310:intron | 30.0% |
| ! | TCTATTGTTGTTATTGAGAC+CGG | - | chr5_2:30315943-30315962 | None:intergenic | 30.0% |
| AATCGCTATTTAGAAACGTT+GGG | - | chr5_2:30316132-30316151 | None:intergenic | 30.0% | |
| AAATCGCTATTTAGAAACGT+TGG | - | chr5_2:30316133-30316152 | None:intergenic | 30.0% | |
| TAATTTCAACCATTAGATGC+AGG | - | chr5_2:30316418-30316437 | None:intergenic | 30.0% | |
| CTTTGAACTGATATGAGAAC+TGG | - | chr5_2:30311639-30311658 | None:intergenic | 35.0% | |
| AACACTTCAATATGAGGCTA+AGG | + | chr5_2:30311728-30311747 | Msa0767310:CDS | 35.0% | |
| CTGTATTCGTGCTTTATAGT+TGG | - | chr5_2:30311989-30312008 | None:intergenic | 35.0% | |
| TTTCTCACCAAAACTCTTTG+AGG | - | chr5_2:30312132-30312151 | None:intergenic | 35.0% | |
| !! | AAATTTCCTGCATTGGTTAC+TGG | + | chr5_2:30312149-30312168 | Msa0767310:CDS | 35.0% |
| AAGTAGAGCGAAAAGAGAAT+CGG | + | chr5_2:30312262-30312281 | Msa0767310:intron | 35.0% | |
| AAATTGTCCTACTTCTATGC+AGG | + | chr5_2:30312372-30312391 | Msa0767310:intron | 35.0% | |
| TCATCGAGGAAAACATACTA+TGG | - | chr5_2:30312458-30312477 | None:intergenic | 35.0% | |
| !! | TGGTATATTGCCTTTTTAGC+TGG | + | chr5_2:30312608-30312627 | Msa0767310:CDS | 35.0% |
| !!! | GGTATATTGCCTTTTTAGCT+GGG | + | chr5_2:30312609-30312628 | Msa0767310:CDS | 35.0% |
| !!! | GTATATTGCCTTTTTAGCTG+GGG | + | chr5_2:30312610-30312629 | Msa0767310:CDS | 35.0% |
| GATCGAACAATTGAGACTTT+CGG | + | chr5_2:30312715-30312734 | Msa0767310:intron | 35.0% | |
| ACAATTGAGACTTTCGGATA+AGG | + | chr5_2:30312721-30312740 | Msa0767310:intron | 35.0% | |
| ! | TGTTCGATTCGTGATTCAAT+CGG | + | chr5_2:30312902-30312921 | Msa0767310:intron | 35.0% |
| AACAGCAGCAAATGATACAT+TGG | - | chr5_2:30313091-30313110 | None:intergenic | 35.0% | |
| ! | GAGACTTTTCTAAATTGGCT+AGG | + | chr5_2:30313283-30313302 | Msa0767310:intron | 35.0% |
| CATATCGTAGACAGTGAAAA+TGG | - | chr5_2:30313434-30313453 | None:intergenic | 35.0% | |
| TCATATGTGTGGAACTTCTT+TGG | - | chr5_2:30313489-30313508 | None:intergenic | 35.0% | |
| ! | ATTTTCTCTCTTTGTAGCTC+TGG | + | chr5_2:30313656-30313675 | Msa0767310:intron | 35.0% |
| !! | GAAGCTGAAGCATTGAAAAA+TGG | - | chr5_2:30313684-30313703 | None:intergenic | 35.0% |
| !!! | TCTTTGACTCCTGTTGTTTT+AGG | + | chr5_2:30313747-30313766 | Msa0767310:CDS | 35.0% |
| TTGACTCTTAGGTGTATCAA+TGG | + | chr5_2:30313962-30313981 | Msa0767310:intron | 35.0% | |
| TGACTGAACTGTCTTTCAAT+TGG | + | chr5_2:30313991-30314010 | Msa0767310:CDS | 35.0% | |
| TGAACTTACAAGAATTGCTG+GGG | - | chr5_2:30314256-30314275 | None:intergenic | 35.0% | |
| TTGGATGCTTCTTAGATTGA+AGG | + | chr5_2:30314505-30314524 | Msa0767310:intron | 35.0% | |
| AATCCAAATTCCATCAGTTG+GGG | - | chr5_2:30314532-30314551 | None:intergenic | 35.0% | |
| AGAAATGCTATTGCCAAAGT+AGG | + | chr5_2:30314553-30314572 | Msa0767310:CDS | 35.0% | |
| AAACTTTGTCAGTCCTACTT+TGG | - | chr5_2:30314569-30314588 | None:intergenic | 35.0% | |
| ! | AGTTTCTGTCTGATCTTTTC+TGG | + | chr5_2:30314584-30314603 | Msa0767310:CDS | 35.0% |
| AGGATACCTGATTGTAAAGA+TGG | - | chr5_2:30314624-30314643 | None:intergenic | 35.0% | |
| CAACACTTGACTAAAACACA+AGG | - | chr5_2:30314644-30314663 | None:intergenic | 35.0% | |
| TGTCATTGGATTCTCTATAG+TGG | + | chr5_2:30314832-30314851 | Msa0767310:CDS | 35.0% | |
| GAAGAGAAAGGTTAAGTATC+AGG | + | chr5_2:30314905-30314924 | Msa0767310:intron | 35.0% | |
| ! | ATGTTCATGAGGTGTTTGTT+CGG | + | chr5_2:30315022-30315041 | Msa0767310:intron | 35.0% |
| TCAAGAGACAGAGTTCAAAT+CGG | + | chr5_2:30315069-30315088 | Msa0767310:intron | 35.0% | |
| AACAAGATATCCACACAAAC+TGG | + | chr5_2:30315177-30315196 | Msa0767310:CDS | 35.0% | |
| CAAACATCGAAGAGCAAAAA+CGG | + | chr5_2:30315253-30315272 | Msa0767310:CDS | 35.0% | |
| AAACATCGAAGAGCAAAAAC+GGG | + | chr5_2:30315254-30315273 | Msa0767310:CDS | 35.0% | |
| TCAGCAATATTGGATCAAGT+TGG | + | chr5_2:30315419-30315438 | Msa0767310:three_prime_UTR | 35.0% | |
| ! | TGTTTATTATTTGGGGTAGC+CGG | - | chr5_2:30315818-30315837 | None:intergenic | 35.0% |
| CTCACAGAAAATTTATGCAG+GGG | - | chr5_2:30316384-30316403 | None:intergenic | 35.0% | |
| GCTCACAGAAAATTTATGCA+GGG | - | chr5_2:30316385-30316404 | None:intergenic | 35.0% | |
| AGCTCACAGAAAATTTATGC+AGG | - | chr5_2:30316386-30316405 | None:intergenic | 35.0% | |
| AACTGATATGAGAACTGGGT+TGG | - | chr5_2:30311634-30311653 | None:intergenic | 40.0% | |
| AAAGCACGAATACAGACACA+CGG | + | chr5_2:30311994-30312013 | Msa0767310:intron | 40.0% | |
| ! | GTCCAATCCTCAAAGAGTTT+TGG | + | chr5_2:30312122-30312141 | Msa0767310:CDS | 40.0% |
| ! | CACCAAAACTCTTTGAGGAT+TGG | - | chr5_2:30312127-30312146 | None:intergenic | 40.0% |
| TGGTGAGAAATTTCCTGCAT+TGG | + | chr5_2:30312142-30312161 | Msa0767310:CDS | 40.0% | |
| AAGAAACCAGTAACCAATGC+AGG | - | chr5_2:30312158-30312177 | None:intergenic | 40.0% | |
| !! | AGAAGTACCTGCATAGAAGT+AGG | - | chr5_2:30312382-30312401 | None:intergenic | 40.0% |
| TTCTGTTGTACATCTCCTAG+TGG | + | chr5_2:30312582-30312601 | Msa0767310:CDS | 40.0% | |
| TCTGTTGTACATCTCCTAGT+GGG | + | chr5_2:30312583-30312602 | Msa0767310:CDS | 40.0% | |
| CAATTGTTCGATCTCTGGTA+CGG | - | chr5_2:30312708-30312727 | None:intergenic | 40.0% | |
| AGTCTCAATTGTTCGATCTC+TGG | - | chr5_2:30312713-30312732 | None:intergenic | 40.0% | |
| ACTTTCGGATAAGGTTCAAC+AGG | + | chr5_2:30312730-30312749 | Msa0767310:intron | 40.0% | |
| TTAACTGTGATTCAACTGCC+TGG | - | chr5_2:30312757-30312776 | None:intergenic | 40.0% | |
| TCAGAGTTGAGACTTAGAAC+CGG | - | chr5_2:30312954-30312973 | None:intergenic | 40.0% | |
| ! | GTTCTAAGTCTCAACTCTGA+AGG | + | chr5_2:30312954-30312973 | Msa0767310:intron | 40.0% |
| !! | CTTGTTACTATTGACTCCAG+TGG | + | chr5_2:30313035-30313054 | Msa0767310:CDS | 40.0% |
| ATTGGACATGACATGACCAA+GGG | - | chr5_2:30313073-30313092 | None:intergenic | 40.0% | |
| ! | CACATTTTCCCCTCTCTATA+TGG | + | chr5_2:30313209-30313228 | Msa0767310:intron | 40.0% |
| CAATGCAACCATATAGAGAG+GGG | - | chr5_2:30313220-30313239 | None:intergenic | 40.0% | |
| GCAATGCAACCATATAGAGA+GGG | - | chr5_2:30313221-30313240 | None:intergenic | 40.0% | |
| AGCAATGCAACCATATAGAG+AGG | - | chr5_2:30313222-30313241 | None:intergenic | 40.0% | |
| ! | ATGTTGGCCTAAGACAAACT+GGG | - | chr5_2:30313706-30313725 | None:intergenic | 40.0% |
| ! | TATGTTGGCCTAAGACAAAC+TGG | - | chr5_2:30313707-30313726 | None:intergenic | 40.0% |
| ACAGAGACAGTGGAATATGT+TGG | - | chr5_2:30313722-30313741 | None:intergenic | 40.0% | |
| AACATATTCCACTGTCTCTG+TGG | + | chr5_2:30313721-30313740 | Msa0767310:CDS | 40.0% | |
| GAACTGTCTTTCAATTGGAC+TGG | + | chr5_2:30313996-30314015 | Msa0767310:CDS | 40.0% | |
| AACTTACAAGAATTGCTGGG+GGG | - | chr5_2:30314254-30314273 | None:intergenic | 40.0% | |
| GAACTTACAAGAATTGCTGG+GGG | - | chr5_2:30314255-30314274 | None:intergenic | 40.0% | |
| !! | GTTTGCGACTGATTTCGTTT+TGG | + | chr5_2:30314486-30314505 | Msa0767310:intron | 40.0% |
| ! | CTGTCTGATCTTTTCTGGAT+TGG | + | chr5_2:30314589-30314608 | Msa0767310:CDS | 40.0% |
| !! | GCAGCTTGCTACTAATACTT+TGG | + | chr5_2:30314757-30314776 | Msa0767310:intron | 40.0% |
| TTTCCAACTGCATGTGTTAG+TGG | - | chr5_2:30314794-30314813 | None:intergenic | 40.0% | |
| GGATTCTCTATAGTGGTGTT+TGG | + | chr5_2:30314839-30314858 | Msa0767310:CDS | 40.0% | |
| TCAACCTAGTTGGGATGTTT+CGG | - | chr5_2:30314937-30314956 | None:intergenic | 40.0% | |
| ATATCCACACAAACTGGCAT+TGG | + | chr5_2:30315183-30315202 | Msa0767310:CDS | 40.0% | |
| TGAGGCTAAGGATTCAAGCT+TGG | + | chr5_2:30311740-30311759 | Msa0767310:CDS | 45.0% | |
| !! | AAGCTTGGTGTTCTCTCCAT+TGG | + | chr5_2:30311755-30311774 | Msa0767310:CDS | 45.0% |
| CGTTGGGAGTAAGACAAAGA+AGG | + | chr5_2:30311784-30311803 | Msa0767310:CDS | 45.0% | |
| ATCATCAGCATCTGCTGCTA+AGG | - | chr5_2:30311826-30311845 | None:intergenic | 45.0% | |
| TTAGCAGCAGATGCTGATGA+TGG | + | chr5_2:30311825-30311844 | Msa0767310:CDS | 45.0% | |
| GGATTGGACAGACCTGTAAT+TGG | - | chr5_2:30312111-30312130 | None:intergenic | 45.0% | |
| GAGAATCGGAATCCCAAATG+AGG | + | chr5_2:30312276-30312295 | Msa0767310:intron | 45.0% | |
| CTGTTGTACATCTCCTAGTG+GGG | + | chr5_2:30312584-30312603 | Msa0767310:CDS | 45.0% | |
| TGTTGTACATCTCCTAGTGG+GGG | + | chr5_2:30312585-30312604 | Msa0767310:CDS | 45.0% | |
| !!! | TGCCTTTTTAGCTGGGGTTT+AGG | + | chr5_2:30312616-30312635 | Msa0767310:CDS | 45.0% |
| GTATAACTCACTGCACGCTT+TGG | - | chr5_2:30312646-30312665 | None:intergenic | 45.0% | |
| CTTAGAACCAGATCGAACTG+CGG | - | chr5_2:30312844-30312863 | None:intergenic | 45.0% | |
| !! | GCAGTTCGATCTGGTTCTAA+GGG | + | chr5_2:30312843-30312862 | Msa0767310:intron | 45.0% |
| CATTGGACATGACATGACCA+AGG | - | chr5_2:30313074-30313093 | None:intergenic | 45.0% | |
| TGGTTGCATTGCTCAGTCTT+AGG | + | chr5_2:30313229-30313248 | Msa0767310:intron | 45.0% | |
| ATCGGTCCGGTTGAAATAGA+AGG | + | chr5_2:30313324-30313343 | Msa0767310:intron | 45.0% | |
| TCGGTCCGGTTGAAATAGAA+GGG | + | chr5_2:30313325-30313344 | Msa0767310:intron | 45.0% | |
| TCCGGTTGAAATAGAAGGGA+CGG | + | chr5_2:30313329-30313348 | Msa0767310:intron | 45.0% | |
| TCCGTCCCTTCTATTTCAAC+CGG | - | chr5_2:30313333-30313352 | None:intergenic | 45.0% | |
| ! | ATAGAAGGGACGGATTTAGC+AGG | + | chr5_2:30313339-30313358 | Msa0767310:intron | 45.0% |
| ! | TAGAAGGGACGGATTTAGCA+GGG | + | chr5_2:30313340-30313359 | Msa0767310:intron | 45.0% |
| ! | AGCAGGGTTTAGAGTGAATG+AGG | + | chr5_2:30313356-30313375 | Msa0767310:intron | 45.0% |
| TCAGCTTCCCAGTTTGTCTT+AGG | + | chr5_2:30313696-30313715 | Msa0767310:CDS | 45.0% | |
| AAAGATAGCCACAGAGACAG+TGG | - | chr5_2:30313732-30313751 | None:intergenic | 45.0% | |
| AATTGCTGGGGGGATACAAA+AGG | - | chr5_2:30314244-30314263 | None:intergenic | 45.0% | |
| GAATCCGAAACATCCCAACT+AGG | + | chr5_2:30314930-30314949 | Msa0767310:intron | 45.0% | |
| AGTACCAATGCCAGTTTGTG+TGG | - | chr5_2:30315190-30315209 | None:intergenic | 45.0% | |
| GGTACTGCTATTGCAATTGC+TGG | + | chr5_2:30315204-30315223 | Msa0767310:CDS | 45.0% | |
| CTGCAGCCCTTACATCTTAA+CGG | + | chr5_2:30315381-30315400 | Msa0767310:CDS | 45.0% | |
| GAGCGTCCGTTAAGATGTAA+GGG | - | chr5_2:30315390-30315409 | None:intergenic | 45.0% | |
| ! | AGAGCGTCCGTTAAGATGTA+AGG | - | chr5_2:30315391-30315410 | None:intergenic | 45.0% |
| GGTGCTAAGCAACTTATGCT+TGG | - | chr5_2:30315622-30315641 | None:intergenic | 45.0% | |
| GATGCAGGTAAGAGATACAG+AGG | - | chr5_2:30315710-30315729 | None:intergenic | 45.0% | |
| TGTATCTCTTACCTGCATCC+AGG | + | chr5_2:30315711-30315730 | Msa0767310:intron | 45.0% | |
| GTATCTCTTACCTGCATCCA+GGG | + | chr5_2:30315712-30315731 | Msa0767310:intron | 45.0% | |
| CAACCATTAGATGCAGGCAA+CGG | - | chr5_2:30316412-30316431 | None:intergenic | 45.0% | |
| !! | CTAAAAAATTATAAATTTAT+GGG | + | chr5_2:30316291-30316310 | Msa0767310:intron | 5.0% |
| GGTGTTCTCTCCATTGGTGA+AGG | + | chr5_2:30311761-30311780 | Msa0767310:CDS | 50.0% | |
| !! | TCTCCATTGGTGAAGGCGTT+GGG | + | chr5_2:30311768-30311787 | Msa0767310:CDS | 50.0% |
| GGCCTAAACCCCAGCTAAAA+AGG | - | chr5_2:30312621-30312640 | None:intergenic | 50.0% | |
| AACTCACTGCACGCTTTGGT+AGG | - | chr5_2:30312642-30312661 | None:intergenic | 50.0% | |
| GGATAAGGTTCAACAGGTCC+AGG | + | chr5_2:30312736-30312755 | Msa0767310:intron | 50.0% | |
| !! | CGCAGTTCGATCTGGTTCTA+AGG | + | chr5_2:30312842-30312861 | Msa0767310:intron | 50.0% |
| AAGGGACTGAGAACTGACCA+CGG | + | chr5_2:30312861-30312880 | Msa0767310:intron | 50.0% | |
| CTGACCACGGTAAAATCAGC+TGG | + | chr5_2:30312874-30312893 | Msa0767310:intron | 50.0% | |
| !! | TCTGCCAGCTGATTTTACCG+TGG | - | chr5_2:30312881-30312900 | None:intergenic | 50.0% |
| CGATTCGTGATTCAATCGGC+TGG | + | chr5_2:30312906-30312925 | Msa0767310:intron | 50.0% | |
| GTTCCTAATCCTCACTGGTC+CGG | + | chr5_2:30312932-30312951 | Msa0767310:intron | 50.0% | |
| AGGGCATGACAAAATGCCAC+TGG | - | chr5_2:30313054-30313073 | None:intergenic | 50.0% | |
| ! | GTGGCATTTTGTCATGCCCT+TGG | + | chr5_2:30313054-30313073 | Msa0767310:CDS | 50.0% |
| GATTGAAGGACCCCAACTGA+TGG | + | chr5_2:30314519-30314538 | Msa0767310:intron | 50.0% | |
| GGACCCCAACTGATGGAATT+TGG | + | chr5_2:30314526-30314545 | Msa0767310:CDS | 50.0% | |
| ! | GCTGCAGCAGCTTTCTGAAA+TGG | - | chr5_2:30315368-30315387 | None:intergenic | 50.0% |
| GACTACCCCTCCCATATGAA+GGG | - | chr5_2:30315743-30315762 | None:intergenic | 50.0% | |
| AGACTACCCCTCCCATATGA+AGG | - | chr5_2:30315744-30315763 | None:intergenic | 50.0% | |
| TCATATGGGAGGGGTAGTCT+TGG | + | chr5_2:30315744-30315763 | Msa0767310:intron | 50.0% | |
| ! | CTCTCCATTGGTGAAGGCGT+TGG | + | chr5_2:30311767-30311786 | Msa0767310:CDS | 55.0% |
| ACTCCCAACGCCTTCACCAA+TGG | - | chr5_2:30311774-30311793 | None:intergenic | 55.0% | |
| GCTGCTAAGGCTGCAACAAC+TGG | - | chr5_2:30311813-30311832 | None:intergenic | 55.0% | |
| TGTACATCTCCTAGTGGGGG+TGG | + | chr5_2:30312588-30312607 | Msa0767310:CDS | 55.0% | |
| GGCAATATACCACCCCCACT+AGG | - | chr5_2:30312600-30312619 | None:intergenic | 55.0% | |
| GGTTGAACCGCAGTTCGATC+TGG | + | chr5_2:30312834-30312853 | Msa0767310:intron | 55.0% | |
| TCGTGATTCAATCGGCTGGC+TGG | + | chr5_2:30312910-30312929 | Msa0767310:intron | 55.0% | |
| ! | GGCTGGTTCCTAATCCTCAC+TGG | + | chr5_2:30312927-30312946 | Msa0767310:intron | 55.0% |
| GAACCGGACCAGTGAGGATT+AGG | - | chr5_2:30312938-30312957 | None:intergenic | 55.0% | |
| GACTTAGAACCGGACCAGTG+AGG | - | chr5_2:30312944-30312963 | None:intergenic | 55.0% | |
| GCGCCACTAACACATGCAGT+TGG | + | chr5_2:30314788-30314807 | Msa0767310:CDS | 55.0% | |
| CAGGGCGTAGCCCTTCATAT+GGG | + | chr5_2:30315730-30315749 | Msa0767310:intron | 55.0% | |
| GCGTAGCCCTTCATATGGGA+GGG | + | chr5_2:30315734-30315753 | Msa0767310:intron | 55.0% | |
| CGTAGCCCTTCATATGGGAG+GGG | + | chr5_2:30315735-30315754 | Msa0767310:intron | 55.0% | |
| TCGCCGTTGCCTGCATCTAA+TGG | + | chr5_2:30316406-30316425 | Msa0767310:intron | 55.0% | |
| CCATATGAAGGGCTACGCCC+TGG | - | chr5_2:30315732-30315751 | None:intergenic | 60.0% | |
| CCAGGGCGTAGCCCTTCATA+TGG | + | chr5_2:30315729-30315748 | Msa0767310:intron | 60.0% | |
| GGCGTAGCCCTTCATATGGG+AGG | + | chr5_2:30315733-30315752 | Msa0767310:intron | 60.0% | |
| AAGGGCTACGCCCTGGATGC+AGG | - | chr5_2:30315725-30315744 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 30311618 | 30316438 | 30311618 | ID=Msa0767310;Name=Msa0767310 |
| chr5_2 | mRNA | 30311618 | 30316438 | 30311618 | ID=Msa0767310-mRNA-1;Parent=Msa0767310;Name=Msa0767310-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0.63|0.58|1|0.90|0.83|12|345|384 |
| chr5_2 | exon | 30311618 | 30311868 | 30311618 | ID=Msa0767310-mRNA-1:exon:11406;Parent=Msa0767310-mRNA-1 |
| chr5_2 | exon | 30312118 | 30312189 | 30312118 | ID=Msa0767310-mRNA-1:exon:11407;Parent=Msa0767310-mRNA-1 |
| chr5_2 | exon | 30312576 | 30312654 | 30312576 | ID=Msa0767310-mRNA-1:exon:11408;Parent=Msa0767310-mRNA-1 |
| chr5_2 | exon | 30313018 | 30313138 | 30313018 | ID=Msa0767310-mRNA-1:exon:11409;Parent=Msa0767310-mRNA-1 |
| chr5_2 | exon | 30313673 | 30313768 | 30313673 | ID=Msa0767310-mRNA-1:exon:11410;Parent=Msa0767310-mRNA-1 |
| chr5_2 | exon | 30313973 | 30314085 | 30313973 | ID=Msa0767310-mRNA-1:exon:11411;Parent=Msa0767310-mRNA-1 |
| chr5_2 | exon | 30314189 | 30314266 | 30314189 | ID=Msa0767310-mRNA-1:exon:11412;Parent=Msa0767310-mRNA-1 |
| chr5_2 | exon | 30314520 | 30314636 | 30314520 | ID=Msa0767310-mRNA-1:exon:11413;Parent=Msa0767310-mRNA-1 |
| chr5_2 | exon | 30314761 | 30314860 | 30314761 | ID=Msa0767310-mRNA-1:exon:11414;Parent=Msa0767310-mRNA-1 |
| chr5_2 | exon | 30315175 | 30315275 | 30315175 | ID=Msa0767310-mRNA-1:exon:11415;Parent=Msa0767310-mRNA-1 |
| chr5_2 | exon | 30315374 | 30315728 | 30315374 | ID=Msa0767310-mRNA-1:exon:11416;Parent=Msa0767310-mRNA-1 |
| chr5_2 | exon | 30316422 | 30316438 | 30316422 | ID=Msa0767310-mRNA-1:exon:11417;Parent=Msa0767310-mRNA-1 |
| chr5_2 | CDS | 30311618 | 30311868 | 30311618 | ID=Msa0767310-mRNA-1:cds;Parent=Msa0767310-mRNA-1 |
| chr5_2 | CDS | 30312118 | 30312189 | 30312118 | ID=Msa0767310-mRNA-1:cds;Parent=Msa0767310-mRNA-1 |
| chr5_2 | CDS | 30312576 | 30312654 | 30312576 | ID=Msa0767310-mRNA-1:cds;Parent=Msa0767310-mRNA-1 |
| chr5_2 | CDS | 30313018 | 30313138 | 30313018 | ID=Msa0767310-mRNA-1:cds;Parent=Msa0767310-mRNA-1 |
| chr5_2 | CDS | 30313673 | 30313768 | 30313673 | ID=Msa0767310-mRNA-1:cds;Parent=Msa0767310-mRNA-1 |
| chr5_2 | CDS | 30313973 | 30314085 | 30313973 | ID=Msa0767310-mRNA-1:cds;Parent=Msa0767310-mRNA-1 |
| chr5_2 | CDS | 30314189 | 30314266 | 30314189 | ID=Msa0767310-mRNA-1:cds;Parent=Msa0767310-mRNA-1 |
| chr5_2 | CDS | 30314520 | 30314636 | 30314520 | ID=Msa0767310-mRNA-1:cds;Parent=Msa0767310-mRNA-1 |
| chr5_2 | CDS | 30314761 | 30314860 | 30314761 | ID=Msa0767310-mRNA-1:cds;Parent=Msa0767310-mRNA-1 |
| chr5_2 | CDS | 30315175 | 30315275 | 30315175 | ID=Msa0767310-mRNA-1:cds;Parent=Msa0767310-mRNA-1 |
| chr5_2 | CDS | 30315374 | 30315400 | 30315374 | ID=Msa0767310-mRNA-1:cds;Parent=Msa0767310-mRNA-1 |
| chr5_2 | three_prime_UTR | 30315401 | 30315728 | 30315401 | ID=Msa0767310-mRNA-1:three_prime_utr;Parent=Msa0767310-mRNA-1 |
| chr5_2 | three_prime_UTR | 30316422 | 30316438 | 30316422 | ID=Msa0767310-mRNA-1:three_prime_utr;Parent=Msa0767310-mRNA-1 |
| Gene Sequence |
| Protein sequence |
