AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0772240

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0772240 MtrunA17_Chr5g0409771 93.333 555 37 0 1 555 1 555 0.0 1057
Msa0772240 MtrunA17_Chr4g0039791 80.108 558 107 2 2 555 4 561 0.0 894
Msa0772240 MtrunA17_Chr5g0409791 79.401 568 104 2 1 555 1 568 0.0 886
Msa0772240 MtrunA17_Chr1g0157401 44.607 547 290 5 18 555 18 560 1.47e-156 459
Msa0772240 MtrunA17_Chr8g0353341 44.340 530 275 8 5 518 1 526 4.71e-145 429
Msa0772240 MtrunA17_Chr1g0197391 44.485 544 278 10 18 547 25 558 1.30e-143 426
Msa0772240 MtrunA17_Chr4g0028411 42.301 539 294 9 18 547 4 534 2.08e-139 414
Msa0772240 MtrunA17_Chr2g0327341 40.520 538 305 7 25 555 10 539 2.14e-136 406
Msa0772240 MtrunA17_Chr3g0116271 41.734 496 271 7 58 547 67 550 5.40e-129 388
Msa0772240 MtrunA17_Chr1g0180551 39.162 549 303 10 20 547 75 613 5.66e-127 385
Msa0772240 MtrunA17_Chr1g0180541 38.899 545 310 8 18 547 4 540 3.45e-126 380
Msa0772240 MtrunA17_Chr3g0116251 41.176 493 275 6 58 547 68 548 6.83e-126 380
Msa0772240 MtrunA17_Chr1g0186071 39.147 516 289 9 42 549 52 550 4.17e-109 337
Msa0772240 MtrunA17_Chr4g0072561 39.400 500 285 10 58 547 49 540 7.58e-109 336
Msa0772240 MtrunA17_Chr4g0000461 40.566 530 291 13 30 548 19 535 2.35e-103 322
Msa0772240 MtrunA17_Chr5g0395431 38.462 507 293 7 58 553 87 585 2.21e-101 318
Msa0772240 MtrunA17_Chr3g0102411 34.495 545 325 8 26 555 14 541 1.04e-100 315
Msa0772240 MtrunA17_Chr2g0334131 46.619 281 145 4 275 551 1 280 8.04e-74 236
Msa0772240 MtrunA17_Chr1g0157431 38.576 337 194 5 18 345 18 350 7.69e-64 218
Msa0772240 MtrunA17_Chr6g0471921 30.533 488 315 12 68 545 32 505 3.72e-52 186
Msa0772240 MtrunA17_Chr5g0433241 28.435 524 316 17 66 549 38 542 9.03e-44 164
Msa0772240 MtrunA17_Chr5g0433231 28.871 381 219 12 196 548 186 542 5.12e-36 141
Msa0772240 MtrunA17_Chr5g0396311 28.713 505 325 15 69 549 41 534 4.29e-35 139
Msa0772240 MtrunA17_Chr2g0292471 26.277 548 320 15 71 555 31 557 7.07e-35 138
Msa0772240 MtrunA17_Chr3g0109731 26.186 527 332 17 64 548 36 547 1.14e-34 138
Msa0772240 MtrunA17_Chr2g0301671 29.730 370 233 12 196 548 193 552 1.22e-33 134
Msa0772240 MtrunA17_Chr5g0396331 27.220 518 312 18 69 548 41 531 1.99e-33 134
Msa0772240 MtrunA17_Chr6g0471311 27.926 376 229 12 196 548 188 544 3.63e-33 133
Msa0772240 MtrunA17_Chr8g0370701 27.647 510 304 20 80 549 94 578 8.31e-33 132
Msa0772240 MtrunA17_Chr4g0068151 25.430 523 330 16 69 548 47 552 3.09e-32 130
Msa0772240 MtrunA17_Chr5g0433221 27.822 381 223 13 196 548 186 542 5.06e-31 127
Msa0772240 MtrunA17_Chr8g0370731 29.491 373 222 13 198 549 137 489 2.84e-30 124
Msa0772240 MtrunA17_Chr4g0028451 48.598 107 46 1 413 519 10 107 5.41e-28 108
Msa0772240 MtrunA17_Chr5g0406681 26.692 517 325 19 69 553 73 567 1.15e-27 117
Msa0772240 MtrunA17_Chr7g0252691 24.329 596 383 19 6 555 154 727 1.28e-27 117
Msa0772240 MtrunA17_Chr4g0004101 27.165 254 172 5 308 554 83 330 2.84e-23 100
Msa0772240 MtrunA17_Chr1g0205711 25.239 523 307 16 23 472 57 568 2.54e-22 101
Msa0772240 MtrunA17_Chr4g0004841 27.170 265 172 7 304 554 82 339 1.46e-21 96.3
Msa0772240 MtrunA17_Chr1g0160041 27.273 352 172 15 198 480 250 586 4.55e-21 97.4
Msa0772240 MtrunA17_Chr3g0124631 25.205 488 275 17 68 475 106 583 1.30e-19 92.8
Msa0772240 MtrunA17_Chr7g0270221 24.852 507 290 18 37 484 36 510 1.23e-18 89.7
Msa0772240 MtrunA17_Chr8g0388081 25.879 398 217 14 140 484 118 490 2.80e-18 88.2
Msa0772240 MtrunA17_Chr1g0194371 22.937 606 365 20 26 551 24 607 6.34e-18 87.4
Msa0772240 MtrunA17_Chr8g0377991 30.631 222 132 7 324 532 459 671 2.33e-16 82.4
Msa0772240 MtrunA17_Chr2g0329161 26.131 398 234 17 198 544 671 1059 2.74e-16 82.8
Msa0772240 MtrunA17_Chr4g0033141 25.436 401 234 17 197 544 674 1062 4.88e-16 82.0
Msa0772240 MtrunA17_Chr2g0334121 32.934 167 102 4 58 216 44 208 2.30e-15 75.1
Msa0772240 MtrunA17_Chr3g0121951 31.222 221 121 7 296 495 418 628 1.52e-14 76.6
Msa0772240 MtrunA17_Chr3g0121931 31.313 198 113 7 315 495 441 632 1.44e-13 73.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0772240 AT4G19010.1 58.867 547 220 3 10 551 12 558 0.0 652
Msa0772240 AT1G20510.1 43.993 541 290 5 13 547 3 536 2.55e-161 471
Msa0772240 AT1G20480.1 43.038 553 296 6 14 555 21 565 5.79e-152 447
Msa0772240 AT1G20500.1 42.413 547 296 7 18 555 14 550 1.38e-146 433
Msa0772240 AT4G05160.1 40.516 543 307 6 23 555 8 544 3.37e-139 414
Msa0772240 AT5G38120.1 41.410 553 294 10 12 547 3 542 3.02e-136 407
Msa0772240 AT5G63380.1 40.437 549 303 7 14 547 11 550 4.52e-136 407
Msa0772240 AT1G20510.2 42.647 476 260 5 13 482 3 471 6.51e-134 398
Msa0772240 AT1G20510.3 41.667 456 253 5 13 462 3 451 5.16e-123 370
Msa0772240 AT5G38120.3 40.381 525 283 10 12 519 3 514 2.06e-122 370
Msa0772240 AT3G21240.1 40.561 535 299 10 30 555 30 554 5.70e-113 347
Msa0772240 AT1G65060.1 41.331 496 282 7 58 548 66 557 1.97e-110 341
Msa0772240 AT1G51680.1 42.633 509 278 8 58 555 56 561 1.99e-110 341
Msa0772240 AT5G38120.4 39.959 488 263 10 12 482 3 477 2.59e-110 338
Msa0772240 AT5G38120.2 39.959 488 263 10 12 482 3 477 2.59e-110 338
Msa0772240 AT3G21230.1 39.279 527 304 9 40 553 43 566 5.93e-105 327
Msa0772240 AT1G62940.1 38.218 505 287 8 57 549 43 534 5.39e-99 310
Msa0772240 AT1G51680.3 42.283 473 259 8 58 519 56 525 3.78e-98 308
Msa0772240 AT3G21230.3 38.945 493 285 9 40 519 43 532 2.76e-93 296
Msa0772240 AT1G20490.2 37.972 424 244 7 18 431 14 428 9.55e-89 281
Msa0772240 AT1G20490.1 37.972 424 244 7 18 431 14 428 9.55e-89 281
Msa0772240 AT3G21240.2 39.009 464 264 10 30 484 30 483 2.74e-87 278
Msa0772240 AT3G21240.3 39.009 464 264 10 30 484 30 483 2.74e-87 278
Msa0772240 AT1G51680.2 40.639 438 246 8 58 484 56 490 2.84e-84 271
Msa0772240 AT3G21230.2 37.939 456 267 9 40 482 43 495 6.96e-81 262
Msa0772240 AT1G65060.2 39.078 412 242 7 58 464 66 473 8.45e-78 254
Msa0772240 AT3G48990.1 29.158 487 325 12 67 545 30 504 1.98e-48 176
Msa0772240 AT3G21230.4 33.333 387 242 9 40 413 43 426 2.92e-45 166
Msa0772240 AT1G77240.1 33.777 376 219 14 195 552 182 545 1.20e-41 157
Msa0772240 AT1G21530.2 27.190 548 337 21 41 549 19 543 2.29e-40 154
Msa0772240 AT1G21530.1 27.106 546 338 21 41 549 19 541 4.30e-39 150
Msa0772240 AT5G16370.1 27.237 503 317 14 80 549 53 539 5.45e-39 150
Msa0772240 AT1G21540.1 27.419 558 333 23 41 552 19 550 1.11e-38 149
Msa0772240 AT1G30520.2 27.841 528 304 17 77 549 42 547 1.14e-38 149
Msa0772240 AT1G30520.1 27.841 528 304 17 77 549 42 547 1.14e-38 149
Msa0772240 AT1G65890.1 26.316 532 325 18 66 549 38 550 6.76e-38 147
Msa0772240 AT1G65880.1 26.996 526 330 17 66 549 38 551 1.29e-36 144
Msa0772240 AT1G66120.1 27.238 525 322 18 66 549 38 543 1.48e-34 138
Msa0772240 AT5G16340.1 27.273 506 313 19 80 549 53 539 2.23e-34 137
Msa0772240 AT1G75960.1 30.189 371 226 13 196 548 183 538 3.69e-34 136
Msa0772240 AT3G16910.1 28.756 386 248 11 181 549 181 556 2.35e-32 131
Msa0772240 AT1G20560.1 27.470 506 312 16 80 549 54 540 1.65e-31 129
Msa0772240 AT1G20560.2 30.707 368 224 12 198 549 110 462 1.23e-30 125
Msa0772240 AT1G76290.1 27.146 501 314 17 80 549 52 532 1.54e-30 125
Msa0772240 AT3G16170.1 24.846 487 299 16 109 554 147 607 1.56e-30 126
Msa0772240 AT5G36880.6 25.142 529 350 13 67 555 147 669 3.72e-30 125
Msa0772240 AT5G36880.3 25.142 529 350 13 67 555 147 669 3.72e-30 125
Msa0772240 AT5G36880.5 25.142 529 350 13 67 555 147 669 3.72e-30 125
Msa0772240 AT5G36880.1 25.142 529 350 13 67 555 147 669 3.72e-30 125
Msa0772240 AT1G30520.3 26.531 441 270 14 77 482 42 463 4.28e-30 124
Msa0772240 AT1G30520.4 26.531 441 270 14 77 482 42 463 4.28e-30 124
Msa0772240 AT5G36880.2 25.142 529 350 13 67 555 197 719 4.50e-30 125
Msa0772240 AT2G17650.1 27.793 367 241 11 196 549 240 595 9.33e-28 118
Msa0772240 AT5G27600.1 26.996 526 290 17 23 470 60 569 8.35e-26 112
Msa0772240 AT1G68270.1 24.340 530 306 19 66 548 38 519 1.21e-25 111
Msa0772240 AT5G36880.4 25.380 461 297 14 67 488 147 599 2.51e-23 104
Msa0772240 AT1G49430.1 25.617 527 301 22 36 484 40 553 5.38e-23 103
Msa0772240 AT1G64400.1 24.565 517 295 19 21 456 21 523 4.39e-22 100
Msa0772240 AT1G77590.1 24.180 488 287 15 68 482 107 584 3.75e-20 94.7
Msa0772240 AT3G05970.1 24.717 530 291 16 26 470 63 569 1.06e-19 93.6
Msa0772240 AT1G77590.2 26.513 347 185 12 198 482 100 438 5.52e-19 90.9
Msa0772240 AT3G23790.1 29.651 172 103 5 335 493 465 631 3.42e-12 69.7
Msa0772240 AT2G47240.4 31.548 168 109 5 320 484 326 490 1.76e-11 67.4
Msa0772240 AT2G47240.1 31.548 168 109 5 320 484 385 549 1.95e-11 67.4
Msa0772240 AT2G47240.2 31.548 168 109 5 320 484 385 549 1.95e-11 67.4
Msa0772240 AT2G47240.3 31.548 168 109 5 320 484 385 549 1.95e-11 67.4

Find 159 sgRNAs with CRISPR-Local

Find 578 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCTTCTGGTCTTCATAAAA+TGG 0.204210 5_2:-46551015 Msa0772240:CDS
ATGGGATAGTAAATTGAATT+TGG 0.204514 5_2:+46550957 None:intergenic
TTGACATTGATGAGACTATT+AGG 0.209216 5_2:-46550422 Msa0772240:CDS
TATCAAATACAAGGGCTTTC+AGG 0.229499 5_2:-46549517 Msa0772240:intron
TATTGCTATGGTTGAGCTTT+TGG 0.241203 5_2:-46550589 Msa0772240:CDS
TACTATCCCATTGTACTATT+AGG 0.254485 5_2:-46550945 Msa0772240:CDS
CTTAGGATACTTGAATAATA+AGG 0.261353 5_2:-46549646 Msa0772240:intron
GCGAATTCTCACGCAAATTT+CGG 0.271813 5_2:-46551346 Msa0772240:five_prime_UTR
TTGCCGATGTTCCATTTATA+TGG 0.273927 5_2:-46550507 Msa0772240:CDS
TTTATTGATTTATGAATAAC+AGG 0.277014 5_2:-46548689 Msa0772240:three_prime_UTR
TTCTTCCTGCATTGCTTCCC+TGG 0.280557 5_2:-46551551 Msa0772240:five_prime_UTR
ATAGTGGATGTCGCCGTTAC+AGG 0.280831 5_2:-46549331 Msa0772240:CDS
ATGCATCATGAGTGATATTA+AGG 0.296838 5_2:-46548793 Msa0772240:three_prime_UTR
AGAGAGATAAACCATATAAA+TGG 0.302429 5_2:+46550496 None:intergenic
ACCTGTATAAAATCAACATT+AGG 0.307157 5_2:+46550228 None:intergenic
GCCCTTATTGATTCCTCATC+TGG 0.313200 5_2:-46551083 Msa0772240:CDS
ATACCATCACTCACCCTTCT+TGG 0.316236 5_2:-46551220 Msa0772240:CDS
GCGAAGGCAAAGGGTGTAAA+TGG 0.324668 5_2:-46550336 Msa0772240:CDS
GGGTTATCATAGCATGAAAT+TGG 0.334584 5_2:-46548838 Msa0772240:three_prime_UTR
GTGATTTAACTTGAAATTCA+TGG 0.336236 5_2:-46542939 Msa0772240:three_prime_UTR
TTAGTCAAATCAATGGCTTC+TGG 0.343881 5_2:-46551029 Msa0772240:CDS
GAAATGCCTTAGAGTTTAGA+AGG 0.348615 5_2:+46548903 None:intergenic
AGCAGTTTCTGAGTTGCTTT+CGG 0.356180 5_2:+46548928 None:intergenic
TGCTACGGGATTATTGTCAT+TGG 0.367115 5_2:-46550472 Msa0772240:CDS
TTAACTTGAAATTCATGGTT+TGG 0.368006 5_2:-46542934 Msa0772240:three_prime_UTR
ACGGCGACATCCACTATTTC+AGG 0.369334 5_2:+46549337 None:intergenic
ATGACTGAGTCGGGTGCATT+AGG 0.374967 5_2:-46550077 Msa0772240:CDS
CTCCCCAGCTTCTTCATCCT+TGG 0.375919 5_2:+46549217 None:intergenic
CAGGCAGAAGTGGTGAGCTT+TGG 0.376467 5_2:-46549944 Msa0772240:CDS
ACTTTGCGAACCTTCTTGAA+TGG 0.377094 5_2:+46548996 None:intergenic
TGACATTGATGAGACTATTA+GGG 0.379738 5_2:-46550421 Msa0772240:CDS
TTCCAGATGAGGAATCAATA+AGG 0.379840 5_2:+46551081 None:intergenic
TGCTTGCCTTCTAAACTCTA+AGG 0.391570 5_2:-46548909 Msa0772240:exon
GGAGATTCCAGTGGCATTTG+TGG 0.394931 5_2:-46549198 Msa0772240:CDS
ACAAAATCCAGAAGAAAATC+TGG 0.396724 5_2:-46543196 Msa0772240:three_prime_UTR
AACCCCACTATGCATGTCTT+TGG 0.402525 5_2:+46548856 None:intergenic
TTCTGAAGATGATGATATAA+AGG 0.402702 5_2:+46551428 None:intergenic
GTGTATACTATTGTAAATTC+CGG 0.412626 5_2:+46551184 None:intergenic
AGAAGAAAATCTGGCATGTA+TGG 0.412691 5_2:-46543187 Msa0772240:three_prime_UTR
GCTACGGGATTATTGTCATT+GGG 0.419178 5_2:-46550471 Msa0772240:CDS
ACAAAATCGATAACATCCTT+TGG 0.419496 5_2:+46549149 None:intergenic
AACGATACAACATCGAGAAA+AGG 0.426403 5_2:+46551137 None:intergenic
AAACAAAGTTACCAGAAATC+AGG 0.431755 5_2:+46550715 None:intergenic
TAACAACTTTGAGTAAGAAA+TGG 0.436153 5_2:+46551055 None:intergenic
TGGAGGCAAAAGTGGTAGAT+TGG 0.438591 5_2:-46549989 Msa0772240:CDS
TTGGTTGAATGTGATTGTTT+TGG 0.441532 5_2:-46548819 Msa0772240:three_prime_UTR
AAAGATGGTTGGCTACATAC+TGG 0.442873 5_2:-46549600 Msa0772240:CDS
GCTGTCAATGCCGACAATAT+CGG 0.443469 5_2:+46550357 None:intergenic
GAAGCCATTGATTTGACTAA+AGG 0.445775 5_2:+46551032 None:intergenic
TACGCGGATGTTCCGCGAAT+CGG 0.445922 5_2:-46551315 Msa0772240:five_prime_UTR
CAAAGCTCACCACTTCTGCC+TGG 0.447396 5_2:+46549945 None:intergenic
TTTCGCAACTATTCCTCACT+AGG 0.455586 5_2:-46550029 Msa0772240:CDS
TCTTGTTCCACCGATATTGT+CGG 0.455719 5_2:-46550367 Msa0772240:CDS
TTGCAATGCACTTTGCTACA+TGG 0.456594 5_2:+46551617 None:intergenic
GTTACCTTTAGTCAAATCAA+TGG 0.458910 5_2:-46551036 Msa0772240:CDS
AAAGCTCACCACTTCTGCCT+GGG 0.459009 5_2:+46549946 None:intergenic
TTCAGAAAAGTGAATGGCAC+TGG 0.461490 5_2:+46551282 None:intergenic
ACTAGAAGCTTACAAAATCC+AGG 0.462213 5_2:+46551533 None:intergenic
CCTGTATAAAATCAACATTA+GGG 0.467794 5_2:+46550229 None:intergenic
TTCTGTGCCAGAAAATGAAA+AGG 0.468038 5_2:-46550772 Msa0772240:CDS
CAGTTGATAATGCAGTTTAG+AGG 0.468447 5_2:+46551466 None:intergenic
AGAAGAAAATATGTCCTGTA+TGG 0.469327 5_2:-46548648 Msa0772240:intron
GCTTCTGGTCTTCATAAAAT+GGG 0.474868 5_2:-46551014 Msa0772240:CDS
AATCAACATTAGGGAGAGCT+TGG 0.474883 5_2:+46550238 None:intergenic
GGTTTATCTCTCTATGCTAC+GGG 0.475242 5_2:-46550486 Msa0772240:CDS
TCTAGGATCTCTTACCATAC+AGG 0.477046 5_2:+46548634 None:intergenic
ATAACACCTAATAGTACAAT+GGG 0.478275 5_2:+46550939 None:intergenic
TCCAGATGAGGAATCAATAA+GGG 0.481082 5_2:+46551082 None:intergenic
AAAATCCAGGGAAGCAATGC+AGG 0.484384 5_2:+46551546 None:intergenic
TCATAGAAATCTTATTGCTA+TGG 0.487900 5_2:-46550601 Msa0772240:CDS
ATTTCATCAACACTACTAAG+AGG 0.496577 5_2:+46550885 None:intergenic
GAAAGAATTTATCAAATACA+AGG 0.497893 5_2:-46549526 Msa0772240:CDS
TGGTTTATCTCTCTATGCTA+CGG 0.498187 5_2:-46550487 Msa0772240:CDS
GGGTCGGTCGGAAGGCTCCT+AGG 0.498932 5_2:+46551158 None:intergenic
CACAGACCTTGGAATCTTGT+CGG 0.500104 5_2:+46548965 None:intergenic
GCATTTGTGGTCAAGAAGGT+TGG 0.500367 5_2:-46549185 Msa0772240:CDS
TGTTGATGAAATTCGTAAGC+AGG 0.500410 5_2:-46550874 Msa0772240:CDS
TTCGCGGAACATCCGCGTAC+TGG 0.501790 5_2:+46551319 None:intergenic
ATCTTCCCAGTCACAGACCT+TGG 0.509926 5_2:+46548954 None:intergenic
TAAGTTGCAGAGTTTGAGAC+AGG 0.511530 5_2:-46550310 Msa0772240:CDS
ATTACCAAAGACATGCATAG+TGG 0.512071 5_2:-46548860 Msa0772240:three_prime_UTR
AGTGGCATTTGTGGTCAAGA+AGG 0.512122 5_2:-46549189 Msa0772240:CDS
AACACAGCTTCTAAATCAGC+AGG 0.514041 5_2:+46549370 None:intergenic
TTCTTGACCACAAATGCCAC+TGG 0.514670 5_2:+46549191 None:intergenic
GTTTATGGAATGACTGAGTC+GGG 0.516171 5_2:-46550086 Msa0772240:CDS
ACGATACAACATCGAGAAAA+GGG 0.518276 5_2:+46551138 None:intergenic
ATTCGCAATCACAAGCGTAC+CGG 0.518855 5_2:+46551363 None:intergenic
AAAGTGGTAGATTGGAATAG+TGG 0.520566 5_2:-46549981 Msa0772240:CDS
GGTTTATGGAATGACTGAGT+CGG 0.521041 5_2:-46550087 Msa0772240:CDS
GTGGTGAGCTTTGGTTGAGA+GGG 0.522929 5_2:-46549935 Msa0772240:CDS
AGTGCCAAGGATGAAGAAGC+TGG 0.523191 5_2:-46549221 Msa0772240:CDS
AAGATTCCAAGGTCTGTGAC+TGG 0.524838 5_2:-46548960 Msa0772240:CDS
TGGTTTAAGATTCATGGTGG+TGG 0.525255 5_2:-46542965 Msa0772240:three_prime_UTR
ATGTCGACAATTGATAAAGA+TGG 0.526979 5_2:-46549615 Msa0772240:CDS
CGAGAAAAGGGTCGGTCGGA+AGG 0.531124 5_2:+46551150 None:intergenic
ATATTAAATACCTATTGAAA+AGG 0.531883 5_2:+46543040 None:intergenic
TCCAAACATGGAGGCAAAAG+TGG 0.536470 5_2:-46549997 Msa0772240:CDS
ACAATAGTATACACTCTCCT+AGG 0.538812 5_2:-46551175 Msa0772240:CDS
TTACCAAAGACATGCATAGT+GGG 0.540493 5_2:-46548859 Msa0772240:three_prime_UTR
TTCGCAACTATTCCTCACTA+GGG 0.544004 5_2:-46550028 Msa0772240:CDS
AGTGGTGAGCTTTGGTTGAG+AGG 0.549036 5_2:-46549936 Msa0772240:CDS
AGTTGATAATGCAGTTTAGA+GGG 0.551390 5_2:+46551467 None:intergenic
TAGTGGATGTCGCCGTTACA+GGG 0.551826 5_2:-46549330 Msa0772240:intron
GCAGGTTGCGCCATTCAAGA+AGG 0.552672 5_2:-46549006 Msa0772240:intron
GTGCCAAGGATGAAGAAGCT+GGG 0.553492 5_2:-46549220 Msa0772240:CDS
CATAACACCTAATAGTACAA+TGG 0.557647 5_2:+46550938 None:intergenic
GGTTCGCGCGAACCGATTCG+CGG 0.558609 5_2:+46551303 None:intergenic
GCATTGACAGCGAAGGCAAA+GGG 0.561700 5_2:-46550345 Msa0772240:CDS
ACACTACTAAGAGGATTCAA+TGG 0.565007 5_2:+46550894 None:intergenic
GGCATTGACAGCGAAGGCAA+AGG 0.570107 5_2:-46550346 Msa0772240:CDS
ATTTGATAAATTCTTTCAAG+CGG 0.572308 5_2:+46549532 None:intergenic
AGAGGGCCTTCAATTATGAA+AGG 0.572900 5_2:-46549918 Msa0772240:intron
AAGCTCACCACTTCTGCCTG+GGG 0.573330 5_2:+46549947 None:intergenic
CGACAATTGATAAAGATGGT+TGG 0.573781 5_2:-46549611 Msa0772240:CDS
ATTTCTCTAGTGCACATACA+AGG 0.574419 5_2:+46543156 None:intergenic
GCTACATGGTTGTTGAAAGG+TGG 0.575599 5_2:+46551631 None:intergenic
AGATTCCAAGGTCTGTGACT+GGG 0.575854 5_2:-46548959 Msa0772240:CDS
TGCATTATCAACTGTAACAG+CGG 0.577419 5_2:-46551457 Msa0772240:five_prime_UTR
AAAGAATTTATCAAATACAA+GGG 0.580755 5_2:-46549525 Msa0772240:CDS
CATAAAATGGGAGTTTCACA+AGG 0.583635 5_2:-46551002 Msa0772240:CDS
CTATTAGGTGTTATGTACCT+AGG 0.587403 5_2:-46550930 Msa0772240:CDS
TTTGCTACATGGTTGTTGAA+AGG 0.589406 5_2:+46551628 None:intergenic
GGTACTACTGGTGTGAGCAA+AGG 0.591807 5_2:-46550636 Msa0772240:CDS
TTAAGATTCATGGTGGTGGA+TGG 0.596279 5_2:-46542961 Msa0772240:three_prime_UTR
AAACCATATAAATGGAACAT+CGG 0.598356 5_2:+46550504 None:intergenic
AGGGCTAAAACCCCATCATG+AGG 0.601023 5_2:+46551101 None:intergenic
TTCATATACTTACCCTGTAA+CGG 0.602675 5_2:+46549318 None:intergenic
TTGCAGAGTTTGAGACAGGT+CGG 0.607467 5_2:-46550306 Msa0772240:CDS
AGTTTCTGAGTTGCTTTCGG+AGG 0.613327 5_2:+46548931 None:intergenic
AGGGTTGTTAGCTCCAAACA+TGG 0.614345 5_2:-46550009 Msa0772240:CDS
CTAGAAGCTTACAAAATCCA+GGG 0.615237 5_2:+46551534 None:intergenic
TGGAAGTGTACTATCTCCAA+AGG 0.615514 5_2:-46549165 Msa0772240:CDS
ACATCGAGAAAAGGGTCGGT+CGG 0.618381 5_2:+46551146 None:intergenic
ATTCAAGAAGGTTCGCAAAG+TGG 0.619277 5_2:-46548994 Msa0772240:CDS
TGAAGATGATGATATAAAGG+AGG 0.623839 5_2:+46551431 None:intergenic
TGCCAAGGATGAAGAAGCTG+GGG 0.626607 5_2:-46549219 Msa0772240:CDS
ACATGAGAATCAAAGATAGA+CGG 0.628951 5_2:+46551676 None:intergenic
TCGGGTGCATTAGGAGCATG+CGG 0.630001 5_2:-46550068 Msa0772240:CDS
AGAAATGGAAGTTCCAGATG+AGG 0.636066 5_2:+46551070 None:intergenic
GTCAATGCCGACAATATCGG+TGG 0.636107 5_2:+46550360 None:intergenic
AGCTCACCACTTCTGCCTGG+GGG 0.642781 5_2:+46549948 None:intergenic
TGGAGCTAACAACCCTAGTG+AGG 0.644923 5_2:+46550016 None:intergenic
TCTTCACCGACAAGATTCCA+AGG 0.652098 5_2:-46548971 Msa0772240:CDS
GGGCTAAAACCCCATCATGA+GGG 0.653343 5_2:+46551102 None:intergenic
ATACCAAGAAGGGTGAGTGA+TGG 0.654569 5_2:+46551217 None:intergenic
CGTAAGCAGGTTAATGACTG+TGG 0.656452 5_2:-46550861 Msa0772240:CDS
TACAACATCGAGAAAAGGGT+CGG 0.661267 5_2:+46551142 None:intergenic
ATTGTCGGCATTGACAGCGA+AGG 0.665271 5_2:-46550352 Msa0772240:CDS
TACCAAAGACATGCATAGTG+GGG 0.673580 5_2:-46548858 Msa0772240:three_prime_UTR
ACAGCTTCTAAATCAGCAGG+AGG 0.675381 5_2:+46549373 None:intergenic
TTGGAAGTAGAAGCAAAACA+AGG 0.677547 5_2:+46550976 None:intergenic
TTATTGATTTATGAATAACA+GGG 0.688583 5_2:-46548688 Msa0772240:three_prime_UTR
GTTAAGAAATTAGAACCACT+AGG 0.699081 5_2:-46550807 Msa0772240:CDS
ATGGTGTAACAACAGCACCT+AGG 0.700872 5_2:+46550913 None:intergenic
TGAGAATCAAAGATAGACGG+TGG 0.703726 5_2:+46551679 None:intergenic
AGAAGCTGGGGAGATTCCAG+TGG 0.713242 5_2:-46549207 Msa0772240:CDS
GAAATAATAGGAATGCCTAG+TGG 0.714538 5_2:+46550792 None:intergenic
AATTTCGGCGAACCAGTACG+CGG 0.720761 5_2:-46551331 Msa0772240:five_prime_UTR
GTTGTTAGCTCCAAACATGG+AGG 0.741487 5_2:-46550006 Msa0772240:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATTAAGTTTAATTTTTGT+TGG - chr5_2:46546956-46546975 Msa0772240:intron 10.0%
!!! TTTTAGTAATAATAATGATA+AGG + chr5_2:46547134-46547153 None:intergenic 10.0%
!! CTTAATAATATTTAACAATT+TGG + chr5_2:46547675-46547694 None:intergenic 10.0%
!!! AAATGACAATATTTTAAAAA+CGG - chr5_2:46548147-46548166 Msa0772240:intron 10.0%
!! AAACAAAATTATTTAAATGA+TGG + chr5_2:46549942-46549961 None:intergenic 10.0%
!!! AATTTTTATAACTTACTATA+AGG + chr5_2:46551338-46551357 None:intergenic 10.0%
!! AAAAAATAGATCTAAAAACA+AGG + chr5_2:46543211-46543230 None:intergenic 15.0%
!!! TGTTTTTAGATCTATTTTTT+CGG - chr5_2:46543211-46543230 Msa0772240:intron 15.0%
!!! ATGTAAAATTGTTTCTTTTT+AGG - chr5_2:46544495-46544514 Msa0772240:intron 15.0%
!! GTTTGATTAATAATTTCAAT+TGG + chr5_2:46544923-46544942 None:intergenic 15.0%
!! AAAGAATTTATCAAATACAA+GGG - chr5_2:46545078-46545097 Msa0772240:intron 15.0%
!!! TTTATTGATTTATGAATAAC+AGG - chr5_2:46545914-46545933 Msa0772240:intron 15.0%
!!! TTATTGATTTATGAATAACA+GGG - chr5_2:46545915-46545934 Msa0772240:intron 15.0%
!! ATATTAAATACCTATTGAAA+AGG + chr5_2:46546092-46546111 None:intergenic 15.0%
!! TTAATTTAAACACACTAATA+TGG - chr5_2:46547068-46547087 Msa0772240:intron 15.0%
!!! TAAGGATTTAATTTATCTTT+TGG + chr5_2:46547116-46547135 None:intergenic 15.0%
!!! AATTCAAAAGTATATGTTTA+AGG - chr5_2:46547457-46547476 Msa0772240:intron 15.0%
!! ATAAAATATATCACAACATA+AGG - chr5_2:46547498-46547517 Msa0772240:intron 15.0%
!! ATATAAAGTTAGATAGATAT+AGG - chr5_2:46547953-46547972 Msa0772240:intron 15.0%
!! GAATATCAAGATAATAAATA+AGG - chr5_2:46548172-46548191 Msa0772240:intron 15.0%
!!! TTTATTTTATCATATCCTTT+TGG - chr5_2:46548288-46548307 Msa0772240:intron 15.0%
!! GTTTGATTAATAATTTCAAT+TGG + chr5_2:46544923-46544942 None:intergenic 15.0%
!! AAAGAATTTATCAAATACAA+GGG - chr5_2:46545078-46545097 Msa0772240:intron 15.0%
!! TTATATTTAAATGTCTAAAG+AGG + chr5_2:46550831-46550850 None:intergenic 15.0%
!! TTTAGTTATTTATGAATAAC+AGG - chr5_2:46551375-46551394 Msa0772240:five_prime_UTR 15.0%
!! TTAGTTATTTATGAATAACA+GGG - chr5_2:46551376-46551395 Msa0772240:five_prime_UTR 15.0%
!! ATATTAAATACCTATTGAAA+AGG + chr5_2:46546092-46546111 None:intergenic 15.0%
!!! TCTAATTTCTTAACATTTTC+AGG + chr5_2:46543790-46543809 None:intergenic 20.0%
!!! AATAAGACTATTTTATTCTG+AGG + chr5_2:46544406-46544425 None:intergenic 20.0%
!! AAACAACATTATTTGAATGA+TGG + chr5_2:46544449-46544468 None:intergenic 20.0%
!!! TGTTTTCCTAGATTTTTTTA+AGG - chr5_2:46544464-46544483 Msa0772240:intron 20.0%
!!! ATTGTTTCTTTTTAGGTTTA+TGG - chr5_2:46544502-46544521 Msa0772240:intron 20.0%
!!! TTTTTACCTTTCATAATTGA+AGG + chr5_2:46544694-46544713 None:intergenic 20.0%
!! TAAATACTAAAAGGATAACA+TGG - chr5_2:46544748-46544767 Msa0772240:intron 20.0%
!!! AACTTTTTCCTTAATTTCTT+AGG - chr5_2:46544940-46544959 Msa0772240:intron 20.0%
!!! ATTGTTTATTTTGATCAAGA+TGG - chr5_2:46545030-46545049 Msa0772240:intron 20.0%
!! ATTTGATAAATTCTTTCAAG+CGG + chr5_2:46545074-46545093 None:intergenic 20.0%
!! GAAAGAATTTATCAAATACA+AGG - chr5_2:46545077-46545096 Msa0772240:intron 20.0%
!! AAGCTTATATTTGTCTAAAA+AGG + chr5_2:46545336-46545355 None:intergenic 20.0%
!!! ATTTTAACCCTTTTTTTTCT+TGG - chr5_2:46545575-46545594 Msa0772240:intron 20.0%
!! TAGATCATTAATCATTTAGT+AGG - chr5_2:46546323-46546342 Msa0772240:intron 20.0%
!! AGATCATTAATCATTTAGTA+GGG - chr5_2:46546324-46546343 Msa0772240:intron 20.0%
!! TTAATCTTCATAGTTATATG+TGG - chr5_2:46546398-46546417 Msa0772240:intron 20.0%
!! GTAAGCAATTTATATTATGA+AGG - chr5_2:46546649-46546668 Msa0772240:intron 20.0%
!! AATTAACTTAAAGATTTCAG+TGG + chr5_2:46546761-46546780 None:intergenic 20.0%
!! GTTAATTATTCGTAACAAAT+TGG - chr5_2:46546774-46546793 Msa0772240:intron 20.0%
!! ATGATATAACATTGAATGAT+TGG + chr5_2:46547307-46547326 None:intergenic 20.0%
!!! TGAAACAAATTTTGTCTATA+CGG - chr5_2:46547377-46547396 Msa0772240:intron 20.0%
!!! CTACATATAAAGTTTAACTT+TGG - chr5_2:46547724-46547743 Msa0772240:intron 20.0%
!! ATAATCTGTTTGGAAATATT+TGG + chr5_2:46548578-46548597 None:intergenic 20.0%
!! AAATATTTCCAAACAGATTA+TGG - chr5_2:46548577-46548596 Msa0772240:intron 20.0%
!! AAATAAGAATGCTCTTATAA+AGG + chr5_2:46548755-46548774 None:intergenic 20.0%
!!! TCTAATTTCTTAACATTTTC+AGG + chr5_2:46543790-46543809 None:intergenic 20.0%
!!! CTGTAAAATTGTTTCTTTTT+AGG - chr5_2:46549987-46550006 Msa0772240:CDS 20.0%
!!! ATTGTTTCTTTTTAGGTTTA+TGG - chr5_2:46544502-46544521 Msa0772240:intron 20.0%
!!! TTTTTACCTTTCATAATTGA+AGG + chr5_2:46544694-46544713 None:intergenic 20.0%
!!! AACTTTTTCCTTAATTTCTT+AGG - chr5_2:46544940-46544959 Msa0772240:intron 20.0%
!!! ATTGTTTATTTTGATCAAGA+TGG - chr5_2:46545030-46545049 Msa0772240:intron 20.0%
!! ATTTGATAAATTCTTTCAAG+CGG + chr5_2:46545074-46545093 None:intergenic 20.0%
!! GAAAGAATTTATCAAATACA+AGG - chr5_2:46545077-46545096 Msa0772240:intron 20.0%
!!! AATTTTAACCCTTTTTTTCT+TGG - chr5_2:46551073-46551092 Msa0772240:CDS 20.0%
!!! ATATTTTGGTTTAAGATTCA+TGG - chr5_2:46551632-46551651 Msa0772240:five_prime_UTR 20.0%
!! TTCTGAAGATGATGATATAA+AGG + chr5_2:46543178-46543197 None:intergenic 25.0%
! ATCTAAAAACAAGGAAGAAA+AGG + chr5_2:46543202-46543221 None:intergenic 25.0%
!!! TCTATTTTTTCGGATTTTTC+CGG - chr5_2:46543221-46543240 Msa0772240:intron 25.0%
!! TTGATTTTCAGAAAAGTGAA+TGG + chr5_2:46543330-46543349 None:intergenic 25.0%
!!! TTCACTTTTCTGAAAATCAA+TGG - chr5_2:46543330-46543349 Msa0772240:intron 25.0%
! GTGTATACTATTGTAAATTC+CGG + chr5_2:46543422-46543441 None:intergenic 25.0%
! TAACAACTTTGAGTAAGAAA+TGG + chr5_2:46543551-46543570 None:intergenic 25.0%
! ATGGGATAGTAAATTGAATT+TGG + chr5_2:46543649-46543668 None:intergenic 25.0%
! ATAACACCTAATAGTACAAT+GGG + chr5_2:46543667-46543686 None:intergenic 25.0%
!!! TGTTTTTTTAACCTGATTTC+TGG - chr5_2:46543877-46543896 Msa0772240:intron 25.0%
!! TGTTTAATAACCAGATTTTG+AGG + chr5_2:46543916-46543935 None:intergenic 25.0%
! TCATAGAAATCTTATTGCTA+TGG - chr5_2:46544002-46544021 Msa0772240:intron 25.0%
! AAACCATATAAATGGAACAT+CGG + chr5_2:46544102-46544121 None:intergenic 25.0%
! AGAGAGATAAACCATATAAA+TGG + chr5_2:46544110-46544129 None:intergenic 25.0%
!! TTTATAGCTTTTGTGCTTAA+AGG + chr5_2:46544336-46544355 None:intergenic 25.0%
! CCTGTATAAAATCAACATTA+GGG + chr5_2:46544377-46544396 None:intergenic 25.0%
! ACCTGTATAAAATCAACATT+AGG + chr5_2:46544378-46544397 None:intergenic 25.0%
! AGGATAACATGGTTATATAA+AGG - chr5_2:46544759-46544778 Msa0772240:intron 25.0%
! TCAAGTATCCTAAGAAATTA+AGG + chr5_2:46544951-46544970 None:intergenic 25.0%
! CTTAGGATACTTGAATAATA+AGG - chr5_2:46544957-46544976 Msa0772240:intron 25.0%
! ACTTGAATCAATGTTAGTAT+TGG - chr5_2:46545540-46545559 Msa0772240:intron 25.0%
!! AATCAATGTTAGTATTGGAA+TGG - chr5_2:46545545-46545564 Msa0772240:intron 25.0%
!!! ACATATTTTCTTCTGGTTTT+GGG + chr5_2:46545949-46545968 None:intergenic 25.0%
! AGTTCAAAAGTAATTTCTCT+AGG + chr5_2:46545989-46546008 None:intergenic 25.0%
!! TTATGTCATACCTTTTCAAT+AGG - chr5_2:46546079-46546098 Msa0772240:intron 25.0%
!!! ACATTTTGGTTTAAGATTCA+TGG - chr5_2:46546158-46546177 Msa0772240:intron 25.0%
!!! GTGATTTAACTTGAAATTCA+TGG - chr5_2:46546190-46546209 Msa0772240:intron 25.0%
!! TTAACTTGAAATTCATGGTT+TGG - chr5_2:46546195-46546214 Msa0772240:intron 25.0%
!!! TCTTTTTTAACCAATACGTA+CGG - chr5_2:46546264-46546283 Msa0772240:intron 25.0%
! AGTATAATGCCACAATAAAA+GGG - chr5_2:46546500-46546519 Msa0772240:intron 25.0%
! ATTTAGTTGAAATTTCTGCT+CGG - chr5_2:46546570-46546589 Msa0772240:intron 25.0%
!! CTTTTTACTAAGAATAATGC+TGG + chr5_2:46546627-46546646 None:intergenic 25.0%
! AGTGGTACAAATAAACTTAA+AGG + chr5_2:46546743-46546762 None:intergenic 25.0%
! TTAGATCATAAAATCTTCGA+GGG + chr5_2:46546884-46546903 None:intergenic 25.0%
! TTTAGATCATAAAATCTTCG+AGG + chr5_2:46546885-46546904 None:intergenic 25.0%
!!! TTCGTTGGTTTTTGTTATAT+TGG + chr5_2:46547606-46547625 None:intergenic 25.0%
!!! GGAATTTGAAAAGTATTTTG+AGG + chr5_2:46547654-46547673 None:intergenic 25.0%
!! AACATAATTTTCAGCTCATT+TGG - chr5_2:46547753-46547772 Msa0772240:intron 25.0%
!!! ATTTCAAACAATTTTCGAGT+TGG - chr5_2:46547814-46547833 Msa0772240:intron 25.0%
! AATGATATTCTAATCTCATC+AGG - chr5_2:46548195-46548214 Msa0772240:intron 25.0%
! GTAATTTATATCCTGAGTAT+AGG + chr5_2:46548237-46548256 None:intergenic 25.0%
! ACTCAGGATATAAATTACAA+AGG - chr5_2:46548239-46548258 Msa0772240:intron 25.0%
! ATAAATTACAAAGGAAAGTC+AGG - chr5_2:46548248-46548267 Msa0772240:intron 25.0%
! GTTAAACAAAACTAAGGAAA+GGG + chr5_2:46548525-46548544 None:intergenic 25.0%
! ACAAAGGTTAAACAAAACTA+AGG + chr5_2:46548531-46548550 None:intergenic 25.0%
! ACTTAAAAGGAAACAAACAA+AGG + chr5_2:46548547-46548566 None:intergenic 25.0%
! TGAACATTGGAATATGAATT+AGG + chr5_2:46548626-46548645 None:intergenic 25.0%
! GTGTATACTATTGTAAATTC+CGG + chr5_2:46543422-46543441 None:intergenic 25.0%
! TAACAACTTTGAGTAAGAAA+TGG + chr5_2:46543551-46543570 None:intergenic 25.0%
! ATGGGATAGTAAATTGAATT+TGG + chr5_2:46543649-46543668 None:intergenic 25.0%
! ATAACACCTAATAGTACAAT+GGG + chr5_2:46543667-46543686 None:intergenic 25.0%
! GTTAAGAAATTAGAACCATT+AGG - chr5_2:46549289-46549308 Msa0772240:intron 25.0%
!! TTCAAATCCTTTTCATTTTC+TGG + chr5_2:46549334-46549353 None:intergenic 25.0%
!!! GATTTTTTTAACCTGATTTC+TGG - chr5_2:46549370-46549389 Msa0772240:CDS 25.0%
! TCATAGAAATCTTATTGCTA+TGG - chr5_2:46544002-46544021 Msa0772240:intron 25.0%
! AAACCATATAAATGGAACAT+CGG + chr5_2:46544102-46544121 None:intergenic 25.0%
!! TTTATAGCTTTTGTGCTTAA+AGG + chr5_2:46544336-46544355 None:intergenic 25.0%
! CCTGTATAAAATCAACATTA+GGG + chr5_2:46544377-46544396 None:intergenic 25.0%
! ACCTGTATAAAATCAACATT+AGG + chr5_2:46544378-46544397 None:intergenic 25.0%
!!! TTGTTTTCCTAGATTTGTTA+AGG - chr5_2:46549956-46549975 Msa0772240:CDS 25.0%
! TAAATACTAAAGGGATAACA+TGG - chr5_2:46550239-46550258 Msa0772240:CDS 25.0%
! TCAAGTATCCTAAGAAATTA+AGG + chr5_2:46544951-46544970 None:intergenic 25.0%
! ACTTGAATCAATGTTAGTAT+TGG - chr5_2:46545540-46545559 Msa0772240:intron 25.0%
!! AATCAATGTTAGTATTGGAA+TGG - chr5_2:46545545-46545564 Msa0772240:intron 25.0%
!! TTGGTTAAATGTGATTGTTT+TGG - chr5_2:46551245-46551264 Msa0772240:CDS 25.0%
!!! TGGTTGGTATTCAAATATTT+TGG - chr5_2:46551618-46551637 Msa0772240:five_prime_UTR 25.0%
!!! GTGATTTAACTTGAAATTCA+TGG - chr5_2:46546190-46546209 Msa0772240:intron 25.0%
!! TTAACTTGAAATTCATGGTT+TGG - chr5_2:46546195-46546214 Msa0772240:intron 25.0%
ACATGAGAATCAAAGATAGA+CGG + chr5_2:46542930-46542949 None:intergenic 30.0%
!! AGTTGATAATGCAGTTTAGA+GGG + chr5_2:46543139-46543158 None:intergenic 30.0%
TGAAGATGATGATATAAAGG+AGG + chr5_2:46543175-46543194 None:intergenic 30.0%
!! TTTTTGGTGAATACCAAGAA+GGG + chr5_2:46543399-46543418 None:intergenic 30.0%
! CTATTGTAAATTCCGGTTTT+TGG + chr5_2:46543415-46543434 None:intergenic 30.0%
GTTACCTTTAGTCAAATCAA+TGG - chr5_2:46543567-46543586 Msa0772240:intron 30.0%
TACTATCCCATTGTACTATT+AGG - chr5_2:46543658-46543677 Msa0772240:intron 30.0%
CATAACACCTAATAGTACAA+TGG + chr5_2:46543668-46543687 None:intergenic 30.0%
ATTTCATCAACACTACTAAG+AGG + chr5_2:46543721-46543740 None:intergenic 30.0%
GTTAAGAAATTAGAACCACT+AGG - chr5_2:46543796-46543815 Msa0772240:intron 30.0%
!! TTTTCTGGCACAGAAATAAT+AGG + chr5_2:46543826-46543845 None:intergenic 30.0%
! ATCGAATCCTTTTCATTTTC+TGG + chr5_2:46543841-46543860 None:intergenic 30.0%
AAACAAAGTTACCAGAAATC+AGG + chr5_2:46543891-46543910 None:intergenic 30.0%
! AACAGCTAGATACACATTTT+TGG + chr5_2:46544076-46544095 None:intergenic 30.0%
TTGACATTGATGAGACTATT+AGG - chr5_2:46544181-46544200 Msa0772240:intron 30.0%
TGACATTGATGAGACTATTA+GGG - chr5_2:46544182-46544201 Msa0772240:intron 30.0%
!!! CCCTAATGTTGATTTTATAC+AGG - chr5_2:46544374-46544393 Msa0772240:intron 30.0%
GCACATCCTTAAAAAAATCT+AGG + chr5_2:46544473-46544492 None:intergenic 30.0%
!! TAAAGGTTTTGTCTATTGTG+TGG - chr5_2:46544776-46544795 Msa0772240:intron 30.0%
AATCAATCTCATGCTAATGT+AGG + chr5_2:46544810-46544829 None:intergenic 30.0%
ATGTCGACAATTGATAAAGA+TGG - chr5_2:46544988-46545007 Msa0772240:intron 30.0%
! AATTTTGCATCCTGAAATAG+TGG - chr5_2:46545256-46545275 Msa0772240:intron 30.0%
TTCATATACTTACCCTGTAA+CGG + chr5_2:46545288-46545307 None:intergenic 30.0%
ACAAAATCGATAACATCCTT+TGG + chr5_2:46545457-46545476 None:intergenic 30.0%
! TTGGTTGAATGTGATTGTTT+TGG - chr5_2:46545784-46545803 Msa0772240:intron 30.0%
ATGCATCATGAGTGATATTA+AGG - chr5_2:46545810-46545829 Msa0772240:intron 30.0%
!!! GACATATTTTCTTCTGGTTT+TGG + chr5_2:46545950-46545969 None:intergenic 30.0%
! ATACAGGACATATTTTCTTC+TGG + chr5_2:46545956-46545975 None:intergenic 30.0%
AGAAGAAAATATGTCCTGTA+TGG - chr5_2:46545955-46545974 Msa0772240:intron 30.0%
TATTTAATATCTCAGCCACA+TGG - chr5_2:46546102-46546121 Msa0772240:intron 30.0%
GTATACATAAAATCTCCATG+TGG + chr5_2:46546120-46546139 None:intergenic 30.0%
! GAGATTTTATGTATACAGCT+TGG - chr5_2:46546124-46546143 Msa0772240:intron 30.0%
! TTTTATGTATACAGCTTGGT+TGG - chr5_2:46546128-46546147 Msa0772240:intron 30.0%
!! TGGTTGGTATTCAAACATTT+TGG - chr5_2:46546144-46546163 Msa0772240:intron 30.0%
!!! TTTTGGTTTAAGATTCATGG+TGG - chr5_2:46546161-46546180 Msa0772240:intron 30.0%
!! GTACGTATTGGTTAAAAAAG+AGG + chr5_2:46546265-46546284 None:intergenic 30.0%
CTAACATGGTGTAATACAAA+CGG - chr5_2:46546292-46546311 Msa0772240:intron 30.0%
TTGTTGACATCTTTCAACTA+GGG + chr5_2:46546356-46546375 None:intergenic 30.0%
ATTTCTCGAGATCTAGTTAA+GGG + chr5_2:46546379-46546398 None:intergenic 30.0%
AATTTCTCGAGATCTAGTTA+AGG + chr5_2:46546380-46546399 None:intergenic 30.0%
TATTGTGGCATTATACTGTT+CGG + chr5_2:46546497-46546516 None:intergenic 30.0%
CAGTATAATGCCACAATAAA+AGG - chr5_2:46546499-46546518 Msa0772240:intron 30.0%
!! GAGGGTATTCTTGTAATTAA+GGG - chr5_2:46546541-46546560 Msa0772240:intron 30.0%
TTTAGTTGAAATTTCTGCTC+GGG - chr5_2:46546571-46546590 Msa0772240:intron 30.0%
GTAGAATCAGAATGTTAAGA+TGG + chr5_2:46546935-46546954 None:intergenic 30.0%
! CTTTTGGATGATTGAATGTT+GGG + chr5_2:46546992-46547011 None:intergenic 30.0%
TGGTATCTATGAAGTTTAGT+TGG - chr5_2:46547266-46547285 Msa0772240:intron 30.0%
GGTATCTATGAAGTTTAGTT+GGG - chr5_2:46547267-46547286 Msa0772240:intron 30.0%
! TTCTAGTTGTAGAATTTCGT+TGG + chr5_2:46547621-46547640 None:intergenic 30.0%
!!! AAACAATTTTCGAGTTGGAT+CGG - chr5_2:46547819-46547838 Msa0772240:intron 30.0%
GATAGATATAGGATGTGATA+AGG - chr5_2:46547964-46547983 Msa0772240:intron 30.0%
TGCATCAAACATGAGATTTA+AGG - chr5_2:46548311-46548330 Msa0772240:intron 30.0%
ATCAAACATGAGATTTAAGG+AGG - chr5_2:46548314-46548333 Msa0772240:intron 30.0%
!!! AACCGAGTTTTAGACTTTAA+GGG + chr5_2:46548390-46548409 None:intergenic 30.0%
!!! AAACCGAGTTTTAGACTTTA+AGG + chr5_2:46548391-46548410 None:intergenic 30.0%
!!! TTTGGTTTTTGACTGTTTTG+TGG + chr5_2:46548466-46548485 None:intergenic 30.0%
GGTTAAACAAAACTAAGGAA+AGG + chr5_2:46548526-46548545 None:intergenic 30.0%
!! TTTGGTGAGAAGTACTTAAA+AGG + chr5_2:46548560-46548579 None:intergenic 30.0%
ATTGAGAAAACAAGGTTTAG+TGG + chr5_2:46548685-46548704 None:intergenic 30.0%
! GGTTTTCAATTGAATTTGTG+TGG + chr5_2:46548712-46548731 None:intergenic 30.0%
AATGCTCTTATAAAGGACTA+GGG + chr5_2:46548748-46548767 None:intergenic 30.0%
!! TTGATTTTCAGGAAAGTGAA+TGG + chr5_2:46548823-46548842 None:intergenic 30.0%
TTCACTTTCCTGAAAATCAA+TGG - chr5_2:46548823-46548842 Msa0772240:three_prime_UTR 30.0%
!! TTTTTGGTGAATACCAAGAA+GGG + chr5_2:46543399-46543418 None:intergenic 30.0%
! CTATTGTAAATTCCGGTTTT+TGG + chr5_2:46543415-46543434 None:intergenic 30.0%
GTTACCTTTAGTCAAATCAA+TGG - chr5_2:46543567-46543586 Msa0772240:intron 30.0%
TACTATCCCATTGTACTATT+AGG - chr5_2:46543658-46543677 Msa0772240:intron 30.0%
CATAACACCTAATAGTACAA+TGG + chr5_2:46543668-46543687 None:intergenic 30.0%
ATTTCATCAACACTACTAAG+AGG + chr5_2:46543721-46543740 None:intergenic 30.0%
GAAATAATAGGAATGCCTAA+TGG + chr5_2:46549307-46549326 None:intergenic 30.0%
!! TTTTCTGGCACAGAAATAAT+AGG + chr5_2:46543826-46543845 None:intergenic 30.0%
! AAATGAAAAGGATTTGAAGC+AGG - chr5_2:46549336-46549355 Msa0772240:CDS 30.0%
AAACAAAGTTACCAGAAATC+AGG + chr5_2:46543891-46543910 None:intergenic 30.0%
! GTGTCTTCTTGTTTAATAAC+CGG + chr5_2:46543925-46543944 None:intergenic 30.0%
! AACAGCTAGATACACATTTT+TGG + chr5_2:46544076-46544095 None:intergenic 30.0%
AGAGCGATAAACCATATAAA+TGG + chr5_2:46549603-46549622 None:intergenic 30.0%
!!! CCCTAATGTTGATTTTATAC+AGG - chr5_2:46544374-46544393 Msa0772240:intron 30.0%
GGGATAACATGGTAATATAA+AGG - chr5_2:46550250-46550269 Msa0772240:CDS 30.0%
AATCAATCTCATGCAAATGT+AGG + chr5_2:46550301-46550320 None:intergenic 30.0%
AAGACAGAAACAAAAGTTAC+AGG + chr5_2:46544855-46544874 None:intergenic 30.0%
CTTAGGATACTTGAATAATG+AGG - chr5_2:46550452-46550471 Msa0772240:CDS 30.0%
ATGTCGACAATTGATAAAGA+TGG - chr5_2:46544988-46545007 Msa0772240:intron 30.0%
! AATTTTGCATCCTGAAATAG+TGG - chr5_2:46545256-46545275 Msa0772240:intron 30.0%
TTCATATACTTACCCTGTAA+CGG + chr5_2:46545288-46545307 None:intergenic 30.0%
GGAAAATGATGAAACACTTA+AGG + chr5_2:46545355-46545374 None:intergenic 30.0%
ACAAAATCCAGAAGAAAATC+TGG - chr5_2:46551407-46551426 Msa0772240:five_prime_UTR 30.0%
! TTATGTCACACCTTTTCAAT+AGG - chr5_2:46551553-46551572 Msa0772240:five_prime_UTR 30.0%
TATTTAATATCTCAGCCACA+TGG - chr5_2:46546102-46546121 Msa0772240:intron 30.0%
GTATACATAAAATCTCCATG+TGG + chr5_2:46546120-46546139 None:intergenic 30.0%
! GAGATTTTATGTATACAGCT+TGG - chr5_2:46546124-46546143 Msa0772240:intron 30.0%
! TTTTATGTATACAGCTTGGT+TGG - chr5_2:46546128-46546147 Msa0772240:intron 30.0%
!!! TTTTGGTTTAAGATTCATGG+TGG - chr5_2:46546161-46546180 Msa0772240:intron 30.0%
TTTGCTACATGGTTGTTGAA+AGG + chr5_2:46542978-46542997 None:intergenic 35.0%
CTAGAAGCTTACAAAATCCA+GGG + chr5_2:46543072-46543091 None:intergenic 35.0%
ACTAGAAGCTTACAAAATCC+AGG + chr5_2:46543073-46543092 None:intergenic 35.0%
!! CAGTTGATAATGCAGTTTAG+AGG + chr5_2:46543140-46543159 None:intergenic 35.0%
TGCATTATCAACTGTAACAG+CGG - chr5_2:46543146-46543165 Msa0772240:three_prime_UTR 35.0%
!!! GTTTTTGGTGAATACCAAGA+AGG + chr5_2:46543400-46543419 None:intergenic 35.0%
TCTTGGTATTCACCAAAAAC+CGG - chr5_2:46543400-46543419 Msa0772240:intron 35.0%
ACAATAGTATACACTCTCCT+AGG - chr5_2:46543428-46543447 Msa0772240:intron 35.0%
ACGATACAACATCGAGAAAA+GGG + chr5_2:46543468-46543487 None:intergenic 35.0%
AACGATACAACATCGAGAAA+AGG + chr5_2:46543469-46543488 None:intergenic 35.0%
!!! ATTTTTTCTCACCCTCATGA+TGG - chr5_2:46543490-46543509 Msa0772240:intron 35.0%
!!! TTTTTTCTCACCCTCATGAT+GGG - chr5_2:46543491-46543510 Msa0772240:intron 35.0%
TCCAGATGAGGAATCAATAA+GGG + chr5_2:46543524-46543543 None:intergenic 35.0%
TTCCAGATGAGGAATCAATA+AGG + chr5_2:46543525-46543544 None:intergenic 35.0%
!! GAAGCCATTGATTTGACTAA+AGG + chr5_2:46543574-46543593 None:intergenic 35.0%
TTAGTCAAATCAATGGCTTC+TGG - chr5_2:46543574-46543593 Msa0772240:intron 35.0%
! GCTTCTGGTCTTCATAAAAT+GGG - chr5_2:46543589-46543608 Msa0772240:intron 35.0%
CATAAAATGGGAGTTTCACA+AGG - chr5_2:46543601-46543620 Msa0772240:intron 35.0%
TTGGAAGTAGAAGCAAAACA+AGG + chr5_2:46543630-46543649 None:intergenic 35.0%
! CTATTAGGTGTTATGTACCT+AGG - chr5_2:46543673-46543692 Msa0772240:intron 35.0%
ACACTACTAAGAGGATTCAA+TGG + chr5_2:46543712-46543731 None:intergenic 35.0%
! TGTTGATGAAATTCGTAAGC+AGG - chr5_2:46543729-46543748 Msa0772240:intron 35.0%
GAAATAATAGGAATGCCTAG+TGG + chr5_2:46543814-46543833 None:intergenic 35.0%
TTCTGTGCCAGAAAATGAAA+AGG - chr5_2:46543831-46543850 Msa0772240:intron 35.0%
!!! CTTTGTTTTGCCTCAAAATC+TGG - chr5_2:46543903-46543922 Msa0772240:intron 35.0%
! GCTGCTATATTGTTTTCTTC+TGG - chr5_2:46543946-46543965 Msa0772240:intron 35.0%
! TTGTTTTCTTCTGGTACTAC+TGG - chr5_2:46543955-46543974 Msa0772240:intron 35.0%
! TATTGCTATGGTTGAGCTTT+TGG - chr5_2:46544014-46544033 Msa0772240:intron 35.0%
TTGCCGATGTTCCATTTATA+TGG - chr5_2:46544096-46544115 Msa0772240:intron 35.0%
TGGTTTATCTCTCTATGCTA+CGG - chr5_2:46544116-46544135 Msa0772240:intron 35.0%
AAAGTGGTAGATTGGAATAG+TGG - chr5_2:46544622-46544641 Msa0772240:intron 35.0%
AATTGGAATAGCAACAAGAC+AGG + chr5_2:46544906-46544925 None:intergenic 35.0%
CGACAATTGATAAAGATGGT+TGG - chr5_2:46544992-46545011 Msa0772240:intron 35.0%
TATCAAATACAAGGGCTTTC+AGG - chr5_2:46545086-46545105 Msa0772240:intron 35.0%
! TTTTCCATATATCAGTGCCA+AGG - chr5_2:46545369-46545388 Msa0772240:intron 35.0%
!!! TATCGATTTTGTTGCTAAGC+AGG - chr5_2:46545465-46545484 Msa0772240:intron 35.0%
!!! TAACCCTTTTTTTTCTTGGC+AGG - chr5_2:46545579-46545598 Msa0772240:intron 35.0%
CAACCTGCCAAGAAAAAAAA+GGG + chr5_2:46545585-46545604 None:intergenic 35.0%
GAAATGCCTTAGAGTTTAGA+AGG + chr5_2:46545703-46545722 None:intergenic 35.0%
ATTACCAAAGACATGCATAG+TGG - chr5_2:46545743-46545762 Msa0772240:intron 35.0%
TTACCAAAGACATGCATAGT+GGG - chr5_2:46545744-46545763 Msa0772240:intron 35.0%
GGGTTATCATAGCATGAAAT+TGG - chr5_2:46545765-46545784 Msa0772240:intron 35.0%
GTTAGTTATTCCGTACGTAT+TGG + chr5_2:46546277-46546296 None:intergenic 35.0%
TACGTACGGAATAACTAACA+TGG - chr5_2:46546278-46546297 Msa0772240:intron 35.0%
GTTGTTGACATCTTTCAACT+AGG + chr5_2:46546357-46546376 None:intergenic 35.0%
ATTGTGGCATTATACTGTTC+GGG + chr5_2:46546496-46546515 None:intergenic 35.0%
TAATGCCACAATAAAAGGGA+TGG - chr5_2:46546504-46546523 Msa0772240:intron 35.0%
!! GGAGGGTATTCTTGTAATTA+AGG - chr5_2:46546540-46546559 Msa0772240:intron 35.0%
AGTGTCTAAGTGGATCTTAT+TGG + chr5_2:46546819-46546838 None:intergenic 35.0%
GAATAGTACAAGTGTCTAAG+TGG + chr5_2:46546829-46546848 None:intergenic 35.0%
AGAATGTTAAGATGGATGAG+TGG + chr5_2:46546927-46546946 None:intergenic 35.0%
! CCTTTTGGATGATTGAATGT+TGG + chr5_2:46546993-46547012 None:intergenic 35.0%
CCAACATTCAATCATCCAAA+AGG - chr5_2:46546990-46547009 Msa0772240:intron 35.0%
AGGTGCTTAAAAGATAGACA+CGG - chr5_2:46547518-46547537 Msa0772240:intron 35.0%
!! TTTGGTTCTTGAACCAAGTA+CGG - chr5_2:46547771-46547790 Msa0772240:intron 35.0%
AAATTAGACCCAATAGTCGT+TGG + chr5_2:46547861-46547880 None:intergenic 35.0%
ATCCTATCCTAACCATCAAA+CGG + chr5_2:46547919-46547938 None:intergenic 35.0%
ATGCACACATGATAACAAAC+AGG - chr5_2:46548019-46548038 Msa0772240:intron 35.0%
TTACAAAGGAAAGTCAGGAT+AGG - chr5_2:46548253-46548272 Msa0772240:intron 35.0%
! CACCCTTAAAGTCTAAAACT+CGG - chr5_2:46548385-46548404 Msa0772240:intron 35.0%
!! TTTTGACTGTTTTGTGGAAG+AGG + chr5_2:46548460-46548479 None:intergenic 35.0%
!! GGTTTTGTGTTTGTGAACAT+TGG + chr5_2:46548639-46548658 None:intergenic 35.0%
AAACAAGGTTTAGTGGAGTT+TGG + chr5_2:46548678-46548697 None:intergenic 35.0%
GTGGTTGAATTGAGAAAACA+AGG + chr5_2:46548693-46548712 None:intergenic 35.0%
TATAAAGGACTAGGGTTTAG+TGG + chr5_2:46548740-46548759 None:intergenic 35.0%
GAATGCTCTTATAAAGGACT+AGG + chr5_2:46548749-46548768 None:intergenic 35.0%
!!! ATTTGCAGCCATTGATTTTC+AGG + chr5_2:46543341-46543360 None:intergenic 35.0%
!!! GTTTTTGGTGAATACCAAGA+AGG + chr5_2:46543400-46543419 None:intergenic 35.0%
TCTTGGTATTCACCAAAAAC+CGG - chr5_2:46543400-46543419 Msa0772240:intron 35.0%
ACAATAGTATACACTCTCCT+AGG - chr5_2:46543428-46543447 Msa0772240:intron 35.0%
!! GAAGCCATTGATTTGACTAA+AGG + chr5_2:46543574-46543593 None:intergenic 35.0%
TTAGTCAAATCAATGGCTTC+TGG - chr5_2:46543574-46543593 Msa0772240:intron 35.0%
TTGGAAGTAGAAGCAAAACA+AGG + chr5_2:46543630-46543649 None:intergenic 35.0%
! CTATTAGGTGTTATGTACCT+AGG - chr5_2:46543673-46543692 Msa0772240:intron 35.0%
ACACTACTAAGAGGATTCAA+TGG + chr5_2:46543712-46543731 None:intergenic 35.0%
TTCTGTGCCAGAAAATGAAA+AGG - chr5_2:46543831-46543850 Msa0772240:intron 35.0%
!! TGTTTAATAACCGGCTTTTG+AGG + chr5_2:46549409-46549428 None:intergenic 35.0%
! GCTGCTATATTGTTTTCTTC+TGG - chr5_2:46543946-46543965 Msa0772240:intron 35.0%
! TTGTTTTCTTCTGGTACTAC+TGG - chr5_2:46543955-46543974 Msa0772240:intron 35.0%
! TATTGCTATGGTTGAGCTTT+TGG - chr5_2:46544014-46544033 Msa0772240:intron 35.0%
TTGCCGATGTTCCATTTATA+TGG - chr5_2:46544096-46544115 Msa0772240:intron 35.0%
GTCTCGTCAATGTCAAATTT+CGG + chr5_2:46549670-46549689 None:intergenic 35.0%
TTGACATTGACGAGACTATT+AGG - chr5_2:46549674-46549693 Msa0772240:intron 35.0%
TGACATTGACGAGACTATTA+GGG - chr5_2:46549675-46549694 Msa0772240:intron 35.0%
AATCAACATTAGGGAAAGCT+TGG + chr5_2:46549861-46549880 None:intergenic 35.0%
TGCACATCCTTAACAAATCT+AGG + chr5_2:46549966-46549985 None:intergenic 35.0%
AAAGTGGTAGATTGGAATAG+TGG - chr5_2:46544622-46544641 Msa0772240:intron 35.0%
AGAGGTCCTTCAATTATGAA+AGG - chr5_2:46550177-46550196 Msa0772240:intron 35.0%
AATTGGAATAGCAACAAGAC+AGG + chr5_2:46544906-46544925 None:intergenic 35.0%
CGACAATTGATAAAGATGGT+TGG - chr5_2:46544992-46545011 Msa0772240:intron 35.0%
TATCAAATACAAGGGCTTTC+AGG - chr5_2:46545086-46545105 Msa0772240:intron 35.0%
! TTTTCCATATATCAGTGCCA+AGG - chr5_2:46545369-46545388 Msa0772240:intron 35.0%
!!! TTAACCCTTTTTTTCTTGGC+AGG - chr5_2:46551077-46551096 Msa0772240:CDS 35.0%
GGGTTATCATAGCATGAAAT+TGG - chr5_2:46545765-46545784 Msa0772240:intron 35.0%
! TGCATCATGAGTGCTATTAA+AGG - chr5_2:46551272-46551291 Msa0772240:exon 35.0%
! ATACATGCCAGATTTTCTTC+TGG + chr5_2:46551417-46551436 None:intergenic 35.0%
AGAAGAAAATCTGGCATGTA+TGG - chr5_2:46551416-46551435 Msa0772240:five_prime_UTR 35.0%
ATTTCTCTAGTGCACATACA+AGG + chr5_2:46551450-46551469 None:intergenic 35.0%
TGAGAATCAAAGATAGACGG+TGG + chr5_2:46542927-46542946 None:intergenic 40.0%
TTGCAATGCACTTTGCTACA+TGG + chr5_2:46542989-46543008 None:intergenic 40.0%
GCGAATTCTCACGCAAATTT+CGG - chr5_2:46543257-46543276 Msa0772240:intron 40.0%
TTCAGAAAAGTGAATGGCAC+TGG + chr5_2:46543324-46543343 None:intergenic 40.0%
TACAACATCGAGAAAAGGGT+CGG + chr5_2:46543464-46543483 None:intergenic 40.0%
! TTTTTCTCACCCTCATGATG+GGG - chr5_2:46543492-46543511 Msa0772240:intron 40.0%
AGAAATGGAAGTTCCAGATG+AGG + chr5_2:46543536-46543555 None:intergenic 40.0%
! GGCTTCTGGTCTTCATAAAA+TGG - chr5_2:46543588-46543607 Msa0772240:intron 40.0%
GGTTTATCTCTCTATGCTAC+GGG - chr5_2:46544117-46544136 Msa0772240:intron 40.0%
TGCTACGGGATTATTGTCAT+TGG - chr5_2:46544131-46544150 Msa0772240:intron 40.0%
GCTACGGGATTATTGTCATT+GGG - chr5_2:46544132-46544151 Msa0772240:intron 40.0%
TCTTGTTCCACCGATATTGT+CGG - chr5_2:46544236-46544255 Msa0772240:intron 40.0%
! TAAGTTGCAGAGTTTGAGAC+AGG - chr5_2:46544293-46544312 Msa0772240:intron 40.0%
AATCAACATTAGGGAGAGCT+TGG + chr5_2:46544368-46544387 None:intergenic 40.0%
GGTTTATGGAATGACTGAGT+CGG - chr5_2:46544516-46544535 Msa0772240:intron 40.0%
GTTTATGGAATGACTGAGTC+GGG - chr5_2:46544517-46544536 Msa0772240:intron 40.0%
TTTCGCAACTATTCCTCACT+AGG - chr5_2:46544574-46544593 Msa0772240:intron 40.0%
TTCGCAACTATTCCTCACTA+GGG - chr5_2:46544575-46544594 Msa0772240:intron 40.0%
AGAGGGCCTTCAATTATGAA+AGG - chr5_2:46544685-46544704 Msa0772240:intron 40.0%
! AAAGATGGTTGGCTACATAC+TGG - chr5_2:46545003-46545022 Msa0772240:intron 40.0%
AACACAGCTTCTAAATCAGC+AGG + chr5_2:46545236-46545255 None:intergenic 40.0%
!! TCATCCTTGGCACTGATATA+TGG + chr5_2:46545376-46545395 None:intergenic 40.0%
! TGGAAGTGTACTATCTCCAA+AGG - chr5_2:46545438-46545457 Msa0772240:intron 40.0%
GCAACCTGCCAAGAAAAAAA+AGG + chr5_2:46545586-46545605 None:intergenic 40.0%
ACTTTGCGAACCTTCTTGAA+TGG + chr5_2:46545610-46545629 None:intergenic 40.0%
ATTCAAGAAGGTTCGCAAAG+TGG - chr5_2:46545609-46545628 Msa0772240:intron 40.0%
! AGCAGTTTCTGAGTTGCTTT+CGG + chr5_2:46545678-46545697 None:intergenic 40.0%
TGCTTGCCTTCTAAACTCTA+AGG - chr5_2:46545694-46545713 Msa0772240:intron 40.0%
TACCAAAGACATGCATAGTG+GGG - chr5_2:46545745-46545764 Msa0772240:intron 40.0%
! TCTAGGATCTCTTACCATAC+AGG + chr5_2:46545972-46545991 None:intergenic 40.0%
! TGGTTTAAGATTCATGGTGG+TGG - chr5_2:46546164-46546183 Msa0772240:intron 40.0%
!! TTAAGATTCATGGTGGTGGA+TGG - chr5_2:46546168-46546187 Msa0772240:intron 40.0%
AATACCCTCCCATGTATTGT+GGG + chr5_2:46546530-46546549 None:intergenic 40.0%
ATTTCTGCTCGGGACTATTT+CGG - chr5_2:46546581-46546600 Msa0772240:intron 40.0%
TATTTCGGGAAGAAGCTTGT+CGG - chr5_2:46546596-46546615 Msa0772240:intron 40.0%
ACAATAATGCTGCAGCTAGA+TGG + chr5_2:46547021-46547040 None:intergenic 40.0%
ATGTAGTAGTTCGAGTCGTT+TGG + chr5_2:46547710-46547729 None:intergenic 40.0%
GACAATTAACTCACCGTACT+TGG + chr5_2:46547787-46547806 None:intergenic 40.0%
TTCTAACTCAGCCTATACTC+AGG - chr5_2:46548223-46548242 Msa0772240:intron 40.0%
AAGGAAAGTCAGGATAGGAT+AGG - chr5_2:46548258-46548277 Msa0772240:intron 40.0%
GTCAGGATAGGATAGGAAAA+TGG - chr5_2:46548265-46548284 Msa0772240:intron 40.0%
CTCATGTTTGATGCACCAAA+AGG + chr5_2:46548306-46548325 None:intergenic 40.0%
ACAAAACTAAGGAAAGGGAC+AGG + chr5_2:46548520-46548539 None:intergenic 40.0%
TCTTGGGACCATAATCTGTT+TGG + chr5_2:46548588-46548607 None:intergenic 40.0%
AAACAGATTATGGTCCCAAG+AGG - chr5_2:46548587-46548606 Msa0772240:intron 40.0%
GAACATAACAGCTACCTCTT+GGG + chr5_2:46548604-46548623 None:intergenic 40.0%
TTCAGGAAAGTGAATGGTAC+TGG + chr5_2:46548817-46548836 None:intergenic 40.0%
ACGATACAACGTCGAGAAAA+GGG + chr5_2:46548961-46548980 None:intergenic 40.0%
AACGATACAACGTCGAGAAA+AGG + chr5_2:46548962-46548981 None:intergenic 40.0%
!!! ATTTTTTCTCACCCTCGTGA+TGG - chr5_2:46548983-46549002 Msa0772240:CDS 40.0%
!!! TTTTTTCTCACCCTCGTGAT+GGG - chr5_2:46548984-46549003 Msa0772240:CDS 40.0%
!! CCCAGAAGAGGTATCAATAA+GGG + chr5_2:46549017-46549036 None:intergenic 40.0%
CCCTTATTGATACCTCTTCT+GGG - chr5_2:46549014-46549033 Msa0772240:intron 40.0%
!! TCCCAGAAGAGGTATCAATA+AGG + chr5_2:46549018-46549037 None:intergenic 40.0%
! GGCTTCTGGTCTTCATAAAA+CGG - chr5_2:46543588-46543607 Msa0772240:intron 40.0%
! GCTTCTGGTCTTCATAAAAC+GGG - chr5_2:46549082-46549101 Msa0772240:intron 40.0%
CATAAAACGGGAGTTTCACA+AGG - chr5_2:46549094-46549113 Msa0772240:intron 40.0%
! TTTGAAGCAGGCTTGTTTCT+CGG - chr5_2:46549348-46549367 Msa0772240:CDS 40.0%
!!! CTTTGTTTTGCCTCAAAAGC+CGG - chr5_2:46549396-46549415 Msa0772240:intron 40.0%
TGGTTTATCGCTCTTTGCTA+CGG - chr5_2:46549609-46549628 Msa0772240:CDS 40.0%
TGCTACGGGATTATTGTCAT+TGG - chr5_2:46544131-46544150 Msa0772240:intron 40.0%
GCTACGGGATTATTGTCATT+GGG - chr5_2:46544132-46544151 Msa0772240:intron 40.0%
TGTTGTTCCACCGATATTGT+CGG - chr5_2:46549729-46549748 Msa0772240:intron 40.0%
! TAAGTTGCAGAGTTTGAGAC+AGG - chr5_2:46544293-46544312 Msa0772240:intron 40.0%
GGTTTATGGAATGACTGAGT+CGG - chr5_2:46544516-46544535 Msa0772240:intron 40.0%
GTTTATGGAATGACTGAGTC+GGG - chr5_2:46544517-46544536 Msa0772240:intron 40.0%
TTTCGCAACTATTCCTCACT+AGG - chr5_2:46544574-46544593 Msa0772240:intron 40.0%
TTCGCAACTATTCCTCACTA+GGG - chr5_2:46544575-46544594 Msa0772240:intron 40.0%
AGGGTTGTTAACTCCAAACA+TGG - chr5_2:46550086-46550105 Msa0772240:CDS 40.0%
GTTGTTAACTCCAAACATGG+AGG - chr5_2:46550089-46550108 Msa0772240:CDS 40.0%
! AAAGATGGTTGGCTACATAC+TGG - chr5_2:46545003-46545022 Msa0772240:intron 40.0%
AACACAGCTTCTAAATCAGC+AGG + chr5_2:46545236-46545255 None:intergenic 40.0%
!! TCATCCTTGGCACTGATATA+TGG + chr5_2:46545376-46545395 None:intergenic 40.0%
GCATTTGTGGTCAAGAAAGT+TGG - chr5_2:46550917-46550936 Msa0772240:CDS 40.0%
! TGGAAGTGTACTTTCTCCAA+AGG - chr5_2:46550937-46550956 Msa0772240:CDS 40.0%
ACGAAGTCGATAACATCCTT+TGG + chr5_2:46550956-46550975 None:intergenic 40.0%
GCAACCTGCCAAGAAAAAAA+GGG + chr5_2:46545586-46545605 None:intergenic 40.0%
AGCAACCTGCCAAGAAAAAA+AGG + chr5_2:46551085-46551104 None:intergenic 40.0%
ACTTTGCGAACCTTCTTGAA+TGG + chr5_2:46545610-46545629 None:intergenic 40.0%
ATTCAAGAAGGTTCGCAAAG+TGG - chr5_2:46545609-46545628 Msa0772240:intron 40.0%
! AGCAGTTTCTGAGTTGCTTT+CGG + chr5_2:46545678-46545697 None:intergenic 40.0%
TGCTTGCCTTCTAAACTCTA+AGG - chr5_2:46545694-46545713 Msa0772240:intron 40.0%
TGCATGCCTTAGAGTTTAGA+AGG + chr5_2:46551201-46551220 None:intergenic 40.0%
!! AAACTCTAAGGCATGCATAG+TGG - chr5_2:46551204-46551223 Msa0772240:CDS 40.0%
!! AACTCTAAGGCATGCATAGT+GGG - chr5_2:46551205-46551224 Msa0772240:CDS 40.0%
! TGGTTTAAGATTCATGGTGG+TGG - chr5_2:46546164-46546183 Msa0772240:intron 40.0%
!! TTAAGATTCATGGTGGTGGA+TGG - chr5_2:46546168-46546187 Msa0772240:intron 40.0%
GCTACATGGTTGTTGAAAGG+TGG + chr5_2:46542975-46542994 None:intergenic 45.0%
AAAATCCAGGGAAGCAATGC+AGG + chr5_2:46543060-46543079 None:intergenic 45.0%
ATTCGCAATCACAAGCGTAC+CGG + chr5_2:46543243-46543262 None:intergenic 45.0%
! GGGTGAGTGATGGTATTTTG+TGG + chr5_2:46543379-46543398 None:intergenic 45.0%
ATACCATCACTCACCCTTCT+TGG - chr5_2:46543383-46543402 Msa0772240:intron 45.0%
ATACCAAGAAGGGTGAGTGA+TGG + chr5_2:46543389-46543408 None:intergenic 45.0%
!! GCCCTTATTGATTCCTCATC+TGG - chr5_2:46543520-46543539 Msa0772240:intron 45.0%
ATGGTGTAACAACAGCACCT+AGG + chr5_2:46543693-46543712 None:intergenic 45.0%
CGTAAGCAGGTTAATGACTG+TGG - chr5_2:46543742-46543761 Msa0772240:intron 45.0%
GCTGTCAATGCCGACAATAT+CGG + chr5_2:46544249-46544268 None:intergenic 45.0%
! TTGCAGAGTTTGAGACAGGT+CGG - chr5_2:46544297-46544316 Msa0772240:intron 45.0%
AGGGTTGTTAGCTCCAAACA+TGG - chr5_2:46544594-46544613 Msa0772240:intron 45.0%
GTTGTTAGCTCCAAACATGG+AGG - chr5_2:46544597-46544616 Msa0772240:intron 45.0%
TCCAAACATGGAGGCAAAAG+TGG - chr5_2:46544606-46544625 Msa0772240:intron 45.0%
!! ACCACTTTTGCCTCCATGTT+TGG + chr5_2:46544610-46544629 None:intergenic 45.0%
TGGAGGCAAAAGTGGTAGAT+TGG - chr5_2:46544614-46544633 Msa0772240:intron 45.0%
GAAAAGGTTCAAGTGGCTTG+AGG + chr5_2:46544881-46544900 None:intergenic 45.0%
ACAGGCAGAAAAGGTTCAAG+TGG + chr5_2:46544888-46544907 None:intergenic 45.0%
AGCAACAAGACAGGCAGAAA+AGG + chr5_2:46544897-46544916 None:intergenic 45.0%
ACAGCTTCTAAATCAGCAGG+AGG + chr5_2:46545233-46545252 None:intergenic 45.0%
TTCTTGACCACAAATGCCAC+TGG + chr5_2:46545415-46545434 None:intergenic 45.0%
AGTGGCATTTGTGGTCAAGA+AGG - chr5_2:46545414-46545433 Msa0772240:intron 45.0%
GCATTTGTGGTCAAGAAGGT+TGG - chr5_2:46545418-46545437 Msa0772240:intron 45.0%
TCTTCACCGACAAGATTCCA+AGG - chr5_2:46545632-46545651 Msa0772240:intron 45.0%
CACAGACCTTGGAATCTTGT+CGG + chr5_2:46545641-46545660 None:intergenic 45.0%
AAGATTCCAAGGTCTGTGAC+TGG - chr5_2:46545643-46545662 Msa0772240:intron 45.0%
AGATTCCAAGGTCTGTGACT+GGG - chr5_2:46545644-46545663 Msa0772240:intron 45.0%
! AGTTTCTGAGTTGCTTTCGG+AGG + chr5_2:46545675-46545694 None:intergenic 45.0%
AACCCCACTATGCATGTCTT+TGG + chr5_2:46545750-46545769 None:intergenic 45.0%
TGCATGCAGATGCACAAGAT+AGG - chr5_2:46546014-46546033 Msa0772240:intron 45.0%
GAATACCCTCCCATGTATTG+TGG + chr5_2:46546531-46546550 None:intergenic 45.0%
TTTCTGCTCGGGACTATTTC+GGG - chr5_2:46546582-46546601 Msa0772240:intron 45.0%
ATTTCGGGAAGAAGCTTGTC+GGG - chr5_2:46546597-46546616 Msa0772240:intron 45.0%
! AGCTAGATGGCTAGACCTTT+TGG + chr5_2:46547008-46547027 None:intergenic 45.0%
!! TACGGTATCGATACCCAACT+CGG - chr5_2:46547395-46547414 Msa0772240:intron 45.0%
CTAATGTACTGAGCCGAGTT+GGG + chr5_2:46547411-46547430 None:intergenic 45.0%
TAGACCCAATAGTCGTTGGT+GGG + chr5_2:46547857-46547876 None:intergenic 45.0%
TTAGACCCAATAGTCGTTGG+TGG + chr5_2:46547858-46547877 None:intergenic 45.0%
ACCCACGCAACATGATGATT+AGG - chr5_2:46547891-46547910 Msa0772240:intron 45.0%
CCCTAATCATCATGTTGCGT+GGG + chr5_2:46547895-46547914 None:intergenic 45.0%
CCCACGCAACATGATGATTA+GGG - chr5_2:46547892-46547911 Msa0772240:intron 45.0%
ACCCTAATCATCATGTTGCG+TGG + chr5_2:46547896-46547915 None:intergenic 45.0%
GATGATTAGGGTCCGTTTGA+TGG - chr5_2:46547904-46547923 Msa0772240:intron 45.0%
! TTAGGGTCCGTTTGATGGTT+AGG - chr5_2:46547909-46547928 Msa0772240:intron 45.0%
! GTCCGTTTGATGGTTAGGAT+AGG - chr5_2:46547914-46547933 Msa0772240:intron 45.0%
! TGCGTTTGATGGTCAGGATA+GGG + chr5_2:46548367-46548386 None:intergenic 45.0%
! GACTTTAAGGGTGCGTTTGA+TGG + chr5_2:46548378-46548397 None:intergenic 45.0%
GTTTGTCGAGCACTAAACGT+GGG + chr5_2:46548423-46548442 None:intergenic 45.0%
GGAACATAACAGCTACCTCT+TGG + chr5_2:46548605-46548624 None:intergenic 45.0%
!! TTTGGCTTGCTTGAGAGTGA+AGG + chr5_2:46548660-46548679 None:intergenic 45.0%
GACTAGGGTTTAGTGGAGTT+TGG + chr5_2:46548733-46548752 None:intergenic 45.0%
! GGGTGAGTGATGGTATTTTG+TGG + chr5_2:46543379-46543398 None:intergenic 45.0%
ATACCATCACTCACCCTTCT+TGG - chr5_2:46543383-46543402 Msa0772240:intron 45.0%
ATACCAAGAAGGGTGAGTGA+TGG + chr5_2:46543389-46543408 None:intergenic 45.0%
TACAACGTCGAGAAAAGGGT+CGG + chr5_2:46548957-46548976 None:intergenic 45.0%
! TTTTTCTCACCCTCGTGATG+GGG - chr5_2:46548985-46549004 Msa0772240:CDS 45.0%
GCCCTTATTGATACCTCTTC+TGG - chr5_2:46549013-46549032 Msa0772240:intron 45.0%
AGAAATGGAAGTCCCAGAAG+AGG + chr5_2:46549029-46549048 None:intergenic 45.0%
ATGGTGTAACAACAGCACCT+AGG + chr5_2:46543693-46543712 None:intergenic 45.0%
CGTAAGCGAGTTAATGACTG+TGG - chr5_2:46549235-46549254 Msa0772240:intron 45.0%
GGTTTATCGCTCTTTGCTAC+GGG - chr5_2:46549610-46549629 Msa0772240:CDS 45.0%
GCTGTCAATGCCGACAATAT+CGG + chr5_2:46544249-46544268 None:intergenic 45.0%
TGGAGTTAACAACCCTAGTG+AGG + chr5_2:46550082-46550101 None:intergenic 45.0%
TCCAAACATGGAGGCAAAAG+TGG - chr5_2:46544606-46544625 Msa0772240:intron 45.0%
!! ACCACTTTTGCCTCCATGTT+TGG + chr5_2:46544610-46544629 None:intergenic 45.0%
TGGAGGCAAAAGTGGTAGAT+TGG - chr5_2:46544614-46544633 Msa0772240:intron 45.0%
GAAAAGGTTCAAGTGGCTTG+AGG + chr5_2:46544881-46544900 None:intergenic 45.0%
ACAGGCAGAAAAGGTTCAAG+TGG + chr5_2:46544888-46544907 None:intergenic 45.0%
AGCAACAAGACAGGCAGAAA+AGG + chr5_2:46544897-46544916 None:intergenic 45.0%
ACAGCTTCTAAATCAGCAGG+AGG + chr5_2:46545233-46545252 None:intergenic 45.0%
AGTGCCAAGGATGAAGAAGT+TGG - chr5_2:46550881-46550900 Msa0772240:CDS 45.0%
GTGCCAAGGATGAAGAAGTT+GGG - chr5_2:46550882-46550901 Msa0772240:CDS 45.0%
TGCCAAGGATGAAGAAGTTG+GGG - chr5_2:46550883-46550902 Msa0772240:CDS 45.0%
TTCTTGACCACAAATGCCAC+TGG + chr5_2:46545415-46545434 None:intergenic 45.0%
!! TATCGACTTCGTTGCTAAGC+AGG - chr5_2:46550964-46550983 Msa0772240:CDS 45.0%
TCTTCACCGACAAGATTCCA+AGG - chr5_2:46545632-46545651 Msa0772240:intron 45.0%
CACAGACCTTGGAATCTTGT+CGG + chr5_2:46545641-46545660 None:intergenic 45.0%
AAGATTCCAAGGTCTGTGAC+TGG - chr5_2:46545643-46545662 Msa0772240:intron 45.0%
AGATTCCAAGGTCTGTGACT+GGG - chr5_2:46545644-46545663 Msa0772240:intron 45.0%
! AGTTTCTGAGTTGCTTTCGG+AGG + chr5_2:46545675-46545694 None:intergenic 45.0%
!! ACTCTAAGGCATGCATAGTG+GGG - chr5_2:46551206-46551225 Msa0772240:CDS 45.0%
!! TAATAAATATAAATACTAAA+AGG - chr5_2:46544739-46544758 Msa0772240:intron 5.0%
!! TATATATATATATAACAAAA+TGG - chr5_2:46547246-46547265 Msa0772240:intron 5.0%
!! TTAATTAAATATTGTAAAAA+TGG - chr5_2:46548079-46548098 Msa0772240:intron 5.0%
!!! ATACATTTTTATTATTTTTT+TGG + chr5_2:46548484-46548503 None:intergenic 5.0%
!! ATAATAAATATAAATACTAA+AGG - chr5_2:46544738-46544757 Msa0772240:intron 5.0%
!! TAATAAATATAAATACTAAA+GGG - chr5_2:46544739-46544758 Msa0772240:intron 5.0%
TTCTTCCTGCATTGCTTCCC+TGG - chr5_2:46543052-46543071 Msa0772240:three_prime_UTR 50.0%
AATTTCGGCGAACCAGTACG+CGG - chr5_2:46543272-46543291 Msa0772240:intron 50.0%
ACATCGAGAAAAGGGTCGGT+CGG + chr5_2:46543460-46543479 None:intergenic 50.0%
GGGCTAAAACCCCATCATGA+GGG + chr5_2:46543504-46543523 None:intergenic 50.0%
AGGGCTAAAACCCCATCATG+AGG + chr5_2:46543505-46543524 None:intergenic 50.0%
GGTACTACTGGTGTGAGCAA+AGG - chr5_2:46543967-46543986 Msa0772240:intron 50.0%
! CTATGGTTGAGCTTTTGGCG+AGG - chr5_2:46544019-46544038 Msa0772240:intron 50.0%
GTCAATGCCGACAATATCGG+TGG + chr5_2:46544246-46544265 None:intergenic 50.0%
!! ATTGTCGGCATTGACAGCGA+AGG - chr5_2:46544251-46544270 Msa0772240:intron 50.0%
! GCATTGACAGCGAAGGCAAA+GGG - chr5_2:46544258-46544277 Msa0772240:intron 50.0%
! GCGAAGGCAAAGGGTGTAAA+TGG - chr5_2:46544267-46544286 Msa0772240:intron 50.0%
ATGACTGAGTCGGGTGCATT+AGG - chr5_2:46544526-46544545 Msa0772240:intron 50.0%
TGGAGCTAACAACCCTAGTG+AGG + chr5_2:46544590-46544609 None:intergenic 50.0%
AAAGCTCACCACTTCTGCCT+GGG + chr5_2:46544660-46544679 None:intergenic 50.0%
! AGTGGTGAGCTTTGGTTGAG+AGG - chr5_2:46544667-46544686 Msa0772240:intron 50.0%
! GTGGTGAGCTTTGGTTGAGA+GGG - chr5_2:46544668-46544687 Msa0772240:intron 50.0%
ACGGCGACATCCACTATTTC+AGG + chr5_2:46545269-46545288 None:intergenic 50.0%
!! ATAGTGGATGTCGCCGTTAC+AGG - chr5_2:46545272-46545291 Msa0772240:intron 50.0%
! TAGTGGATGTCGCCGTTACA+GGG - chr5_2:46545273-46545292 Msa0772240:intron 50.0%
AGTGCCAAGGATGAAGAAGC+TGG - chr5_2:46545382-46545401 Msa0772240:intron 50.0%
GTGCCAAGGATGAAGAAGCT+GGG - chr5_2:46545383-46545402 Msa0772240:intron 50.0%
TGCCAAGGATGAAGAAGCTG+GGG - chr5_2:46545384-46545403 Msa0772240:intron 50.0%
GGAGATTCCAGTGGCATTTG+TGG - chr5_2:46545405-46545424 Msa0772240:intron 50.0%
ATCTTCCCAGTCACAGACCT+TGG + chr5_2:46545652-46545671 None:intergenic 50.0%
! GTGGGCCATCCCTTTTATTG+TGG + chr5_2:46546512-46546531 None:intergenic 50.0%
AAGGGATGGCCCACAATACA+TGG - chr5_2:46546518-46546537 Msa0772240:intron 50.0%
AGGGATGGCCCACAATACAT+GGG - chr5_2:46546519-46546538 Msa0772240:intron 50.0%
ATGGCCCACAATACATGGGA+GGG - chr5_2:46546523-46546542 Msa0772240:intron 50.0%
CCTAATGTACTGAGCCGAGT+TGG + chr5_2:46547412-46547431 None:intergenic 50.0%
CCAACTCGGCTCAGTACATT+AGG - chr5_2:46547409-46547428 Msa0772240:intron 50.0%
AGACCCAATAGTCGTTGGTG+GGG + chr5_2:46547856-46547875 None:intergenic 50.0%
! GTGCGTTTGATGGTCAGGAT+AGG + chr5_2:46548368-46548387 None:intergenic 50.0%
! TAAGGGTGCGTTTGATGGTC+AGG + chr5_2:46548373-46548392 None:intergenic 50.0%
CGTTTGTCGAGCACTAAACG+TGG + chr5_2:46548424-46548443 None:intergenic 50.0%
GGTACTACTGGTGTGAGCAA+AGG - chr5_2:46543967-46543986 Msa0772240:intron 50.0%
! CTATGGTTGAGCTTTTGGCG+AGG - chr5_2:46544019-46544038 Msa0772240:intron 50.0%
GTCAATGCCGACAATATCGG+TGG + chr5_2:46544246-46544265 None:intergenic 50.0%
!! ATTGTCGGCATTGACAGCGA+AGG - chr5_2:46544251-46544270 Msa0772240:intron 50.0%
! GCATTGACAGCGAAGGCAAA+GGG - chr5_2:46544258-46544277 Msa0772240:intron 50.0%
! GCGAAGGCAAAGGGTGTAAA+TGG - chr5_2:46544267-46544286 Msa0772240:intron 50.0%
ATGACTGAGTCGGGTGCATT+AGG - chr5_2:46544526-46544545 Msa0772240:intron 50.0%
AAAGCTCACCACTTCTGCCT+GGG + chr5_2:46544660-46544679 None:intergenic 50.0%
! AGTGGTGAGCTTTGGTTGAG+AGG - chr5_2:46544667-46544686 Msa0772240:intron 50.0%
ACGGCGACATCCACTATTTC+AGG + chr5_2:46545269-46545288 None:intergenic 50.0%
!! ATAGTGGATGTCGCCGTTAC+AGG - chr5_2:46545272-46545291 Msa0772240:intron 50.0%
! TAGTGGATGTCGCCGTTACA+GGG - chr5_2:46545273-46545292 Msa0772240:intron 50.0%
CTCCCCAACTTCTTCATCCT+TGG + chr5_2:46550888-46550907 None:intergenic 50.0%
AGAAGTTGGGGAGATTCCAG+TGG - chr5_2:46550895-46550914 Msa0772240:CDS 50.0%
GGAGATTCCAGTGGCATTTG+TGG - chr5_2:46545405-46545424 Msa0772240:intron 50.0%
GCAGGTTGCTCCATTCAAGA+AGG - chr5_2:46551095-46551114 Msa0772240:CDS 50.0%
ATCTTCCCAGTCACAGACCT+TGG + chr5_2:46545652-46545671 None:intergenic 50.0%
TACGCGGATGTTCCGCGAAT+CGG - chr5_2:46543288-46543307 Msa0772240:intron 55.0%
!! GGCATTGACAGCGAAGGCAA+AGG - chr5_2:46544257-46544276 Msa0772240:intron 55.0%
! TCGGGTGCATTAGGAGCATG+CGG - chr5_2:46544535-46544554 Msa0772240:intron 55.0%
! TTTTTGCCCCCAGGCAGAAG+TGG - chr5_2:46544649-46544668 Msa0772240:intron 55.0%
AAGCTCACCACTTCTGCCTG+GGG + chr5_2:46544659-46544678 None:intergenic 55.0%
CAAAGCTCACCACTTCTGCC+TGG + chr5_2:46544661-46544680 None:intergenic 55.0%
CAGGCAGAAGTGGTGAGCTT+TGG - chr5_2:46544659-46544678 Msa0772240:intron 55.0%
CTCCCCAGCTTCTTCATCCT+TGG + chr5_2:46545389-46545408 None:intergenic 55.0%
AGAAGCTGGGGAGATTCCAG+TGG - chr5_2:46545396-46545415 Msa0772240:intron 55.0%
GCAGGTTGCGCCATTCAAGA+AGG - chr5_2:46545597-46545616 Msa0772240:intron 55.0%
GATGGCCCACAATACATGGG+AGG - chr5_2:46546522-46546541 Msa0772240:intron 55.0%
TCAGCCCCACCAACGACTAT+TGG - chr5_2:46547849-46547868 Msa0772240:intron 55.0%
CAGCCCCACCAACGACTATT+GGG - chr5_2:46547850-46547869 Msa0772240:intron 55.0%
GATGGTCAGGATAGGGAGAC+AGG + chr5_2:46548360-46548379 None:intergenic 55.0%
ACGTCGAGAAAAGGGTCGGT+CGG + chr5_2:46548953-46548972 None:intergenic 55.0%
GGGCTAAAACCCCATCACGA+GGG + chr5_2:46548997-46549016 None:intergenic 55.0%
AGGGCTAAAACCCCATCACG+AGG + chr5_2:46548998-46549017 None:intergenic 55.0%
!! GGCATTGACAGCGAAGGCAA+AGG - chr5_2:46544257-46544276 Msa0772240:intron 55.0%
! TCGGGTGCATTAGGAGCATG+CGG - chr5_2:46544535-46544554 Msa0772240:intron 55.0%
!!! AGTGGTGCTTTTTTGCCCCC+AGG - chr5_2:46550132-46550151 Msa0772240:intron 55.0%
! TTTTTGCCCCCAGGCAGAAG+TGG - chr5_2:46544649-46544668 Msa0772240:intron 55.0%
AAGCTCACCACTTCTGCCTG+GGG + chr5_2:46544659-46544678 None:intergenic 55.0%
CAAAGCTCACCACTTCTGCC+TGG + chr5_2:46544661-46544680 None:intergenic 55.0%
CAGGCAGAAGTGGTGAGCTT+TGG - chr5_2:46544659-46544678 Msa0772240:intron 55.0%
TTCGCGGAACATCCGCGTAC+TGG + chr5_2:46543287-46543306 None:intergenic 60.0%
CGAGAAAAGGGTCGGTCGGA+AGG + chr5_2:46543456-46543475 None:intergenic 60.0%
! AGTGGTGCGTTTTTGCCCCC+AGG - chr5_2:46544640-46544659 Msa0772240:intron 60.0%
AGCTCACCACTTCTGCCTGG+GGG + chr5_2:46544658-46544677 None:intergenic 60.0%
CGAGAAAAGGGTCGGTCGGA+AGG + chr5_2:46543456-46543475 None:intergenic 60.0%
AGCTCACCACTTCTGCCTGG+GGG + chr5_2:46544658-46544677 None:intergenic 60.0%
!! GGTTCGCGCGAACCGATTCG+CGG + chr5_2:46543303-46543322 None:intergenic 65.0%
GGGTCGGTCGGAAGGCTCCT+AGG + chr5_2:46543448-46543467 None:intergenic 70.0%
GGGTCGGTCGGAAGGCTCCT+AGG + chr5_2:46543448-46543467 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 46542917 46551708 46542917 ID=Msa0772240;Name=Msa0772240
chr5_2 mRNA 46542917 46551708 46542917 ID=Msa0772240-mRNA-1;Parent=Msa0772240;Name=Msa0772240-mRNA-1;_AED=0.23;_eAED=0.23;_QI=432|1|1|1|0.62|0.55|9|477|555
chr5_2 exon 46542917 46542986 46542917 ID=Msa0772240-mRNA-1:exon:13913;Parent=Msa0772240-mRNA-1
chr5_2 exon 46543051 46543222 46543051 ID=Msa0772240-mRNA-1:exon:13912;Parent=Msa0772240-mRNA-1
chr5_2 exon 46548649 46548740 46548649 ID=Msa0772240-mRNA-1:exon:13911;Parent=Msa0772240-mRNA-1
chr5_2 exon 46548768 46549024 46548768 ID=Msa0772240-mRNA-1:exon:13910;Parent=Msa0772240-mRNA-1
chr5_2 exon 46549139 46549241 46549139 ID=Msa0772240-mRNA-1:exon:13909;Parent=Msa0772240-mRNA-1
chr5_2 exon 46549331 46549398 46549331 ID=Msa0772240-mRNA-1:exon:13908;Parent=Msa0772240-mRNA-1
chr5_2 exon 46549518 46549663 46549518 ID=Msa0772240-mRNA-1:exon:13907;Parent=Msa0772240-mRNA-1
chr5_2 exon 46549919 46550108 46549919 ID=Msa0772240-mRNA-1:exon:13906;Parent=Msa0772240-mRNA-1
chr5_2 exon 46550230 46551708 46550230 ID=Msa0772240-mRNA-1:exon:13905;Parent=Msa0772240-mRNA-1
chr5_2 five_prime_UTR 46551277 46551708 46551277 ID=Msa0772240-mRNA-1:five_prime_utr;Parent=Msa0772240-mRNA-1
chr5_2 CDS 46550230 46551276 46550230 ID=Msa0772240-mRNA-1:cds;Parent=Msa0772240-mRNA-1
chr5_2 CDS 46549919 46550108 46549919 ID=Msa0772240-mRNA-1:cds;Parent=Msa0772240-mRNA-1
chr5_2 CDS 46549518 46549663 46549518 ID=Msa0772240-mRNA-1:cds;Parent=Msa0772240-mRNA-1
chr5_2 CDS 46549331 46549398 46549331 ID=Msa0772240-mRNA-1:cds;Parent=Msa0772240-mRNA-1
chr5_2 CDS 46549139 46549241 46549139 ID=Msa0772240-mRNA-1:cds;Parent=Msa0772240-mRNA-1
chr5_2 CDS 46548911 46549024 46548911 ID=Msa0772240-mRNA-1:cds;Parent=Msa0772240-mRNA-1
chr5_2 three_prime_UTR 46548768 46548910 46548768 ID=Msa0772240-mRNA-1:three_prime_utr;Parent=Msa0772240-mRNA-1
chr5_2 three_prime_UTR 46548649 46548740 46548649 ID=Msa0772240-mRNA-1:three_prime_utr;Parent=Msa0772240-mRNA-1
chr5_2 three_prime_UTR 46543051 46543222 46543051 ID=Msa0772240-mRNA-1:three_prime_utr;Parent=Msa0772240-mRNA-1
chr5_2 three_prime_UTR 46542917 46542986 46542917 ID=Msa0772240-mRNA-1:three_prime_utr;Parent=Msa0772240-mRNA-1
Gene Sequence

>Msa0772240

ATGGCTGCAAATTTAAACTATGACATGCCACAAAATACCATCACTCACCCTTCTTGGTATTCACCAAAAACCGGAATTTACAATAGTATACACTCTCCTAGGAGCCTTCCGACCGACCCTTTTCTCGATGTTGTATCGTTCATTTTTTCTCACCCTCATGATGGGGTTTTAGCCCTTATTGATTCCTCATCTGGAACTTCCATTTCTTACTCAAAGTTGTTACCTTTAGTCAAATCAATGGCTTCTGGTCTTCATAAAATGGGAGTTTCACAAGGTGACCTTGTTTTGCTTCTACTTCCAAATTCAATTTACTATCCCATTGTACTATTAGGTGTTATGTACCTAGGTGCTGTTGTTACACCATTGAATCCTCTTAGTAGTGTTGATGAAATTCGTAAGCAGGTTAATGACTGTGGTGTGAGTTTTGCTTTTACTATACCTGAAAATGTTAAGAAATTAGAACCACTAGGCATTCCTATTATTTCTGTGCCAGAAAATGAAAAGGATTCGATGAATGATTGTTTCTCATGTTTTTTTAACCTGATTTCTGGTAACTTTGTTTTGCCTCAAAATCTGGTTATTAAACAAGAAGACACTGCTGCTATATTGTTTTCTTCTGGTACTACTGGTGTGAGCAAAGGAGTTGTTTTAACTCATAGAAATCTTATTGCTATGGTTGAGCTTTTGGCGAGGTTTGAAACTTCTAAATATGAATGCTCTAGTTCCAAAAATGTGTATCTAGCTGTTTTGCCGATGTTCCATTTATATGGTTTATCTCTCTATGCTACGGGATTATTGTCATTGGGTTCTTCAATCGTTGTAATGAGAAAATTTGACATTGATGAGACTATTAGGGTGATCGATAAATATAAAGTTACACACTTTCATCTTGTTCCACCGATATTGTCGGCATTGACAGCGAAGGCAAAGGGTGTAAATGGAAGTAAGTTGCAGAGTTTGAGACAGGTCGGCTCTAGTGCAGCGCCTTTAAGCACAAAAGCTATAAATGATTTTGTCCAAGCTCTCCCTAATGTTGATTTTATACAGGTTTATGGAATGACTGAGTCGGGTGCATTAGGAGCATGCGGTTTCAATACAGAAAAATTTCGCAACTATTCCTCACTAGGGTTGTTAGCTCCAAACATGGAGGCAAAAGTGGTAGATTGGAATAGTGGTGCGTTTTTGCCCCCAGGCAGAAGTGGTGAGCTTTGGTTGAGAGGGCCTTCAATTATGAAAGGATACTTGAATAATAAGGAAGCTACAATGTCGACAATTGATAAAGATGGTTGGCTACATACTGGAGATATTGTTTATTTTGATCAAGATGGATATTTATATTTATTTGACCGCTTGAAAGAATTTATCAAATACAAGGGCTTTCAGATTCCTCCTGCTGATTTAGAAGCTGTGTTAATTTTGCATCCTGAAATAGTGGATGTCGCCGTTACAGGTGCCAAGGATGAAGAAGCTGGGGAGATTCCAGTGGCATTTGTGGTCAAGAAGGTTGGAAGTGTACTATCTCCAAAGGATGTTATCGATTTTGTTGCTAAGCAGGTTGCGCCATTCAAGAAGGTTCGCAAAGTGGTCTTCACCGACAAGATTCCAAGGTCTGTGACTGGGAAGATCCTCCGAAAGCAACTCAGAAACTGCTTGCCTTCTAAACTCTAA
Protein sequence

>Msa0772240

MAANLNYDMPQNTITHPSWYSPKTGIYNSIHSPRSLPTDPFLDVVSFIFSHPHDGVLALIDSSSGTSISYSKLLPLVKSMASGLHKMGVSQGDLVLLLLPNSIYYPIVLLGVMYLGAVVTPLNPLSSVDEIRKQVNDCGVSFAFTIPENVKKLEPLGIPIISVPENEKDSMNDCFSCFFNLISGNFVLPQNLVIKQEDTAAILFSSGTTGVSKGVVLTHRNLIAMVELLARFETSKYECSSSKNVYLAVLPMFHLYGLSLYATGLLSLGSSIVVMRKFDIDETIRVIDKYKVTHFHLVPPILSALTAKAKGVNGSKLQSLRQVGSSAAPLSTKAINDFVQALPNVDFIQVYGMTESGALGACGFNTEKFRNYSSLGLLAPNMEAKVVDWNSGAFLPPGRSGELWLRGPSIMKGYLNNKEATMSTIDKDGWLHTGDIVYFDQDGYLYLFDRLKEFIKYKGFQIPPADLEAVLILHPEIVDVAVTGAKDEEAGEIPVAFVVKKVGSVLSPKDVIDFVAKQVAPFKKVRKVVFTDKIPRSVTGKILRKQLRNCLPSKL*