Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0012530 | sp|Q9LQV2|RDR1_ARATH | 49.419 | 172 | 85 | 2 | 5 | 175 | 3 | 173 | 1.59e-50 | 179 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006110 | Msa0012530 | 0.803512 | 3.365315e-49 | -8.615850e-47 |
| Msa0006390 | Msa0012530 | 0.806522 | 7.898829e-50 | -8.615850e-47 |
| Msa0008670 | Msa0012530 | 0.801943 | 7.091192e-49 | -8.615850e-47 |
| Msa0012060 | Msa0012530 | 0.809492 | 1.842279e-50 | -8.615850e-47 |
| Msa0012530 | Msa0017510 | 0.850108 | 2.101927e-60 | -8.615850e-47 |
| Msa0012530 | Msa0028640 | 0.800084 | 1.700862e-48 | -8.615850e-47 |
| Msa0012530 | Msa0030180 | 0.805349 | 1.393396e-49 | -8.615850e-47 |
| Msa0012530 | Msa0034270 | 0.805112 | 1.562514e-49 | -8.615850e-47 |
| Msa0012530 | Msa0045790 | 0.811378 | 7.213955e-51 | -8.615850e-47 |
| Msa0012530 | Msa0046160 | 0.811769 | 5.930454e-51 | -8.615850e-47 |
| Msa0012530 | Msa0047030 | 0.809279 | 2.047035e-50 | -8.615850e-47 |
| Msa0012530 | Msa0061380 | 0.924201 | 9.666840e-90 | -8.615850e-47 |
| Msa0012530 | Msa0073530 | 0.810682 | 1.020887e-50 | -8.615850e-47 |
| Msa0012530 | Msa0089630 | 0.810769 | 9.774838e-51 | -8.615850e-47 |
| Msa0012530 | Msa0103190 | 0.801770 | 7.696369e-49 | -8.615850e-47 |
| Msa0012530 | Msa0105070 | 0.814497 | 1.495167e-51 | -8.615850e-47 |
| Msa0012530 | Msa0110970 | 0.808945 | 2.413832e-50 | -8.615850e-47 |
| Msa0012530 | Msa0115000 | 0.948301 | 1.237521e-106 | -8.615850e-47 |
| Msa0012530 | Msa0116770 | 0.815486 | 9.020185e-52 | -8.615850e-47 |
| Msa0012530 | Msa0139060 | 0.818211 | 2.206109e-52 | -8.615850e-47 |
| Msa0012530 | Msa0152430 | 0.875941 | 2.070616e-68 | -8.615850e-47 |
| Msa0012530 | Msa0157290 | 0.850550 | 1.579575e-60 | -8.615850e-47 |
| Msa0012530 | Msa0165210 | 0.824456 | 7.992806e-54 | -8.615850e-47 |
| Msa0012530 | Msa0166870 | 0.807129 | 5.878152e-50 | -8.615850e-47 |
| Msa0012530 | Msa0200260 | 0.815246 | 1.020174e-51 | -8.615850e-47 |
| Msa0012530 | Msa0212990 | 0.812986 | 3.216000e-51 | -8.615850e-47 |
| Msa0012530 | Msa0220580 | 0.806719 | 7.176478e-50 | -8.615850e-47 |
| Msa0012530 | Msa0220740 | 0.825608 | 4.273053e-54 | -8.615850e-47 |
| Msa0012530 | Msa0222700 | 0.811420 | 7.063597e-51 | -8.615850e-47 |
| Msa0012530 | Msa0225320 | 0.812738 | 3.645794e-51 | -8.615850e-47 |
| Msa0012530 | Msa0237310 | 0.814361 | 1.602113e-51 | -8.615850e-47 |
| Msa0012530 | Msa0240110 | 0.820034 | 8.490766e-53 | -8.615850e-47 |
| Msa0012530 | Msa0240150 | 0.805128 | 1.550388e-49 | -8.615850e-47 |
| Msa0012530 | Msa0243100 | 0.826175 | 3.133023e-54 | -8.615850e-47 |
| Msa0012530 | Msa0261340 | 0.816553 | 5.210864e-52 | -8.615850e-47 |
| Msa0012530 | Msa0264040 | 0.818885 | 1.551701e-52 | -8.615850e-47 |
| Msa0012530 | Msa0274730 | 0.812858 | 3.431919e-51 | -8.615850e-47 |
| Msa0012530 | Msa0283450 | 0.801941 | 7.099880e-49 | -8.615850e-47 |
| Msa0012530 | Msa0287650 | 0.805717 | 1.166682e-49 | -8.615850e-47 |
| Msa0012530 | Msa0291540 | 0.810795 | 9.651650e-51 | -8.615850e-47 |
| Msa0012530 | Msa0292930 | 0.822426 | 2.384470e-53 | -8.615850e-47 |
| Msa0012530 | Msa0302000 | 0.846244 | 2.452533e-59 | -8.615850e-47 |
| Msa0012530 | Msa0315530 | 0.813241 | 2.827259e-51 | -8.615850e-47 |
| Msa0012530 | Msa0323610 | 0.806560 | 7.754267e-50 | -8.615850e-47 |
| Msa0012530 | Msa0330340 | 0.808755 | 2.650431e-50 | -8.615850e-47 |
| Msa0012530 | Msa0331000 | 0.805476 | 1.310411e-49 | -8.615850e-47 |
| Msa0012530 | Msa0332000 | 0.800597 | 1.337565e-48 | -8.615850e-47 |
| Msa0012530 | Msa0338110 | 0.802153 | 6.421101e-49 | -8.615850e-47 |
| Msa0012530 | Msa0339320 | 0.826820 | 2.199304e-54 | -8.615850e-47 |
| Msa0012530 | Msa0340090 | 0.810363 | 1.196449e-50 | -8.615850e-47 |
| Msa0012530 | Msa0357340 | 0.801262 | 9.783588e-49 | -8.615850e-47 |
| Msa0012530 | Msa0376350 | 0.835262 | 1.858604e-56 | -8.615850e-47 |
| Msa0012530 | Msa0388960 | 0.830605 | 2.673104e-55 | -8.615850e-47 |
| Msa0012530 | Msa0392510 | 0.810479 | 1.129207e-50 | -8.615850e-47 |
| Msa0012530 | Msa0393080 | 0.802688 | 4.982945e-49 | -8.615850e-47 |
| Msa0012530 | Msa0395790 | 0.812408 | 4.302922e-51 | -8.615850e-47 |
| Msa0012530 | Msa0410650 | 0.813055 | 3.105660e-51 | -8.615850e-47 |
| Msa0012530 | Msa0417880 | 0.817321 | 3.504305e-52 | -8.615850e-47 |
| Msa0012530 | Msa0424790 | 0.830445 | 2.925051e-55 | -8.615850e-47 |
| Msa0012530 | Msa0426640 | 0.808588 | 2.876273e-50 | -8.615850e-47 |
| Msa0012530 | Msa0428590 | 0.808076 | 3.699543e-50 | -8.615850e-47 |
| Msa0012530 | Msa0432300 | 0.804297 | 2.311480e-49 | -8.615850e-47 |
| Msa0012530 | Msa0437990 | 0.808025 | 3.792078e-50 | -8.615850e-47 |
| Msa0012530 | Msa0439970 | 0.815136 | 1.079119e-51 | -8.615850e-47 |
| Msa0012530 | Msa0443260 | 0.805782 | 1.130239e-49 | -8.615850e-47 |
| Msa0012530 | Msa0464380 | 0.805796 | 1.122613e-49 | -8.615850e-47 |
| Msa0012530 | Msa0464680 | 0.810692 | 1.015705e-50 | -8.615850e-47 |
| Msa0012530 | Msa0468290 | 0.808878 | 2.494581e-50 | -8.615850e-47 |
| Msa0012530 | Msa0484650 | 0.820292 | 7.409807e-53 | -8.615850e-47 |
| Msa0012530 | Msa0484780 | 0.818463 | 1.934489e-52 | -8.615850e-47 |
| Msa0012530 | Msa0488560 | 0.833229 | 6.011468e-56 | -8.615850e-47 |
| Msa0012530 | Msa0490730 | -0.803900 | 2.795353e-49 | -8.615850e-47 |
| Msa0012530 | Msa0495320 | 0.809828 | 1.560202e-50 | -8.615850e-47 |
| Msa0012530 | Msa0503060 | 0.818387 | 2.012801e-52 | -8.615850e-47 |
| Msa0012530 | Msa0503580 | 0.800934 | 1.141645e-48 | -8.615850e-47 |
| Msa0012530 | Msa0507680 | 0.809773 | 1.603242e-50 | -8.615850e-47 |
| Msa0012530 | Msa0512900 | 0.803803 | 2.928738e-49 | -8.615850e-47 |
| Msa0012530 | Msa0516170 | 0.838889 | 2.199475e-57 | -8.615850e-47 |
| Msa0012530 | Msa0531180 | 0.805460 | 1.320695e-49 | -8.615850e-47 |
| Msa0012530 | Msa0545200 | 0.804468 | 2.129668e-49 | -8.615850e-47 |
| Msa0012530 | Msa0545210 | 0.827871 | 1.231616e-54 | -8.615850e-47 |
| Msa0012530 | Msa0548170 | 0.808494 | 3.013085e-50 | -8.615850e-47 |
| Msa0012530 | Msa0576880 | 0.827008 | 1.983355e-54 | -8.615850e-47 |
| Msa0012530 | Msa0601750 | 0.808361 | 3.215683e-50 | -8.615850e-47 |
| Msa0012530 | Msa0608620 | 0.800370 | 1.487814e-48 | -8.615850e-47 |
| Msa0012530 | Msa0625190 | 0.801442 | 8.986751e-49 | -8.615850e-47 |
| Msa0012530 | Msa0633700 | 0.807229 | 5.597026e-50 | -8.615850e-47 |
| Msa0012530 | Msa0657970 | 0.836324 | 1.000557e-56 | -8.615850e-47 |
| Msa0012530 | Msa0661650 | 0.813798 | 2.132440e-51 | -8.615850e-47 |
| Msa0012530 | Msa0669320 | 0.809611 | 1.737271e-50 | -8.615850e-47 |
| Msa0012530 | Msa0673450 | 0.813820 | 2.108628e-51 | -8.615850e-47 |
| Msa0012530 | Msa0673460 | 0.802453 | 5.570585e-49 | -8.615850e-47 |
| Msa0012530 | Msa0681270 | 0.810473 | 1.132924e-50 | -8.615850e-47 |
| Msa0012530 | Msa0682550 | 0.801070 | 1.071133e-48 | -8.615850e-47 |
| Msa0012530 | Msa0685750 | 0.823940 | 1.056699e-53 | -8.615850e-47 |
| Msa0012530 | Msa0702350 | 0.801852 | 7.404280e-49 | -8.615850e-47 |
| Msa0012530 | Msa0703050 | 0.823938 | 1.057571e-53 | -8.615850e-47 |
| Msa0012530 | Msa0715620 | 0.807991 | 3.855747e-50 | -8.615850e-47 |
| Msa0012530 | Msa0743720 | 0.801485 | 8.808229e-49 | -8.615850e-47 |
| Msa0012530 | Msa0760130 | 0.804878 | 1.748269e-49 | -8.615850e-47 |
| Msa0012530 | Msa0762360 | 0.804925 | 1.709699e-49 | -8.615850e-47 |
| Msa0012530 | Msa0772470 | 0.806142 | 9.498391e-50 | -8.615850e-47 |
| Msa0012530 | Msa0779330 | 0.839559 | 1.474242e-57 | -8.615850e-47 |
| Msa0012530 | Msa0795560 | 0.804176 | 2.449320e-49 | -8.615850e-47 |
| Msa0012530 | Msa0798430 | 0.817455 | 3.268286e-52 | -8.615850e-47 |
| Msa0012530 | Msa0816710 | 0.808225 | 3.437927e-50 | -8.615850e-47 |
| Msa0012530 | Msa0832320 | 0.839699 | 1.355002e-57 | -8.615850e-47 |
| Msa0012530 | Msa0838580 | 0.803120 | 4.057163e-49 | -8.615850e-47 |
| Msa0012530 | Msa0844240 | 0.809214 | 2.113115e-50 | -8.615850e-47 |
| Msa0012530 | Msa0876660 | 0.806440 | 8.219118e-50 | -8.615850e-47 |
| Msa0012530 | Msa0880140 | 0.846035 | 2.796757e-59 | -8.615850e-47 |
| Msa0012530 | Msa0880950 | 0.804038 | 2.616294e-49 | -8.615850e-47 |
| Msa0012530 | Msa0885280 | 0.812634 | 3.841277e-51 | -8.615850e-47 |
| Msa0012530 | Msa0907070 | 0.804353 | 2.250184e-49 | -8.615850e-47 |
| Msa0012530 | Msa0908050 | 0.802142 | 6.454372e-49 | -8.615850e-47 |
| Msa0012530 | Msa0909120 | 0.835476 | 1.641288e-56 | -8.615850e-47 |
| Msa0012530 | Msa0909140 | 0.820891 | 5.397130e-53 | -8.615850e-47 |
| Msa0012530 | Msa0952120 | 0.836464 | 9.213457e-57 | -8.615850e-47 |
| Msa0012530 | Msa0954550 | 0.803708 | 3.064952e-49 | -8.615850e-47 |
| Msa0012530 | Msa0969520 | 0.805162 | 1.524692e-49 | -8.615850e-47 |
| Msa0012530 | Msa0990350 | 0.814665 | 1.372597e-51 | -8.615850e-47 |
| Msa0012530 | Msa1004800 | 0.800048 | 1.730284e-48 | -8.615850e-47 |
| Msa0012530 | Msa1004840 | 0.806332 | 8.658208e-50 | -8.615850e-47 |
| Msa0012530 | Msa1019000 | 0.805333 | 1.404529e-49 | -8.615850e-47 |
| Msa0012530 | Msa1019150 | 0.822771 | 1.982105e-53 | -8.615850e-47 |
| Msa0012530 | Msa1030970 | 0.808163 | 3.544802e-50 | -8.615850e-47 |
| Msa0012530 | Msa1032850 | 0.837813 | 4.165970e-57 | -8.615850e-47 |
| Msa0012530 | Msa1047080 | 0.813013 | 3.173032e-51 | -8.615850e-47 |
| Msa0012530 | Msa1052830 | 0.807364 | 5.240350e-50 | -8.615850e-47 |
| Msa0012530 | Msa1067120 | 0.801640 | 8.186577e-49 | -8.615850e-47 |
| Msa0012530 | Msa1079180 | 0.805581 | 1.246002e-49 | -8.615850e-47 |
| Msa0012530 | Msa1081330 | 0.825190 | 5.365160e-54 | -8.615850e-47 |
| Msa0012530 | Msa1082500 | 0.837441 | 5.188652e-57 | -8.615850e-47 |
| Msa0012530 | Msa1084960 | 0.813506 | 2.473072e-51 | -8.615850e-47 |
| Msa0012530 | Msa1085200 | 0.810178 | 1.311747e-50 | -8.615850e-47 |
| Msa0012530 | Msa1104000 | 0.800608 | 1.330647e-48 | -8.615850e-47 |
| Msa0012530 | Msa1108160 | 0.822266 | 2.596881e-53 | -8.615850e-47 |
| Msa0012530 | Msa1119940 | 0.810907 | 9.127909e-51 | -8.615850e-47 |
| Msa0012530 | Msa1143680 | 0.810941 | 8.971835e-51 | -8.615850e-47 |
| Msa0012530 | Msa1147740 | 0.814913 | 1.209173e-51 | -8.615850e-47 |
| Msa0012530 | Msa1151910 | 0.826970 | 2.024657e-54 | -8.615850e-47 |
| Msa0012530 | Msa1154690 | 0.816724 | 4.772136e-52 | -8.615850e-47 |
| Msa0012530 | Msa1154710 | 0.819084 | 1.398628e-52 | -8.615850e-47 |
| Msa0012530 | Msa1162550 | -0.802276 | 6.058228e-49 | -8.615850e-47 |
| Msa0012530 | Msa1186060 | 0.811492 | 6.813732e-51 | -8.615850e-47 |
| Msa0012530 | Msa1199220 | 0.827659 | 1.384567e-54 | -8.615850e-47 |
| Msa0012530 | Msa1199570 | 0.802068 | 6.683863e-49 | -8.615850e-47 |
| Msa0012530 | Msa1199830 | -0.802360 | 5.820646e-49 | -8.615850e-47 |
| Msa0012530 | Msa1209460 | 0.815336 | 9.737937e-52 | -8.615850e-47 |
| Msa0012530 | Msa1224480 | 0.800776 | 1.229622e-48 | -8.615850e-47 |
| Msa0012530 | Msa1228210 | 0.816304 | 5.923762e-52 | -8.615850e-47 |
| Msa0012530 | Msa1238470 | 0.800126 | 1.668461e-48 | -8.615850e-47 |
| Msa0012530 | Msa1242220 | 0.829148 | 6.052479e-55 | -8.615850e-47 |
| Msa0012530 | Msa1244250 | 0.804689 | 1.914381e-49 | -8.615850e-47 |
| Msa0012530 | Msa1249490 | 0.802366 | 5.805680e-49 | -8.615850e-47 |
| Msa0012530 | Msa1269480 | 0.815856 | 7.461205e-52 | -8.615850e-47 |
| Msa0012530 | Msa1271290 | 0.826918 | 2.083794e-54 | -8.615850e-47 |
| Msa0012530 | Msa1271300 | 0.814734 | 1.325121e-51 | -8.615850e-47 |
| Msa0012530 | Msa1278840 | 0.833796 | 4.340560e-56 | -8.615850e-47 |
| Msa0012530 | Msa1283860 | 0.821436 | 4.042795e-53 | -8.615850e-47 |
| Msa0012530 | Msa1284680 | 0.811354 | 7.300952e-51 | -8.615850e-47 |
| Msa0012530 | Msa1300490 | 0.800288 | 1.546003e-48 | -8.615850e-47 |
| Msa0012530 | Msa1302830 | 0.819108 | 1.380933e-52 | -8.615850e-47 |
| Msa0012530 | Msa1308380 | 0.839051 | 1.996345e-57 | -8.615850e-47 |
| Msa0012530 | Msa1309030 | 0.814459 | 1.524229e-51 | -8.615850e-47 |
| Msa0012530 | Msa1313150 | 0.828436 | 8.999535e-55 | -8.615850e-47 |
| Msa0012530 | Msa1322890 | 0.817779 | 2.763178e-52 | -8.615850e-47 |
| Msa0012530 | Msa1324500 | 0.801388 | 9.217321e-49 | -8.615850e-47 |
| Msa0012530 | Msa1324550 | 0.812842 | 3.458105e-51 | -8.615850e-47 |
| Msa0012530 | Msa1327680 | 0.810477 | 1.130564e-50 | -8.615850e-47 |
| Msa0012530 | Msa1328710 | 0.802827 | 4.663068e-49 | -8.615850e-47 |
| Msa0012530 | Msa1359040 | 0.801041 | 1.085697e-48 | -8.615850e-47 |
| Msa0012530 | Msa1360060 | 0.840517 | 8.293272e-58 | -8.615850e-47 |
| Msa0012530 | Msa1369120 | 0.821512 | 3.882132e-53 | -8.615850e-47 |
| Msa0012530 | Msa1372760 | 0.838388 | 2.962234e-57 | -8.615850e-47 |
| Msa0012530 | Msa1392260 | 0.804843 | 1.777755e-49 | -8.615850e-47 |
| Msa0012530 | Msa1398340 | 0.806588 | 7.647258e-50 | -8.615850e-47 |
| Msa0012530 | Msa1400320 | 0.804277 | 2.333520e-49 | -8.615850e-47 |
| Msa0012530 | Msa1409700 | 0.804251 | 2.362988e-49 | -8.615850e-47 |
| Msa0012530 | Msa1409870 | 0.805962 | 1.036348e-49 | -8.615850e-47 |
| Msa0012530 | Msa1411020 | 0.808984 | 2.367699e-50 | -8.615850e-47 |
| Msa0012530 | Msa1423880 | 0.820495 | 6.654212e-53 | -8.615850e-47 |
| Msa0012530 | Msa1424290 | 0.807863 | 4.106683e-50 | -8.615850e-47 |
| Msa0012530 | Msa1434350 | 0.806488 | 8.028900e-50 | -8.615850e-47 |
| Msa0012530 | Msa1436480 | 0.800692 | 1.278969e-48 | -8.615850e-47 |
| Msa0012530 | Msa1438250 | 0.835111 | 2.029733e-56 | -8.615850e-47 |
| Msa0012530 | Msa1438970 | 0.801655 | 8.127915e-49 | -8.615850e-47 |
| Msa0012530 | Msa1439320 | 0.806862 | 6.692891e-50 | -8.615850e-47 |
| Msa0012530 | Msa1466540 | 0.805173 | 1.516824e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0012530 | MtrunA17_Chr1g0161491 | 93.714 | 175 | 11 | 0 | 1 | 175 | 15 | 189 | 3.58e-111 | 343 |
| Msa0012530 | MtrunA17_Chr1g0161521 | 74.317 | 183 | 42 | 3 | 1 | 178 | 1 | 183 | 1.25e-82 | 266 |
| Msa0012530 | MtrunA17_Chr1g0161511 | 74.157 | 178 | 43 | 2 | 1 | 175 | 1 | 178 | 2.63e-81 | 262 |
| Msa0012530 | MtrunA17_Chr1g0161471 | 71.910 | 178 | 47 | 2 | 1 | 175 | 1 | 178 | 7.41e-80 | 258 |
| Msa0012530 | MtrunA17_Chr1g0161451 | 34.682 | 173 | 111 | 2 | 4 | 175 | 2 | 173 | 4.27e-27 | 108 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0012530 | AT1G14790.1 | 49.419 | 172 | 85 | 2 | 5 | 175 | 3 | 173 | 1.62e-51 | 179 |
Find 47 sgRNAs with CRISPR-Local
Find 208 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACGATGTTAAACTGTATTT+TGG | 0.159141 | 1_1:+18760033 | Msa0012530:CDS |
| GTGGATGCTAGTGTAGATTT+TGG | 0.172622 | 1_1:+18760096 | Msa0012530:CDS |
| TTTGCCTAAGCCGCCCTTTC+GGG | 0.184683 | 1_1:-18761570 | None:intergenic |
| AGCTTTCATATGAGAATATT+TGG | 0.191630 | 1_1:+18760178 | Msa0012530:CDS |
| GGAACTCCTATTTAAAAGTT+AGG | 0.218706 | 1_1:+18759959 | Msa0012530:CDS |
| TCCAAAGCCAAGGGCATTCT+TGG | 0.267359 | 1_1:+18760002 | Msa0012530:CDS |
| TGCAAAGTATCTATTGATTC+AGG | 0.268018 | 1_1:+18760233 | Msa0012530:CDS |
| AGGAAAGATTCTCTATATTA+TGG | 0.268444 | 1_1:+18760070 | Msa0012530:CDS |
| TCCAAGAATGCCCTTGGCTT+TGG | 0.307615 | 1_1:-18760003 | None:intergenic |
| AGTAAAACAATTGAGTTGTA+TGG | 0.346819 | 1_1:+18759742 | Msa0012530:CDS |
| TGAATAATTGCAAATGCTCT+TGG | 0.351532 | 1_1:-18759871 | None:intergenic |
| GCAGAACTAAATTGCGGTTC+GGG | 0.394506 | 1_1:+18759938 | Msa0012530:CDS |
| CTATTTAAAAGTTAGGGAAA+TGG | 0.416320 | 1_1:+18759966 | Msa0012530:CDS |
| AAAACCCGAAAGGGCGGCTT+AGG | 0.422242 | 1_1:+18761566 | Msa0012530:CDS |
| AGCAGAACTAAATTGCGGTT+CGG | 0.428037 | 1_1:+18759937 | Msa0012530:CDS |
| ATATTTGTAGAGCATTATAC+TGG | 0.432174 | 1_1:+18759799 | Msa0012530:CDS |
| TGAGACACGTTCACAAAAGA+AGG | 0.445945 | 1_1:-18759769 | None:intergenic |
| GAACTCCTATTTAAAAGTTA+GGG | 0.447970 | 1_1:+18759960 | Msa0012530:CDS |
| TTCATAGGTTGTCAATCAGC+GGG | 0.461028 | 1_1:-18761602 | None:intergenic |
| CCATTGACCACAGATCATCC+TGG | 0.480674 | 1_1:-18761475 | None:intergenic |
| TTGGGATTGGTATGAGAAAG+TGG | 0.485612 | 1_1:+18760115 | Msa0012530:CDS |
| CAATTTAGTTCTGCTAGGTA+AGG | 0.518592 | 1_1:-18759929 | None:intergenic |
| CCAGGATGATCTGTGGTCAA+TGG | 0.526860 | 1_1:+18761475 | Msa0012530:CDS |
| GATTGAGCTGCATCAACCAC+AGG | 0.538892 | 1_1:+18760203 | Msa0012530:CDS |
| CATTGACCACAGATCATCCT+GGG | 0.544150 | 1_1:-18761474 | None:intergenic |
| GCTAAGTTGAAAACCCGAAA+GGG | 0.561489 | 1_1:+18761557 | Msa0012530:CDS |
| AAACTGTCCAAGAATGCCCT+TGG | 0.565377 | 1_1:-18760009 | None:intergenic |
| GTAGAGCATTATACTGGTGA+AGG | 0.567027 | 1_1:+18759805 | Msa0012530:CDS |
| CGCTAAGTTGAAAACCCGAA+AGG | 0.568701 | 1_1:+18761556 | Msa0012530:CDS |
| ATTCTCTATATTATGGAAGG+TGG | 0.569959 | 1_1:+18760077 | Msa0012530:CDS |
| TTACAAGCAGGTTACTCCCC+AGG | 0.570563 | 1_1:+18761457 | Msa0012530:intron |
| CTTCATAGGTTGTCAATCAG+CGG | 0.582611 | 1_1:-18761603 | None:intergenic |
| AAGATTCTCTATATTATGGA+AGG | 0.592994 | 1_1:+18760074 | Msa0012530:CDS |
| AAAACATGTTACATTCATGA+TGG | 0.597041 | 1_1:+18759906 | Msa0012530:CDS |
| GTTGCTATGAAGATTAGAGT+AGG | 0.605906 | 1_1:+18759835 | Msa0012530:CDS |
| GAGATATTGATCCAAAGCCA+AGG | 0.607190 | 1_1:+18759992 | Msa0012530:CDS |
| TACCTAGCAGAACTAAATTG+CGG | 0.623189 | 1_1:+18759932 | Msa0012530:CDS |
| GAGACACGTTCACAAAAGAA+GGG | 0.638551 | 1_1:-18759768 | None:intergenic |
| AGATATTGATCCAAAGCCAA+GGG | 0.640291 | 1_1:+18759993 | Msa0012530:CDS |
| ATGAAGATTAGAGTAGGCAA+AGG | 0.643746 | 1_1:+18759841 | Msa0012530:CDS |
| AACCGCAATTTAGTTCTGCT+AGG | 0.654522 | 1_1:-18759934 | None:intergenic |
| AAGTTGAAAACCCGAAAGGG+CGG | 0.657125 | 1_1:+18761560 | Msa0012530:CDS |
| TTACTCCCCAGGATGATCTG+TGG | 0.680398 | 1_1:+18761468 | Msa0012530:CDS |
| ATTGAGCTGCATCAACCACA+GGG | 0.682058 | 1_1:+18760204 | Msa0012530:CDS |
| TTATACTGGTGAAGGAAGTG+TGG | 0.711055 | 1_1:+18759813 | Msa0012530:CDS |
| TCATAGGTTGTCAATCAGCG+GGG | 0.724611 | 1_1:-18761601 | None:intergenic |
| ATTGACCACAGATCATCCTG+GGG | 0.742957 | 1_1:-18761473 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGTTTAAAATATTTAATGAA+AGG | - | chr1_1:18760272-18760291 | None:intergenic | 10.0% |
| !!! | ATATGGAAATAATATTATTT+TGG | + | chr1_1:18760974-18760993 | Msa0012530:intron | 10.0% |
| !!! | TGTTTAAAATATTTAATGAA+AGG | - | chr1_1:18760272-18760291 | None:intergenic | 10.0% |
| !!! | ATATGGAAATAATATTATTT+TGG | + | chr1_1:18760974-18760993 | Msa0012530:intron | 10.0% |
| !! | AATTTCTTGATAAAATCTAA+GGG | + | chr1_1:18760621-18760640 | Msa0012530:intron | 15.0% |
| !!! | TTGATTTTTTTTTTGTATTC+CGG | + | chr1_1:18760877-18760896 | Msa0012530:intron | 15.0% |
| !! | AAAAAAAAACAGAATGAAAA+TGG | + | chr1_1:18761506-18761525 | Msa0012530:CDS | 15.0% |
| !! | AATTTCTTGATAAAATCTAA+GGG | + | chr1_1:18760621-18760640 | Msa0012530:intron | 15.0% |
| !!! | TTGATTTTTTTTTTGTATTC+CGG | + | chr1_1:18760877-18760896 | Msa0012530:intron | 15.0% |
| !! | AAAAAAAAACAGAATGAAAA+TGG | + | chr1_1:18761506-18761525 | Msa0012530:CDS | 15.0% |
| !!! | ATATCAAGAATGATTTTATC+AGG | + | chr1_1:18760450-18760469 | Msa0012530:intron | 20.0% |
| !! | TAAATAAGACTGAAATCTAA+GGG | - | chr1_1:18760508-18760527 | None:intergenic | 20.0% |
| !! | ATAAATAAGACTGAAATCTA+AGG | - | chr1_1:18760509-18760528 | None:intergenic | 20.0% |
| !! | TCATTAGCTAACATTAATTT+CGG | + | chr1_1:18760595-18760614 | Msa0012530:intron | 20.0% |
| !! | CAATTTCTTGATAAAATCTA+AGG | + | chr1_1:18760620-18760639 | Msa0012530:intron | 20.0% |
| !!! | TGATTTTTTTTTTGTATTCC+GGG | + | chr1_1:18760878-18760897 | Msa0012530:intron | 20.0% |
| !!! | TAGTTTATGGAGTATTAATA+TGG | + | chr1_1:18760957-18760976 | Msa0012530:intron | 20.0% |
| !!! | AAAATGGTAATTTTATTGGT+TGG | - | chr1_1:18761155-18761174 | None:intergenic | 20.0% |
| !!! | TTGGAAAATGGTAATTTTAT+TGG | - | chr1_1:18761159-18761178 | None:intergenic | 20.0% |
| !!! | ATATCAAGAATGATTTTATC+AGG | + | chr1_1:18760450-18760469 | Msa0012530:intron | 20.0% |
| !! | TAAATAAGACTGAAATCTAA+GGG | - | chr1_1:18760508-18760527 | None:intergenic | 20.0% |
| !! | ATAAATAAGACTGAAATCTA+AGG | - | chr1_1:18760509-18760528 | None:intergenic | 20.0% |
| !! | TCATTAGCTAACATTAATTT+CGG | + | chr1_1:18760595-18760614 | Msa0012530:intron | 20.0% |
| !! | CAATTTCTTGATAAAATCTA+AGG | + | chr1_1:18760620-18760639 | Msa0012530:intron | 20.0% |
| !!! | TGATTTTTTTTTTGTATTCC+GGG | + | chr1_1:18760878-18760897 | Msa0012530:intron | 20.0% |
| !!! | TAGTTTATGGAGTATTAATA+TGG | + | chr1_1:18760957-18760976 | Msa0012530:intron | 20.0% |
| !!! | AAAATGGTAATTTTATTGGT+TGG | - | chr1_1:18761155-18761174 | None:intergenic | 20.0% |
| !!! | TTGGAAAATGGTAATTTTAT+TGG | - | chr1_1:18761159-18761178 | None:intergenic | 20.0% |
| !! | AGTAAAACAATTGAGTTGTA+TGG | + | chr1_1:18759742-18759761 | Msa0012530:CDS | 25.0% |
| !! | ATATTTGTAGAGCATTATAC+TGG | + | chr1_1:18759799-18759818 | Msa0012530:CDS | 25.0% |
| ! | AAAACATGTTACATTCATGA+TGG | + | chr1_1:18759906-18759925 | Msa0012530:CDS | 25.0% |
| ! | GAACTCCTATTTAAAAGTTA+GGG | + | chr1_1:18759960-18759979 | Msa0012530:CDS | 25.0% |
| !! | CATTTCCCTAACTTTTAAAT+AGG | - | chr1_1:18759968-18759987 | None:intergenic | 25.0% |
| ! | CTATTTAAAAGTTAGGGAAA+TGG | + | chr1_1:18759966-18759985 | Msa0012530:CDS | 25.0% |
| ! | AGGAAAGATTCTCTATATTA+TGG | + | chr1_1:18760070-18760089 | Msa0012530:CDS | 25.0% |
| ! | AAGATTCTCTATATTATGGA+AGG | + | chr1_1:18760074-18760093 | Msa0012530:CDS | 25.0% |
| !!! | GTTTGAACTTCTTATTTTCA+TGG | - | chr1_1:18760155-18760174 | None:intergenic | 25.0% |
| ! | AGCTTTCATATGAGAATATT+TGG | + | chr1_1:18760178-18760197 | Msa0012530:CDS | 25.0% |
| ! | TCCATATGAATTATGAACAA+TGG | + | chr1_1:18760382-18760401 | Msa0012530:intron | 25.0% |
| ! | ACCATTGTTCATAATTCATA+TGG | - | chr1_1:18760386-18760405 | None:intergenic | 25.0% |
| ! | ATATGAATTATGAACAATGG+TGG | + | chr1_1:18760385-18760404 | Msa0012530:intron | 25.0% |
| ! | CATTAGCTAACATTAATTTC+GGG | + | chr1_1:18760596-18760615 | Msa0012530:intron | 25.0% |
| !! | TGTCATGATATATCTGATTT+TGG | + | chr1_1:18760723-18760742 | Msa0012530:intron | 25.0% |
| ! | AGACATTGACATTATCAAAT+AGG | - | chr1_1:18761310-18761329 | None:intergenic | 25.0% |
| !! | AGTAAAACAATTGAGTTGTA+TGG | + | chr1_1:18759742-18759761 | Msa0012530:CDS | 25.0% |
| !! | ATATTTGTAGAGCATTATAC+TGG | + | chr1_1:18759799-18759818 | Msa0012530:CDS | 25.0% |
| ! | AAAACATGTTACATTCATGA+TGG | + | chr1_1:18759906-18759925 | Msa0012530:CDS | 25.0% |
| ! | GAACTCCTATTTAAAAGTTA+GGG | + | chr1_1:18759960-18759979 | Msa0012530:CDS | 25.0% |
| !! | CATTTCCCTAACTTTTAAAT+AGG | - | chr1_1:18759968-18759987 | None:intergenic | 25.0% |
| ! | CTATTTAAAAGTTAGGGAAA+TGG | + | chr1_1:18759966-18759985 | Msa0012530:CDS | 25.0% |
| ! | AGGAAAGATTCTCTATATTA+TGG | + | chr1_1:18760070-18760089 | Msa0012530:CDS | 25.0% |
| ! | AAGATTCTCTATATTATGGA+AGG | + | chr1_1:18760074-18760093 | Msa0012530:CDS | 25.0% |
| !!! | GTTTGAACTTCTTATTTTCA+TGG | - | chr1_1:18760155-18760174 | None:intergenic | 25.0% |
| ! | AGCTTTCATATGAGAATATT+TGG | + | chr1_1:18760178-18760197 | Msa0012530:CDS | 25.0% |
| ! | TCCATATGAATTATGAACAA+TGG | + | chr1_1:18760382-18760401 | Msa0012530:intron | 25.0% |
| ! | ACCATTGTTCATAATTCATA+TGG | - | chr1_1:18760386-18760405 | None:intergenic | 25.0% |
| ! | ATATGAATTATGAACAATGG+TGG | + | chr1_1:18760385-18760404 | Msa0012530:intron | 25.0% |
| ! | CATTAGCTAACATTAATTTC+GGG | + | chr1_1:18760596-18760615 | Msa0012530:intron | 25.0% |
| !! | TGTCATGATATATCTGATTT+TGG | + | chr1_1:18760723-18760742 | Msa0012530:intron | 25.0% |
| ! | AGACATTGACATTATCAAAT+AGG | - | chr1_1:18761310-18761329 | None:intergenic | 25.0% |
| TGAATAATTGCAAATGCTCT+TGG | - | chr1_1:18759874-18759893 | None:intergenic | 30.0% | |
| GGAACTCCTATTTAAAAGTT+AGG | + | chr1_1:18759959-18759978 | Msa0012530:CDS | 30.0% | |
| ! | GACGATGTTAAACTGTATTT+TGG | + | chr1_1:18760033-18760052 | Msa0012530:CDS | 30.0% |
| ATTCTCTATATTATGGAAGG+TGG | + | chr1_1:18760077-18760096 | Msa0012530:CDS | 30.0% | |
| !! | TGCAAAGTATCTATTGATTC+AGG | + | chr1_1:18760233-18760252 | Msa0012530:CDS | 30.0% |
| AGAAAGATTCAAGAATGACA+TGG | - | chr1_1:18760658-18760677 | None:intergenic | 30.0% | |
| !!! | CTTTGAGTAGTTTTGTCTTT+AGG | + | chr1_1:18760824-18760843 | Msa0012530:intron | 30.0% |
| TAAACTAACAATGTTCCACA+AGG | - | chr1_1:18760944-18760963 | None:intergenic | 30.0% | |
| ! | TGTGGAACATTGTTAGTTTA+TGG | + | chr1_1:18760944-18760963 | Msa0012530:intron | 30.0% |
| !!! | TTATTTTGGTTTGTAGCTCA+AGG | + | chr1_1:18760988-18761007 | Msa0012530:intron | 30.0% |
| GATTTACAAAGCTTGGAAAA+TGG | - | chr1_1:18761171-18761190 | None:intergenic | 30.0% | |
| TTTCAATACATGTTACAAGC+AGG | + | chr1_1:18761445-18761464 | Msa0012530:intron | 30.0% | |
| TGAATAATTGCAAATGCTCT+TGG | - | chr1_1:18759874-18759893 | None:intergenic | 30.0% | |
| GGAACTCCTATTTAAAAGTT+AGG | + | chr1_1:18759959-18759978 | Msa0012530:CDS | 30.0% | |
| ! | GACGATGTTAAACTGTATTT+TGG | + | chr1_1:18760033-18760052 | Msa0012530:CDS | 30.0% |
| ATTCTCTATATTATGGAAGG+TGG | + | chr1_1:18760077-18760096 | Msa0012530:CDS | 30.0% | |
| !! | TGCAAAGTATCTATTGATTC+AGG | + | chr1_1:18760233-18760252 | Msa0012530:CDS | 30.0% |
| AGAAAGATTCAAGAATGACA+TGG | - | chr1_1:18760658-18760677 | None:intergenic | 30.0% | |
| !!! | CTTTGAGTAGTTTTGTCTTT+AGG | + | chr1_1:18760824-18760843 | Msa0012530:intron | 30.0% |
| TAAACTAACAATGTTCCACA+AGG | - | chr1_1:18760944-18760963 | None:intergenic | 30.0% | |
| ! | TGTGGAACATTGTTAGTTTA+TGG | + | chr1_1:18760944-18760963 | Msa0012530:intron | 30.0% |
| !!! | TTATTTTGGTTTGTAGCTCA+AGG | + | chr1_1:18760988-18761007 | Msa0012530:intron | 30.0% |
| GATTTACAAAGCTTGGAAAA+TGG | - | chr1_1:18761171-18761190 | None:intergenic | 30.0% | |
| TTTCAATACATGTTACAAGC+AGG | + | chr1_1:18761445-18761464 | Msa0012530:intron | 30.0% | |
| GTTGCTATGAAGATTAGAGT+AGG | + | chr1_1:18759835-18759854 | Msa0012530:CDS | 35.0% | |
| ATGAAGATTAGAGTAGGCAA+AGG | + | chr1_1:18759841-18759860 | Msa0012530:CDS | 35.0% | |
| !! | CAATTTAGTTCTGCTAGGTA+AGG | - | chr1_1:18759932-18759951 | None:intergenic | 35.0% |
| TACCTAGCAGAACTAAATTG+CGG | + | chr1_1:18759932-18759951 | Msa0012530:CDS | 35.0% | |
| AGATATTGATCCAAAGCCAA+GGG | + | chr1_1:18759993-18760012 | Msa0012530:CDS | 35.0% | |
| ! | TGGATGCTAGTGTAGATTTT+GGG | + | chr1_1:18760097-18760116 | Msa0012530:CDS | 35.0% |
| TAGCTAATGAAATCTCAGCA+TGG | - | chr1_1:18760585-18760604 | None:intergenic | 35.0% | |
| AGTAGTCATCTAACTTTGTC+AGG | + | chr1_1:18760761-18760780 | Msa0012530:intron | 35.0% | |
| AGAGTTTCAAACAATAGCAC+AGG | - | chr1_1:18761243-18761262 | None:intergenic | 35.0% | |
| GTTGCTATGAAGATTAGAGT+AGG | + | chr1_1:18759835-18759854 | Msa0012530:CDS | 35.0% | |
| ATGAAGATTAGAGTAGGCAA+AGG | + | chr1_1:18759841-18759860 | Msa0012530:CDS | 35.0% | |
| !! | CAATTTAGTTCTGCTAGGTA+AGG | - | chr1_1:18759932-18759951 | None:intergenic | 35.0% |
| TACCTAGCAGAACTAAATTG+CGG | + | chr1_1:18759932-18759951 | Msa0012530:CDS | 35.0% | |
| AGATATTGATCCAAAGCCAA+GGG | + | chr1_1:18759993-18760012 | Msa0012530:CDS | 35.0% | |
| ! | TGGATGCTAGTGTAGATTTT+GGG | + | chr1_1:18760097-18760116 | Msa0012530:CDS | 35.0% |
| TAGCTAATGAAATCTCAGCA+TGG | - | chr1_1:18760585-18760604 | None:intergenic | 35.0% | |
| AGTAGTCATCTAACTTTGTC+AGG | + | chr1_1:18760761-18760780 | Msa0012530:intron | 35.0% | |
| AGAGTTTCAAACAATAGCAC+AGG | - | chr1_1:18761243-18761262 | None:intergenic | 35.0% | |
| GAGACACGTTCACAAAAGAA+GGG | - | chr1_1:18759771-18759790 | None:intergenic | 40.0% | |
| TGAGACACGTTCACAAAAGA+AGG | - | chr1_1:18759772-18759791 | None:intergenic | 40.0% | |
| ! | GTAGAGCATTATACTGGTGA+AGG | + | chr1_1:18759805-18759824 | Msa0012530:CDS | 40.0% |
| TTATACTGGTGAAGGAAGTG+TGG | + | chr1_1:18759813-18759832 | Msa0012530:CDS | 40.0% | |
| !! | AACCGCAATTTAGTTCTGCT+AGG | - | chr1_1:18759937-18759956 | None:intergenic | 40.0% |
| AGCAGAACTAAATTGCGGTT+CGG | + | chr1_1:18759937-18759956 | Msa0012530:CDS | 40.0% | |
| GAGATATTGATCCAAAGCCA+AGG | + | chr1_1:18759992-18760011 | Msa0012530:CDS | 40.0% | |
| !! | TTTTGGCTGTCAGATCTCAA+AGG | + | chr1_1:18760050-18760069 | Msa0012530:CDS | 40.0% |
| ! | GTGGATGCTAGTGTAGATTT+TGG | + | chr1_1:18760096-18760115 | Msa0012530:CDS | 40.0% |
| !!! | GCTAGTGTAGATTTTGGGAT+TGG | + | chr1_1:18760102-18760121 | Msa0012530:CDS | 40.0% |
| ! | TTGGGATTGGTATGAGAAAG+TGG | + | chr1_1:18760115-18760134 | Msa0012530:CDS | 40.0% |
| ! | TACTTTGCAGTTTTACCCTG+TGG | - | chr1_1:18760222-18760241 | None:intergenic | 40.0% |
| TAATGAAATCTCAGCATGGC+CGG | - | chr1_1:18760581-18760600 | None:intergenic | 40.0% | |
| CTTCACGGATTTACAAAGCT+TGG | - | chr1_1:18761178-18761197 | None:intergenic | 40.0% | |
| ! | GCTAAGTTGAAAACCCGAAA+GGG | + | chr1_1:18761557-18761576 | Msa0012530:CDS | 40.0% |
| GAGACACGTTCACAAAAGAA+GGG | - | chr1_1:18759771-18759790 | None:intergenic | 40.0% | |
| TGAGACACGTTCACAAAAGA+AGG | - | chr1_1:18759772-18759791 | None:intergenic | 40.0% | |
| ! | GTAGAGCATTATACTGGTGA+AGG | + | chr1_1:18759805-18759824 | Msa0012530:CDS | 40.0% |
| TTATACTGGTGAAGGAAGTG+TGG | + | chr1_1:18759813-18759832 | Msa0012530:CDS | 40.0% | |
| !! | AACCGCAATTTAGTTCTGCT+AGG | - | chr1_1:18759937-18759956 | None:intergenic | 40.0% |
| AGCAGAACTAAATTGCGGTT+CGG | + | chr1_1:18759937-18759956 | Msa0012530:CDS | 40.0% | |
| GAGATATTGATCCAAAGCCA+AGG | + | chr1_1:18759992-18760011 | Msa0012530:CDS | 40.0% | |
| !! | TTTTGGCTGTCAGATCTCAA+AGG | + | chr1_1:18760050-18760069 | Msa0012530:CDS | 40.0% |
| ! | GTGGATGCTAGTGTAGATTT+TGG | + | chr1_1:18760096-18760115 | Msa0012530:CDS | 40.0% |
| !!! | GCTAGTGTAGATTTTGGGAT+TGG | + | chr1_1:18760102-18760121 | Msa0012530:CDS | 40.0% |
| ! | TTGGGATTGGTATGAGAAAG+TGG | + | chr1_1:18760115-18760134 | Msa0012530:CDS | 40.0% |
| ! | TACTTTGCAGTTTTACCCTG+TGG | - | chr1_1:18760222-18760241 | None:intergenic | 40.0% |
| TAATGAAATCTCAGCATGGC+CGG | - | chr1_1:18760581-18760600 | None:intergenic | 40.0% | |
| CTTCACGGATTTACAAAGCT+TGG | - | chr1_1:18761178-18761197 | None:intergenic | 40.0% | |
| ! | GCTAAGTTGAAAACCCGAAA+GGG | + | chr1_1:18761557-18761576 | Msa0012530:CDS | 40.0% |
| GCAGAACTAAATTGCGGTTC+GGG | + | chr1_1:18759938-18759957 | Msa0012530:CDS | 45.0% | |
| AAACTGTCCAAGAATGCCCT+TGG | - | chr1_1:18760012-18760031 | None:intergenic | 45.0% | |
| ATTGAGCTGCATCAACCACA+GGG | + | chr1_1:18760204-18760223 | Msa0012530:CDS | 45.0% | |
| GAAGAGTGAAAGTCAGCCAA+GGG | - | chr1_1:18761206-18761225 | None:intergenic | 45.0% | |
| AGAAGAGTGAAAGTCAGCCA+AGG | - | chr1_1:18761207-18761226 | None:intergenic | 45.0% | |
| TGAAAGCAAACCTGAGCAAC+AGG | + | chr1_1:18761376-18761395 | Msa0012530:intron | 45.0% | |
| GAAAGCAAACCTGAGCAACA+GGG | + | chr1_1:18761377-18761396 | Msa0012530:intron | 45.0% | |
| TGAAATGTACCCTGTTGCTC+AGG | - | chr1_1:18761389-18761408 | None:intergenic | 45.0% | |
| ATTGACCACAGATCATCCTG+GGG | - | chr1_1:18761476-18761495 | None:intergenic | 45.0% | |
| CATTGACCACAGATCATCCT+GGG | - | chr1_1:18761477-18761496 | None:intergenic | 45.0% | |
| ! | CGCTAAGTTGAAAACCCGAA+AGG | + | chr1_1:18761556-18761575 | Msa0012530:CDS | 45.0% |
| AAGTTGAAAACCCGAAAGGG+CGG | + | chr1_1:18761560-18761579 | Msa0012530:CDS | 45.0% | |
| GCAGAACTAAATTGCGGTTC+GGG | + | chr1_1:18759938-18759957 | Msa0012530:CDS | 45.0% | |
| AAACTGTCCAAGAATGCCCT+TGG | - | chr1_1:18760012-18760031 | None:intergenic | 45.0% | |
| ATTGAGCTGCATCAACCACA+GGG | + | chr1_1:18760204-18760223 | Msa0012530:CDS | 45.0% | |
| GAAGAGTGAAAGTCAGCCAA+GGG | - | chr1_1:18761206-18761225 | None:intergenic | 45.0% | |
| AGAAGAGTGAAAGTCAGCCA+AGG | - | chr1_1:18761207-18761226 | None:intergenic | 45.0% | |
| TGAAAGCAAACCTGAGCAAC+AGG | + | chr1_1:18761376-18761395 | Msa0012530:intron | 45.0% | |
| GAAAGCAAACCTGAGCAACA+GGG | + | chr1_1:18761377-18761396 | Msa0012530:intron | 45.0% | |
| TGAAATGTACCCTGTTGCTC+AGG | - | chr1_1:18761389-18761408 | None:intergenic | 45.0% | |
| ATTGACCACAGATCATCCTG+GGG | - | chr1_1:18761476-18761495 | None:intergenic | 45.0% | |
| CATTGACCACAGATCATCCT+GGG | - | chr1_1:18761477-18761496 | None:intergenic | 45.0% | |
| ! | CGCTAAGTTGAAAACCCGAA+AGG | + | chr1_1:18761556-18761575 | Msa0012530:CDS | 45.0% |
| AAGTTGAAAACCCGAAAGGG+CGG | + | chr1_1:18761560-18761579 | Msa0012530:CDS | 45.0% | |
| !!! | AACAAAATTTAAAATAAAAA+AGG | - | chr1_1:18760309-18760328 | None:intergenic | 5.0% |
| !!! | TAATAGATATATATATTTTT+AGG | + | chr1_1:18760417-18760436 | Msa0012530:intron | 5.0% |
| !!! | AACAAAATTTAAAATAAAAA+AGG | - | chr1_1:18760309-18760328 | None:intergenic | 5.0% |
| !!! | TAATAGATATATATATTTTT+AGG | + | chr1_1:18760417-18760436 | Msa0012530:intron | 5.0% |
| !! | TCCAAAGCCAAGGGCATTCT+TGG | + | chr1_1:18760002-18760021 | Msa0012530:CDS | 50.0% |
| TCCAAGAATGCCCTTGGCTT+TGG | - | chr1_1:18760006-18760025 | None:intergenic | 50.0% | |
| GATTGAGCTGCATCAACCAC+AGG | + | chr1_1:18760203-18760222 | Msa0012530:CDS | 50.0% | |
| TCAGCATGGCCGGAAATCAT+GGG | - | chr1_1:18760571-18760590 | None:intergenic | 50.0% | |
| TTGTGCATGCAGAGGATACC+CGG | - | chr1_1:18760899-18760918 | None:intergenic | 50.0% | |
| ATCCTCTGCATGCACAAGTG+CGG | + | chr1_1:18760902-18760921 | Msa0012530:intron | 50.0% | |
| CAATGTTCCACAAGGCTCGA+TGG | - | chr1_1:18760936-18760955 | None:intergenic | 50.0% | |
| AATCCGTGAAGTCATGCCCT+TGG | + | chr1_1:18761187-18761206 | Msa0012530:intron | 50.0% | |
| TTACAAGCAGGTTACTCCCC+AGG | + | chr1_1:18761457-18761476 | Msa0012530:intron | 50.0% | |
| TTACTCCCCAGGATGATCTG+TGG | + | chr1_1:18761468-18761487 | Msa0012530:CDS | 50.0% | |
| CCATTGACCACAGATCATCC+TGG | - | chr1_1:18761478-18761497 | None:intergenic | 50.0% | |
| CCAGGATGATCTGTGGTCAA+TGG | + | chr1_1:18761475-18761494 | Msa0012530:CDS | 50.0% | |
| ! | TTTTGCCTAAGCCGCCCTTT+CGG | - | chr1_1:18761574-18761593 | None:intergenic | 50.0% |
| !! | TCCAAAGCCAAGGGCATTCT+TGG | + | chr1_1:18760002-18760021 | Msa0012530:CDS | 50.0% |
| TCCAAGAATGCCCTTGGCTT+TGG | - | chr1_1:18760006-18760025 | None:intergenic | 50.0% | |
| GATTGAGCTGCATCAACCAC+AGG | + | chr1_1:18760203-18760222 | Msa0012530:CDS | 50.0% | |
| TCAGCATGGCCGGAAATCAT+GGG | - | chr1_1:18760571-18760590 | None:intergenic | 50.0% | |
| TTGTGCATGCAGAGGATACC+CGG | - | chr1_1:18760899-18760918 | None:intergenic | 50.0% | |
| ATCCTCTGCATGCACAAGTG+CGG | + | chr1_1:18760902-18760921 | Msa0012530:intron | 50.0% | |
| CAATGTTCCACAAGGCTCGA+TGG | - | chr1_1:18760936-18760955 | None:intergenic | 50.0% | |
| AATCCGTGAAGTCATGCCCT+TGG | + | chr1_1:18761187-18761206 | Msa0012530:intron | 50.0% | |
| TTACAAGCAGGTTACTCCCC+AGG | + | chr1_1:18761457-18761476 | Msa0012530:intron | 50.0% | |
| TTACTCCCCAGGATGATCTG+TGG | + | chr1_1:18761468-18761487 | Msa0012530:CDS | 50.0% | |
| CCATTGACCACAGATCATCC+TGG | - | chr1_1:18761478-18761497 | None:intergenic | 50.0% | |
| CCAGGATGATCTGTGGTCAA+TGG | + | chr1_1:18761475-18761494 | Msa0012530:CDS | 50.0% | |
| ! | TTTTGCCTAAGCCGCCCTTT+CGG | - | chr1_1:18761574-18761593 | None:intergenic | 50.0% |
| ACCCACCACCCCATGATTTC+CGG | + | chr1_1:18760559-18760578 | Msa0012530:intron | 55.0% | |
| CAGCATGGCCGGAAATCATG+GGG | - | chr1_1:18760570-18760589 | None:intergenic | 55.0% | |
| CTCAGCATGGCCGGAAATCA+TGG | - | chr1_1:18760572-18760591 | None:intergenic | 55.0% | |
| GACTGATCCATCGAGCCTTG+TGG | + | chr1_1:18760926-18760945 | Msa0012530:intron | 55.0% | |
| ! | CAGCCAAGGGCATGACTTCA+CGG | - | chr1_1:18761193-18761212 | None:intergenic | 55.0% |
| AAAACCCGAAAGGGCGGCTT+AGG | + | chr1_1:18761566-18761585 | Msa0012530:CDS | 55.0% | |
| TTTGCCTAAGCCGCCCTTTC+GGG | - | chr1_1:18761573-18761592 | None:intergenic | 55.0% | |
| ACCCACCACCCCATGATTTC+CGG | + | chr1_1:18760559-18760578 | Msa0012530:intron | 55.0% | |
| CAGCATGGCCGGAAATCATG+GGG | - | chr1_1:18760570-18760589 | None:intergenic | 55.0% | |
| CTCAGCATGGCCGGAAATCA+TGG | - | chr1_1:18760572-18760591 | None:intergenic | 55.0% | |
| GACTGATCCATCGAGCCTTG+TGG | + | chr1_1:18760926-18760945 | Msa0012530:intron | 55.0% | |
| ! | CAGCCAAGGGCATGACTTCA+CGG | - | chr1_1:18761193-18761212 | None:intergenic | 55.0% |
| AAAACCCGAAAGGGCGGCTT+AGG | + | chr1_1:18761566-18761585 | Msa0012530:CDS | 55.0% | |
| TTTGCCTAAGCCGCCCTTTC+GGG | - | chr1_1:18761573-18761592 | None:intergenic | 55.0% | |
| GCCGGAAATCATGGGGTGGT+GGG | - | chr1_1:18760563-18760582 | None:intergenic | 60.0% | |
| CATGGCCGGAAATCATGGGG+TGG | - | chr1_1:18760567-18760586 | None:intergenic | 60.0% | |
| CTCCGCACTTGTGCATGCAG+AGG | - | chr1_1:18760907-18760926 | None:intergenic | 60.0% | |
| GCCGGAAATCATGGGGTGGT+GGG | - | chr1_1:18760563-18760582 | None:intergenic | 60.0% | |
| CATGGCCGGAAATCATGGGG+TGG | - | chr1_1:18760567-18760586 | None:intergenic | 60.0% | |
| CTCCGCACTTGTGCATGCAG+AGG | - | chr1_1:18760907-18760926 | None:intergenic | 60.0% | |
| GGCCGGAAATCATGGGGTGG+TGG | - | chr1_1:18760564-18760583 | None:intergenic | 65.0% | |
| GGCCGGAAATCATGGGGTGG+TGG | - | chr1_1:18760564-18760583 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 18759733 | 18761613 | 18759733 | ID=Msa0012530;Name=Msa0012530 |
| chr1_1 | mRNA | 18759733 | 18761613 | 18759733 | ID=Msa0012530-mRNA-1;Parent=Msa0012530;Name=Msa0012530-mRNA-1;_AED=0.35;_eAED=0.35;_QI=0|0|0|0.5|1|1|2|0|222 |
| chr1_1 | exon | 18759733 | 18760254 | 18759733 | ID=Msa0012530-mRNA-1:exon:6923;Parent=Msa0012530-mRNA-1 |
| chr1_1 | exon | 18761467 | 18761613 | 18761467 | ID=Msa0012530-mRNA-1:exon:6924;Parent=Msa0012530-mRNA-1 |
| chr1_1 | CDS | 18759733 | 18760254 | 18759733 | ID=Msa0012530-mRNA-1:cds;Parent=Msa0012530-mRNA-1 |
| chr1_1 | CDS | 18761467 | 18761613 | 18761467 | ID=Msa0012530-mRNA-1:cds;Parent=Msa0012530-mRNA-1 |
| Gene Sequence |
| Protein sequence |
