AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0772470

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0772470 MtrunA17_Chr5g0402991 98.016 756 14 1 1 755 1 756 0.0 1536
Msa0772470 MtrunA17_Chr8g0374061 80.331 544 104 2 214 755 91 633 0.0 922
Msa0772470 MtrunA17_Chr1g0162561 59.227 569 209 7 198 757 169 723 0.0 673
Msa0772470 MtrunA17_Chr6g0479291 46.424 769 359 13 6 749 39 779 0.0 655
Msa0772470 MtrunA17_Chr5g0410081 54.325 578 239 10 192 755 125 691 0.0 603
Msa0772470 MtrunA17_Chr1g0151141 32.472 271 135 12 496 758 39 269 1.10e-22 101
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0772470 AT2G23460.1 64.482 763 230 11 9 756 11 747 0.0 944
Msa0772470 AT1G31930.5 57.854 522 206 7 239 751 176 692 0.0 610
Msa0772470 AT1G31930.2 57.854 522 206 7 239 751 176 692 0.0 610
Msa0772470 AT1G31930.3 57.854 522 206 7 239 751 176 692 0.0 610
Msa0772470 AT1G31930.6 57.854 522 206 7 239 751 176 692 0.0 610
Msa0772470 AT1G31930.1 57.854 522 206 7 239 751 176 692 0.0 610
Msa0772470 AT1G31930.4 57.854 522 206 7 239 751 176 692 0.0 610
Msa0772470 AT4G34390.1 55.832 523 210 7 233 755 208 709 0.0 580
Msa0772470 AT4G34390.2 50.669 523 198 6 233 755 208 670 3.76e-166 500
Msa0772470 AT2G26300.2 30.435 253 136 10 496 748 38 250 4.43e-21 96.7
Msa0772470 AT2G26300.1 30.435 253 136 10 496 748 38 250 4.43e-21 96.7

Find 223 sgRNAs with CRISPR-Local

Find 444 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGATAAAGTATCTGGATTT+TGG 0.116823 5_2:+46844438 Msa0772470:CDS
CACCATTGATTGAGGAATTA+TGG 0.178386 5_2:+46847995 Msa0772470:CDS
TCTTTCATATGTTGCCTTAA+TGG 0.181603 5_2:-46848028 None:intergenic
CGAAGCTAATTCGAGTTCTT+TGG 0.207793 5_2:-46843577 None:intergenic
TTTAGGCTGTCAAAATATTA+AGG 0.241828 5_2:+46848237 Msa0772470:intron
CCGATTTGGGTGATTCTTCC+AGG 0.244908 5_2:+46843745 Msa0772470:CDS
GAGTCGAATAGAGCAAATTT+AGG 0.247961 5_2:+46844215 Msa0772470:CDS
CCGTGGCTAGACCGGTTAAA+AGG 0.256128 5_2:+46844012 Msa0772470:CDS
TGGAGAACAACACTCCAATT+TGG 0.277805 5_2:+46845082 Msa0772470:CDS
TACTGATCAATATGATTCTT+TGG 0.282854 5_2:+46848379 Msa0772470:CDS
TCCGGTGAATTAAGTAGTTC+TGG 0.289133 5_2:+46843672 Msa0772470:CDS
ATTAACGTCTGCGAACTTTC+CGG 0.296106 5_2:+46843654 Msa0772470:CDS
TTTCCCGGCTTAAGCTTCTT+TGG 0.304131 5_2:-46844407 None:intergenic
ATGGAATGATGCTGCCATTA+AGG 0.308636 5_2:+46848014 Msa0772470:CDS
TATTGGTATGATAAAGTATC+TGG 0.309152 5_2:+46844431 Msa0772470:CDS
TTGGTTGGTTGCAGTGGATC+TGG 0.312530 5_2:+46845158 Msa0772470:CDS
AATTGATCTGCTAGCCAAAT+TGG 0.321049 5_2:-46845096 None:intergenic
CTTCTGTCCCTCTTCTTGAT+AGG 0.324987 5_2:-46844880 None:intergenic
CCGAATTACATTTGTGTGAA+TGG 0.334076 5_2:+46844332 Msa0772470:CDS
CCTTTCTTTCCCTTGGTTAA+CGG 0.335879 5_2:-46844038 None:intergenic
GGAATTGAATCAACAAGATT+GGG 0.340373 5_2:+46843830 Msa0772470:CDS
CTCCGAAACTCTCTCTTTAC+CGG 0.341772 5_2:+46843482 Msa0772470:CDS
AGTTTCCTCAGGAGCTGATT+GGG 0.348178 5_2:-46848348 None:intergenic
AACTAGAAGCTCTAGTACTA+TGG 0.353152 5_2:+46843809 Msa0772470:CDS
TTAAATTAGAATCATGTTGC+CGG 0.353358 5_2:+46843338 Msa0772470:exon
CACTAAACTCCGGCGAATCT+AGG 0.364546 5_2:+46843550 Msa0772470:CDS
ACTGTCTTATCATCGGGTTT+TGG 0.369235 5_2:-46847868 None:intergenic
CCATTCACACAAATGTAATT+CGG 0.372818 5_2:-46844332 None:intergenic
GGCTGAAAGCATTCTCTGAT+TGG 0.372901 5_2:+46847908 Msa0772470:CDS
GATTTGGTGAAAGGAATAAT+AGG 0.377670 5_2:-46843233 None:intergenic
TACTGATAAAGAGGTTTGTT+TGG 0.380613 5_2:+46844094 Msa0772470:CDS
AACCATGGCATCGGGCAAAC+TGG 0.381217 5_2:+46847939 Msa0772470:CDS
GAAGGAGTTACTTCATCAAA+TGG 0.382058 5_2:+46848299 Msa0772470:CDS
CTTCTCTTGGTTGGTTGCAG+TGG 0.383063 5_2:+46845152 Msa0772470:CDS
TGGAATTGAATCAACAAGAT+TGG 0.385924 5_2:+46843829 Msa0772470:CDS
ATTTGCGAGAAGGAAGGATT+TGG 0.386067 5_2:-46843249 None:intergenic
CAGAGAATGCTTTCAGCCTT+GGG 0.387760 5_2:-46847903 None:intergenic
AGAAAATGTGTTACTTGCAT+TGG 0.397374 5_2:+46844179 Msa0772470:CDS
TTATCATACCAATAGTTTCC+CGG 0.397472 5_2:-46844422 None:intergenic
GACGGTGATGGGAACAGCTC+GGG 0.400516 5_2:-46843418 None:intergenic
TCAGAGAATGCTTTCAGCCT+TGG 0.401769 5_2:-46847904 None:intergenic
AGAGAATTCGAGGATTTAGA+AGG 0.402634 5_2:-46845059 None:intergenic
TGGGAAACCACTTTCTTATG+AGG 0.406670 5_2:+46844352 Msa0772470:CDS
CGAATTACATTTGTGTGAAT+GGG 0.409730 5_2:+46844333 Msa0772470:CDS
ATATGAAAGAAGAAGTGAAT+TGG 0.412863 5_2:+46848041 Msa0772470:CDS
AATTGTGTGCTTAGAGCAAT+GGG 0.415250 5_2:+46844140 Msa0772470:CDS
AGAATACACGAGGGTACATA+TGG 0.419518 5_2:+46844901 Msa0772470:CDS
AGTCGAATAGAGCAAATTTA+GGG 0.422823 5_2:+46844216 Msa0772470:CDS
CAGATGGGCACTAATGATAC+TGG 0.425469 5_2:-46844586 None:intergenic
TACCTTGGCATGCTCCTTGA+GGG 0.426333 5_2:+46846048 Msa0772470:CDS
CAAAGAACTCGAATTAGCTT+CGG 0.427582 5_2:+46843578 Msa0772470:CDS
TCTAAATCCTCGAATTCTCT+TGG 0.429006 5_2:+46845062 Msa0772470:CDS
GGTCGCCGCCGTCGTTTCCC+AGG 0.437454 5_2:+46843452 Msa0772470:CDS
TAGAATCATGTTGCCGGCGC+CGG 0.438351 5_2:+46843344 Msa0772470:exon
TTCGAGGATTTAGAAGGAAC+TGG 0.441168 5_2:-46845053 None:intergenic
CAGTTTCCTCAGGAGCTGAT+TGG 0.441392 5_2:-46848349 None:intergenic
TTGTGATGGTAAACGTGTTC+CGG 0.442420 5_2:+46843920 Msa0772470:CDS
AGAGTGCATGCAAGGGGACT+TGG 0.443170 5_2:+46848837 Msa0772470:CDS
TGCTTTCAGCCTTGGGCCAA+TGG 0.444880 5_2:-46847896 None:intergenic
CAAATTTAGGGAAATGTTCT+CGG 0.446219 5_2:+46844228 Msa0772470:CDS
GGTAAGAGAGGTTGCACAAC+CGG 0.446316 5_2:-46843501 None:intergenic
CCCGGCTTAAGCTTCTTTGG+AGG 0.446727 5_2:-46844404 None:intergenic
GGACCGTTTGATTTCTCAAA+CGG 0.447077 5_2:+46843693 Msa0772470:CDS
TTCCGTTGCTAGCATCTGGC+TGG 0.448005 5_2:-46844626 None:intergenic
GAATATACTGTCTTATCATC+GGG 0.448701 5_2:-46847874 None:intergenic
GTGCTCTAAGCTCCTTTGCA+TGG 0.453551 5_2:-46843530 None:intergenic
TAAGCGATTGCTTAATCAGT+TGG 0.454970 5_2:+46844256 Msa0772470:CDS
CATCACCGTCGACAACATTC+CGG 0.457109 5_2:+46843431 Msa0772470:CDS
CGTGGCTAGACCGGTTAAAA+GGG 0.465631 5_2:+46844013 Msa0772470:CDS
GATGTTTGAGGATGTTGAAA+TGG 0.467337 5_2:+46848881 Msa0772470:CDS
AGTGGAGCTTCGAATGTTGC+AGG 0.467777 5_2:+46844686 Msa0772470:CDS
ATCAAATGGGTTGGCTTGTG+TGG 0.471325 5_2:+46848313 Msa0772470:CDS
GTTGCTAGCATCTGGCTGGA+TGG 0.473441 5_2:-46844622 None:intergenic
TCGAAAGCAATAACAGAAGT+TGG 0.475935 5_2:-46843615 None:intergenic
CGGAATGTTGTCGACGGTGA+TGG 0.476319 5_2:-46843430 None:intergenic
GTGTTTCCGTTGCTAGCATC+TGG 0.477436 5_2:-46844630 None:intergenic
CCTGGAAGAATCACCCAAAT+CGG 0.478277 5_2:-46843745 None:intergenic
TCGACGGCGAAGGAATATTC+CGG 0.478385 5_2:-46843363 None:intergenic
TGGGAAACGACGGCGGCGAC+CGG 0.478480 5_2:-46843450 None:intergenic
ACACGACCCTTTCTTTCCCT+TGG 0.479186 5_2:-46844045 None:intergenic
CCGTTAACCAAGGGAAAGAA+AGG 0.480499 5_2:+46844038 Msa0772470:CDS
TATTGGCAGATTTAACGAAA+AGG 0.480588 5_2:+46846094 Msa0772470:CDS
TTCCATAATTCCTCAATCAA+TGG 0.481316 5_2:-46847997 None:intergenic
GAATAGGTTTACTGATAAAG+AGG 0.482182 5_2:+46844085 Msa0772470:CDS
TTGTTCTCCAAGAGAATTCG+AGG 0.483850 5_2:-46845069 None:intergenic
CCGGCTTAAGCTTCTTTGGA+GGG 0.483947 5_2:-46844403 None:intergenic
AATAGTTCAGAAGCTTCTCT+TGG 0.488325 5_2:+46845139 Msa0772470:CDS
TCATGCTCATCTTCTGAGAA+GGG 0.490277 5_2:-46845988 None:intergenic
GCAGTGCTGCTGCATAGATT+AGG 0.490333 5_2:-46843190 None:intergenic
GGAATATACTGTCTTATCAT+CGG 0.491007 5_2:-46847875 None:intergenic
GAATGAGGAGTTTGAAGTTG+AGG 0.492066 5_2:+46843986 Msa0772470:CDS
CGAATTAGCTTCGGAGAGAA+CGG 0.492103 5_2:+46843587 Msa0772470:CDS
AGCTTAAGCCGGGAAACTAT+TGG 0.493726 5_2:+46844414 Msa0772470:CDS
GGTTGATTCTTCGAGCAACC+TGG 0.495131 5_2:-46843763 None:intergenic
CAGTGCTGCTGCATAGATTA+GGG 0.498692 5_2:-46843189 None:intergenic
TTGCTGAAAACCATGGCATC+GGG 0.499428 5_2:+46847931 Msa0772470:CDS
TGAGGAAACCGTGGCTAGAC+CGG 0.502344 5_2:+46844004 Msa0772470:CDS
TTCCAGTTTGCCCGATGCCA+TGG 0.502445 5_2:-46847941 None:intergenic
TCTACTGCTCGGCAACTCAC+TGG 0.503778 5_2:-46843787 None:intergenic
CTACCTTGGCATGCTCCTTG+AGG 0.504052 5_2:+46846047 Msa0772470:CDS
GGAATGTTGTCGACGGTGAT+GGG 0.506970 5_2:-46843429 None:intergenic
GGAATTGAAAATGAAATCTC+CGG 0.507401 5_2:+46843714 Msa0772470:CDS
TTGCTAGCATCTGGCTGGAT+GGG 0.507439 5_2:-46844621 None:intergenic
CCCTCCAAAGAAGCTTAAGC+CGG 0.509236 5_2:+46844403 Msa0772470:CDS
GAGTTTCGGAGAGAGGAACC+TGG 0.509558 5_2:-46843470 None:intergenic
TTCATGCTCATCTTCTGAGA+AGG 0.512180 5_2:-46845989 None:intergenic
GTTCAGAAGCTTCTCTTGGT+TGG 0.512527 5_2:+46845143 Msa0772470:CDS
AAGGAGTTACTTCATCAAAT+GGG 0.513182 5_2:+46848300 Msa0772470:CDS
TAGAAGGAACTGGCAGGGAC+AGG 0.515298 5_2:-46845043 None:intergenic
TAATTGTGTGCTTAGAGCAA+TGG 0.517419 5_2:+46844139 Msa0772470:CDS
ATTCCGTTTGAGAAATCAAA+CGG 0.517756 5_2:-46843696 None:intergenic
TCTTCCGTGCTTGATACAAC+AGG 0.518772 5_2:+46846120 Msa0772470:CDS
ACTAATTCCTCATAAGAAAG+TGG 0.520411 5_2:-46844359 None:intergenic
GGTGTAAACATTGCTCTGAA+TGG 0.520429 5_2:-46846025 None:intergenic
ATTCCGTGCTCAAGGTAGTC+GGG 0.520431 5_2:-46845119 None:intergenic
AACTGATTAGAGTGCATGCA+AGG 0.522285 5_2:+46848829 Msa0772470:CDS
AACGAAGAAACACGCGTCGA+TGG 0.523016 5_2:-46843885 None:intergenic
ATTAGTGCCCATCTGAATGT+TGG 0.525816 5_2:+46844594 Msa0772470:CDS
AGTTACTTCATCAAATGGGT+TGG 0.526087 5_2:+46848304 Msa0772470:CDS
ATTGGAATTTGCGAGAAGGA+AGG 0.526782 5_2:-46843255 None:intergenic
ACTAAACTCCGGCGAATCTA+GGG 0.527062 5_2:+46843551 Msa0772470:CDS
GCGATTGCTTAATCAGTTGG+AGG 0.528250 5_2:+46844259 Msa0772470:CDS
ACCCAAATCGGAAAACTCGC+CGG 0.529421 5_2:-46843733 None:intergenic
ATAATAGGTTGTTTGTTCAG+TGG 0.530028 5_2:-46843218 None:intergenic
TGCCACTTATTTCTTAGAGC+GGG 0.530139 5_2:+46848080 Msa0772470:CDS
AAGAAATAAGTGGCAACACT+AGG 0.530699 5_2:-46848072 None:intergenic
AGAAGGAAGGATTTGGTGAA+AGG 0.534741 5_2:-46843242 None:intergenic
TGGTCGTGAAATAACAAAAG+TGG 0.538750 5_2:+46844668 Msa0772470:CDS
TGAATATGCACCATTGATTG+AGG 0.542232 5_2:+46847987 Msa0772470:CDS
GTTGCTGAAAACCATGGCAT+CGG 0.543324 5_2:+46847930 Msa0772470:CDS
TACCCGCTCTAAGAAATAAG+TGG 0.545269 5_2:-46848082 None:intergenic
ATCAATATGATTCTTTGGCT+AGG 0.545445 5_2:+46848384 Msa0772470:CDS
TTGGCAGGAGTTCAGACTGC+TGG 0.546102 5_2:+46844825 Msa0772470:CDS
CATGCTCATCTTCTGAGAAG+GGG 0.548014 5_2:-46845987 None:intergenic
AGGATTTAGAAGGAACTGGC+AGG 0.549346 5_2:-46845049 None:intergenic
AGCTCCTTTGCATGGTGCGG+TGG 0.551515 5_2:-46843522 None:intergenic
GCGAAGGAATATTCCGGCGC+CGG 0.552062 5_2:-46843357 None:intergenic
AACCGGTAAAGAGAGAGTTT+CGG 0.554457 5_2:-46843484 None:intergenic
TGGGACTTCCAACATTCAGA+TGG 0.554847 5_2:-46844602 None:intergenic
CAGGAAAGCGCATACAAGCT+TGG 0.555070 5_2:-46845024 None:intergenic
TTTGGAAACCCTAGATTCGC+CGG 0.555546 5_2:-46843559 None:intergenic
CGGGGAAGATCGTAAGTTAA+CGG 0.555864 5_2:-46843399 None:intergenic
GCATATTCACGAGTAGCAGC+AGG 0.561617 5_2:-46847973 None:intergenic
CGACGGTGATGGGAACAGCT+CGG 0.561746 5_2:-46843419 None:intergenic
TCCAGAACTACTTAATTCAC+CGG 0.563157 5_2:-46843673 None:intergenic
GATAAGACAGTATATTCCAT+TGG 0.565273 5_2:+46847880 Msa0772470:CDS
TCCGGCTGTTACGTTTGATG+TGG 0.566170 5_2:+46843938 Msa0772470:CDS
AAAGAGAGAGTTTCGGAGAG+AGG 0.567003 5_2:-46843477 None:intergenic
AACCAGTCACACTTGGTCAA+AGG 0.568433 5_2:-46849092 None:intergenic
CAAAACGCTCACGGCCCTCA+AGG 0.569570 5_2:-46846062 None:intergenic
TATTCCGTGCTCAAGGTAGT+CGG 0.569906 5_2:-46845120 None:intergenic
GTAGTGTCCACAGTTTCCTC+AGG 0.570253 5_2:-46848359 None:intergenic
GAATACACGAGGGTACATAT+GGG 0.570443 5_2:+46844902 Msa0772470:CDS
AGCAATGTTTACACCTACCT+TGG 0.571431 5_2:+46846033 Msa0772470:CDS
ATTTCCCCAATCAGCTCCTG+AGG 0.571766 5_2:+46848343 Msa0772470:CDS
AAGTAACTCCTTCAGCATAG+AGG 0.575567 5_2:-46848289 None:intergenic
TCCACATCAAACGTAACAGC+CGG 0.576597 5_2:-46843939 None:intergenic
AAGGACAGATTATGAACCCT+CGG 0.578262 5_2:+46848256 Msa0772470:CDS
CCTCCAAAGAAGCTTAAGCC+GGG 0.578957 5_2:+46844404 Msa0772470:CDS
GGAGGAGGATGATTTGAATG+AGG 0.580111 5_2:+46843971 Msa0772470:CDS
TCTGAACTATTCCGTGCTCA+AGG 0.585937 5_2:-46845127 None:intergenic
AGTTTCGGAGAGAGGAACCT+GGG 0.588341 5_2:-46843469 None:intergenic
GCGTGTTTCTTCGTTGAAAG+CGG 0.589591 5_2:+46843893 Msa0772470:CDS
TGTGGAATCTGATGAGGAGG+AGG 0.589985 5_2:+46843956 Msa0772470:CDS
TTAGATATCCTCTATGCTGA+AGG 0.590164 5_2:+46848281 Msa0772470:CDS
CGGTGGTCCGTCGTATTCGA+CGG 0.592147 5_2:-46843379 None:intergenic
GTTTCCTCAGGAGCTGATTG+GGG 0.595473 5_2:-46848347 None:intergenic
ACGGTGATGGGAACAGCTCG+GGG 0.599437 5_2:-46843417 None:intergenic
ATCAGCTCCTGAGGAAACTG+TGG 0.604427 5_2:+46848352 Msa0772470:CDS
CTTACCACCGCACCATGCAA+AGG 0.605994 5_2:+46843518 Msa0772470:CDS
GATTATTGGAATTTGCGAGA+AGG 0.609045 5_2:-46843259 None:intergenic
GAGCTTCTAGTTCTACTGCT+CGG 0.609125 5_2:-46843798 None:intergenic
GAGAGGAACCTGGGAAACGA+CGG 0.609622 5_2:-46843460 None:intergenic
CTAAGCTCCTTTGCATGGTG+CGG 0.610075 5_2:-46843525 None:intergenic
ATCCAGCCAGATGCTAGCAA+CGG 0.612211 5_2:+46844624 Msa0772470:CDS
AAACTGATCATAGTCACTCA+AGG 0.614491 5_2:-46848919 None:intergenic
GGCCCTCAAGGAGCATGCCA+AGG 0.616105 5_2:-46846050 None:intergenic
TGTTTCTTCGTTGAAAGCGG+AGG 0.617066 5_2:+46843896 Msa0772470:CDS
TTGCCACTTATTTCTTAGAG+CGG 0.617701 5_2:+46848079 Msa0772470:CDS
ACTGATTAGAGTGCATGCAA+GGG 0.618317 5_2:+46848830 Msa0772470:CDS
CTCAAGGAGCATGCCAAGGT+AGG 0.619156 5_2:-46846046 None:intergenic
GAATTGAATCAACAAGATTG+GGG 0.619486 5_2:+46843831 Msa0772470:CDS
TTGAAAGCGGAGGATTGTGA+TGG 0.620842 5_2:+46843906 Msa0772470:CDS
TTTCATCCTCAAAACGCTCA+CGG 0.621945 5_2:-46846071 None:intergenic
TAAAAGGGAGCCGTTAACCA+AGG 0.622505 5_2:+46844028 Msa0772470:CDS
GATGGTTCCTATCAAGAAGA+GGG 0.624494 5_2:+46844873 Msa0772470:CDS
TTCACACAAATGTAATTCGG+TGG 0.626047 5_2:-46844329 None:intergenic
ATAGAGGATATCTAAATCCG+AGG 0.633673 5_2:-46848273 None:intergenic
TAGAGGATATCTAAATCCGA+GGG 0.634427 5_2:-46848272 None:intergenic
GGGACTTCCAACATTCAGAT+GGG 0.634439 5_2:-46844601 None:intergenic
CAGTATATTCCATTGGCCCA+AGG 0.636114 5_2:+46847887 Msa0772470:CDS
AAAAGGGAGCCGTTAACCAA+GGG 0.636126 5_2:+46844029 Msa0772470:CDS
GGATGGTTCCTATCAAGAAG+AGG 0.636310 5_2:+46844872 Msa0772470:CDS
CGTTAACCAAGGGAAAGAAA+GGG 0.637411 5_2:+46844039 Msa0772470:CDS
GCATGGTGCGGTGGTAAGAG+AGG 0.637498 5_2:-46843513 None:intergenic
GGCGACCGGAATGTTGTCGA+CGG 0.637505 5_2:-46843436 None:intergenic
TCCTTCGCCGTCGAATACGA+CGG 0.638859 5_2:+46843372 Msa0772470:CDS
AGGAACCTGGGAAACGACGG+CGG 0.639571 5_2:-46843457 None:intergenic
GAGCTTAGAGCACTAAACTC+CGG 0.641480 5_2:+46843540 Msa0772470:CDS
GGATTTAGAAGGAACTGGCA+GGG 0.645881 5_2:-46845048 None:intergenic
ACGAGGGTACATATGGGGAA+AGG 0.648651 5_2:+46844908 Msa0772470:CDS
CTGATTAGAGTGCATGCAAG+GGG 0.648822 5_2:+46848831 Msa0772470:CDS
ACTGCTCGGCAACTCACTGG+AGG 0.657434 5_2:-46843784 None:intergenic
TGGGCACTAATGATACTGGA+AGG 0.659596 5_2:-46844582 None:intergenic
TGCTAGCAACGGAAACACGC+AGG 0.660305 5_2:+46844635 Msa0772470:CDS
CTTACCTGTTGTATCAAGCA+CGG 0.661114 5_2:-46846124 None:intergenic
GACTTGGAGAAAATTGCAAG+TGG 0.664084 5_2:+46848853 Msa0772470:CDS
TCCGTCGTATTCGACGGCGA+AGG 0.664513 5_2:-46843373 None:intergenic
GTTTGATGTGGAATCTGATG+AGG 0.664610 5_2:+46843950 Msa0772470:CDS
GCAATGGGGTCTATGCCAGA+AGG 0.665413 5_2:+46844155 Msa0772470:CDS
AATACACGAGGGTACATATG+GGG 0.672852 5_2:+46844903 Msa0772470:CDS
CAAGTGGCTAGAGATGTTTG+AGG 0.679722 5_2:+46848869 Msa0772470:CDS
AGGGTTCTGACAGTTCTGCA+AGG 0.686879 5_2:-46844384 None:intergenic
GTTTGAAGTTGAGGAAACCG+TGG 0.688361 5_2:+46843995 Msa0772470:CDS
ATTCCCGACTACCTTGAGCA+CGG 0.689758 5_2:+46845116 Msa0772470:CDS
GTTATTGCTTTCGATCACCG+TGG 0.692946 5_2:+46843624 Msa0772470:CDS
AGACGTTAATCTGCGAACCA+CGG 0.702567 5_2:-46843641 None:intergenic
TGATGTGGAATCTGATGAGG+AGG 0.705583 5_2:+46843953 Msa0772470:CDS
GAGGGACAGAAGAATACACG+AGG 0.713174 5_2:+46844891 Msa0772470:CDS
TGATTGGTTGCTGAAAACCA+TGG 0.719836 5_2:+46847924 Msa0772470:CDS
GGAAGATCGTAAGTTAACGG+TGG 0.724884 5_2:-46843396 None:intergenic
AGGGACAGAAGAATACACGA+GGG 0.782745 5_2:+46844892 Msa0772470:CDS
ATTGTGTGCTTAGAGCAATG+GGG 0.830581 5_2:+46844141 Msa0772470:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATAATTCTTAATAGA+GGG - chr5_2:46844753-46844772 None:intergenic 10.0%
!! ATATATATAATTCTTAATAG+AGG - chr5_2:46844754-46844773 None:intergenic 10.0%
!! AAATTAAGAAAAACAAATTT+GGG - chr5_2:46845313-46845332 None:intergenic 10.0%
!! TAAATTAAGAAAAACAAATT+TGG - chr5_2:46845314-46845333 None:intergenic 10.0%
!!! ACTTTTTCTTTATAATTATT+TGG + chr5_2:46848732-46848751 Msa0772470:intron 10.0%
!!! TTGTTTTTGTAAAAGATTAT+TGG - chr5_2:46843276-46843295 None:intergenic 15.0%
!!! TTTATTTCTTATTTATAGAC+AGG - chr5_2:46845464-46845483 None:intergenic 15.0%
!! GTAATGATAATTATTCTAAT+AGG + chr5_2:46847412-46847431 Msa0772470:intron 15.0%
!! ATCAAATTAATTGTAATTGT+TGG + chr5_2:46848153-46848172 Msa0772470:intron 15.0%
!! TCAAATTAATTGTAATTGTT+GGG + chr5_2:46848154-46848173 Msa0772470:intron 15.0%
!! AAAATGTTTAAGAAAAACAA+TGG + chr5_2:46848692-46848711 Msa0772470:intron 15.0%
!!! TTTTCTTTATAATTATTTGG+TGG + chr5_2:46848735-46848754 Msa0772470:intron 15.0%
!! TTGTTAAACAAAATTGTTGA+AGG + chr5_2:46844781-46844800 Msa0772470:intron 20.0%
!!! ACTATTTTATTTCAATTGCT+AGG + chr5_2:46844995-46845014 Msa0772470:intron 20.0%
!! AAATATATTGTATTCTAGCA+TGG + chr5_2:46845284-46845303 Msa0772470:intron 20.0%
!! AATATATTGTATTCTAGCAT+GGG + chr5_2:46845285-46845304 Msa0772470:intron 20.0%
!! AAATAAATGACCAAAATACA+AGG + chr5_2:46845477-46845496 Msa0772470:intron 20.0%
!! AGATACATTAGTCAATTAAA+TGG - chr5_2:46845547-46845566 None:intergenic 20.0%
!! AATTGACTAATGTATCTAAT+TGG + chr5_2:46845550-46845569 Msa0772470:intron 20.0%
!! CTATTTATAAAAGACAACTA+GGG - chr5_2:46845697-46845716 None:intergenic 20.0%
!!! CAAAGCAAATTTTGAATTAA+AGG + chr5_2:46845771-46845790 Msa0772470:intron 20.0%
!! CATAGTATTGCAAATATTTA+TGG + chr5_2:46845938-46845957 Msa0772470:intron 20.0%
!!! AACATGTCATATATTTCTAT+TGG + chr5_2:46846458-46846477 Msa0772470:intron 20.0%
!! ATAAAAAGTTATCATTGCAT+TGG - chr5_2:46846793-46846812 None:intergenic 20.0%
!! TTAAAGTAAAAGCAATACTT+TGG - chr5_2:46846856-46846875 None:intergenic 20.0%
!!! AAGTATTGCTTTTACTTTAA+TGG + chr5_2:46846856-46846875 Msa0772470:intron 20.0%
!! AAACTAACCAATAGTTAATA+AGG + chr5_2:46846880-46846899 Msa0772470:intron 20.0%
!! AAACTATCCTTATTAACTAT+TGG - chr5_2:46846890-46846909 None:intergenic 20.0%
!! AATAGTTAATAAGGATAGTT+TGG + chr5_2:46846889-46846908 Msa0772470:intron 20.0%
!!! TTATTTTTTCCAAACACTTA+AGG + chr5_2:46847083-46847102 Msa0772470:intron 20.0%
!! ATGATCTATGATAGAAATAT+TGG + chr5_2:46847164-46847183 Msa0772470:intron 20.0%
!! ATTAGTATTACTTTGTAACT+TGG - chr5_2:46847339-46847358 None:intergenic 20.0%
!! AATTGAAATTTCAATACAGA+AGG + chr5_2:46847777-46847796 Msa0772470:intron 20.0%
!! TTATGATTATGATTTACTAC+AGG + chr5_2:46847838-46847857 Msa0772470:intron 20.0%
!! TAGCAACTAACAATAAAAAA+TGG - chr5_2:46848112-46848131 None:intergenic 20.0%
!!! TTCTTAAACATTTTATAGTG+AGG - chr5_2:46848686-46848705 None:intergenic 20.0%
!! CAAATTTATTCAATATCAAC+AGG - chr5_2:46849043-46849062 None:intergenic 20.0%
!!! GAATAAATTTGATCTTTTTG+AGG + chr5_2:46849052-46849071 Msa0772470:intron 20.0%
! TTAAATTAGAATCATGTTGC+CGG + chr5_2:46843338-46843357 Msa0772470:exon 25.0%
!! TATTGGTATGATAAAGTATC+TGG + chr5_2:46844431-46844450 Msa0772470:CDS 25.0%
!!! ATGATAAAGTATCTGGATTT+TGG + chr5_2:46844438-46844457 Msa0772470:CDS 25.0%
!!! TGATAAAGTATCTGGATTTT+GGG + chr5_2:46844439-46844458 Msa0772470:CDS 25.0%
! ATGCTTCTTATGCTTAATAA+TGG + chr5_2:46844519-46844538 Msa0772470:intron 25.0%
! GCAATATATTATGACTATCT+AGG - chr5_2:46845388-46845407 None:intergenic 25.0%
! ATCTAATTGGATGAAAAAGA+TGG + chr5_2:46845563-46845582 Msa0772470:intron 25.0%
! CCTATTTATAAAAGACAACT+AGG - chr5_2:46845698-46845717 None:intergenic 25.0%
!! CCTAGTTGTCTTTTATAAAT+AGG + chr5_2:46845695-46845714 Msa0772470:intron 25.0%
!! TCTTTTATAAATAGGATCGT+AGG + chr5_2:46845703-46845722 Msa0772470:intron 25.0%
!! CTTTTATAAATAGGATCGTA+GGG + chr5_2:46845704-46845723 Msa0772470:intron 25.0%
! CGATAACTAATATCATAGAT+TGG + chr5_2:46845800-46845819 Msa0772470:intron 25.0%
! CAACTCATTCATATTACTTA+GGG + chr5_2:46846377-46846396 Msa0772470:intron 25.0%
!!! AAGTGACAATCATTTTGAAA+CGG - chr5_2:46846728-46846747 None:intergenic 25.0%
!! GAAAATGACAATCATTTTGA+AGG - chr5_2:46846765-46846784 None:intergenic 25.0%
!! CAGTTCTTTCTTTTAATCAT+TGG + chr5_2:46846920-46846939 Msa0772470:intron 25.0%
!! TTCAAAATGAATGTCGTTTA+AGG - chr5_2:46846969-46846988 None:intergenic 25.0%
!!! AAACGACATTCATTTTGAAA+CGG + chr5_2:46846970-46846989 Msa0772470:intron 25.0%
! TGCTAACTTAGAAGAAATAT+TGG + chr5_2:46847189-46847208 Msa0772470:intron 25.0%
! TGATACCATGATAGAAATAT+TGG + chr5_2:46847223-46847242 Msa0772470:intron 25.0%
! ATAATTATCATTACGAAACC+TGG - chr5_2:46847406-46847425 None:intergenic 25.0%
!! TTAGTTTCTTATGAAAGTGT+TGG + chr5_2:46847448-46847467 Msa0772470:intron 25.0%
!! TTTAAAGTTCGCTTTATAGT+TGG + chr5_2:46847591-46847610 Msa0772470:intron 25.0%
! ATATGCAACTAAATGATTGT+CGG + chr5_2:46847717-46847736 Msa0772470:intron 25.0%
!! CATTTATTCTAAAAGGTTGT+CGG + chr5_2:46847815-46847834 Msa0772470:intron 25.0%
! ATATGAAAGAAGAAGTGAAT+TGG + chr5_2:46848041-46848060 Msa0772470:CDS 25.0%
!!! TAACACAACACATTTTGTTT+AGG + chr5_2:46848220-46848239 Msa0772470:intron 25.0%
! TTTAGGCTGTCAAAATATTA+AGG + chr5_2:46848237-46848256 Msa0772470:intron 25.0%
! TACTGATCAATATGATTCTT+TGG + chr5_2:46848379-46848398 Msa0772470:CDS 25.0%
! AAACAATCATAACAGCAATT+GGG - chr5_2:46848497-46848516 None:intergenic 25.0%
! AAAACAATCATAACAGCAAT+TGG - chr5_2:46848498-46848517 None:intergenic 25.0%
!!! ACAAAAGCATTTTAATAGTG+AGG - chr5_2:46848643-46848662 None:intergenic 25.0%
! ATGTTTAAGAAAAACAATGG+AGG + chr5_2:46848695-46848714 Msa0772470:intron 25.0%
ATAATAGGTTGTTTGTTCAG+TGG - chr5_2:46843221-46843240 None:intergenic 30.0%
!! GATTTGGTGAAAGGAATAAT+AGG - chr5_2:46843236-46843255 None:intergenic 30.0%
! ATGAAAGCATGAGAGAAAAA+AGG - chr5_2:46843307-46843326 None:intergenic 30.0%
ATTCCGTTTGAGAAATCAAA+CGG - chr5_2:46843699-46843718 None:intergenic 30.0%
GGAATTGAAAATGAAATCTC+CGG + chr5_2:46843714-46843733 Msa0772470:CDS 30.0%
TGGAATTGAATCAACAAGAT+TGG + chr5_2:46843829-46843848 Msa0772470:CDS 30.0%
GGAATTGAATCAACAAGATT+GGG + chr5_2:46843830-46843849 Msa0772470:CDS 30.0%
GAATTGAATCAACAAGATTG+GGG + chr5_2:46843831-46843850 Msa0772470:CDS 30.0%
!! TCGTGTTATCGATGTTTTAA+GGG + chr5_2:46844062-46844081 Msa0772470:CDS 30.0%
GAATAGGTTTACTGATAAAG+AGG + chr5_2:46844085-46844104 Msa0772470:CDS 30.0%
! TACTGATAAAGAGGTTTGTT+TGG + chr5_2:46844094-46844113 Msa0772470:CDS 30.0%
!! AGAAAATGTGTTACTTGCAT+TGG + chr5_2:46844179-46844198 Msa0772470:CDS 30.0%
AGTCGAATAGAGCAAATTTA+GGG + chr5_2:46844216-46844235 Msa0772470:CDS 30.0%
CAAATTTAGGGAAATGTTCT+CGG + chr5_2:46844228-46844247 Msa0772470:CDS 30.0%
CCATTCACACAAATGTAATT+CGG - chr5_2:46844335-46844354 None:intergenic 30.0%
CGAATTACATTTGTGTGAAT+GGG + chr5_2:46844333-46844352 Msa0772470:CDS 30.0%
ACTAATTCCTCATAAGAAAG+TGG - chr5_2:46844362-46844381 None:intergenic 30.0%
TTATCATACCAATAGTTTCC+CGG - chr5_2:46844425-46844444 None:intergenic 30.0%
!! GATAAAGTATCTGGATTTTG+GGG + chr5_2:46844440-46844459 Msa0772470:CDS 30.0%
!! ATAAAGTATCTGGATTTTGG+GGG + chr5_2:46844441-46844460 Msa0772470:CDS 30.0%
GCATACAAATCAGAAATTCA+CGG - chr5_2:46844503-46844522 None:intergenic 30.0%
!! TTATGCTTAATAATGGATGC+TGG + chr5_2:46844526-46844545 Msa0772470:intron 30.0%
!!! TTAATAATGGATGCTGGTTT+TGG + chr5_2:46844532-46844551 Msa0772470:intron 30.0%
! TTGTTGAAGGAATTGTGTTT+TGG + chr5_2:46844794-46844813 Msa0772470:intron 30.0%
!! TTTTATTTCAATTGCTAGGC+TGG + chr5_2:46844999-46845018 Msa0772470:intron 30.0%
! GAGCAATACTTACTTTCTTT+TGG + chr5_2:46845251-46845270 Msa0772470:intron 30.0%
ACATTAATAAGAGTAAGCTC+TGG + chr5_2:46845338-46845357 Msa0772470:intron 30.0%
CATTAATAAGAGTAAGCTCT+GGG + chr5_2:46845339-46845358 Msa0772470:intron 30.0%
! AGCAATTTTTGCAAGATAGA+TGG - chr5_2:46845413-46845432 None:intergenic 30.0%
AATAAAACTCACAATGAAGC+AGG + chr5_2:46845598-46845617 Msa0772470:intron 30.0%
GTGCTATGTTTCTTATATTG+AGG + chr5_2:46845662-46845681 Msa0772470:intron 30.0%
! AAAATTTGCTTTGCTGAACA+TGG - chr5_2:46845764-46845783 None:intergenic 30.0%
!! TTGTTTTCGATTCTAGAAGT+GGG - chr5_2:46845883-46845902 None:intergenic 30.0%
!! TTTGTTTTCGATTCTAGAAG+TGG - chr5_2:46845884-46845903 None:intergenic 30.0%
GTATTGCAAATATTTATGGC+AGG + chr5_2:46845942-46845961 Msa0772470:intron 30.0%
! GATGCTTTTGTAAAGAATCT+TGG - chr5_2:46845968-46845987 None:intergenic 30.0%
TATTGGCAGATTTAACGAAA+AGG + chr5_2:46846094-46846113 Msa0772470:CDS 30.0%
!! GCTTTAAAAGGAAAATAGCA+TGG - chr5_2:46846215-46846234 None:intergenic 30.0%
TAAACATACCAGAAACTGTT+TGG - chr5_2:46846262-46846281 None:intergenic 30.0%
!! TATATTGTGCCACTTATCAA+GGG - chr5_2:46846355-46846374 None:intergenic 30.0%
!! TTATATTGTGCCACTTATCA+AGG - chr5_2:46846356-46846375 None:intergenic 30.0%
CCTAAGTAATATGAATGAGT+TGG - chr5_2:46846379-46846398 None:intergenic 30.0%
CCAACTCATTCATATTACTT+AGG + chr5_2:46846376-46846395 Msa0772470:intron 30.0%
CATATCATTACATAGACAAG+AGG - chr5_2:46846488-46846507 None:intergenic 30.0%
GATCCATATTTCATAGTAGA+CGG + chr5_2:46846538-46846557 Msa0772470:intron 30.0%
ATCCATATTTCATAGTAGAC+GGG + chr5_2:46846539-46846558 Msa0772470:intron 30.0%
ATTTGCCTTGTACATTAACT+CGG + chr5_2:46846618-46846637 Msa0772470:intron 30.0%
TGTGCATAGTATTAATTGGA+GGG - chr5_2:46846827-46846846 None:intergenic 30.0%
GTAGTGTGCATAGTATTAAT+TGG - chr5_2:46846831-46846850 None:intergenic 30.0%
TTGCATATTCCTTAAGTGTT+TGG - chr5_2:46847095-46847114 None:intergenic 30.0%
! ATGATAGTGAGCAAAATAGT+AGG + chr5_2:46847119-46847138 Msa0772470:intron 30.0%
ATCATATCCAATCAAACCTT+GGG - chr5_2:46847149-46847168 None:intergenic 30.0%
AATTTGTACCTTAACACACA+AGG - chr5_2:46847298-46847317 None:intergenic 30.0%
CAATTCTTAGTTAATGTGCA+AGG - chr5_2:46847515-46847534 None:intergenic 30.0%
!! TAGGATCTCTAAAGTTTGAT+TGG + chr5_2:46847748-46847767 Msa0772470:intron 30.0%
GTGCATCCATTTATTCTAAA+AGG + chr5_2:46847808-46847827 Msa0772470:intron 30.0%
!!! CGACAACCTTTTAGAATAAA+TGG - chr5_2:46847817-46847836 None:intergenic 30.0%
GAATATACTGTCTTATCATC+GGG - chr5_2:46847877-46847896 None:intergenic 30.0%
GGAATATACTGTCTTATCAT+CGG - chr5_2:46847878-46847897 None:intergenic 30.0%
GATAAGACAGTATATTCCAT+TGG + chr5_2:46847880-46847899 Msa0772470:CDS 30.0%
TTCCATAATTCCTCAATCAA+TGG - chr5_2:46848000-46848019 None:intergenic 30.0%
TCTTTCATATGTTGCCTTAA+TGG - chr5_2:46848031-46848050 None:intergenic 30.0%
AAGGAGTTACTTCATCAAAT+GGG + chr5_2:46848300-46848319 Msa0772470:CDS 30.0%
ATCAATATGATTCTTTGGCT+AGG + chr5_2:46848384-46848403 Msa0772470:CDS 30.0%
TGTTGTTATATCCTTGGAAT+GGG + chr5_2:46848455-46848474 Msa0772470:intron 30.0%
!! GTTATGATTGTTTTTCCTCT+TGG + chr5_2:46848504-46848523 Msa0772470:intron 30.0%
!! CTGATGATTTGTACTTCTTT+TGG + chr5_2:46848791-46848810 Msa0772470:intron 30.0%
!! ATGATTTGTACTTCTTTTGG+TGG + chr5_2:46848794-46848813 Msa0772470:intron 30.0%
AATTCCATTTGCTCAAAAGT+TGG - chr5_2:46849020-46849039 None:intergenic 30.0%
GATTATTGGAATTTGCGAGA+AGG - chr5_2:46843262-46843281 None:intergenic 35.0%
GCATGAGAGAAAAAAGGAAA+TGG - chr5_2:46843301-46843320 None:intergenic 35.0%
! CAAAGAACTCGAATTAGCTT+CGG + chr5_2:46843578-46843597 Msa0772470:CDS 35.0%
TCGAAAGCAATAACAGAAGT+TGG - chr5_2:46843618-46843637 None:intergenic 35.0%
TCCAGAACTACTTAATTCAC+CGG - chr5_2:46843676-46843695 None:intergenic 35.0%
! AACTAGAAGCTCTAGTACTA+TGG + chr5_2:46843809-46843828 Msa0772470:CDS 35.0%
! GTCGTGTTATCGATGTTTTA+AGG + chr5_2:46844061-46844080 Msa0772470:CDS 35.0%
!! CGTGTTATCGATGTTTTAAG+GGG + chr5_2:46844063-46844082 Msa0772470:CDS 35.0%
!!! ATCGATGTTTTAAGGGGAAT+AGG + chr5_2:46844069-46844088 Msa0772470:CDS 35.0%
TAATTGTGTGCTTAGAGCAA+TGG + chr5_2:46844139-46844158 Msa0772470:CDS 35.0%
AATTGTGTGCTTAGAGCAAT+GGG + chr5_2:46844140-46844159 Msa0772470:CDS 35.0%
! GTAACACATTTTCTACCTTC+TGG - chr5_2:46844173-46844192 None:intergenic 35.0%
GAGTCGAATAGAGCAAATTT+AGG + chr5_2:46844215-46844234 Msa0772470:CDS 35.0%
TAAGCGATTGCTTAATCAGT+TGG + chr5_2:46844256-46844275 Msa0772470:CDS 35.0%
TTCACACAAATGTAATTCGG+TGG - chr5_2:46844332-46844351 None:intergenic 35.0%
CCGAATTACATTTGTGTGAA+TGG + chr5_2:46844332-46844351 Msa0772470:CDS 35.0%
TGGTCGTGAAATAACAAAAG+TGG + chr5_2:46844668-46844687 Msa0772470:CDS 35.0%
! GGAAAGGTAACTTACCTTTT+TGG + chr5_2:46844924-46844943 Msa0772470:intron 35.0%
GAGACAAATACACTCCAAAA+AGG - chr5_2:46844941-46844960 None:intergenic 35.0%
!! CTTATTTTCTTCTAGCCCAA+CGG + chr5_2:46844960-46844979 Msa0772470:intron 35.0%
AGTATGTAGCAAATACCGTT+GGG - chr5_2:46844978-46844997 None:intergenic 35.0%
TAGTATGTAGCAAATACCGT+TGG - chr5_2:46844979-46844998 None:intergenic 35.0%
AGAGAATTCGAGGATTTAGA+AGG - chr5_2:46845062-46845081 None:intergenic 35.0%
TCTAAATCCTCGAATTCTCT+TGG + chr5_2:46845062-46845081 Msa0772470:CDS 35.0%
AATTGATCTGCTAGCCAAAT+TGG - chr5_2:46845099-46845118 None:intergenic 35.0%
AATAGTTCAGAAGCTTCTCT+TGG + chr5_2:46845139-46845158 Msa0772470:CDS 35.0%
!!! AACGAGCACTATTTTTAAGC+AGG + chr5_2:46845181-46845200 Msa0772470:CDS 35.0%
CAATGAAGCAGGTATGTAAA+AGG + chr5_2:46845609-46845628 Msa0772470:intron 35.0%
! GGAAATACTTGATGACAGAA+AGG - chr5_2:46845743-46845762 None:intergenic 35.0%
TCATAGATTGGCGTTATATC+TGG + chr5_2:46845812-46845831 Msa0772470:intron 35.0%
GCGTTATATCTGGTTATACA+TGG + chr5_2:46845822-46845841 Msa0772470:intron 35.0%
!! TGTTTTCGATTCTAGAAGTG+GGG - chr5_2:46845882-46845901 None:intergenic 35.0%
!!! GCGTTTTGAGGATGAAATAT+TGG + chr5_2:46846077-46846096 Msa0772470:CDS 35.0%
! TTTCAGAAAGAGAAGTGCAA+AGG - chr5_2:46846166-46846185 None:intergenic 35.0%
! CAACTAGATGGTGCTTTAAA+AGG - chr5_2:46846227-46846246 None:intergenic 35.0%
ACTAACATGTGACAACTAGA+TGG - chr5_2:46846239-46846258 None:intergenic 35.0%
ATGTTAGTCCAAACAGTTTC+TGG + chr5_2:46846251-46846270 Msa0772470:intron 35.0%
AACCCGTCTACTATGAAATA+TGG - chr5_2:46846544-46846563 None:intergenic 35.0%
!!! GACAATCATTTTGAAACGGA+GGG - chr5_2:46846724-46846743 None:intergenic 35.0%
!!! TGACAATCATTTTGAAACGG+AGG - chr5_2:46846725-46846744 None:intergenic 35.0%
GTGTGCATAGTATTAATTGG+AGG - chr5_2:46846828-46846847 None:intergenic 35.0%
!!! GACATTCATTTTGAAACGGA+GGG + chr5_2:46846974-46846993 Msa0772470:intron 35.0%
TGTTATCAATGTTGTGCTTC+CGG + chr5_2:46847034-46847053 Msa0772470:intron 35.0%
TTAACTAGTTGAGCATGAAC+CGG - chr5_2:46847056-46847075 None:intergenic 35.0%
GATCATATCCAATCAAACCT+TGG - chr5_2:46847150-46847169 None:intergenic 35.0%
! CACGACCAATATTTCTATCA+TGG - chr5_2:46847231-46847250 None:intergenic 35.0%
! TAGTACGTAACTGTTTCTTG+AGG + chr5_2:46847363-46847382 Msa0772470:intron 35.0%
TGCATATCAACTTGAGTGTT+TGG - chr5_2:46847704-46847723 None:intergenic 35.0%
ATGATTGTCGGCAAAATAGT+AGG + chr5_2:46847729-46847748 Msa0772470:intron 35.0%
! TGAATATGCACCATTGATTG+AGG + chr5_2:46847987-46848006 Msa0772470:CDS 35.0%
! CACCATTGATTGAGGAATTA+TGG + chr5_2:46847995-46848014 Msa0772470:CDS 35.0%
AAGAAATAAGTGGCAACACT+AGG - chr5_2:46848075-46848094 None:intergenic 35.0%
! TTGCCACTTATTTCTTAGAG+CGG + chr5_2:46848079-46848098 Msa0772470:CDS 35.0%
! TTATTTCTTAGAGCGGGTAA+AGG + chr5_2:46848086-46848105 Msa0772470:intron 35.0%
TTGACAATCTTGTACTGTTG+AGG + chr5_2:46848186-46848205 Msa0772470:intron 35.0%
TGACAATCTTGTACTGTTGA+GGG + chr5_2:46848187-46848206 Msa0772470:intron 35.0%
TAGAGGATATCTAAATCCGA+GGG - chr5_2:46848275-46848294 None:intergenic 35.0%
ATAGAGGATATCTAAATCCG+AGG - chr5_2:46848276-46848295 None:intergenic 35.0%
TTAGATATCCTCTATGCTGA+AGG + chr5_2:46848281-46848300 Msa0772470:CDS 35.0%
GAAGGAGTTACTTCATCAAA+TGG + chr5_2:46848299-46848318 Msa0772470:CDS 35.0%
AGTTACTTCATCAAATGGGT+TGG + chr5_2:46848304-46848323 Msa0772470:CDS 35.0%
ATATGATTCTTTGGCTAGGT+AGG + chr5_2:46848388-46848407 Msa0772470:intron 35.0%
TATGCCTGTTGTTATATCCT+TGG + chr5_2:46848449-46848468 Msa0772470:intron 35.0%
CATTCCAAGGATATAACAAC+AGG - chr5_2:46848456-46848475 None:intergenic 35.0%
CTGTTGTTATATCCTTGGAA+TGG + chr5_2:46848454-46848473 Msa0772470:intron 35.0%
TAACAGCAATTGGGTTAATC+AGG - chr5_2:46848488-46848507 None:intergenic 35.0%
!!! TACACGTGTTATTTTCCAAG+AGG - chr5_2:46848522-46848541 None:intergenic 35.0%
GGATGTAAATGCAAGTACAT+CGG + chr5_2:46848560-46848579 Msa0772470:intron 35.0%
GATGTAAATGCAAGTACATC+GGG + chr5_2:46848561-46848580 Msa0772470:intron 35.0%
ATGTAAATGCAAGTACATCG+GGG + chr5_2:46848562-46848581 Msa0772470:intron 35.0%
GGTTATGGTAGAATTGTAGT+TGG + chr5_2:46848584-46848603 Msa0772470:intron 35.0%
TAGTTGGAAGCTTATGAAGT+TGG + chr5_2:46848600-46848619 Msa0772470:intron 35.0%
GATGTTTGAGGATGTTGAAA+TGG + chr5_2:46848881-46848900 Msa0772470:CDS 35.0%
AAACTGATCATAGTCACTCA+AGG - chr5_2:46848922-46848941 None:intergenic 35.0%
! TATGATCAGTTTTCTGTCGA+TGG + chr5_2:46848930-46848949 Msa0772470:CDS 35.0%
! TCATCCAACTTTTGAGCAAA+TGG + chr5_2:46849013-46849032 Msa0772470:intron 35.0%
!! AGAAGGAAGGATTTGGTGAA+AGG - chr5_2:46843245-46843264 None:intergenic 40.0%
ATTTGCGAGAAGGAAGGATT+TGG - chr5_2:46843252-46843271 None:intergenic 40.0%
ATTGGAATTTGCGAGAAGGA+AGG - chr5_2:46843258-46843277 None:intergenic 40.0%
AACCGGTAAAGAGAGAGTTT+CGG - chr5_2:46843487-46843506 None:intergenic 40.0%
! CGAAGCTAATTCGAGTTCTT+TGG - chr5_2:46843580-46843599 None:intergenic 40.0%
ATTAACGTCTGCGAACTTTC+CGG + chr5_2:46843654-46843673 Msa0772470:CDS 40.0%
TCCGGTGAATTAAGTAGTTC+TGG + chr5_2:46843672-46843691 Msa0772470:CDS 40.0%
! GGACCGTTTGATTTCTCAAA+CGG + chr5_2:46843693-46843712 Msa0772470:CDS 40.0%
TTGTGATGGTAAACGTGTTC+CGG + chr5_2:46843920-46843939 Msa0772470:CDS 40.0%
GTTTGATGTGGAATCTGATG+AGG + chr5_2:46843950-46843969 Msa0772470:CDS 40.0%
! GAATGAGGAGTTTGAAGTTG+AGG + chr5_2:46843986-46844005 Msa0772470:CDS 40.0%
CCTTTCTTTCCCTTGGTTAA+CGG - chr5_2:46844041-46844060 None:intergenic 40.0%
CGTTAACCAAGGGAAAGAAA+GGG + chr5_2:46844039-46844058 Msa0772470:CDS 40.0%
ATTGTGTGCTTAGAGCAATG+GGG + chr5_2:46844141-46844160 Msa0772470:CDS 40.0%
TGGGAAACCACTTTCTTATG+AGG + chr5_2:46844352-46844371 Msa0772470:CDS 40.0%
!!! GTTTTGGTTTGTGTTTTCCC+AGG + chr5_2:46844548-46844567 Msa0772470:intron 40.0%
ATTAGTGCCCATCTGAATGT+TGG + chr5_2:46844594-46844613 Msa0772470:CDS 40.0%
! AACACGCAGGTTTTCGTTAA+TGG + chr5_2:46844648-46844667 Msa0772470:CDS 40.0%
!!! TTGTGTTTTGGTTGTGCAGT+TGG + chr5_2:46844806-46844825 Msa0772470:intron 40.0%
! TGCTGGTAACCCACATTTTT+GGG + chr5_2:46844842-46844861 Msa0772470:CDS 40.0%
CCTCATTGACCCAAAAATGT+GGG - chr5_2:46844854-46844873 None:intergenic 40.0%
TCCTCATTGACCCAAAAATG+TGG - chr5_2:46844855-46844874 None:intergenic 40.0%
!!! CATTTTTGGGTCAATGAGGA+TGG + chr5_2:46844855-46844874 Msa0772470:CDS 40.0%
GATGGTTCCTATCAAGAAGA+GGG + chr5_2:46844873-46844892 Msa0772470:CDS 40.0%
! AGAATACACGAGGGTACATA+TGG + chr5_2:46844901-46844920 Msa0772470:CDS 40.0%
! GAATACACGAGGGTACATAT+GGG + chr5_2:46844902-46844921 Msa0772470:CDS 40.0%
! AATACACGAGGGTACATATG+GGG + chr5_2:46844903-46844922 Msa0772470:CDS 40.0%
TTCGAGGATTTAGAAGGAAC+TGG - chr5_2:46845056-46845075 None:intergenic 40.0%
TTGTTCTCCAAGAGAATTCG+AGG - chr5_2:46845072-46845091 None:intergenic 40.0%
TGGAGAACAACACTCCAATT+TGG + chr5_2:46845082-46845101 Msa0772470:CDS 40.0%
! CAAGGTGGTTCCTTGTATTT+TGG - chr5_2:46845490-46845509 None:intergenic 40.0%
AATACAAGGAACCACCTTGA+AGG + chr5_2:46845491-46845510 Msa0772470:intron 40.0%
AGTAGCATTAACTGCCTTCA+AGG - chr5_2:46845508-46845527 None:intergenic 40.0%
! TCATGCTCATCTTCTGAGAA+GGG - chr5_2:46845991-46846010 None:intergenic 40.0%
! TTCATGCTCATCTTCTGAGA+AGG - chr5_2:46845992-46846011 None:intergenic 40.0%
! GGTGTAAACATTGCTCTGAA+TGG - chr5_2:46846028-46846047 None:intergenic 40.0%
AGCAATGTTTACACCTACCT+TGG + chr5_2:46846033-46846052 Msa0772470:CDS 40.0%
TTTCATCCTCAAAACGCTCA+CGG - chr5_2:46846074-46846093 None:intergenic 40.0%
CTTACCTGTTGTATCAAGCA+CGG - chr5_2:46846127-46846146 None:intergenic 40.0%
! AGAAAGAGAAGTGCAAAGGA+TGG - chr5_2:46846162-46846181 None:intergenic 40.0%
! TAGCATGTGAGTTGAATGCA+TGG + chr5_2:46846290-46846309 Msa0772470:intron 40.0%
AATGCATGGTTGAATCGTTG+TGG + chr5_2:46846304-46846323 Msa0772470:intron 40.0%
! TTTTTGACAAGTGCCTACTG+TGG + chr5_2:46846423-46846442 Msa0772470:intron 40.0%
TTTAACACTCAGTCCACAGT+AGG - chr5_2:46846439-46846458 None:intergenic 40.0%
GCAATCCGAGTTAATGTACA+AGG - chr5_2:46846626-46846645 None:intergenic 40.0%
!!! CGACATTCATTTTGAAACGG+AGG + chr5_2:46846973-46846992 Msa0772470:intron 40.0%
TTGAAACGGAGGGAGTAATT+CGG + chr5_2:46846984-46847003 Msa0772470:intron 40.0%
CAAAATAGTAGGATCTCCCA+AGG + chr5_2:46847130-46847149 Msa0772470:intron 40.0%
! ATCATGGTATCAGAGTGCTT+CGG - chr5_2:46847215-46847234 None:intergenic 40.0%
! CACTTAAGCCTTGTGTGTTA+AGG + chr5_2:46847287-46847306 Msa0772470:intron 40.0%
ACTTTGTAACTTGGCACACA+AGG - chr5_2:46847330-46847349 None:intergenic 40.0%
AATGTGCAAGGCAAAGAAAC+TGG - chr5_2:46847503-46847522 None:intergenic 40.0%
TTCCAATTCATGCTCTCAAC+TGG + chr5_2:46847659-46847678 Msa0772470:intron 40.0%
! TACCAGTTGAGAGCATGAAT+TGG - chr5_2:46847664-46847683 None:intergenic 40.0%
!!! CTTATCATCGGGTTTTGGAT+TGG - chr5_2:46847866-46847885 None:intergenic 40.0%
! ACTGTCTTATCATCGGGTTT+TGG - chr5_2:46847871-46847890 None:intergenic 40.0%
! TGATTGGTTGCTGAAAACCA+TGG + chr5_2:46847924-46847943 Msa0772470:CDS 40.0%
ATGGAATGATGCTGCCATTA+AGG + chr5_2:46848014-46848033 Msa0772470:CDS 40.0%
! TGCCACTTATTTCTTAGAGC+GGG + chr5_2:46848080-46848099 Msa0772470:CDS 40.0%
!! TACCCGCTCTAAGAAATAAG+TGG - chr5_2:46848085-46848104 None:intergenic 40.0%
AAGGACAGATTATGAACCCT+CGG + chr5_2:46848256-46848275 Msa0772470:CDS 40.0%
AAGTAACTCCTTCAGCATAG+AGG - chr5_2:46848292-46848311 None:intergenic 40.0%
!! TATATCCTTGGAATGGGTTG+TGG + chr5_2:46848461-46848480 Msa0772470:intron 40.0%
ATAACACGTGTAAAACTGCC+TGG + chr5_2:46848530-46848549 Msa0772470:intron 40.0%
TGTAAATGCAAGTACATCGG+GGG + chr5_2:46848563-46848582 Msa0772470:intron 40.0%
! AAAATGCTTTTGTTGAGCCC+TGG + chr5_2:46848650-46848669 Msa0772470:intron 40.0%
!! TACTTCTTTTGGTGGTTAGC+AGG + chr5_2:46848802-46848821 Msa0772470:intron 40.0%
AACTGATTAGAGTGCATGCA+AGG + chr5_2:46848829-46848848 Msa0772470:CDS 40.0%
ACTGATTAGAGTGCATGCAA+GGG + chr5_2:46848830-46848849 Msa0772470:CDS 40.0%
GACTTGGAGAAAATTGCAAG+TGG + chr5_2:46848853-46848872 Msa0772470:CDS 40.0%
! CAGTTTTCTGTCGATGGAAA+TGG + chr5_2:46848936-46848955 Msa0772470:CDS 40.0%
AAAAGTTGGATGAGTGGCAA+TGG - chr5_2:46849006-46849025 None:intergenic 40.0%
TTGCTCAAAAGTTGGATGAG+TGG - chr5_2:46849012-46849031 None:intergenic 40.0%
! CAGTGCTGCTGCATAGATTA+GGG - chr5_2:46843192-46843211 None:intergenic 45.0%
GGAAGATCGTAAGTTAACGG+TGG - chr5_2:46843399-46843418 None:intergenic 45.0%
CGGGGAAGATCGTAAGTTAA+CGG - chr5_2:46843402-46843421 None:intergenic 45.0%
AAAGAGAGAGTTTCGGAGAG+AGG - chr5_2:46843480-46843499 None:intergenic 45.0%
CTCCGAAACTCTCTCTTTAC+CGG + chr5_2:46843482-46843501 Msa0772470:CDS 45.0%
! GAGCTTAGAGCACTAAACTC+CGG + chr5_2:46843540-46843559 Msa0772470:CDS 45.0%
ACTAAACTCCGGCGAATCTA+GGG + chr5_2:46843551-46843570 Msa0772470:CDS 45.0%
TTTGGAAACCCTAGATTCGC+CGG - chr5_2:46843562-46843581 None:intergenic 45.0%
! CGAATTAGCTTCGGAGAGAA+CGG + chr5_2:46843587-46843606 Msa0772470:CDS 45.0%
GTTATTGCTTTCGATCACCG+TGG + chr5_2:46843624-46843643 Msa0772470:CDS 45.0%
AGACGTTAATCTGCGAACCA+CGG - chr5_2:46843644-46843663 None:intergenic 45.0%
CCTGGAAGAATCACCCAAAT+CGG - chr5_2:46843748-46843767 None:intergenic 45.0%
!! GAGCTTCTAGTTCTACTGCT+CGG - chr5_2:46843801-46843820 None:intergenic 45.0%
GCGTGTTTCTTCGTTGAAAG+CGG + chr5_2:46843893-46843912 Msa0772470:CDS 45.0%
TGTTTCTTCGTTGAAAGCGG+AGG + chr5_2:46843896-46843915 Msa0772470:CDS 45.0%
TTGAAAGCGGAGGATTGTGA+TGG + chr5_2:46843906-46843925 Msa0772470:CDS 45.0%
TCCACATCAAACGTAACAGC+CGG - chr5_2:46843942-46843961 None:intergenic 45.0%
TGATGTGGAATCTGATGAGG+AGG + chr5_2:46843953-46843972 Msa0772470:CDS 45.0%
GGAGGAGGATGATTTGAATG+AGG + chr5_2:46843971-46843990 Msa0772470:CDS 45.0%
! GTTTGAAGTTGAGGAAACCG+TGG + chr5_2:46843995-46844014 Msa0772470:CDS 45.0%
! GTTAACGGCTCCCTTTTAAC+CGG - chr5_2:46844026-46844045 None:intergenic 45.0%
TAAAAGGGAGCCGTTAACCA+AGG + chr5_2:46844028-46844047 Msa0772470:CDS 45.0%
AAAAGGGAGCCGTTAACCAA+GGG + chr5_2:46844029-46844048 Msa0772470:CDS 45.0%
CCGTTAACCAAGGGAAAGAA+AGG + chr5_2:46844038-46844057 Msa0772470:CDS 45.0%
GCGATTGCTTAATCAGTTGG+AGG + chr5_2:46844259-46844278 Msa0772470:CDS 45.0%
TTTCCCGGCTTAAGCTTCTT+TGG - chr5_2:46844410-46844429 None:intergenic 45.0%
AGCTTAAGCCGGGAAACTAT+TGG + chr5_2:46844414-46844433 Msa0772470:CDS 45.0%
!! AGTATCTGGATTTTGGGGGA+AGG + chr5_2:46844445-46844464 Msa0772470:CDS 45.0%
!! TGGTTTGTGTTTTCCCAGGA+AGG + chr5_2:46844552-46844571 Msa0772470:intron 45.0%
TGGGCACTAATGATACTGGA+AGG - chr5_2:46844585-46844604 None:intergenic 45.0%
CAGATGGGCACTAATGATAC+TGG - chr5_2:46844589-46844608 None:intergenic 45.0%
GGGACTTCCAACATTCAGAT+GGG - chr5_2:46844604-46844623 None:intergenic 45.0%
TGGGACTTCCAACATTCAGA+TGG - chr5_2:46844605-46844624 None:intergenic 45.0%
! CTGCTGGTAACCCACATTTT+TGG + chr5_2:46844841-46844860 Msa0772470:CDS 45.0%
!!! CCCACATTTTTGGGTCAATG+AGG + chr5_2:46844851-46844870 Msa0772470:CDS 45.0%
GGATGGTTCCTATCAAGAAG+AGG + chr5_2:46844872-46844891 Msa0772470:CDS 45.0%
CTTCTGTCCCTCTTCTTGAT+AGG - chr5_2:46844883-46844902 None:intergenic 45.0%
AGGGACAGAAGAATACACGA+GGG + chr5_2:46844892-46844911 Msa0772470:CDS 45.0%
GGATTTAGAAGGAACTGGCA+GGG - chr5_2:46845051-46845070 None:intergenic 45.0%
AGGATTTAGAAGGAACTGGC+AGG - chr5_2:46845052-46845071 None:intergenic 45.0%
TATTCCGTGCTCAAGGTAGT+CGG - chr5_2:46845123-46845142 None:intergenic 45.0%
TCTGAACTATTCCGTGCTCA+AGG - chr5_2:46845130-46845149 None:intergenic 45.0%
GTTCAGAAGCTTCTCTTGGT+TGG + chr5_2:46845143-46845162 Msa0772470:CDS 45.0%
AGCATTAACTGCCTTCAAGG+TGG - chr5_2:46845505-46845524 None:intergenic 45.0%
! CATGCTCATCTTCTGAGAAG+GGG - chr5_2:46845990-46846009 None:intergenic 45.0%
TCTTCCGTGCTTGATACAAC+AGG + chr5_2:46846120-46846139 Msa0772470:CDS 45.0%
GTCTTCTGTCCCTTGATAAG+TGG + chr5_2:46846343-46846362 Msa0772470:intron 45.0%
AGGATCTCCCAAGGTTTGAT+TGG + chr5_2:46847139-46847158 Msa0772470:intron 45.0%
ATTACGAAACCTGGACCTCA+AGG - chr5_2:46847397-46847416 None:intergenic 45.0%
CAGTATATTCCATTGGCCCA+AGG + chr5_2:46847887-46847906 Msa0772470:CDS 45.0%
CAGAGAATGCTTTCAGCCTT+GGG - chr5_2:46847906-46847925 None:intergenic 45.0%
TCAGAGAATGCTTTCAGCCT+TGG - chr5_2:46847907-46847926 None:intergenic 45.0%
!! GGCTGAAAGCATTCTCTGAT+TGG + chr5_2:46847908-46847927 Msa0772470:CDS 45.0%
GTTGCTGAAAACCATGGCAT+CGG + chr5_2:46847930-46847949 Msa0772470:CDS 45.0%
TTGCTGAAAACCATGGCATC+GGG + chr5_2:46847931-46847950 Msa0772470:CDS 45.0%
!! ATCAAATGGGTTGGCTTGTG+TGG + chr5_2:46848313-46848332 Msa0772470:CDS 45.0%
AGTTTCCTCAGGAGCTGATT+GGG - chr5_2:46848351-46848370 None:intergenic 45.0%
TGTAAAACTGCCTGGAGGAT+GGG + chr5_2:46848538-46848557 Msa0772470:intron 45.0%
CTGATTAGAGTGCATGCAAG+GGG + chr5_2:46848831-46848850 Msa0772470:CDS 45.0%
CAAGTGGCTAGAGATGTTTG+AGG + chr5_2:46848869-46848888 Msa0772470:CDS 45.0%
!! AAATTCTATAATTAATTAAT+AGG + chr5_2:46845632-46845651 Msa0772470:intron 5.0%
! GCAGTGCTGCTGCATAGATT+AGG - chr5_2:46843193-46843212 None:intergenic 50.0%
TCGACGGCGAAGGAATATTC+CGG - chr5_2:46843366-46843385 None:intergenic 50.0%
GGAATGTTGTCGACGGTGAT+GGG - chr5_2:46843432-46843451 None:intergenic 50.0%
CATCACCGTCGACAACATTC+CGG + chr5_2:46843431-46843450 Msa0772470:CDS 50.0%
AGTTTCGGAGAGAGGAACCT+GGG - chr5_2:46843472-46843491 None:intergenic 50.0%
GGTAAGAGAGGTTGCACAAC+CGG - chr5_2:46843504-46843523 None:intergenic 50.0%
CTAAGCTCCTTTGCATGGTG+CGG - chr5_2:46843528-46843547 None:intergenic 50.0%
! GTGCTCTAAGCTCCTTTGCA+TGG - chr5_2:46843533-46843552 None:intergenic 50.0%
CACTAAACTCCGGCGAATCT+AGG + chr5_2:46843550-46843569 Msa0772470:CDS 50.0%
! TCCGGCGAGTTTTCCGATTT+GGG + chr5_2:46843732-46843751 Msa0772470:CDS 50.0%
ACCCAAATCGGAAAACTCGC+CGG - chr5_2:46843736-46843755 None:intergenic 50.0%
!! CCGATTTGGGTGATTCTTCC+AGG + chr5_2:46843745-46843764 Msa0772470:CDS 50.0%
! GGTTGATTCTTCGAGCAACC+TGG - chr5_2:46843766-46843785 None:intergenic 50.0%
AACGAAGAAACACGCGTCGA+TGG - chr5_2:46843888-46843907 None:intergenic 50.0%
TCCGGCTGTTACGTTTGATG+TGG + chr5_2:46843938-46843957 Msa0772470:CDS 50.0%
TGTGGAATCTGATGAGGAGG+AGG + chr5_2:46843956-46843975 Msa0772470:CDS 50.0%
! CCTTTTAACCGGTCTAGCCA+CGG - chr5_2:46844015-46844034 None:intergenic 50.0%
CGTGGCTAGACCGGTTAAAA+GGG + chr5_2:46844013-46844032 Msa0772470:CDS 50.0%
ACACGACCCTTTCTTTCCCT+TGG - chr5_2:46844048-46844067 None:intergenic 50.0%
! AGGGTTCTGACAGTTCTGCA+AGG - chr5_2:46844387-46844406 None:intergenic 50.0%
CCGGCTTAAGCTTCTTTGGA+GGG - chr5_2:46844406-46844425 None:intergenic 50.0%
CCCTCCAAAGAAGCTTAAGC+CGG + chr5_2:46844403-46844422 Msa0772470:CDS 50.0%
CCTCCAAAGAAGCTTAAGCC+GGG + chr5_2:46844404-46844423 Msa0772470:CDS 50.0%
TTGCTAGCATCTGGCTGGAT+GGG - chr5_2:46844624-46844643 None:intergenic 50.0%
ATCCAGCCAGATGCTAGCAA+CGG + chr5_2:46844624-46844643 Msa0772470:CDS 50.0%
GTGTTTCCGTTGCTAGCATC+TGG - chr5_2:46844633-46844652 None:intergenic 50.0%
AGTGGAGCTTCGAATGTTGC+AGG + chr5_2:46844686-46844705 Msa0772470:CDS 50.0%
!!! GTTTTGGTTGTGCAGTTGGC+AGG + chr5_2:46844810-46844829 Msa0772470:intron 50.0%
GAGGGACAGAAGAATACACG+AGG + chr5_2:46844891-46844910 Msa0772470:CDS 50.0%
! ACGAGGGTACATATGGGGAA+AGG + chr5_2:46844908-46844927 Msa0772470:CDS 50.0%
! CAGGAAAGCGCATACAAGCT+TGG - chr5_2:46845027-46845046 None:intergenic 50.0%
ATTCCCGACTACCTTGAGCA+CGG + chr5_2:46845116-46845135 Msa0772470:CDS 50.0%
ATTCCGTGCTCAAGGTAGTC+GGG - chr5_2:46845122-46845141 None:intergenic 50.0%
! CTTCTCTTGGTTGGTTGCAG+TGG + chr5_2:46845152-46845171 Msa0772470:CDS 50.0%
! TTGGTTGGTTGCAGTGGATC+TGG + chr5_2:46845158-46845177 Msa0772470:CDS 50.0%
! TTCGATTCTAGAAGTGGGGC+TGG - chr5_2:46845878-46845897 None:intergenic 50.0%
TACCTTGGCATGCTCCTTGA+GGG + chr5_2:46846048-46846067 Msa0772470:CDS 50.0%
CTTGAGGTGCAAGATCCTTG+AGG + chr5_2:46847379-46847398 Msa0772470:intron 50.0%
GCATATTCACGAGTAGCAGC+AGG - chr5_2:46847976-46847995 None:intergenic 50.0%
ATTTCCCCAATCAGCTCCTG+AGG + chr5_2:46848343-46848362 Msa0772470:CDS 50.0%
GTTTCCTCAGGAGCTGATTG+GGG - chr5_2:46848350-46848369 None:intergenic 50.0%
CAGTTTCCTCAGGAGCTGAT+TGG - chr5_2:46848352-46848371 None:intergenic 50.0%
ATCAGCTCCTGAGGAAACTG+TGG + chr5_2:46848352-46848371 Msa0772470:CDS 50.0%
GTAGTGTCCACAGTTTCCTC+AGG - chr5_2:46848362-46848381 None:intergenic 50.0%
ACACGTGTAAAACTGCCTGG+AGG + chr5_2:46848533-46848552 Msa0772470:intron 50.0%
GTGTAAAACTGCCTGGAGGA+TGG + chr5_2:46848537-46848556 Msa0772470:intron 50.0%
GTAAAACTGCCTGGAGGATG+GGG + chr5_2:46848539-46848558 Msa0772470:intron 50.0%
CATTTACATCCCCATCCTCC+AGG - chr5_2:46848551-46848570 None:intergenic 50.0%
TGCAAGTACATCGGGGGTTA+TGG + chr5_2:46848569-46848588 Msa0772470:intron 50.0%
AGTGAGGACAGACACAACCA+GGG - chr5_2:46848670-46848689 None:intergenic 50.0%
TAGTGAGGACAGACACAACC+AGG - chr5_2:46848671-46848690 None:intergenic 50.0%
TAGAATCATGTTGCCGGCGC+CGG + chr5_2:46843344-46843363 Msa0772470:exon 55.0%
TCCTTCGCCGTCGAATACGA+CGG + chr5_2:46843372-46843391 Msa0772470:CDS 55.0%
CGGAATGTTGTCGACGGTGA+TGG - chr5_2:46843433-46843452 None:intergenic 55.0%
GAGAGGAACCTGGGAAACGA+CGG - chr5_2:46843463-46843482 None:intergenic 55.0%
GAGTTTCGGAGAGAGGAACC+TGG - chr5_2:46843473-46843492 None:intergenic 55.0%
CTTACCACCGCACCATGCAA+AGG + chr5_2:46843518-46843537 Msa0772470:CDS 55.0%
! CTCCGGCGAGTTTTCCGATT+TGG + chr5_2:46843731-46843750 Msa0772470:CDS 55.0%
TCTACTGCTCGGCAACTCAC+TGG - chr5_2:46843790-46843809 None:intergenic 55.0%
TGAGGAAACCGTGGCTAGAC+CGG + chr5_2:46844004-46844023 Msa0772470:CDS 55.0%
CCGTGGCTAGACCGGTTAAA+AGG + chr5_2:46844012-46844031 Msa0772470:CDS 55.0%
GCAATGGGGTCTATGCCAGA+AGG + chr5_2:46844155-46844174 Msa0772470:CDS 55.0%
CCCGGCTTAAGCTTCTTTGG+AGG - chr5_2:46844407-46844426 None:intergenic 55.0%
GGAAGGCTTCTGTCCTTCCT+GGG - chr5_2:46844568-46844587 None:intergenic 55.0%
TGGAAGGCTTCTGTCCTTCC+TGG - chr5_2:46844569-46844588 None:intergenic 55.0%
GTTGCTAGCATCTGGCTGGA+TGG - chr5_2:46844625-46844644 None:intergenic 55.0%
TTCCGTTGCTAGCATCTGGC+TGG - chr5_2:46844629-46844648 None:intergenic 55.0%
TGCTAGCAACGGAAACACGC+AGG + chr5_2:46844635-46844654 Msa0772470:CDS 55.0%
TTGGCAGGAGTTCAGACTGC+TGG + chr5_2:46844825-46844844 Msa0772470:CDS 55.0%
TAGAAGGAACTGGCAGGGAC+AGG - chr5_2:46845046-46845065 None:intergenic 55.0%
! CTCAAGGAGCATGCCAAGGT+AGG - chr5_2:46846049-46846068 None:intergenic 55.0%
CTACCTTGGCATGCTCCTTG+AGG + chr5_2:46846047-46846066 Msa0772470:CDS 55.0%
GTGCAAGATCCTTGAGGTCC+AGG + chr5_2:46847385-46847404 Msa0772470:intron 55.0%
TGCTTTCAGCCTTGGGCCAA+TGG - chr5_2:46847899-46847918 None:intergenic 55.0%
! AACCATGGCATCGGGCAAAC+TGG + chr5_2:46847939-46847958 Msa0772470:CDS 55.0%
TTCCAGTTTGCCCGATGCCA+TGG - chr5_2:46847944-46847963 None:intergenic 55.0%
CAGGACCACAACCCATTCCA+AGG - chr5_2:46848469-46848488 None:intergenic 55.0%
AGAGTGCATGCAAGGGGACT+TGG + chr5_2:46848837-46848856 Msa0772470:CDS 55.0%
GCGAAGGAATATTCCGGCGC+CGG - chr5_2:46843360-46843379 None:intergenic 60.0%
TCCGTCGTATTCGACGGCGA+AGG - chr5_2:46843376-46843395 None:intergenic 60.0%
CGGTGGTCCGTCGTATTCGA+CGG - chr5_2:46843382-46843401 None:intergenic 60.0%
!! ACGGTGATGGGAACAGCTCG+GGG - chr5_2:46843420-46843439 None:intergenic 60.0%
!! GACGGTGATGGGAACAGCTC+GGG - chr5_2:46843421-46843440 None:intergenic 60.0%
!! CGACGGTGATGGGAACAGCT+CGG - chr5_2:46843422-46843441 None:intergenic 60.0%
GGCGACCGGAATGTTGTCGA+CGG - chr5_2:46843439-46843458 None:intergenic 60.0%
AGGAACCTGGGAAACGACGG+CGG - chr5_2:46843460-46843479 None:intergenic 60.0%
GCATGGTGCGGTGGTAAGAG+AGG - chr5_2:46843516-46843535 None:intergenic 60.0%
AGCTCCTTTGCATGGTGCGG+TGG - chr5_2:46843525-46843544 None:intergenic 60.0%
ACTGCTCGGCAACTCACTGG+AGG - chr5_2:46843787-46843806 None:intergenic 60.0%
CAAAACGCTCACGGCCCTCA+AGG - chr5_2:46846065-46846084 None:intergenic 60.0%
! TGAGGGCCGTGAGCGTTTTG+AGG + chr5_2:46846065-46846084 Msa0772470:CDS 60.0%
! GGCCCTCAAGGAGCATGCCA+AGG - chr5_2:46846053-46846072 None:intergenic 65.0%
TGGGAAACGACGGCGGCGAC+CGG - chr5_2:46843453-46843472 None:intergenic 70.0%
GGTCGCCGCCGTCGTTTCCC+AGG + chr5_2:46843452-46843471 Msa0772470:CDS 75.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 46843185 46849108 46843185 ID=Msa0772470;Name=Msa0772470
chr5_2 mRNA 46843185 46849108 46843185 ID=Msa0772470-mRNA-1;Parent=Msa0772470;Name=Msa0772470-mRNA-1;_AED=0.08;_eAED=0.08;_QI=166|0.87|0.77|1|0.75|0.66|9|0|765
chr5_2 exon 46843185 46844466 46843185 ID=Msa0772470-mRNA-1:exon:13989;Parent=Msa0772470-mRNA-1
chr5_2 exon 46844570 46844707 46844570 ID=Msa0772470-mRNA-1:exon:13990;Parent=Msa0772470-mRNA-1
chr5_2 exon 46844825 46844929 46844825 ID=Msa0772470-mRNA-1:exon:13991;Parent=Msa0772470-mRNA-1
chr5_2 exon 46845017 46845202 46845017 ID=Msa0772470-mRNA-1:exon:13992;Parent=Msa0772470-mRNA-1
chr5_2 exon 46845964 46846141 46845964 ID=Msa0772470-mRNA-1:exon:13993;Parent=Msa0772470-mRNA-1
chr5_2 exon 46847860 46848101 46847860 ID=Msa0772470-mRNA-1:exon:13994;Parent=Msa0772470-mRNA-1
chr5_2 exon 46848242 46848405 46848242 ID=Msa0772470-mRNA-1:exon:13995;Parent=Msa0772470-mRNA-1
chr5_2 exon 46848824 46848957 46848824 ID=Msa0772470-mRNA-1:exon:13996;Parent=Msa0772470-mRNA-1
chr5_2 exon 46849074 46849108 46849074 ID=Msa0772470-mRNA-1:exon:13997;Parent=Msa0772470-mRNA-1
chr5_2 five_prime_UTR 46843185 46843350 46843185 ID=Msa0772470-mRNA-1:five_prime_utr;Parent=Msa0772470-mRNA-1
chr5_2 CDS 46843351 46844466 46843351 ID=Msa0772470-mRNA-1:cds;Parent=Msa0772470-mRNA-1
chr5_2 CDS 46844570 46844707 46844570 ID=Msa0772470-mRNA-1:cds;Parent=Msa0772470-mRNA-1
chr5_2 CDS 46844825 46844929 46844825 ID=Msa0772470-mRNA-1:cds;Parent=Msa0772470-mRNA-1
chr5_2 CDS 46845017 46845202 46845017 ID=Msa0772470-mRNA-1:cds;Parent=Msa0772470-mRNA-1
chr5_2 CDS 46845964 46846141 46845964 ID=Msa0772470-mRNA-1:cds;Parent=Msa0772470-mRNA-1
chr5_2 CDS 46847860 46848101 46847860 ID=Msa0772470-mRNA-1:cds;Parent=Msa0772470-mRNA-1
chr5_2 CDS 46848242 46848405 46848242 ID=Msa0772470-mRNA-1:cds;Parent=Msa0772470-mRNA-1
chr5_2 CDS 46848824 46848957 46848824 ID=Msa0772470-mRNA-1:cds;Parent=Msa0772470-mRNA-1
chr5_2 CDS 46849074 46849108 46849074 ID=Msa0772470-mRNA-1:cds;Parent=Msa0772470-mRNA-1
Gene Sequence

>Msa0772470

ATGTTGCCGGCGCCGGAATATTCCTTCGCCGTCGAATACGACGGACCACCGTTAACTTACGATCTTCCCCGAGCTGTTCCCATCACCGTCGACAACATTCCGGTCGCCGCCGTCGTTTCCCAGGTTCCTCTCTCCGAAACTCTCTCTTTACCGGTTGTGCAACCTCTCTTACCACCGCACCATGCAAAGGAGCTTAGAGCACTAAACTCCGGCGAATCTAGGGTTTCCAAAGAACTCGAATTAGCTTCGGAGAGAACGGTTTCTCCAACTTCTGTTATTGCTTTCGATCACCGTGGTTCGCAGATTAACGTCTGCGAACTTTCCGGTGAATTAAGTAGTTCTGGACCGTTTGATTTCTCAAACGGAATTGAAAATGAAATCTCCGGCGAGTTTTCCGATTTGGGTGATTCTTCCAGGTTGCTCGAAGAATCAACCTCCAGTGAGTTGCCGAGCAGTAGAACTAGAAGCTCTAGTACTATGGAATTGAATCAACAAGATTGGGGTTCAACTGAGTCTGTGTTGAGTTTAGAGTATCCATCGACGCGTGTTTCTTCGTTGAAAGCGGAGGATTGTGATGGTAAACGTGTTCCGGCTGTTACGTTTGATGTGGAATCTGATGAGGAGGAGGATGATTTGAATGAGGAGTTTGAAGTTGAGGAAACCGTGGCTAGACCGGTTAAAAGGGAGCCGTTAACCAAGGGAAAGAAAGGGTCGTGTTATCGATGTTTTAAGGGGAATAGGTTTACTGATAAAGAGGTTTGTTTGGTTTGTGATGCAAAGTATTGTAGTAATTGTGTGCTTAGAGCAATGGGGTCTATGCCAGAAGGTAGAAAATGTGTTACTTGCATTGGATTTGCTATAGATGAGTCGAATAGAGCAAATTTAGGGAAATGTTCTCGGATGCTTAAGCGATTGCTTAATCAGTTGGAGGTTAGACAGATAATGAAAGCTGAGAAGTTTTGTGAAGCAAATCAGCTTCCACCGAATTACATTTGTGTGAATGGGAAACCACTTTCTTATGAGGAATTAGTTACCTTGCAGAACTGTCAGAACCCTCCAAAGAAGCTTAAGCCGGGAAACTATTGGTATGATAAAGTATCTGGATTTTGGGGGAAGGAAGGACAGAAGCCTTCCAGTATCATTAGTGCCCATCTGAATGTTGGAAGTCCCATCCAGCCAGATGCTAGCAACGGAAACACGCAGGTTTTCGTTAATGGTCGTGAAATAACAAAAGTGGAGCTTCGAATGTTGCAGTTGGCAGGAGTTCAGACTGCTGGTAACCCACATTTTTGGGTCAATGAGGATGGTTCCTATCAAGAAGAGGGACAGAAGAATACACGAGGGTACATATGGGGAAAGGCTGGAACCAAGCTTGTATGCGCTTTCCTGTCCCTGCCAGTTCCTTCTAAATCCTCGAATTCTCTTGGAGAACAACACTCCAATTTGGCTAGCAGATCAATTCCCGACTACCTTGAGCACGGAATAGTTCAGAAGCTTCTCTTGGTTGGTTGCAGTGGATCTGGAACGAGCACTATTTTTAAGCAGGCCAAGATTCTTTACAAAAGCATCCCCTTCTCAGAAGATGAGCATGAAAATATTATATTGACCATTCAGAGCAATGTTTACACCTACCTTGGCATGCTCCTTGAGGGCCGTGAGCGTTTTGAGGATGAAATATTGGCAGATTTAACGAAAAGGCAATCTTCCGTGCTTGATACAACAGGAACCAATCCAAAACCCGATGATAAGACAGTATATTCCATTGGCCCAAGGCTGAAAGCATTCTCTGATTGGTTGCTGAAAACCATGGCATCGGGCAAACTGGAAGCTATTTTTCCTGCTGCTACTCGTGAATATGCACCATTGATTGAGGAATTATGGAATGATGCTGCCATTAAGGCAACATATGAAAGAAGAAGTGAATTGGAAATGCTGCCTAGTGTTGCCACTTATTTCTTAGAGCGGGCTGTCAAAATATTAAGGACAGATTATGAACCCTCGGATTTAGATATCCTCTATGCTGAAGGAGTTACTTCATCAAATGGGTTGGCTTGTGTGGAGTTTTCATTTCCCCAATCAGCTCCTGAGGAAACTGTGGACACTACTGATCAATATGATTCTTTGGCTAGGTATCAACTGATTAGAGTGCATGCAAGGGGACTTGGAGAAAATTGCAAGTGGCTAGAGATGTTTGAGGATGTTGAAATGGTCATCTTCTGTGTTTCCTTGAGTGACTATGATCAGTTTTCTGTCGATGGAAATGGAGAAAGTCGAACAAGTTCCTTTGACCAAGTGTGA
Protein sequence

>Msa0772470

MLPAPEYSFAVEYDGPPLTYDLPRAVPITVDNIPVAAVVSQVPLSETLSLPVVQPLLPPHHAKELRALNSGESRVSKELELASERTVSPTSVIAFDHRGSQINVCELSGELSSSGPFDFSNGIENEISGEFSDLGDSSRLLEESTSSELPSSRTRSSSTMELNQQDWGSTESVLSLEYPSTRVSSLKAEDCDGKRVPAVTFDVESDEEEDDLNEEFEVEETVARPVKREPLTKGKKGSCYRCFKGNRFTDKEVCLVCDAKYCSNCVLRAMGSMPEGRKCVTCIGFAIDESNRANLGKCSRMLKRLLNQLEVRQIMKAEKFCEANQLPPNYICVNGKPLSYEELVTLQNCQNPPKKLKPGNYWYDKVSGFWGKEGQKPSSIISAHLNVGSPIQPDASNGNTQVFVNGREITKVELRMLQLAGVQTAGNPHFWVNEDGSYQEEGQKNTRGYIWGKAGTKLVCAFLSLPVPSKSSNSLGEQHSNLASRSIPDYLEHGIVQKLLLVGCSGSGTSTIFKQAKILYKSIPFSEDEHENIILTIQSNVYTYLGMLLEGRERFEDEILADLTKRQSSVLDTTGTNPKPDDKTVYSIGPRLKAFSDWLLKTMASGKLEAIFPAATREYAPLIEELWNDAAIKATYERRSELEMLPSVATYFLERAVKILRTDYEPSDLDILYAEGVTSSNGLACVEFSFPQSAPEETVDTTDQYDSLARYQLIRVHARGLGENCKWLEMFEDVEMVIFCVSLSDYDQFSVDGNGESRTSSFDQV*