Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0846870 | XP_003614055.2 | 90.465 | 409 | 14 | 3 | 1 | 384 | 1 | 409 | 0.0 | 725 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0846870 | sp|P11869|TPT_SPIOL | 71.176 | 340 | 67 | 2 | 60 | 377 | 70 | 400 | 1.46e-170 | 484 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0846870 | G7JWT8 | 90.465 | 409 | 14 | 3 | 1 | 384 | 1 | 409 | 0.0 | 725 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004180 | Msa0846870 | -0.804836 | 1.784194e-49 | -8.615850e-47 |
| Msa0004940 | Msa0846870 | 0.820477 | 6.720895e-53 | -8.615850e-47 |
| Msa0004990 | Msa0846870 | 0.814195 | 1.743384e-51 | -8.615850e-47 |
| Msa0011490 | Msa0846870 | 0.800990 | 1.112230e-48 | -8.615850e-47 |
| Msa0012800 | Msa0846870 | 0.814272 | 1.676343e-51 | -8.615850e-47 |
| Msa0024650 | Msa0846870 | 0.800127 | 1.667124e-48 | -8.615850e-47 |
| Msa0025560 | Msa0846870 | 0.805151 | 1.533307e-49 | -8.615850e-47 |
| Msa0025570 | Msa0846870 | 0.807417 | 5.105791e-50 | -8.615850e-47 |
| Msa0031650 | Msa0846870 | 0.815860 | 7.446087e-52 | -8.615850e-47 |
| Msa0036260 | Msa0846870 | 0.809923 | 1.488401e-50 | -8.615850e-47 |
| Msa0038010 | Msa0846870 | 0.817682 | 2.905622e-52 | -8.615850e-47 |
| Msa0047560 | Msa0846870 | -0.822871 | 1.878500e-53 | -8.615850e-47 |
| Msa0053040 | Msa0846870 | 0.814686 | 1.357789e-51 | -8.615850e-47 |
| Msa0060410 | Msa0846870 | 0.820691 | 5.999768e-53 | -8.615850e-47 |
| Msa0073110 | Msa0846870 | 0.810558 | 1.085700e-50 | -8.615850e-47 |
| Msa0078160 | Msa0846870 | -0.804209 | 2.410564e-49 | -8.615850e-47 |
| Msa0078170 | Msa0846870 | -0.801417 | 9.091496e-49 | -8.615850e-47 |
| Msa0084190 | Msa0846870 | 0.807373 | 5.217374e-50 | -8.615850e-47 |
| Msa0086620 | Msa0846870 | -0.816962 | 4.220295e-52 | -8.615850e-47 |
| Msa0098380 | Msa0846870 | 0.838688 | 2.478015e-57 | -8.615850e-47 |
| Msa0117650 | Msa0846870 | 0.801382 | 9.244840e-49 | -8.615850e-47 |
| Msa0603600 | Msa0846870 | -0.821037 | 4.995473e-53 | -8.615850e-47 |
| Msa0604280 | Msa0846870 | 0.801248 | 9.849029e-49 | -8.615850e-47 |
| Msa0612090 | Msa0846870 | -0.813564 | 2.401648e-51 | -8.615850e-47 |
| Msa0622800 | Msa0846870 | -0.800078 | 1.706084e-48 | -8.615850e-47 |
| Msa0622890 | Msa0846870 | 0.825448 | 4.663259e-54 | -8.615850e-47 |
| Msa0626980 | Msa0846870 | 0.819916 | 9.032256e-53 | -8.615850e-47 |
| Msa0627360 | Msa0846870 | 0.821266 | 4.424061e-53 | -8.615850e-47 |
| Msa0638300 | Msa0846870 | -0.804063 | 2.586039e-49 | -8.615850e-47 |
| Msa0643230 | Msa0846870 | 0.836105 | 1.137296e-56 | -8.615850e-47 |
| Msa0655370 | Msa0846870 | 0.827166 | 1.818254e-54 | -8.615850e-47 |
| Msa0659230 | Msa0846870 | 0.819163 | 1.341472e-52 | -8.615850e-47 |
| Msa0662230 | Msa0846870 | -0.801425 | 9.060566e-49 | -8.615850e-47 |
| Msa0667840 | Msa0846870 | -0.809836 | 1.553966e-50 | -8.615850e-47 |
| Msa0673620 | Msa0846870 | -0.800820 | 1.204776e-48 | -8.615850e-47 |
| Msa0673940 | Msa0846870 | 0.810280 | 1.246998e-50 | -8.615850e-47 |
| Msa0677250 | Msa0846870 | -0.819291 | 1.254708e-52 | -8.615850e-47 |
| Msa0680460 | Msa0846870 | 0.807597 | 4.676133e-50 | -8.615850e-47 |
| Msa0685390 | Msa0846870 | -0.819439 | 1.160791e-52 | -8.615850e-47 |
| Msa0689840 | Msa0846870 | 0.826423 | 2.735507e-54 | -8.615850e-47 |
| Msa0699170 | Msa0846870 | 0.801062 | 1.074938e-48 | -8.615850e-47 |
| Msa0708020 | Msa0846870 | 0.810232 | 1.277106e-50 | -8.615850e-47 |
| Msa0709790 | Msa0846870 | 0.807580 | 4.714761e-50 | -8.615850e-47 |
| Msa0714230 | Msa0846870 | -0.831584 | 1.536710e-55 | -8.615850e-47 |
| Msa0717030 | Msa0846870 | 0.819039 | 1.431557e-52 | -8.615850e-47 |
| Msa0722730 | Msa0846870 | 0.972677 | 3.701300e-135 | -8.615850e-47 |
| Msa0730890 | Msa0846870 | 0.818142 | 2.287575e-52 | -8.615850e-47 |
| Msa0743370 | Msa0846870 | 0.828818 | 7.277349e-55 | -8.615850e-47 |
| Msa0747710 | Msa0846870 | 0.827622 | 1.413267e-54 | -8.615850e-47 |
| Msa0750790 | Msa0846870 | 0.805224 | 1.480120e-49 | -8.615850e-47 |
| Msa0755480 | Msa0846870 | -0.806503 | 7.970151e-50 | -8.615850e-47 |
| Msa0766910 | Msa0846870 | -0.805988 | 1.023282e-49 | -8.615850e-47 |
| Msa0767310 | Msa0846870 | 0.882781 | 7.807017e-71 | -8.615850e-47 |
| Msa0773030 | Msa0846870 | 0.805018 | 1.634182e-49 | -8.615850e-47 |
| Msa0776340 | Msa0846870 | 0.808838 | 2.543560e-50 | -8.615850e-47 |
| Msa0790650 | Msa0846870 | -0.815834 | 7.546826e-52 | -8.615850e-47 |
| Msa0792410 | Msa0846870 | 0.825338 | 4.948855e-54 | -8.615850e-47 |
| Msa0800120 | Msa0846870 | 0.814844 | 1.252467e-51 | -8.615850e-47 |
| Msa0800150 | Msa0846870 | 0.801386 | 9.228281e-49 | -8.615850e-47 |
| Msa0812610 | Msa0846870 | 0.804756 | 1.853786e-49 | -8.615850e-47 |
| Msa0814660 | Msa0846870 | 0.813381 | 2.634321e-51 | -8.615850e-47 |
| Msa0822680 | Msa0846870 | -0.809478 | 1.855478e-50 | -8.615850e-47 |
| Msa0829250 | Msa0846870 | -0.804457 | 2.140281e-49 | -8.615850e-47 |
| Msa0840540 | Msa0846870 | 0.809431 | 1.898443e-50 | -8.615850e-47 |
| Msa0121320 | Msa0846870 | 0.815225 | 1.031069e-51 | -8.615850e-47 |
| Msa0130360 | Msa0846870 | 0.856949 | 2.275327e-62 | -8.615850e-47 |
| Msa0136090 | Msa0846870 | 0.841275 | 5.243597e-58 | -8.615850e-47 |
| Msa0143950 | Msa0846870 | 0.820875 | 5.442892e-53 | -8.615850e-47 |
| Msa0145990 | Msa0846870 | -0.818784 | 1.635877e-52 | -8.615850e-47 |
| Msa0163690 | Msa0846870 | 0.815606 | 8.480051e-52 | -8.615850e-47 |
| Msa0166180 | Msa0846870 | 0.811402 | 7.128005e-51 | -8.615850e-47 |
| Msa0171740 | Msa0846870 | 0.813334 | 2.697304e-51 | -8.615850e-47 |
| Msa0175060 | Msa0846870 | 0.804810 | 1.806381e-49 | -8.615850e-47 |
| Msa0186510 | Msa0846870 | -0.813689 | 2.253876e-51 | -8.615850e-47 |
| Msa0188560 | Msa0846870 | 0.813606 | 2.351232e-51 | -8.615850e-47 |
| Msa0192830 | Msa0846870 | 0.832474 | 9.262181e-56 | -8.615850e-47 |
| Msa0199440 | Msa0846870 | 0.803212 | 3.882810e-49 | -8.615850e-47 |
| Msa0201440 | Msa0846870 | 0.801661 | 8.104653e-49 | -8.615850e-47 |
| Msa0206370 | Msa0846870 | 0.824400 | 8.239801e-54 | -8.615850e-47 |
| Msa0211460 | Msa0846870 | 0.806792 | 6.926700e-50 | -8.615850e-47 |
| Msa0212950 | Msa0846870 | -0.805429 | 1.340776e-49 | -8.615850e-47 |
| Msa0219810 | Msa0846870 | 0.801436 | 9.011124e-49 | -8.615850e-47 |
| Msa0221180 | Msa0846870 | 0.813596 | 2.362695e-51 | -8.615850e-47 |
| Msa0223040 | Msa0846870 | 0.811649 | 6.300958e-51 | -8.615850e-47 |
| Msa0230920 | Msa0846870 | 0.827150 | 1.833683e-54 | -8.615850e-47 |
| Msa0234150 | Msa0846870 | 0.827719 | 1.339037e-54 | -8.615850e-47 |
| Msa0235080 | Msa0846870 | 0.803238 | 3.835739e-49 | -8.615850e-47 |
| Msa0238460 | Msa0846870 | -0.803586 | 3.247749e-49 | -8.615850e-47 |
| Msa0371350 | Msa0846870 | -0.817343 | 3.464676e-52 | -8.615850e-47 |
| Msa0372100 | Msa0846870 | 0.803294 | 3.734070e-49 | -8.615850e-47 |
| Msa0394500 | Msa0846870 | 0.810225 | 1.281203e-50 | -8.615850e-47 |
| Msa0415010 | Msa0846870 | 0.811382 | 7.199585e-51 | -8.615850e-47 |
| Msa0419850 | Msa0846870 | 0.819895 | 9.134656e-53 | -8.615850e-47 |
| Msa0433090 | Msa0846870 | 0.828239 | 1.004113e-54 | -8.615850e-47 |
| Msa0434910 | Msa0846870 | 0.807477 | 4.960097e-50 | -8.615850e-47 |
| Msa0459930 | Msa0846870 | 0.825294 | 5.070334e-54 | -8.615850e-47 |
| Msa0463820 | Msa0846870 | -0.830742 | 2.474407e-55 | -8.615850e-47 |
| Msa0474660 | Msa0846870 | -0.832753 | 7.897188e-56 | -8.615850e-47 |
| Msa0481670 | Msa0846870 | 0.808852 | 2.526233e-50 | -8.615850e-47 |
| Msa0244030 | Msa0846870 | 0.807591 | 4.689824e-50 | -8.615850e-47 |
| Msa0244060 | Msa0846870 | 0.803190 | 3.923850e-49 | -8.615850e-47 |
| Msa0244310 | Msa0846870 | 0.808350 | 3.233189e-50 | -8.615850e-47 |
| Msa0253230 | Msa0846870 | -0.811598 | 6.463026e-51 | -8.615850e-47 |
| Msa0260980 | Msa0846870 | 0.812526 | 4.056616e-51 | -8.615850e-47 |
| Msa0261020 | Msa0846870 | -0.803651 | 3.148717e-49 | -8.615850e-47 |
| Msa0264230 | Msa0846870 | 0.826825 | 2.193173e-54 | -8.615850e-47 |
| Msa0273360 | Msa0846870 | 0.812316 | 4.508792e-51 | -8.615850e-47 |
| Msa0273780 | Msa0846870 | -0.815924 | 7.205839e-52 | -8.615850e-47 |
| Msa0277320 | Msa0846870 | 0.804149 | 2.481266e-49 | -8.615850e-47 |
| Msa0278920 | Msa0846870 | 0.820838 | 5.551502e-53 | -8.615850e-47 |
| Msa0280160 | Msa0846870 | 0.800998 | 1.107616e-48 | -8.615850e-47 |
| Msa0282830 | Msa0846870 | 0.808666 | 2.768983e-50 | -8.615850e-47 |
| Msa0287480 | Msa0846870 | 0.820382 | 7.065498e-53 | -8.615850e-47 |
| Msa0293060 | Msa0846870 | -0.806870 | 6.669157e-50 | -8.615850e-47 |
| Msa0300470 | Msa0846870 | 0.810761 | 9.815139e-51 | -8.615850e-47 |
| Msa0302200 | Msa0846870 | 0.819811 | 9.547995e-53 | -8.615850e-47 |
| Msa0307630 | Msa0846870 | 0.826339 | 2.864585e-54 | -8.615850e-47 |
| Msa0319220 | Msa0846870 | 0.800135 | 1.661298e-48 | -8.615850e-47 |
| Msa0321240 | Msa0846870 | 0.817833 | 2.685699e-52 | -8.615850e-47 |
| Msa0331070 | Msa0846870 | -0.802946 | 4.407552e-49 | -8.615850e-47 |
| Msa0331190 | Msa0846870 | 0.802559 | 5.297803e-49 | -8.615850e-47 |
| Msa0336430 | Msa0846870 | 0.841178 | 5.563361e-58 | -8.615850e-47 |
| Msa0336460 | Msa0846870 | 0.843111 | 1.712478e-58 | -8.615850e-47 |
| Msa0336520 | Msa0846870 | 0.839669 | 1.380148e-57 | -8.615850e-47 |
| Msa0337970 | Msa0846870 | 0.801456 | 8.928961e-49 | -8.615850e-47 |
| Msa0339530 | Msa0846870 | 0.809716 | 1.648951e-50 | -8.615850e-47 |
| Msa0340700 | Msa0846870 | -0.800215 | 1.599937e-48 | -8.615850e-47 |
| Msa0357470 | Msa0846870 | 0.834920 | 2.267090e-56 | -8.615850e-47 |
| Msa0357510 | Msa0846870 | 0.830367 | 3.057159e-55 | -8.615850e-47 |
| Msa0357530 | Msa0846870 | 0.828594 | 8.241229e-55 | -8.615850e-47 |
| Msa0357550 | Msa0846870 | 0.801693 | 7.982056e-49 | -8.615850e-47 |
| Msa0357560 | Msa0846870 | 0.800289 | 1.545209e-48 | -8.615850e-47 |
| Msa0484590 | Msa0846870 | -0.801690 | 7.994334e-49 | -8.615850e-47 |
| Msa0490740 | Msa0846870 | -0.825957 | 3.530055e-54 | -8.615850e-47 |
| Msa0511600 | Msa0846870 | -0.804768 | 1.843888e-49 | -8.615850e-47 |
| Msa0524080 | Msa0846870 | -0.800049 | 1.729221e-48 | -8.615850e-47 |
| Msa0524710 | Msa0846870 | 0.843245 | 1.577260e-58 | -8.615850e-47 |
| Msa0525180 | Msa0846870 | -0.810537 | 1.097161e-50 | -8.615850e-47 |
| Msa0530220 | Msa0846870 | -0.803927 | 2.758921e-49 | -8.615850e-47 |
| Msa0530660 | Msa0846870 | 0.814906 | 1.213472e-51 | -8.615850e-47 |
| Msa0531040 | Msa0846870 | 0.800454 | 1.430137e-48 | -8.615850e-47 |
| Msa0545680 | Msa0846870 | 0.805255 | 1.458342e-49 | -8.615850e-47 |
| Msa0547370 | Msa0846870 | 0.816266 | 6.042243e-52 | -8.615850e-47 |
| Msa0560950 | Msa0846870 | 0.809019 | 2.326362e-50 | -8.615850e-47 |
| Msa0561830 | Msa0846870 | 0.822578 | 2.198177e-53 | -8.615850e-47 |
| Msa0566280 | Msa0846870 | 0.805490 | 1.301538e-49 | -8.615850e-47 |
| Msa0567330 | Msa0846870 | 0.807594 | 4.683044e-50 | -8.615850e-47 |
| Msa0567570 | Msa0846870 | 0.825361 | 4.888275e-54 | -8.615850e-47 |
| Msa0568460 | Msa0846870 | -0.805629 | 1.217306e-49 | -8.615850e-47 |
| Msa0568920 | Msa0846870 | 0.819252 | 1.280236e-52 | -8.615850e-47 |
| Msa0572270 | Msa0846870 | -0.816993 | 4.153148e-52 | -8.615850e-47 |
| Msa0580890 | Msa0846870 | -0.800181 | 1.625793e-48 | -8.615850e-47 |
| Msa0587180 | Msa0846870 | 0.801118 | 1.047007e-48 | -8.615850e-47 |
| Msa0587930 | Msa0846870 | 0.828219 | 1.015343e-54 | -8.615850e-47 |
| Msa0597370 | Msa0846870 | -0.804229 | 2.388215e-49 | -8.615850e-47 |
| Msa0597800 | Msa0846870 | 0.810056 | 1.393418e-50 | -8.615850e-47 |
| Msa0597820 | Msa0846870 | 0.801794 | 7.610824e-49 | -8.615850e-47 |
| Msa0598470 | Msa0846870 | -0.815947 | 7.118419e-52 | -8.615850e-47 |
| Msa0602100 | Msa0846870 | 0.827568 | 1.455923e-54 | -8.615850e-47 |
| Msa0846870 | Msa0847140 | 0.816348 | 5.793433e-52 | -8.615850e-47 |
| Msa0846870 | Msa0854380 | 0.816767 | 4.667105e-52 | -8.615850e-47 |
| Msa0846870 | Msa0890210 | 0.816617 | 5.042253e-52 | -8.615850e-47 |
| Msa0846870 | Msa0896920 | 0.813896 | 2.029162e-51 | -8.615850e-47 |
| Msa0846870 | Msa0904590 | 0.816515 | 5.315481e-52 | -8.615850e-47 |
| Msa0846870 | Msa0936630 | 0.807496 | 4.912468e-50 | -8.615850e-47 |
| Msa0846870 | Msa0941150 | -0.824509 | 7.766041e-54 | -8.615850e-47 |
| Msa0846870 | Msa0961200 | -0.810194 | 1.301457e-50 | -8.615850e-47 |
| Msa0846870 | Msa0973850 | 0.819696 | 1.014334e-52 | -8.615850e-47 |
| Msa0846870 | Msa0974410 | -0.806696 | 7.255701e-50 | -8.615850e-47 |
| Msa0846870 | Msa0985980 | -0.806082 | 9.775012e-50 | -8.615850e-47 |
| Msa0846870 | Msa1019040 | -0.800906 | 1.156695e-48 | -8.615850e-47 |
| Msa0846870 | Msa1019420 | 0.813055 | 3.107008e-51 | -8.615850e-47 |
| Msa0846870 | Msa1031060 | 0.802869 | 4.571914e-49 | -8.615850e-47 |
| Msa0846870 | Msa1035050 | 0.809755 | 1.617831e-50 | -8.615850e-47 |
| Msa0846870 | Msa1040330 | 0.809952 | 1.467104e-50 | -8.615850e-47 |
| Msa0846870 | Msa1042300 | 0.843505 | 1.344951e-58 | -8.615850e-47 |
| Msa0846870 | Msa1063260 | 0.823708 | 1.197842e-53 | -8.615850e-47 |
| Msa0846870 | Msa1083660 | -0.800656 | 1.300860e-48 | -8.615850e-47 |
| Msa0846870 | Msa1085820 | 0.833029 | 6.741940e-56 | -8.615850e-47 |
| Msa0846870 | Msa1107520 | 0.807397 | 5.156780e-50 | -8.615850e-47 |
| Msa0846870 | Msa1108610 | 0.804711 | 1.894351e-49 | -8.615850e-47 |
| Msa0846870 | Msa1111910 | 0.810743 | 9.905284e-51 | -8.615850e-47 |
| Msa0846870 | Msa1119670 | 0.801766 | 7.713483e-49 | -8.615850e-47 |
| Msa0846870 | Msa1123490 | -0.800927 | 1.145397e-48 | -8.615850e-47 |
| Msa0846870 | Msa1127200 | 0.818827 | 1.599370e-52 | -8.615850e-47 |
| Msa0846870 | Msa1130150 | -0.800345 | 1.505544e-48 | -8.615850e-47 |
| Msa0846870 | Msa1131300 | -0.801896 | 7.251380e-49 | -8.615850e-47 |
| Msa0846870 | Msa1133850 | 0.801564 | 8.486077e-49 | -8.615850e-47 |
| Msa0846870 | Msa1136630 | 0.808209 | 3.465908e-50 | -8.615850e-47 |
| Msa0846870 | Msa1154320 | 0.800327 | 1.518104e-48 | -8.615850e-47 |
| Msa0846870 | Msa1156100 | -0.800540 | 1.374076e-48 | -8.615850e-47 |
| Msa0846870 | Msa1160540 | 0.817805 | 2.725787e-52 | -8.615850e-47 |
| Msa0846870 | Msa1187750 | 0.820279 | 7.458028e-53 | -8.615850e-47 |
| Msa0846870 | Msa1191270 | 0.834786 | 2.450252e-56 | -8.615850e-47 |
| Msa0846870 | Msa1194480 | -0.804062 | 2.586508e-49 | -8.615850e-47 |
| Msa0846870 | Msa1205120 | 0.835257 | 1.864129e-56 | -8.615850e-47 |
| Msa0846870 | Msa1208050 | 0.805634 | 1.214101e-49 | -8.615850e-47 |
| Msa0846870 | Msa1208140 | 0.803704 | 3.070034e-49 | -8.615850e-47 |
| Msa0846870 | Msa1211320 | 0.834994 | 2.172006e-56 | -8.615850e-47 |
| Msa0846870 | Msa1211940 | 0.802280 | 6.046574e-49 | -8.615850e-47 |
| Msa0846870 | Msa1220720 | 0.807234 | 5.583308e-50 | -8.615850e-47 |
| Msa0846870 | Msa1222900 | -0.809194 | 2.134740e-50 | -8.615850e-47 |
| Msa0846870 | Msa1223540 | 0.807154 | 5.806319e-50 | -8.615850e-47 |
| Msa0846870 | Msa1223620 | 0.809933 | 1.481326e-50 | -8.615850e-47 |
| Msa0846870 | Msa1223990 | 0.802576 | 5.253423e-49 | -8.615850e-47 |
| Msa0846870 | Msa1231440 | 0.806524 | 7.889662e-50 | -8.615850e-47 |
| Msa0846870 | Msa1241960 | 0.800144 | 1.654205e-48 | -8.615850e-47 |
| Msa0846870 | Msa1242160 | 0.812518 | 4.072268e-51 | -8.615850e-47 |
| Msa0846870 | Msa1259570 | 0.837575 | 4.793316e-57 | -8.615850e-47 |
| Msa0846870 | Msa1263520 | 0.813581 | 2.381391e-51 | -8.615850e-47 |
| Msa0846870 | Msa1265570 | 0.823261 | 1.523288e-53 | -8.615850e-47 |
| Msa0846870 | Msa1265940 | 0.832299 | 1.023298e-55 | -8.615850e-47 |
| Msa0846870 | Msa1268360 | 0.814871 | 1.235731e-51 | -8.615850e-47 |
| Msa0846870 | Msa1269500 | 0.806448 | 8.184930e-50 | -8.615850e-47 |
| Msa0846870 | Msa1273320 | 0.832504 | 9.101572e-56 | -8.615850e-47 |
| Msa0846870 | Msa1278000 | 0.800506 | 1.396257e-48 | -8.615850e-47 |
| Msa0846870 | Msa1281780 | 0.801339 | 9.434759e-49 | -8.615850e-47 |
| Msa0846870 | Msa1286860 | -0.809647 | 1.706386e-50 | -8.615850e-47 |
| Msa0846870 | Msa1287100 | -0.828404 | 9.159332e-55 | -8.615850e-47 |
| Msa0846870 | Msa1290090 | -0.807041 | 6.134640e-50 | -8.615850e-47 |
| Msa0846870 | Msa1295210 | -0.820666 | 6.080350e-53 | -8.615850e-47 |
| Msa0846870 | Msa1300570 | 0.801487 | 8.798687e-49 | -8.615850e-47 |
| Msa0846870 | Msa1303400 | 0.801628 | 8.231147e-49 | -8.615850e-47 |
| Msa0846870 | Msa1320160 | 0.806857 | 6.710600e-50 | -8.615850e-47 |
| Msa0846870 | Msa1321010 | 0.818784 | 1.636319e-52 | -8.615850e-47 |
| Msa0846870 | Msa1322960 | 0.805684 | 1.185312e-49 | -8.615850e-47 |
| Msa0846870 | Msa1334670 | 0.822742 | 2.012919e-53 | -8.615850e-47 |
| Msa0846870 | Msa1339530 | 0.819468 | 1.143477e-52 | -8.615850e-47 |
| Msa0846870 | Msa1344450 | 0.804647 | 1.954249e-49 | -8.615850e-47 |
| Msa0846870 | Msa1357840 | 0.812872 | 3.406335e-51 | -8.615850e-47 |
| Msa0846870 | Msa1362590 | 0.810794 | 9.656081e-51 | -8.615850e-47 |
| Msa0846870 | Msa1364690 | 0.819574 | 1.081318e-52 | -8.615850e-47 |
| Msa0846870 | Msa1365230 | 0.818976 | 1.479799e-52 | -8.615850e-47 |
| Msa0846870 | Msa1377190 | 0.835286 | 1.832642e-56 | -8.615850e-47 |
| Msa0846870 | Msa1405040 | -0.803577 | 3.261501e-49 | -8.615850e-47 |
| Msa0846870 | Msa1407810 | 0.817451 | 3.274627e-52 | -8.615850e-47 |
| Msa0846870 | Msa1417220 | 0.830406 | 2.990560e-55 | -8.615850e-47 |
| Msa0846870 | Msa1422820 | -0.800491 | 1.405923e-48 | -8.615850e-47 |
| Msa0846870 | Msa1431020 | 0.834471 | 2.939889e-56 | -8.615850e-47 |
| Msa0846870 | Msa1433360 | 0.804113 | 2.524223e-49 | -8.615850e-47 |
| Msa0846870 | Msa1437590 | 0.841786 | 3.847433e-58 | -8.615850e-47 |
| Msa0846870 | Msa1437780 | 0.817693 | 2.888424e-52 | -8.615850e-47 |
| Msa0846870 | Msa1445530 | 0.804592 | 2.005773e-49 | -8.615850e-47 |
| Msa0846870 | Msa1462610 | 0.827317 | 1.672106e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0846870 | MtrunA17_Chr5g0419001 | 90.465 | 409 | 14 | 3 | 1 | 384 | 1 | 409 | 0.0 | 725 |
| Msa0846870 | MtrunA17_Chr4g0046561 | 70.822 | 353 | 71 | 4 | 51 | 381 | 59 | 401 | 2.80e-171 | 483 |
| Msa0846870 | MtrunA17_Chr3g0097931 | 41.065 | 263 | 146 | 4 | 111 | 368 | 142 | 400 | 2.70e-57 | 192 |
| Msa0846870 | MtrunA17_Chr2g0288011 | 39.706 | 272 | 155 | 3 | 104 | 370 | 129 | 396 | 6.75e-57 | 191 |
| Msa0846870 | MtrunA17_Chr4g0074541 | 40.370 | 270 | 152 | 3 | 104 | 368 | 126 | 391 | 3.49e-55 | 186 |
| Msa0846870 | MtrunA17_Chr2g0291851 | 37.423 | 326 | 170 | 8 | 65 | 365 | 75 | 391 | 2.69e-54 | 184 |
| Msa0846870 | MtrunA17_Chr4g0058971 | 38.610 | 259 | 147 | 3 | 117 | 368 | 123 | 376 | 4.58e-50 | 172 |
| Msa0846870 | MtrunA17_Chr3g0117501 | 38.267 | 277 | 164 | 3 | 106 | 378 | 137 | 410 | 8.56e-49 | 170 |
| Msa0846870 | MtrunA17_Chr6g0449891 | 39.175 | 291 | 158 | 7 | 96 | 379 | 140 | 418 | 1.51e-46 | 164 |
| Msa0846870 | MtrunA17_Chr1g0160071 | 26.407 | 231 | 164 | 2 | 146 | 374 | 85 | 311 | 9.66e-19 | 86.7 |
| Msa0846870 | MtrunA17_Chr3g0114581 | 26.407 | 231 | 164 | 2 | 146 | 374 | 86 | 312 | 1.69e-18 | 85.9 |
| Msa0846870 | MtrunA17_Chr4g0008071 | 28.571 | 308 | 162 | 14 | 91 | 376 | 37 | 308 | 2.63e-13 | 70.1 |
| Msa0846870 | MtrunA17_Chr3g0112981 | 25.850 | 294 | 188 | 10 | 91 | 376 | 49 | 320 | 5.95e-12 | 66.2 |
| Msa0846870 | MtrunA17_Chr5g0436341 | 26.871 | 294 | 185 | 11 | 91 | 376 | 33 | 304 | 1.95e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0846870 | AT5G46110.1 | 70.145 | 345 | 71 | 3 | 60 | 381 | 75 | 410 | 1.91e-169 | 479 |
| Msa0846870 | AT5G46110.4 | 70.882 | 340 | 67 | 3 | 60 | 376 | 75 | 405 | 6.79e-169 | 478 |
| Msa0846870 | AT5G46110.2 | 79.078 | 282 | 59 | 0 | 100 | 381 | 16 | 297 | 1.01e-166 | 468 |
| Msa0846870 | AT5G46110.3 | 67.826 | 345 | 68 | 4 | 60 | 381 | 75 | 399 | 7.18e-160 | 455 |
| Msa0846870 | AT5G54800.1 | 36.119 | 335 | 183 | 5 | 61 | 368 | 57 | 387 | 3.41e-58 | 194 |
| Msa0846870 | AT1G61800.1 | 40.370 | 270 | 152 | 3 | 104 | 368 | 122 | 387 | 5.50e-57 | 191 |
| Msa0846870 | AT1G61800.2 | 40.000 | 270 | 153 | 3 | 104 | 368 | 122 | 387 | 1.80e-56 | 190 |
| Msa0846870 | AT5G17630.1 | 39.925 | 268 | 149 | 6 | 114 | 375 | 147 | 408 | 4.44e-55 | 187 |
| Msa0846870 | AT3G01550.1 | 39.350 | 277 | 154 | 3 | 96 | 368 | 106 | 372 | 2.03e-46 | 163 |
| Msa0846870 | AT5G33320.1 | 35.897 | 273 | 168 | 3 | 110 | 378 | 139 | 408 | 1.02e-41 | 151 |
| Msa0846870 | AT3G01550.2 | 37.906 | 277 | 153 | 4 | 96 | 368 | 106 | 367 | 1.74e-40 | 147 |
| Msa0846870 | AT4G03950.1 | 36.626 | 243 | 106 | 12 | 139 | 374 | 58 | 259 | 4.36e-27 | 108 |
| Msa0846870 | AT1G77610.1 | 26.407 | 231 | 164 | 2 | 146 | 374 | 80 | 306 | 1.05e-17 | 84.0 |
| Msa0846870 | AT1G21870.1 | 26.724 | 232 | 164 | 3 | 146 | 375 | 86 | 313 | 1.69e-16 | 80.5 |
| Msa0846870 | AT3G11320.1 | 26.280 | 293 | 188 | 9 | 91 | 376 | 35 | 306 | 1.43e-13 | 71.2 |
| Msa0846870 | AT5G05820.1 | 25.510 | 294 | 191 | 9 | 91 | 377 | 35 | 307 | 1.34e-11 | 65.5 |
Find 89 sgRNAs with CRISPR-Local
Find 226 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCATCTAATGGTTGAAATTA+AGG | 0.168763 | 5_4:-27700918 | None:intergenic |
| GGACCCCAACTGATGGAATT+TGG | 0.212279 | 5_4:-27702055 | Msa0846870:CDS |
| CTTTCCTTTATCAGCAATAT+TGG | 0.247686 | 5_4:-27701236 | Msa0846870:three_prime_UTR |
| ATAAATTTATGAGAAGAATT+TGG | 0.273849 | 5_4:-27701202 | Msa0846870:three_prime_UTR |
| AAATTTCCTGCATTGGTTAC+TGG | 0.274557 | 5_4:-27704267 | Msa0846870:CDS |
| GGCCTAAACCCCAGCTAAAA+AGG | 0.277465 | 5_4:+27703798 | None:intergenic |
| TGCTTTAATCACTGAATAGA+TGG | 0.293194 | 5_4:+27701413 | None:intergenic |
| TGATCCAATATTGCTGATAA+AGG | 0.300947 | 5_4:+27701232 | None:intergenic |
| AACATATTCCACTGTCTCTA+TGG | 0.306938 | 5_4:-27702890 | Msa0846870:CDS |
| AAAAGAGTTTCAACCAGTTA+TGG | 0.329715 | 5_4:-27704726 | Msa0846870:CDS |
| CTATCATCAGCCAATGAATA+AGG | 0.337953 | 5_4:-27703428 | Msa0846870:intron |
| ATACTTCAACAATCCATAAC+TGG | 0.344856 | 5_4:+27704713 | None:intergenic |
| TTTCTCACCAAAACTCTTTG+AGG | 0.348207 | 5_4:+27704287 | None:intergenic |
| GGTACTGCTATTGCAATTGC+TGG | 0.350916 | 5_4:-27701441 | Msa0846870:CDS |
| GCAGCTTGCTACTAATACTT+TGG | 0.357987 | 5_4:-27701825 | Msa0846870:intron |
| GCTGCTAAGGCTGCAACAAC+TGG | 0.364005 | 5_4:+27704606 | None:intergenic |
| AAAATGTAGTGAAAACAATA+TGG | 0.366239 | 5_4:-27701001 | Msa0846870:three_prime_UTR |
| TCAGCTTCTCAGTTCGTCTT+AGG | 0.366693 | 5_4:-27702915 | Msa0846870:CDS |
| GTCCAATCCTCAAAGAGTTT+TGG | 0.368718 | 5_4:-27704294 | Msa0846870:CDS |
| CTTTGAACTGATATGAGAAC+TGG | 0.370164 | 5_4:+27704780 | None:intergenic |
| TTTCCAACTGCATGTGTTAG+TGG | 0.372398 | 5_4:+27701791 | None:intergenic |
| CACCAAAACTCTTTGAGGAT+TGG | 0.379697 | 5_4:+27704292 | None:intergenic |
| TAACTGAACTGTCTTTCAAT+TGG | 0.389795 | 5_4:-27702623 | Msa0846870:CDS |
| AAGCTTGGTGTTCTCTCCAT+TGG | 0.390631 | 5_4:-27704661 | Msa0846870:CDS |
| TGTCATTGGATTCTCTATAG+TGG | 0.400424 | 5_4:-27701750 | Msa0846870:CDS |
| TCTCCATTGGTGAAGGCGTT+GGG | 0.401683 | 5_4:-27704648 | Msa0846870:CDS |
| AAATCCAAATTCCATCAGTT+GGG | 0.406228 | 5_4:+27702051 | None:intergenic |
| GGATTCTCTATAGTGGTGTT+TGG | 0.406870 | 5_4:-27701743 | Msa0846870:intron |
| AACAAGAGCTCCTTATTCAT+TGG | 0.407138 | 5_4:+27703418 | None:intergenic |
| CATCTAATGGTTGAAATTAA+GGG | 0.408534 | 5_4:-27700917 | None:intergenic |
| AATGAACTCACAAGAATTGC+CGG | 0.409784 | 5_4:+27702360 | None:intergenic |
| CTGCAGCCCTTACATCTTAA+CGG | 0.410285 | 5_4:-27701264 | Msa0846870:exon |
| TTGGATGCTTCTTAGATTGA+AGG | 0.410563 | 5_4:-27702076 | Msa0846870:intron |
| CTCTCCATTGGTGAAGGCGT+TGG | 0.411785 | 5_4:-27704649 | Msa0846870:CDS |
| TAAATCCAAATTCCATCAGT+TGG | 0.423055 | 5_4:+27702050 | None:intergenic |
| GGTGAAATTGAAATCTCTAA+TGG | 0.426650 | 5_4:-27704570 | Msa0846870:CDS |
| TATCTCTTACCTGCATCTAA+TGG | 0.433927 | 5_4:-27700930 | Msa0846870:three_prime_UTR |
| AACAAGATATCCACACAAAC+TGG | 0.434241 | 5_4:-27701468 | Msa0846870:CDS |
| GTGAAATTGAAATCTCTAAT+GGG | 0.435720 | 5_4:-27704569 | Msa0846870:intron |
| TCTGTTGTACATCTCCTAGT+GGG | 0.441652 | 5_4:-27703833 | Msa0846870:CDS |
| AGAGCGTCCGTTAAGATGTA+AGG | 0.446459 | 5_4:+27701257 | None:intergenic |
| AAACTTTGTCAGTCCTACTT+TGG | 0.455678 | 5_4:+27702015 | None:intergenic |
| AGAAATGCTATTGCCAAAGT+AGG | 0.458021 | 5_4:-27702028 | Msa0846870:CDS |
| GTATAACTCACTGCACGCTT+TGG | 0.465875 | 5_4:+27703773 | None:intergenic |
| AGGATACCTGATTGTAAAGA+TGG | 0.470401 | 5_4:+27701960 | None:intergenic |
| AAAAGCTTACCTAAAACAAC+AGG | 0.477777 | 5_4:+27702855 | None:intergenic |
| AAACTAAAATCCACAGGTAG+TGG | 0.480316 | 5_4:+27701079 | None:intergenic |
| AAATAAGCTGAAGAAATTTG+AGG | 0.480991 | 5_4:+27704756 | None:intergenic |
| TGGTGAGAAATTTCCTGCAT+TGG | 0.485539 | 5_4:-27704274 | Msa0846870:CDS |
| CAATATTCTCTAGTTTCTCT+AGG | 0.488332 | 5_4:-27700975 | Msa0846870:three_prime_UTR |
| GAACTGTCTTTCAATTGGAC+TGG | 0.491188 | 5_4:-27702618 | Msa0846870:CDS |
| ATCATCAGCATCTGCTGCTA+AGG | 0.492326 | 5_4:+27704593 | None:intergenic |
| GGTGTTCTCTCCATTGGTGA+AGG | 0.503498 | 5_4:-27704655 | Msa0846870:CDS |
| TAATTTCAACCATTAGATGC+AGG | 0.505150 | 5_4:+27700921 | None:intergenic |
| GTATAGAACACTTCAATATG+AGG | 0.519052 | 5_4:-27704694 | Msa0846870:CDS |
| ATGAACTCACAAGAATTGCC+GGG | 0.520984 | 5_4:+27702361 | None:intergenic |
| TCATGTTATTCCACTACCTG+TGG | 0.521743 | 5_4:-27701089 | Msa0846870:three_prime_UTR |
| AACACTTCAATATGAGGCTA+AGG | 0.522461 | 5_4:-27704688 | Msa0846870:CDS |
| TGGTGCTAGCAACTTATGCT+TGG | 0.523569 | 5_4:+27701023 | None:intergenic |
| AAGAAACCAGTAACCAATGC+AGG | 0.530659 | 5_4:+27704261 | None:intergenic |
| TCAGCAATATTGGATCAAGT+TGG | 0.532581 | 5_4:-27701226 | Msa0846870:three_prime_UTR |
| AACTGATATGAGAACTGGGT+TGG | 0.544158 | 5_4:+27704785 | None:intergenic |
| CGTTGGGAGTAAGACAAAGA+AGG | 0.550850 | 5_4:-27704632 | Msa0846870:CDS |
| ACTCCCAACGCCTTCACCAA+TGG | 0.553120 | 5_4:+27704645 | None:intergenic |
| CTGTTGTACATCTCCTAGTG+GGG | 0.559205 | 5_4:-27703832 | Msa0846870:CDS |
| TTCACTCTTAGGTGTATCGA+TGG | 0.562553 | 5_4:-27702652 | Msa0846870:intron |
| TTCTGTTGTACATCTCCTAG+TGG | 0.562692 | 5_4:-27703834 | Msa0846870:CDS |
| GATTGAAGGACCCCAACTGA+TGG | 0.572073 | 5_4:-27702062 | Msa0846870:CDS |
| TGAGGCTAAGGATTCAAGCT+TGG | 0.575177 | 5_4:-27704676 | Msa0846870:CDS |
| TACCATAAACTAAAATCCAC+AGG | 0.576741 | 5_4:+27701073 | None:intergenic |
| AAAGATAGCCATAGAGACAG+TGG | 0.584706 | 5_4:+27702882 | None:intergenic |
| ATATCCACACAAACTGGCAT+TGG | 0.586556 | 5_4:-27701462 | Msa0846870:CDS |
| AGGGCATGACAAAATGCCAC+TGG | 0.594665 | 5_4:+27703385 | None:intergenic |
| TGTTGTACATCTCCTAGTGG+GGG | 0.597775 | 5_4:-27703831 | Msa0846870:CDS |
| AACTCACTGCACGCTTTGGT+AGG | 0.605690 | 5_4:+27703777 | None:intergenic |
| ATAGAGACAGTGGAATATGT+TGG | 0.609639 | 5_4:+27702892 | None:intergenic |
| AGTACCAATGCCAGTTTGTG+TGG | 0.619792 | 5_4:+27701458 | None:intergenic |
| TTAGCAGCAGATGCTGATGA+TGG | 0.621134 | 5_4:-27704591 | Msa0846870:CDS |
| AACAGCAGCAAATGATACAT+TGG | 0.623207 | 5_4:+27703348 | None:intergenic |
| GAGCGTCCGTTAAGATGTAA+GGG | 0.623605 | 5_4:+27701258 | None:intergenic |
| GATGCAGGTAAGAGATACAG+AGG | 0.624575 | 5_4:+27700936 | None:intergenic |
| GCGCCACTAACACATGCAGT+TGG | 0.626603 | 5_4:-27701794 | Msa0846870:CDS |
| TGAACTCACAAGAATTGCCG+GGG | 0.630819 | 5_4:+27702362 | None:intergenic |
| AATCCAAATTCCATCAGTTG+GGG | 0.641106 | 5_4:+27702052 | None:intergenic |
| CTTGTTACTATTGACTCCAG+TGG | 0.644188 | 5_4:-27703401 | Msa0846870:CDS |
| TTTGAACTGATATGAGAACT+GGG | 0.645733 | 5_4:+27704781 | None:intergenic |
| CATTGGACATGACATGACCA+AGG | 0.673962 | 5_4:+27703365 | None:intergenic |
| ATTGGACATGACATGACCAA+GGG | 0.677416 | 5_4:+27703366 | None:intergenic |
| GAACTCACAAGAATTGCCGG+GGG | 0.732753 | 5_4:+27702363 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTAAATATAATAATACAC+AGG | + | chr5_4:27701973-27701992 | None:intergenic | 10.0% |
| !!! | TATATATTTTTAAAACAAAC+TGG | - | chr5_4:27702115-27702134 | Msa0846870:intron | 10.0% |
| !!! | CTGTAAAATTTTAAATAATT+TGG | + | chr5_4:27703272-27703291 | None:intergenic | 10.0% |
| !! | ATAAATAAAGAAAAAATTGT+AGG | + | chr5_4:27704371-27704390 | None:intergenic | 10.0% |
| !! | TAATCAAAAGAATTAAGAAA+CGG | + | chr5_4:27701383-27701402 | None:intergenic | 15.0% |
| !! | ATAAAGTTATAGAGTTAATT+TGG | + | chr5_4:27701800-27701819 | None:intergenic | 15.0% |
| !!! | ATAACTTTATAGCTTTTTAT+TGG | - | chr5_4:27701810-27701829 | Msa0846870:CDS | 15.0% |
| !! | GAATAGATTAAAACTATATT+CGG | - | chr5_4:27702590-27702609 | Msa0846870:CDS | 15.0% |
| !!! | TTATTTAAAATTTTACAGAC+TGG | - | chr5_4:27703274-27703293 | Msa0846870:intron | 15.0% |
| !! | AAAATGAACAAATTATTTGT+AGG | - | chr5_4:27703495-27703514 | Msa0846870:intron | 15.0% |
| !! | AAATGAACAAATTATTTGTA+GGG | - | chr5_4:27703496-27703515 | Msa0846870:intron | 15.0% |
| !! | AAAAATCAATAGTAAAATCA+CGG | + | chr5_4:27703598-27703617 | None:intergenic | 15.0% |
| !!! | CCAAAATTTTAGAATATAAT+GGG | + | chr5_4:27704216-27704235 | None:intergenic | 15.0% |
| !!! | ACCAAAATTTTAGAATATAA+TGG | + | chr5_4:27704217-27704236 | None:intergenic | 15.0% |
| !! | ATAAATTTATGAGAAGAATT+TGG | - | chr5_4:27704516-27704535 | Msa0846870:intron | 15.0% |
| !!! | TGAAAAATGTTTCTAAATAT+TGG | + | chr5_4:27704547-27704566 | None:intergenic | 15.0% |
| !! | TATCTTAATTAAGTACGTAT+AGG | + | chr5_4:27701263-27701282 | None:intergenic | 20.0% |
| !!! | TATTTTAATGTTCCTCATTT+GGG | + | chr5_4:27701593-27701612 | None:intergenic | 20.0% |
| !!! | TTATTTTAATGTTCCTCATT+TGG | + | chr5_4:27701594-27701613 | None:intergenic | 20.0% |
| !!! | GAAATGTTTAATACCTTTTA+TGG | + | chr5_4:27702415-27702434 | None:intergenic | 20.0% |
| !! | AATCTATTCCTAATCAATTT+AGG | + | chr5_4:27702579-27702598 | None:intergenic | 20.0% |
| !! | CTAAATAATATGATTGTGTT+TGG | + | chr5_4:27702682-27702701 | None:intergenic | 20.0% |
| !! | AATTTCATGATTAGTATGTT+TGG | + | chr5_4:27702713-27702732 | None:intergenic | 20.0% |
| !! | ATAAATATATAACTGAGCAT+AGG | + | chr5_4:27702971-27702990 | None:intergenic | 20.0% |
| !!! | GTTTTAAGAATTTGATACAT+AGG | + | chr5_4:27702996-27703015 | None:intergenic | 20.0% |
| !! | TGTATCAAATTCTTAAAACT+TGG | - | chr5_4:27702997-27703016 | Msa0846870:intron | 20.0% |
| !!! | TCTATATTCTAAAAAAGCAA+TGG | - | chr5_4:27703168-27703187 | Msa0846870:intron | 20.0% |
| !!! | AAAGTGAACAAATTTTTTGT+AGG | - | chr5_4:27703522-27703541 | Msa0846870:intron | 20.0% |
| !!! | AAGTGAACAAATTTTTTGTA+GGG | - | chr5_4:27703523-27703542 | Msa0846870:intron | 20.0% |
| !! | AAAATCAATAGTAAAATCAC+GGG | + | chr5_4:27703597-27703616 | None:intergenic | 20.0% |
| !! | AAGTTAGAAAAAGAATATGA+TGG | + | chr5_4:27704037-27704056 | None:intergenic | 20.0% |
| !! | AGATCATAAACGATATAAAA+TGG | - | chr5_4:27704158-27704177 | Msa0846870:intron | 20.0% |
| !!! | CCCATTATATTCTAAAATTT+TGG | - | chr5_4:27704213-27704232 | Msa0846870:intron | 20.0% |
| !!! | AAAATTTTGGTAACATTTGT+AGG | - | chr5_4:27704226-27704245 | Msa0846870:intron | 20.0% |
| !!! | ATATTGTTTTCACTACATTT+TGG | + | chr5_4:27704718-27704737 | None:intergenic | 20.0% |
| !! | AAAATGTAGTGAAAACAATA+TGG | - | chr5_4:27704717-27704736 | Msa0846870:CDS | 20.0% |
| ! | AAATAAGCTGAAGAAATTTG+AGG | + | chr5_4:27700965-27700984 | None:intergenic | 25.0% |
| ! | GTGAAATTGAAATCTCTAAT+GGG | - | chr5_4:27701149-27701168 | Msa0846870:three_prime_UTR | 25.0% |
| ! | TTTCTCATGATCACATAAAA+AGG | + | chr5_4:27701507-27701526 | None:intergenic | 25.0% |
| ! | AATTATGAAGTTAATCATCG+AGG | + | chr5_4:27701774-27701793 | None:intergenic | 25.0% |
| ! | CGATGATTAACTTCATAATT+AGG | - | chr5_4:27701774-27701793 | Msa0846870:CDS | 25.0% |
| !! | TCTTTTACACATACCATAAA+AGG | - | chr5_4:27702399-27702418 | Msa0846870:CDS | 25.0% |
| ! | AATGTTAACAACAAGAACAT+AGG | + | chr5_4:27702460-27702479 | None:intergenic | 25.0% |
| !! | TAAAATTTTACAGACTGGAA+TGG | - | chr5_4:27703279-27703298 | Msa0846870:intron | 25.0% |
| !! | AATTAACCTTTCAGTAGTTT+TGG | + | chr5_4:27703389-27703408 | None:intergenic | 25.0% |
| !! | ACTACTGAAAGGTTAATTTT+AGG | - | chr5_4:27703391-27703410 | Msa0846870:CDS | 25.0% |
| !! | CTACTGAAAGGTTAATTTTA+GGG | - | chr5_4:27703392-27703411 | Msa0846870:CDS | 25.0% |
| ! | TGAAAATCATGAATTATGCA+AGG | - | chr5_4:27703554-27703573 | Msa0846870:intron | 25.0% |
| TTTGAACTGATATGAGAACT+GGG | + | chr5_4:27700940-27700959 | None:intergenic | 30.0% | |
| ! | TAACTGGTTGAAACTCTTTT+AGG | + | chr5_4:27700992-27701011 | None:intergenic | 30.0% |
| AAAAGAGTTTCAACCAGTTA+TGG | - | chr5_4:27700992-27701011 | Msa0846870:three_prime_UTR | 30.0% | |
| ATACTTCAACAATCCATAAC+TGG | + | chr5_4:27701008-27701027 | None:intergenic | 30.0% | |
| GTATAGAACACTTCAATATG+AGG | - | chr5_4:27701024-27701043 | Msa0846870:three_prime_UTR | 30.0% | |
| GGTGAAATTGAAATCTCTAA+TGG | - | chr5_4:27701148-27701167 | Msa0846870:three_prime_UTR | 30.0% | |
| TCTCAAATTATCAACAGTGT+CGG | + | chr5_4:27701327-27701346 | None:intergenic | 30.0% | |
| GATTATTGATGTCCAATTAC+AGG | - | chr5_4:27701398-27701417 | Msa0846870:CDS | 30.0% | |
| ! | CTGGTTTCTTTTTCTTTATG+TGG | - | chr5_4:27701470-27701489 | Msa0846870:CDS | 30.0% |
| AGGAAAACATACTATGGATA+TGG | + | chr5_4:27701754-27701773 | None:intergenic | 30.0% | |
| ATTAGCATAATGTAAAGCGA+AGG | + | chr5_4:27701838-27701857 | None:intergenic | 30.0% | |
| TCTTAGGGTAAACTAGTTAT+TGG | - | chr5_4:27702523-27702542 | Msa0846870:intron | 30.0% | |
| TATTGGAAATTCAAGTGTGA+TGG | - | chr5_4:27702540-27702559 | Msa0846870:intron | 30.0% | |
| GAGACTTTCCTAAATTGATT+AGG | - | chr5_4:27702568-27702587 | Msa0846870:CDS | 30.0% | |
| GATTAAAACTATATTCGGTC+CGG | - | chr5_4:27702595-27702614 | Msa0846870:CDS | 30.0% | |
| TTTATCACTCTTTGTAGCTT+TGG | - | chr5_4:27702763-27702782 | Msa0846870:intron | 30.0% | |
| AAAAGCTTACCTAAAACAAC+AGG | + | chr5_4:27702866-27702885 | None:intergenic | 30.0% | |
| ! | TGTCCTTTCTTATTTCTTTC+TGG | - | chr5_4:27702885-27702904 | Msa0846870:CDS | 30.0% |
| CAACCAGAAAGAAATAAGAA+AGG | + | chr5_4:27702891-27702910 | None:intergenic | 30.0% | |
| CTAATATGAGTTTCACTCTT+AGG | - | chr5_4:27703055-27703074 | Msa0846870:intron | 30.0% | |
| TAACTGAACTGTCTTTCAAT+TGG | - | chr5_4:27703095-27703114 | Msa0846870:intron | 30.0% | |
| TATGAGCAAAAGTAACAATG+TGG | + | chr5_4:27703208-27703227 | None:intergenic | 30.0% | |
| ! | AAAGCGCTCATTTGTTAATA+AGG | + | chr5_4:27703433-27703452 | None:intergenic | 30.0% |
| ATTTATAGGGACTAAACGTA+GGG | + | chr5_4:27703460-27703479 | None:intergenic | 30.0% | |
| AGTCCCTATAAATGCAAAAT+AGG | - | chr5_4:27703467-27703486 | Msa0846870:intron | 30.0% | |
| GTCCCTATAAATGCAAAATA+GGG | - | chr5_4:27703468-27703487 | Msa0846870:intron | 30.0% | |
| ! | GTCCCTATTTTGCATTTATA+GGG | + | chr5_4:27703473-27703492 | None:intergenic | 30.0% |
| ! | AGTCCCTATTTTGCATTTAT+AGG | + | chr5_4:27703474-27703493 | None:intergenic | 30.0% |
| AAATCCAAATTCCATCAGTT+GGG | + | chr5_4:27703670-27703689 | None:intergenic | 30.0% | |
| TAAATCCAAATTCCATCAGT+TGG | + | chr5_4:27703671-27703690 | None:intergenic | 30.0% | |
| ! | GTTTTACCATCTTTACAATC+AGG | - | chr5_4:27703752-27703771 | Msa0846870:intron | 30.0% |
| ! | TTGAAGAGAGTTTTTGTCAT+TGG | - | chr5_4:27703954-27703973 | Msa0846870:intron | 30.0% |
| TCCTATTCTATTTGTTCATG+AGG | - | chr5_4:27704078-27704097 | Msa0846870:intron | 30.0% | |
| ACCTCATGAACAAATAGAAT+AGG | + | chr5_4:27704082-27704101 | None:intergenic | 30.0% | |
| TGCTTTAATCACTGAATAGA+TGG | + | chr5_4:27704308-27704327 | None:intergenic | 30.0% | |
| CTTTCCTTTATCAGCAATAT+TGG | - | chr5_4:27704482-27704501 | Msa0846870:intron | 30.0% | |
| TGATCCAATATTGCTGATAA+AGG | + | chr5_4:27704489-27704508 | None:intergenic | 30.0% | |
| !!! | TACCTGTGGATTTTAGTTTA+TGG | - | chr5_4:27704643-27704662 | Msa0846870:CDS | 30.0% |
| TACCATAAACTAAAATCCAC+AGG | + | chr5_4:27704648-27704667 | None:intergenic | 30.0% | |
| ! | CAATATTCTCTAGTTTCTCT+AGG | - | chr5_4:27704743-27704762 | Msa0846870:CDS | 30.0% |
| TAATTTCAACCATTAGATGC+AGG | + | chr5_4:27704800-27704819 | None:intergenic | 30.0% | |
| CTTTGAACTGATATGAGAAC+TGG | + | chr5_4:27700941-27700960 | None:intergenic | 35.0% | |
| AACACTTCAATATGAGGCTA+AGG | - | chr5_4:27701030-27701049 | Msa0846870:three_prime_UTR | 35.0% | |
| CTGTATTCGTGCTTTATAGT+TGG | + | chr5_4:27701291-27701310 | None:intergenic | 35.0% | |
| TTTCTCACCAAAACTCTTTG+AGG | + | chr5_4:27701434-27701453 | None:intergenic | 35.0% | |
| !! | AAATTTCCTGCATTGGTTAC+TGG | - | chr5_4:27701451-27701470 | Msa0846870:CDS | 35.0% |
| TGATCATGAGAAAATCTTCG+AGG | - | chr5_4:27701514-27701533 | Msa0846870:intron | 35.0% | |
| ATGAGAAAATCTTCGAGGTA+AGG | - | chr5_4:27701519-27701538 | Msa0846870:intron | 35.0% | |
| AAGTAGAGCGAAAAGAGAAT+CGG | - | chr5_4:27701564-27701583 | Msa0846870:intron | 35.0% | |
| AAATTGTCCTACTTCTATGC+AGG | - | chr5_4:27701674-27701693 | Msa0846870:intron | 35.0% | |
| TCATCGAGGAAAACATACTA+TGG | + | chr5_4:27701760-27701779 | None:intergenic | 35.0% | |
| GATCGAACAATTGAGACTTT+CGG | - | chr5_4:27702017-27702036 | Msa0846870:CDS | 35.0% | |
| ACAATTGAGACTTTCGGATA+AGG | - | chr5_4:27702023-27702042 | Msa0846870:CDS | 35.0% | |
| TTTCACAACCAATCTGGATT+AGG | + | chr5_4:27702209-27702228 | None:intergenic | 35.0% | |
| ! | CTTATTCATTGGCTGATGAT+AGG | + | chr5_4:27702292-27702311 | None:intergenic | 35.0% |
| CTATCATCAGCCAATGAATA+AGG | - | chr5_4:27702290-27702309 | Msa0846870:intron | 35.0% | |
| AACAAGAGCTCCTTATTCAT+TGG | + | chr5_4:27702303-27702322 | None:intergenic | 35.0% | |
| AACAGCAGCAAATGATACAT+TGG | + | chr5_4:27702373-27702392 | None:intergenic | 35.0% | |
| ! | TAACTAGTTTACCCTAAGAC+CGG | + | chr5_4:27702522-27702541 | None:intergenic | 35.0% |
| !! | GAAGCTGAAGCATTGAAAAA+TGG | + | chr5_4:27702791-27702810 | None:intergenic | 35.0% |
| ATAGAGACAGTGGAATATGT+TGG | + | chr5_4:27702829-27702848 | None:intergenic | 35.0% | |
| AACATATTCCACTGTCTCTA+TGG | - | chr5_4:27702828-27702847 | Msa0846870:intron | 35.0% | |
| !!! | TCTTTGACTCCTGTTGTTTT+AGG | - | chr5_4:27702854-27702873 | Msa0846870:intron | 35.0% |
| AATGAACTCACAAGAATTGC+CGG | + | chr5_4:27703361-27703380 | None:intergenic | 35.0% | |
| TTGCTACCAAAACTACTGAA+AGG | - | chr5_4:27703380-27703399 | Msa0846870:CDS | 35.0% | |
| CATTTATAGGGACTAAACGT+AGG | + | chr5_4:27703461-27703480 | None:intergenic | 35.0% | |
| TTGGATGCTTCTTAGATTGA+AGG | - | chr5_4:27703642-27703661 | Msa0846870:intron | 35.0% | |
| AATCCAAATTCCATCAGTTG+GGG | + | chr5_4:27703669-27703688 | None:intergenic | 35.0% | |
| AGAAATGCTATTGCCAAAGT+AGG | - | chr5_4:27703690-27703709 | Msa0846870:intron | 35.0% | |
| AAACTTTGTCAGTCCTACTT+TGG | + | chr5_4:27703706-27703725 | None:intergenic | 35.0% | |
| ! | AGTTTCTGTCTGATCTTTTC+TGG | - | chr5_4:27703721-27703740 | Msa0846870:intron | 35.0% |
| AGGATACCTGATTGTAAAGA+TGG | + | chr5_4:27703761-27703780 | None:intergenic | 35.0% | |
| CAACACTTGACTAAAACACA+AGG | + | chr5_4:27703781-27703800 | None:intergenic | 35.0% | |
| TGTCATTGGATTCTCTATAG+TGG | - | chr5_4:27703968-27703987 | Msa0846870:intron | 35.0% | |
| AACAAGATATCCACACAAAC+TGG | - | chr5_4:27704250-27704269 | Msa0846870:CDS | 35.0% | |
| CAAACATCGAAGAGCAAAAA+CGG | - | chr5_4:27704326-27704345 | Msa0846870:intron | 35.0% | |
| AAACATCGAAGAGCAAAAAC+GGG | - | chr5_4:27704327-27704346 | Msa0846870:intron | 35.0% | |
| ATCAAGATGACAAGAGACAT+AGG | + | chr5_4:27704398-27704417 | None:intergenic | 35.0% | |
| TCAGCAATATTGGATCAAGT+TGG | - | chr5_4:27704492-27704511 | Msa0846870:intron | 35.0% | |
| AAACTAAAATCCACAGGTAG+TGG | + | chr5_4:27704642-27704661 | None:intergenic | 35.0% | |
| TATCTCTTACCTGCATCTAA+TGG | - | chr5_4:27704788-27704807 | Msa0846870:CDS | 35.0% | |
| AACTGATATGAGAACTGGGT+TGG | + | chr5_4:27700936-27700955 | None:intergenic | 40.0% | |
| AAAGCACGAATACAGACACA+CGG | - | chr5_4:27701296-27701315 | Msa0846870:intron | 40.0% | |
| ! | GTCCAATCCTCAAAGAGTTT+TGG | - | chr5_4:27701424-27701443 | Msa0846870:CDS | 40.0% |
| ! | CACCAAAACTCTTTGAGGAT+TGG | + | chr5_4:27701429-27701448 | None:intergenic | 40.0% |
| TGGTGAGAAATTTCCTGCAT+TGG | - | chr5_4:27701444-27701463 | Msa0846870:CDS | 40.0% | |
| AAGAAACCAGTAACCAATGC+AGG | + | chr5_4:27701460-27701479 | None:intergenic | 40.0% | |
| !! | AGAAGTACCTGCATAGAAGT+AGG | + | chr5_4:27701684-27701703 | None:intergenic | 40.0% |
| TTCTGTTGTACATCTCCTAG+TGG | - | chr5_4:27701884-27701903 | Msa0846870:intron | 40.0% | |
| TCTGTTGTACATCTCCTAGT+GGG | - | chr5_4:27701885-27701904 | Msa0846870:intron | 40.0% | |
| !! | TGGTGTATTGCCTTTTTAGC+TGG | - | chr5_4:27701910-27701929 | Msa0846870:intron | 40.0% |
| !!! | GGTGTATTGCCTTTTTAGCT+GGG | - | chr5_4:27701911-27701930 | Msa0846870:intron | 40.0% |
| !!! | GTGTATTGCCTTTTTAGCTG+GGG | - | chr5_4:27701912-27701931 | Msa0846870:intron | 40.0% |
| CAATTGTTCGATCTCTGGTA+CGG | + | chr5_4:27702010-27702029 | None:intergenic | 40.0% | |
| AGTCTCAATTGTTCGATCTC+TGG | + | chr5_4:27702015-27702034 | None:intergenic | 40.0% | |
| ACTTTCGGATAAGGTTCAAC+TGG | - | chr5_4:27702032-27702051 | Msa0846870:CDS | 40.0% | |
| ! | GAACCGATTCATGGTTCAAT+CGG | - | chr5_4:27702173-27702192 | Msa0846870:intron | 40.0% |
| AAGCCGATTGAACCATGAAT+CGG | + | chr5_4:27702179-27702198 | None:intergenic | 40.0% | |
| ! | CAGTGTTTTCACAACCAATC+TGG | + | chr5_4:27702215-27702234 | None:intergenic | 40.0% |
| CTTCTAAGTCTCATGTCTGA+AGG | - | chr5_4:27702235-27702254 | Msa0846870:intron | 40.0% | |
| !! | CTTGTTACTATTGACTCCAG+TGG | - | chr5_4:27702317-27702336 | Msa0846870:intron | 40.0% |
| ATTGGACATGACATGACCAA+GGG | + | chr5_4:27702355-27702374 | None:intergenic | 40.0% | |
| ! | GTGAACATCTTTTGTCTGTC+TGG | - | chr5_4:27702487-27702506 | Msa0846870:intron | 40.0% |
| ! | AACTAGTTTACCCTAAGACC+GGG | + | chr5_4:27702521-27702540 | None:intergenic | 40.0% |
| ! | AGCATGGTTTAGAGTGAATG+AGG | - | chr5_4:27702640-27702659 | Msa0846870:CDS | 40.0% |
| AAAGATAGCCATAGAGACAG+TGG | + | chr5_4:27702839-27702858 | None:intergenic | 40.0% | |
| TTCACTCTTAGGTGTATCGA+TGG | - | chr5_4:27703066-27703085 | Msa0846870:intron | 40.0% | |
| GAACTGTCTTTCAATTGGAC+TGG | - | chr5_4:27703100-27703119 | Msa0846870:intron | 40.0% | |
| ATGAACTCACAAGAATTGCC+GGG | + | chr5_4:27703360-27703379 | None:intergenic | 40.0% | |
| !!! | GTTTGCGACTGATTTGGTTT+TGG | - | chr5_4:27703623-27703642 | Msa0846870:intron | 40.0% |
| ! | CTGTCTGATCTTTTCTGGAT+TGG | - | chr5_4:27703726-27703745 | Msa0846870:intron | 40.0% |
| !! | GCAGCTTGCTACTAATACTT+TGG | - | chr5_4:27703893-27703912 | Msa0846870:intron | 40.0% |
| TTTCCAACTGCATGTGTTAG+TGG | + | chr5_4:27703930-27703949 | None:intergenic | 40.0% | |
| GGATTCTCTATAGTGGTGTT+TGG | - | chr5_4:27703975-27703994 | Msa0846870:intron | 40.0% | |
| ATATCCACACAAACTGGCAT+TGG | - | chr5_4:27704256-27704275 | Msa0846870:CDS | 40.0% | |
| TCATGTTATTCCACTACCTG+TGG | - | chr5_4:27704629-27704648 | Msa0846870:CDS | 40.0% | |
| TGAGGCTAAGGATTCAAGCT+TGG | - | chr5_4:27701042-27701061 | Msa0846870:three_prime_UTR | 45.0% | |
| !! | AAGCTTGGTGTTCTCTCCAT+TGG | - | chr5_4:27701057-27701076 | Msa0846870:three_prime_UTR | 45.0% |
| CGTTGGGAGTAAGACAAAGA+AGG | - | chr5_4:27701086-27701105 | Msa0846870:three_prime_UTR | 45.0% | |
| ATCATCAGCATCTGCTGCTA+AGG | + | chr5_4:27701128-27701147 | None:intergenic | 45.0% | |
| TTAGCAGCAGATGCTGATGA+TGG | - | chr5_4:27701127-27701146 | Msa0846870:three_prime_UTR | 45.0% | |
| GGATTGGACAGACCTGTAAT+TGG | + | chr5_4:27701413-27701432 | None:intergenic | 45.0% | |
| GAGAATCGGAATCCCAAATG+AGG | - | chr5_4:27701578-27701597 | Msa0846870:intron | 45.0% | |
| CTGTTGTACATCTCCTAGTG+GGG | - | chr5_4:27701886-27701905 | Msa0846870:intron | 45.0% | |
| TGTTGTACATCTCCTAGTGG+GGG | - | chr5_4:27701887-27701906 | Msa0846870:intron | 45.0% | |
| !!! | TGCCTTTTTAGCTGGGGTTT+AGG | - | chr5_4:27701918-27701937 | Msa0846870:intron | 45.0% |
| GTATAACTCACTGCACGCTT+TGG | + | chr5_4:27701948-27701967 | None:intergenic | 45.0% | |
| CTTAAAACCGGACTGAACTG+CGG | + | chr5_4:27702146-27702165 | None:intergenic | 45.0% | |
| !! | GCAGTTCAGTCCGGTTTTAA+GGG | - | chr5_4:27702145-27702164 | Msa0846870:intron | 45.0% |
| GGTTCTCAGTCCCTTAAAAC+CGG | + | chr5_4:27702158-27702177 | None:intergenic | 45.0% | |
| !! | TGCTGGTTCCTAATCCAGAT+TGG | - | chr5_4:27702198-27702217 | Msa0846870:intron | 45.0% |
| CATTGGACATGACATGACCA+AGG | + | chr5_4:27702356-27702375 | None:intergenic | 45.0% | |
| ! | ACTAGTTTACCCTAAGACCG+GGG | + | chr5_4:27702520-27702539 | None:intergenic | 45.0% |
| ATTCGGTCCGGTTGAAATAG+AGG | - | chr5_4:27702607-27702626 | Msa0846870:CDS | 45.0% | |
| TTCGGTCCGGTTGAAATAGA+GGG | - | chr5_4:27702608-27702627 | Msa0846870:CDS | 45.0% | |
| TCAGCTTCTCAGTTCGTCTT+AGG | - | chr5_4:27702803-27702822 | Msa0846870:intron | 45.0% | |
| AATTGCCGGGGGAATACAAA+AGG | + | chr5_4:27703347-27703366 | None:intergenic | 45.0% | |
| TGAACTCACAAGAATTGCCG+GGG | + | chr5_4:27703359-27703378 | None:intergenic | 45.0% | |
| TCGTCAGTTTGCGACTGATT+TGG | - | chr5_4:27703617-27703636 | Msa0846870:intron | 45.0% | |
| AGTACCAATGCCAGTTTGTG+TGG | + | chr5_4:27704263-27704282 | None:intergenic | 45.0% | |
| GGTACTGCTATTGCAATTGC+TGG | - | chr5_4:27704277-27704296 | Msa0846870:CDS | 45.0% | |
| CTGCAGCCCTTACATCTTAA+CGG | - | chr5_4:27704454-27704473 | Msa0846870:intron | 45.0% | |
| GAGCGTCCGTTAAGATGTAA+GGG | + | chr5_4:27704463-27704482 | None:intergenic | 45.0% | |
| ! | AGAGCGTCCGTTAAGATGTA+AGG | + | chr5_4:27704464-27704483 | None:intergenic | 45.0% |
| ! | TGGTGCTAGCAACTTATGCT+TGG | + | chr5_4:27704698-27704717 | None:intergenic | 45.0% |
| GATGCAGGTAAGAGATACAG+AGG | + | chr5_4:27704785-27704804 | None:intergenic | 45.0% | |
| GGTGTTCTCTCCATTGGTGA+AGG | - | chr5_4:27701063-27701082 | Msa0846870:three_prime_UTR | 50.0% | |
| !! | TCTCCATTGGTGAAGGCGTT+GGG | - | chr5_4:27701070-27701089 | Msa0846870:three_prime_UTR | 50.0% |
| GGCCTAAACCCCAGCTAAAA+AGG | + | chr5_4:27701923-27701942 | None:intergenic | 50.0% | |
| AACTCACTGCACGCTTTGGT+AGG | + | chr5_4:27701944-27701963 | None:intergenic | 50.0% | |
| GGATAAGGTTCAACTGGTCC+AGG | - | chr5_4:27702038-27702057 | Msa0846870:CDS | 50.0% | |
| TGGTCCAGGCAGTTGAATCA+CGG | - | chr5_4:27702052-27702071 | Msa0846870:CDS | 50.0% | |
| TCAACCGTGATTCAACTGCC+TGG | + | chr5_4:27702059-27702078 | None:intergenic | 50.0% | |
| ! | CGCAGTTCAGTCCGGTTTTA+AGG | - | chr5_4:27702144-27702163 | Msa0846870:intron | 50.0% |
| ! | AGGGACTGAGAACCGATTCA+TGG | - | chr5_4:27702164-27702183 | Msa0846870:intron | 50.0% |
| !! | TCATGGTTCAATCGGCTTGC+TGG | - | chr5_4:27702181-27702200 | Msa0846870:intron | 50.0% |
| AGGGCATGACAAAATGCCAC+TGG | + | chr5_4:27702336-27702355 | None:intergenic | 50.0% | |
| ! | GTGGCATTTTGTCATGCCCT+TGG | - | chr5_4:27702336-27702355 | Msa0846870:intron | 50.0% |
| TCGGTCCGGTTGAAATAGAG+GGG | - | chr5_4:27702609-27702628 | Msa0846870:CDS | 50.0% | |
| TCCGGTTGAAATAGAGGGGA+GGG | - | chr5_4:27702613-27702632 | Msa0846870:CDS | 50.0% | |
| TCCCTCCCCTCTATTTCAAC+CGG | + | chr5_4:27702617-27702636 | None:intergenic | 50.0% | |
| TAGAGGGGAGGGATTTAGCA+TGG | - | chr5_4:27702624-27702643 | Msa0846870:CDS | 50.0% | |
| GAACTCACAAGAATTGCCGG+GGG | + | chr5_4:27703358-27703377 | None:intergenic | 50.0% | |
| GATTGAAGGACCCCAACTGA+TGG | - | chr5_4:27703656-27703675 | Msa0846870:intron | 50.0% | |
| GGACCCCAACTGATGGAATT+TGG | - | chr5_4:27703663-27703682 | Msa0846870:intron | 50.0% | |
| ! | GCTGCAGCAGCTTTCTGAAA+TGG | + | chr5_4:27704441-27704460 | None:intergenic | 50.0% |
| ! | CTCTCCATTGGTGAAGGCGT+TGG | - | chr5_4:27701069-27701088 | Msa0846870:three_prime_UTR | 55.0% |
| ACTCCCAACGCCTTCACCAA+TGG | + | chr5_4:27701076-27701095 | None:intergenic | 55.0% | |
| GCTGCTAAGGCTGCAACAAC+TGG | + | chr5_4:27701115-27701134 | None:intergenic | 55.0% | |
| TGTACATCTCCTAGTGGGGG+TGG | - | chr5_4:27701890-27701909 | Msa0846870:intron | 55.0% | |
| GGTTGAACCGCAGTTCAGTC+CGG | - | chr5_4:27702136-27702155 | Msa0846870:intron | 55.0% | |
| GTCTGTCTGGTTGCATTCCC+CGG | - | chr5_4:27702500-27702519 | Msa0846870:intron | 55.0% | |
| TGGTTGCATTCCCCGGTCTT+AGG | - | chr5_4:27702507-27702526 | Msa0846870:intron | 55.0% | |
| GGTTGCATTCCCCGGTCTTA+GGG | - | chr5_4:27702508-27702527 | Msa0846870:intron | 55.0% | |
| GTCCGGTTGAAATAGAGGGG+AGG | - | chr5_4:27702612-27702631 | Msa0846870:CDS | 55.0% | |
| ! | GCTCGCCTTTTGTATTCCCC+CGG | - | chr5_4:27703339-27703358 | Msa0846870:CDS | 55.0% |
| GCGCCACTAACACATGCAGT+TGG | - | chr5_4:27703924-27703943 | Msa0846870:intron | 55.0% | |
| GGCAATACACCACCCCCACT+AGG | + | chr5_4:27701902-27701921 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 27700920 | 27704820 | 27700920 | ID=Msa0846870;Name=Msa0846870 |
| chr5_4 | mRNA | 27700920 | 27704820 | 27700920 | ID=Msa0846870-mRNA-1;Parent=Msa0846870;Name=Msa0846870-mRNA-1;_AED=0.15;_eAED=0.15;_QI=0|0.6|0.54|1|1|1|11|347|384 |
| chr5_4 | exon | 27700920 | 27701293 | 27700920 | ID=Msa0846870-mRNA-1:exon:10660;Parent=Msa0846870-mRNA-1 |
| chr5_4 | exon | 27701392 | 27701492 | 27701392 | ID=Msa0846870-mRNA-1:exon:10659;Parent=Msa0846870-mRNA-1 |
| chr5_4 | exon | 27701744 | 27701843 | 27701744 | ID=Msa0846870-mRNA-1:exon:10658;Parent=Msa0846870-mRNA-1 |
| chr5_4 | exon | 27701967 | 27702083 | 27701967 | ID=Msa0846870-mRNA-1:exon:10657;Parent=Msa0846870-mRNA-1 |
| chr5_4 | exon | 27702371 | 27702448 | 27702371 | ID=Msa0846870-mRNA-1:exon:10656;Parent=Msa0846870-mRNA-1 |
| chr5_4 | exon | 27702551 | 27702663 | 27702551 | ID=Msa0846870-mRNA-1:exon:10655;Parent=Msa0846870-mRNA-1 |
| chr5_4 | exon | 27702865 | 27702960 | 27702865 | ID=Msa0846870-mRNA-1:exon:10654;Parent=Msa0846870-mRNA-1 |
| chr5_4 | exon | 27703320 | 27703440 | 27703320 | ID=Msa0846870-mRNA-1:exon:10653;Parent=Msa0846870-mRNA-1 |
| chr5_4 | exon | 27703784 | 27703862 | 27703784 | ID=Msa0846870-mRNA-1:exon:10652;Parent=Msa0846870-mRNA-1 |
| chr5_4 | exon | 27704249 | 27704320 | 27704249 | ID=Msa0846870-mRNA-1:exon:10651;Parent=Msa0846870-mRNA-1 |
| chr5_4 | exon | 27704570 | 27704820 | 27704570 | ID=Msa0846870-mRNA-1:exon:10650;Parent=Msa0846870-mRNA-1 |
| chr5_4 | CDS | 27704570 | 27704820 | 27704570 | ID=Msa0846870-mRNA-1:cds;Parent=Msa0846870-mRNA-1 |
| chr5_4 | CDS | 27704249 | 27704320 | 27704249 | ID=Msa0846870-mRNA-1:cds;Parent=Msa0846870-mRNA-1 |
| chr5_4 | CDS | 27703784 | 27703862 | 27703784 | ID=Msa0846870-mRNA-1:cds;Parent=Msa0846870-mRNA-1 |
| chr5_4 | CDS | 27703320 | 27703440 | 27703320 | ID=Msa0846870-mRNA-1:cds;Parent=Msa0846870-mRNA-1 |
| chr5_4 | CDS | 27702865 | 27702960 | 27702865 | ID=Msa0846870-mRNA-1:cds;Parent=Msa0846870-mRNA-1 |
| chr5_4 | CDS | 27702551 | 27702663 | 27702551 | ID=Msa0846870-mRNA-1:cds;Parent=Msa0846870-mRNA-1 |
| chr5_4 | CDS | 27702371 | 27702448 | 27702371 | ID=Msa0846870-mRNA-1:cds;Parent=Msa0846870-mRNA-1 |
| chr5_4 | CDS | 27701967 | 27702083 | 27701967 | ID=Msa0846870-mRNA-1:cds;Parent=Msa0846870-mRNA-1 |
| chr5_4 | CDS | 27701744 | 27701843 | 27701744 | ID=Msa0846870-mRNA-1:cds;Parent=Msa0846870-mRNA-1 |
| chr5_4 | CDS | 27701392 | 27701492 | 27701392 | ID=Msa0846870-mRNA-1:cds;Parent=Msa0846870-mRNA-1 |
| chr5_4 | CDS | 27701267 | 27701293 | 27701267 | ID=Msa0846870-mRNA-1:cds;Parent=Msa0846870-mRNA-1 |
| chr5_4 | three_prime_UTR | 27700920 | 27701266 | 27700920 | ID=Msa0846870-mRNA-1:three_prime_utr;Parent=Msa0846870-mRNA-1 |
| Gene Sequence |
| Protein sequence |
