Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0773240 | XP_003615193.2 | 74.691 | 324 | 43 | 4 | 1 | 309 | 1 | 300 | 1.34e-166 | 475 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0773240 | sp|Q9C7T4|BH096_ARATH | 48.358 | 335 | 123 | 10 | 1 | 304 | 1 | 316 | 1.18e-84 | 260 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0773240 | G7KAJ7 | 74.691 | 324 | 43 | 4 | 1 | 309 | 1 | 300 | 6.42e-167 | 475 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0773240 | TF | bHLH |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0732160 | Msa0773240 | 0.869768 | 2.416890e-66 | -8.615850e-47 |
| Msa0773240 | Msa0855790 | 0.925360 | 2.039967e-90 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0773240 | MtrunA17_Chr5g0426851 | 74.691 | 324 | 43 | 4 | 1 | 309 | 1 | 300 | 1.24e-170 | 475 |
| Msa0773240 | MtrunA17_Chr3g0132471 | 52.266 | 331 | 119 | 9 | 1 | 306 | 1 | 317 | 6.05e-98 | 291 |
| Msa0773240 | MtrunA17_Chr7g0273081 | 44.164 | 317 | 147 | 11 | 1 | 306 | 14 | 311 | 3.91e-74 | 230 |
| Msa0773240 | MtrunA17_Chr8g0366551 | 52.804 | 214 | 92 | 5 | 98 | 309 | 114 | 320 | 1.85e-66 | 211 |
| Msa0773240 | MtrunA17_Chr1g0191571 | 42.683 | 328 | 156 | 9 | 1 | 304 | 14 | 333 | 1.54e-65 | 209 |
| Msa0773240 | MtrunA17_Chr8g0345871 | 44.175 | 206 | 92 | 3 | 97 | 297 | 170 | 357 | 3.70e-46 | 159 |
| Msa0773240 | MtrunA17_Chr0c01g0489461 | 41.395 | 215 | 116 | 5 | 90 | 297 | 177 | 388 | 1.97e-43 | 153 |
| Msa0773240 | MtrunA17_Chr2g0287761 | 38.636 | 176 | 104 | 2 | 108 | 283 | 1 | 172 | 4.29e-34 | 123 |
| Msa0773240 | MtrunA17_Chr1g0158941 | 30.249 | 281 | 154 | 7 | 46 | 302 | 27 | 289 | 1.54e-28 | 111 |
| Msa0773240 | MtrunA17_Chr3g0126361 | 51.515 | 66 | 27 | 2 | 78 | 139 | 68 | 132 | 3.53e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0773240 | AT1G72210.1 | 48.358 | 335 | 123 | 10 | 1 | 304 | 1 | 316 | 1.20e-85 | 260 |
| Msa0773240 | AT1G72210.2 | 46.753 | 308 | 115 | 9 | 1 | 277 | 1 | 290 | 1.10e-73 | 229 |
| Msa0773240 | AT1G22490.1 | 45.912 | 318 | 143 | 10 | 1 | 304 | 1 | 303 | 9.20e-71 | 221 |
| Msa0773240 | AT1G22490.2 | 43.986 | 291 | 135 | 9 | 1 | 277 | 1 | 277 | 3.65e-58 | 190 |
| Msa0773240 | AT5G46690.1 | 44.538 | 238 | 88 | 8 | 98 | 304 | 78 | 302 | 1.35e-42 | 149 |
| Msa0773240 | AT4G01460.1 | 39.437 | 213 | 112 | 3 | 98 | 304 | 105 | 306 | 3.34e-42 | 148 |
| Msa0773240 | AT4G01460.2 | 39.437 | 213 | 112 | 3 | 98 | 304 | 105 | 306 | 3.34e-42 | 148 |
| Msa0773240 | AT5G65320.1 | 40.097 | 207 | 109 | 2 | 104 | 304 | 98 | 295 | 3.39e-42 | 147 |
| Msa0773240 | AT2G46810.2 | 39.614 | 207 | 95 | 5 | 99 | 297 | 112 | 296 | 1.84e-39 | 140 |
| Msa0773240 | AT3G24140.2 | 38.914 | 221 | 119 | 3 | 88 | 297 | 177 | 392 | 1.96e-39 | 143 |
| Msa0773240 | AT3G24140.1 | 38.914 | 221 | 119 | 3 | 88 | 297 | 177 | 392 | 2.29e-39 | 143 |
| Msa0773240 | AT2G46810.1 | 39.614 | 207 | 95 | 5 | 99 | 297 | 184 | 368 | 7.31e-39 | 140 |
| Msa0773240 | AT2G46810.3 | 39.614 | 207 | 95 | 5 | 99 | 297 | 172 | 356 | 7.53e-39 | 140 |
| Msa0773240 | AT3G61950.2 | 38.462 | 208 | 99 | 6 | 97 | 297 | 116 | 301 | 4.12e-38 | 137 |
| Msa0773240 | AT3G61950.1 | 38.462 | 208 | 99 | 6 | 97 | 297 | 167 | 352 | 1.60e-37 | 137 |
| Msa0773240 | AT3G61950.6 | 39.655 | 174 | 78 | 4 | 97 | 264 | 116 | 268 | 3.51e-36 | 132 |
| Msa0773240 | AT5G46690.2 | 43.333 | 210 | 78 | 6 | 98 | 277 | 78 | 276 | 1.22e-35 | 130 |
| Msa0773240 | AT5G65320.2 | 40.107 | 187 | 97 | 2 | 104 | 284 | 98 | 275 | 1.25e-35 | 130 |
| Msa0773240 | AT3G61950.3 | 39.655 | 174 | 78 | 4 | 97 | 264 | 167 | 319 | 1.91e-35 | 131 |
| Msa0773240 | AT2G46810.4 | 41.618 | 173 | 73 | 3 | 99 | 264 | 112 | 263 | 2.27e-35 | 130 |
| Msa0773240 | AT3G06120.1 | 34.737 | 190 | 99 | 5 | 108 | 283 | 1 | 179 | 1.05e-28 | 109 |
| Msa0773240 | AT5G53210.1 | 58.730 | 63 | 26 | 0 | 106 | 168 | 100 | 162 | 3.26e-19 | 87.4 |
| Msa0773240 | AT5G53210.2 | 58.730 | 63 | 26 | 0 | 106 | 168 | 100 | 162 | 4.03e-19 | 87.0 |
| Msa0773240 | AT3G61950.4 | 65.116 | 43 | 15 | 0 | 97 | 139 | 167 | 209 | 7.87e-13 | 67.0 |
| Msa0773240 | AT3G61950.5 | 65.116 | 43 | 15 | 0 | 97 | 139 | 167 | 209 | 7.87e-13 | 67.0 |
Find 63 sgRNAs with CRISPR-Local
Find 248 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCATAATCTCCTTTCAAAT+TGG | 0.176896 | 5_2:-48016539 | Msa0773240:CDS |
| TGCCTCCTTCTTATGCAAAA+AGG | 0.226402 | 5_2:-48016311 | Msa0773240:CDS |
| CATGTTTCCTCAATACTCTA+TGG | 0.258942 | 5_2:-48015816 | Msa0773240:CDS |
| TGGGAAGAGTGGTAGTTTCT+TGG | 0.293807 | 5_2:+48016508 | None:intergenic |
| CATCCACACTGGAAACATTA+AGG | 0.344730 | 5_2:+48015615 | None:intergenic |
| TCATAATCTCCTTTCAAATT+GGG | 0.357599 | 5_2:-48016538 | Msa0773240:CDS |
| CCATGCCACGTGACTGATTA+TGG | 0.383936 | 5_2:+48015759 | None:intergenic |
| TGAGCTATCACGTAGAATTC+AGG | 0.385207 | 5_2:-48014750 | Msa0773240:CDS |
| GTTGTTGGGATTCAAAATCT+TGG | 0.395613 | 5_2:-48015653 | Msa0773240:CDS |
| ACTTGGAGTGGTTTCAACTA+AGG | 0.406246 | 5_2:+48016638 | None:intergenic |
| GGGAAGAGTGGTAGTTTCTT+GGG | 0.407169 | 5_2:+48016509 | None:intergenic |
| ATGTTTCCTCAATACTCTAT+GGG | 0.408818 | 5_2:-48015815 | Msa0773240:CDS |
| AGGTCAAGTAATGGCCTTAG+AGG | 0.417204 | 5_2:-48016715 | None:intergenic |
| CGGTGCAATTAACTTCTTGA+AGG | 0.418841 | 5_2:-48015951 | Msa0773240:CDS |
| CCACTCCAAGTGAAGGATCT+TGG | 0.429067 | 5_2:-48016626 | Msa0773240:CDS |
| CAGGTTATGAAGATGGTTGT+TGG | 0.441455 | 5_2:-48015668 | Msa0773240:CDS |
| AGGTTATGAAGATGGTTGTT+GGG | 0.442208 | 5_2:-48015667 | Msa0773240:CDS |
| CCAAGATCCTTCACTTGGAG+TGG | 0.454095 | 5_2:+48016626 | None:intergenic |
| GTCGTCGTTTGCTCTGACGA+GGG | 0.455391 | 5_2:+48016451 | None:intergenic |
| CTGTAAATCAATGGATATTG+TGG | 0.467398 | 5_2:+48016681 | None:intergenic |
| GGCAGATATAGAAGTGACTT+TGG | 0.474900 | 5_2:-48015738 | Msa0773240:CDS |
| TGGCTCCAAGATCCTTCACT+TGG | 0.493996 | 5_2:+48016621 | None:intergenic |
| TGTTGTGGTGGATGCAAAAG+TGG | 0.496117 | 5_2:+48016482 | None:intergenic |
| TTTGCTCTGACGAGGGGCTG+TGG | 0.500724 | 5_2:+48016458 | None:intergenic |
| AATTAATAATAGGTAGAAGA+AGG | 0.501607 | 5_2:-48014818 | Msa0773240:intron |
| CGTGACTGATTATGGTTGGT+AGG | 0.510486 | 5_2:+48015767 | None:intergenic |
| CTGCAATGTGAGTCATCCTC+TGG | 0.511278 | 5_2:+48016391 | None:intergenic |
| TGCATAAGAAGGAGGCATCA+AGG | 0.514555 | 5_2:+48016317 | None:intergenic |
| TCTTTGCAACTGTAAATCAA+TGG | 0.515148 | 5_2:+48016672 | None:intergenic |
| CCTTGTCTCGGTTAGTGCTA+AGG | 0.528899 | 5_2:-48015585 | Msa0773240:intron |
| AAGGAGGCATCAAGGATTTG+AGG | 0.530586 | 5_2:+48016325 | None:intergenic |
| ACATAATCTACAACTCATGA+AGG | 0.534004 | 5_2:-48015921 | Msa0773240:CDS |
| GGGAAGAATCCCAATTTGAA+AGG | 0.535414 | 5_2:+48016529 | None:intergenic |
| TTGTTTGGCAACCGTAGTTG+TGG | 0.536558 | 5_2:+48016601 | None:intergenic |
| GGTGATCAAGCATCAATAGT+TGG | 0.540135 | 5_2:-48015974 | Msa0773240:CDS |
| ATTAATAATAGGTAGAAGAA+GGG | 0.541316 | 5_2:-48014817 | Msa0773240:intron |
| AAAAGTGGAAGTGGGAAGAG+TGG | 0.541468 | 5_2:+48016497 | None:intergenic |
| CAACTACTGAACACAGTGGA+TGG | 0.542124 | 5_2:-48014791 | Msa0773240:CDS |
| AGGGGCTGTGGTTGTTGTGG+TGG | 0.542969 | 5_2:+48016470 | None:intergenic |
| ACGAGGGGCTGTGGTTGTTG+TGG | 0.561823 | 5_2:+48016467 | None:intergenic |
| GGTGGATGCAAAAGTGGAAG+TGG | 0.562310 | 5_2:+48016488 | None:intergenic |
| CCATAATCAGTCACGTGGCA+TGG | 0.565688 | 5_2:-48015759 | Msa0773240:CDS |
| CGTCGTCGTTTGCTCTGACG+AGG | 0.567064 | 5_2:+48016450 | None:intergenic |
| ACAAGGACAGGTTATGAAGA+TGG | 0.569307 | 5_2:-48015675 | Msa0773240:CDS |
| GTGACTGATTATGGTTGGTA+GGG | 0.576193 | 5_2:+48015768 | None:intergenic |
| GTTGAAACCACTCCAAGTGA+AGG | 0.604132 | 5_2:-48016633 | Msa0773240:CDS |
| GGGTAGCACGTGATGTTCTG+AGG | 0.605537 | 5_2:+48015788 | None:intergenic |
| TCGTCGTTTGCTCTGACGAG+GGG | 0.613990 | 5_2:+48016452 | None:intergenic |
| CCTTAGCACTAACCGAGACA+AGG | 0.614421 | 5_2:+48015585 | None:intergenic |
| GGATGATAATGTCCTTGTCT+CGG | 0.618077 | 5_2:-48015597 | Msa0773240:CDS |
| GGTGCACCCATAGAGTATTG+AGG | 0.621516 | 5_2:+48015809 | None:intergenic |
| GTGGATGCAAAAGTGGAAGT+GGG | 0.621519 | 5_2:+48016489 | None:intergenic |
| GGATCTTGGAGCCACAACTA+CGG | 0.621648 | 5_2:-48016612 | Msa0773240:CDS |
| ACACCTTAATGTTTCCAGTG+TGG | 0.628319 | 5_2:-48015618 | Msa0773240:CDS |
| AGGAGGAAATCGAGAGCCAG+AGG | 0.636953 | 5_2:-48016407 | Msa0773240:CDS |
| CATAATCTACAACTCATGAA+GGG | 0.646610 | 5_2:-48015920 | Msa0773240:CDS |
| GCTATCACGTAGAATTCAGG+TGG | 0.646782 | 5_2:-48014747 | Msa0773240:CDS |
| AAGGACATTATCATCCACAC+TGG | 0.650900 | 5_2:+48015604 | None:intergenic |
| GCCACGTGACTGATTATGGT+TGG | 0.656195 | 5_2:+48015763 | None:intergenic |
| GATCAAGCATCAATAGTTGG+CGG | 0.664504 | 5_2:-48015971 | Msa0773240:CDS |
| ACCAACCATAATCAGTCACG+TGG | 0.705729 | 5_2:-48015764 | Msa0773240:CDS |
| TCAAGGATTTGAGGACATCG+AGG | 0.738437 | 5_2:+48016334 | None:intergenic |
| GTGTCAACTACTGAACACAG+TGG | 0.768612 | 5_2:-48014795 | Msa0773240:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGAAAATTTTGATTTTTTTT+TGG | + | chr5_2:48015406-48015425 | None:intergenic | 10.0% |
| !! | AAAAATTAATCACTATTAAA+CGG | - | chr5_2:48016075-48016094 | Msa0773240:intron | 10.0% |
| !! | AACTTTATAAATATAATATG+TGG | - | chr5_2:48016105-48016124 | Msa0773240:intron | 10.0% |
| !! | TATAATTTAAACAAGTAATA+AGG | + | chr5_2:48016522-48016541 | None:intergenic | 10.0% |
| !!! | AATTTATTTTTTTTGACAAA+AGG | - | chr5_2:48016572-48016591 | Msa0773240:CDS | 10.0% |
| !! | TATATATTGGAATTAATAAT+AGG | - | chr5_2:48016604-48016623 | Msa0773240:CDS | 10.0% |
| !!! | TGAAAATTTTGATTTTTTTT+TGG | + | chr5_2:48015406-48015425 | None:intergenic | 10.0% |
| !! | AAAAATTAATCACTATTAAA+CGG | - | chr5_2:48016075-48016094 | Msa0773240:intron | 10.0% |
| !! | AACTTTATAAATATAATATG+TGG | - | chr5_2:48016105-48016124 | Msa0773240:intron | 10.0% |
| !! | TATAATTTAAACAAGTAATA+AGG | + | chr5_2:48016522-48016541 | None:intergenic | 10.0% |
| !!! | AATTTATTTTTTTTGACAAA+AGG | - | chr5_2:48016572-48016591 | Msa0773240:CDS | 10.0% |
| !! | TATATATTGGAATTAATAAT+AGG | - | chr5_2:48016604-48016623 | Msa0773240:CDS | 10.0% |
| !! | AAGGTTACTAATTTATATAT+TGG | - | chr5_2:48016591-48016610 | Msa0773240:CDS | 15.0% |
| !! | AAGGTTACTAATTTATATAT+TGG | - | chr5_2:48016591-48016610 | Msa0773240:CDS | 15.0% |
| !!! | TGTGTTATAAAATTGTTGTT+GGG | + | chr5_2:48015350-48015369 | None:intergenic | 20.0% |
| !! | ATGTGTTATAAAATTGTTGT+TGG | + | chr5_2:48015351-48015370 | None:intergenic | 20.0% |
| !!! | ATTTTTGTTGAGAAAATTGT+TGG | + | chr5_2:48016061-48016080 | None:intergenic | 20.0% |
| !! | AAATTCAATACTATACCATT+TGG | - | chr5_2:48016160-48016179 | Msa0773240:intron | 20.0% |
| !!! | GAAAATAGTGAAAAACATTT+TGG | - | chr5_2:48016544-48016563 | Msa0773240:CDS | 20.0% |
| !! | AATTAATAATAGGTAGAAGA+AGG | - | chr5_2:48016614-48016633 | Msa0773240:CDS | 20.0% |
| !! | ATTAATAATAGGTAGAAGAA+GGG | - | chr5_2:48016615-48016634 | Msa0773240:CDS | 20.0% |
| !!! | TGTGTTATAAAATTGTTGTT+GGG | + | chr5_2:48015350-48015369 | None:intergenic | 20.0% |
| !! | ATGTGTTATAAAATTGTTGT+TGG | + | chr5_2:48015351-48015370 | None:intergenic | 20.0% |
| !!! | ATTTTTGTTGAGAAAATTGT+TGG | + | chr5_2:48016061-48016080 | None:intergenic | 20.0% |
| !! | AAATTCAATACTATACCATT+TGG | - | chr5_2:48016160-48016179 | Msa0773240:intron | 20.0% |
| !!! | GAAAATAGTGAAAAACATTT+TGG | - | chr5_2:48016544-48016563 | Msa0773240:CDS | 20.0% |
| !! | AATTAATAATAGGTAGAAGA+AGG | - | chr5_2:48016614-48016633 | Msa0773240:CDS | 20.0% |
| !! | ATTAATAATAGGTAGAAGAA+GGG | - | chr5_2:48016615-48016634 | Msa0773240:CDS | 20.0% |
| ! | ATCATAATCTCCTTTCAAAT+TGG | - | chr5_2:48014893-48014912 | Msa0773240:intron | 25.0% |
| ! | TCATAATCTCCTTTCAAATT+GGG | - | chr5_2:48014894-48014913 | Msa0773240:intron | 25.0% |
| ! | TGTTTCATAAACACAATTGT+TGG | - | chr5_2:48015201-48015220 | Msa0773240:intron | 25.0% |
| !! | GTGTTATAAAATTGTTGTTG+GGG | + | chr5_2:48015349-48015368 | None:intergenic | 25.0% |
| ! | TAAACCACATGTAGAATTTA+GGG | + | chr5_2:48015430-48015449 | None:intergenic | 25.0% |
| ! | TTAAACCACATGTAGAATTT+AGG | + | chr5_2:48015431-48015450 | None:intergenic | 25.0% |
| ! | TACATGTGGTTTAAAAAACA+GGG | - | chr5_2:48015437-48015456 | Msa0773240:intron | 25.0% |
| ! | AACATGAAAAACTCAGTAAA+AGG | + | chr5_2:48015602-48015621 | None:intergenic | 25.0% |
| ! | ATAATGTTGAAAAAACGACA+AGG | - | chr5_2:48015740-48015759 | Msa0773240:CDS | 25.0% |
| ! | TATAAAATTCACTGTCAACA+AGG | - | chr5_2:48015925-48015944 | Msa0773240:CDS | 25.0% |
| ! | ATAAAATTCACTGTCAACAA+GGG | - | chr5_2:48015926-48015945 | Msa0773240:CDS | 25.0% |
| ! | AATCAAGTGATAAAAAGACT+TGG | - | chr5_2:48015952-48015971 | Msa0773240:CDS | 25.0% |
| ! | CTTGTGTAATATTTACCAAA+TGG | + | chr5_2:48016178-48016197 | None:intergenic | 25.0% |
| ! | ATAAGGTTTAAAAATTGACG+TGG | + | chr5_2:48016505-48016524 | None:intergenic | 25.0% |
| ! | ATCATAATCTCCTTTCAAAT+TGG | - | chr5_2:48014893-48014912 | Msa0773240:intron | 25.0% |
| ! | TCATAATCTCCTTTCAAATT+GGG | - | chr5_2:48014894-48014913 | Msa0773240:intron | 25.0% |
| ! | TGTTTCATAAACACAATTGT+TGG | - | chr5_2:48015201-48015220 | Msa0773240:intron | 25.0% |
| !! | GTGTTATAAAATTGTTGTTG+GGG | + | chr5_2:48015349-48015368 | None:intergenic | 25.0% |
| ! | TAAACCACATGTAGAATTTA+GGG | + | chr5_2:48015430-48015449 | None:intergenic | 25.0% |
| ! | TTAAACCACATGTAGAATTT+AGG | + | chr5_2:48015431-48015450 | None:intergenic | 25.0% |
| ! | TACATGTGGTTTAAAAAACA+GGG | - | chr5_2:48015437-48015456 | Msa0773240:intron | 25.0% |
| ! | AACATGAAAAACTCAGTAAA+AGG | + | chr5_2:48015602-48015621 | None:intergenic | 25.0% |
| ! | ATAATGTTGAAAAAACGACA+AGG | - | chr5_2:48015740-48015759 | Msa0773240:CDS | 25.0% |
| ! | TATAAAATTCACTGTCAACA+AGG | - | chr5_2:48015925-48015944 | Msa0773240:CDS | 25.0% |
| ! | ATAAAATTCACTGTCAACAA+GGG | - | chr5_2:48015926-48015945 | Msa0773240:CDS | 25.0% |
| ! | AATCAAGTGATAAAAAGACT+TGG | - | chr5_2:48015952-48015971 | Msa0773240:CDS | 25.0% |
| ! | CTTGTGTAATATTTACCAAA+TGG | + | chr5_2:48016178-48016197 | None:intergenic | 25.0% |
| ! | ATAAGGTTTAAAAATTGACG+TGG | + | chr5_2:48016505-48016524 | None:intergenic | 25.0% |
| CTGTAAATCAATGGATATTG+TGG | + | chr5_2:48014754-48014773 | None:intergenic | 30.0% | |
| TCTTTGCAACTGTAAATCAA+TGG | + | chr5_2:48014763-48014782 | None:intergenic | 30.0% | |
| ! | ATTACCCTTTTTGCATAAGA+AGG | + | chr5_2:48015129-48015148 | None:intergenic | 30.0% |
| CTACATGTGGTTTAAAAAAC+AGG | - | chr5_2:48015436-48015455 | Msa0773240:intron | 30.0% | |
| ACATAATCTACAACTCATGA+AGG | - | chr5_2:48015511-48015530 | Msa0773240:intron | 30.0% | |
| CATAATCTACAACTCATGAA+GGG | - | chr5_2:48015512-48015531 | Msa0773240:intron | 30.0% | |
| ATGAAAAACTCAGTAAAAGG+TGG | + | chr5_2:48015599-48015618 | None:intergenic | 30.0% | |
| ATGTTTCCTCAATACTCTAT+GGG | - | chr5_2:48015617-48015636 | Msa0773240:CDS | 30.0% | |
| CTCGTTAAATAAATGATGAG+TGG | - | chr5_2:48015976-48015995 | Msa0773240:CDS | 30.0% | |
| !! | ATCTACTCTAAAATCACAGA+TGG | + | chr5_2:48016314-48016333 | None:intergenic | 30.0% |
| CTGTAAATCAATGGATATTG+TGG | + | chr5_2:48014754-48014773 | None:intergenic | 30.0% | |
| TCTTTGCAACTGTAAATCAA+TGG | + | chr5_2:48014763-48014782 | None:intergenic | 30.0% | |
| ! | ATTACCCTTTTTGCATAAGA+AGG | + | chr5_2:48015129-48015148 | None:intergenic | 30.0% |
| CTACATGTGGTTTAAAAAAC+AGG | - | chr5_2:48015436-48015455 | Msa0773240:intron | 30.0% | |
| ACATAATCTACAACTCATGA+AGG | - | chr5_2:48015511-48015530 | Msa0773240:intron | 30.0% | |
| CATAATCTACAACTCATGAA+GGG | - | chr5_2:48015512-48015531 | Msa0773240:intron | 30.0% | |
| ATGAAAAACTCAGTAAAAGG+TGG | + | chr5_2:48015599-48015618 | None:intergenic | 30.0% | |
| ATGTTTCCTCAATACTCTAT+GGG | - | chr5_2:48015617-48015636 | Msa0773240:CDS | 30.0% | |
| CTCGTTAAATAAATGATGAG+TGG | - | chr5_2:48015976-48015995 | Msa0773240:CDS | 30.0% | |
| !! | ATCTACTCTAAAATCACAGA+TGG | + | chr5_2:48016314-48016333 | None:intergenic | 30.0% |
| TGGAAAAACTATAGCCTCTA+AGG | + | chr5_2:48014734-48014753 | None:intergenic | 35.0% | |
| ! | GATCTTCTTCGTCTTTTGTT+TGG | + | chr5_2:48014849-48014868 | None:intergenic | 35.0% |
| CACTGTGAATGCAAAAAATG+AGG | - | chr5_2:48015005-48015024 | Msa0773240:intron | 35.0% | |
| TGTGAATGCAAAAAATGAGG+AGG | - | chr5_2:48015008-48015027 | Msa0773240:intron | 35.0% | |
| !!! | CCTCAATTTTTAGTCGATGT+GGG | + | chr5_2:48015250-48015269 | None:intergenic | 35.0% |
| !!! | TCCTCAATTTTTAGTCGATG+TGG | + | chr5_2:48015251-48015270 | None:intergenic | 35.0% |
| ! | ACTTTGATGCCTTATGGTTT+TGG | - | chr5_2:48015272-48015291 | Msa0773240:intron | 35.0% |
| ! | CTTTGATGCCTTATGGTTTT+GGG | - | chr5_2:48015273-48015292 | Msa0773240:intron | 35.0% |
| TCAACCCTAAATTCTACATG+TGG | - | chr5_2:48015423-48015442 | Msa0773240:intron | 35.0% | |
| CATGTTTCCTCAATACTCTA+TGG | - | chr5_2:48015616-48015635 | Msa0773240:CDS | 35.0% | |
| AGGTTATGAAGATGGTTGTT+GGG | - | chr5_2:48015765-48015784 | Msa0773240:CDS | 35.0% | |
| GTTGTTGGGATTCAAAATCT+TGG | - | chr5_2:48015779-48015798 | Msa0773240:CDS | 35.0% | |
| TAGAGAAATACTCGATTGAG+AGG | - | chr5_2:48016018-48016037 | Msa0773240:intron | 35.0% | |
| AGAGAAATACTCGATTGAGA+GGG | - | chr5_2:48016019-48016038 | Msa0773240:intron | 35.0% | |
| AAAATTGTTGGAGACATGGT+AGG | + | chr5_2:48016049-48016068 | None:intergenic | 35.0% | |
| TGAGAAAATTGTTGGAGACA+TGG | + | chr5_2:48016053-48016072 | None:intergenic | 35.0% | |
| !! | ATTTGCTGTTTGCATCATGA+CGG | - | chr5_2:48016422-48016441 | Msa0773240:CDS | 35.0% |
| AACAGAGAATAAGGTGAACT+AGG | - | chr5_2:48016455-48016474 | Msa0773240:CDS | 35.0% | |
| ACAGAGAATAAGGTGAACTA+GGG | - | chr5_2:48016456-48016475 | Msa0773240:CDS | 35.0% | |
| ! | AAAAATTGACGTGGAGGTTT+TGG | + | chr5_2:48016496-48016515 | None:intergenic | 35.0% |
| AGGTTTAAAAATTGACGTGG+AGG | + | chr5_2:48016502-48016521 | None:intergenic | 35.0% | |
| TGGAAAAACTATAGCCTCTA+AGG | + | chr5_2:48014734-48014753 | None:intergenic | 35.0% | |
| ! | GATCTTCTTCGTCTTTTGTT+TGG | + | chr5_2:48014849-48014868 | None:intergenic | 35.0% |
| CACTGTGAATGCAAAAAATG+AGG | - | chr5_2:48015005-48015024 | Msa0773240:intron | 35.0% | |
| TGTGAATGCAAAAAATGAGG+AGG | - | chr5_2:48015008-48015027 | Msa0773240:intron | 35.0% | |
| !!! | CCTCAATTTTTAGTCGATGT+GGG | + | chr5_2:48015250-48015269 | None:intergenic | 35.0% |
| !!! | TCCTCAATTTTTAGTCGATG+TGG | + | chr5_2:48015251-48015270 | None:intergenic | 35.0% |
| ! | ACTTTGATGCCTTATGGTTT+TGG | - | chr5_2:48015272-48015291 | Msa0773240:intron | 35.0% |
| ! | CTTTGATGCCTTATGGTTTT+GGG | - | chr5_2:48015273-48015292 | Msa0773240:intron | 35.0% |
| TCAACCCTAAATTCTACATG+TGG | - | chr5_2:48015423-48015442 | Msa0773240:intron | 35.0% | |
| CATGTTTCCTCAATACTCTA+TGG | - | chr5_2:48015616-48015635 | Msa0773240:CDS | 35.0% | |
| AGGTTATGAAGATGGTTGTT+GGG | - | chr5_2:48015765-48015784 | Msa0773240:CDS | 35.0% | |
| GTTGTTGGGATTCAAAATCT+TGG | - | chr5_2:48015779-48015798 | Msa0773240:CDS | 35.0% | |
| TAGAGAAATACTCGATTGAG+AGG | - | chr5_2:48016018-48016037 | Msa0773240:intron | 35.0% | |
| AGAGAAATACTCGATTGAGA+GGG | - | chr5_2:48016019-48016038 | Msa0773240:intron | 35.0% | |
| AAAATTGTTGGAGACATGGT+AGG | + | chr5_2:48016049-48016068 | None:intergenic | 35.0% | |
| TGAGAAAATTGTTGGAGACA+TGG | + | chr5_2:48016053-48016072 | None:intergenic | 35.0% | |
| !! | ATTTGCTGTTTGCATCATGA+CGG | - | chr5_2:48016422-48016441 | Msa0773240:CDS | 35.0% |
| AACAGAGAATAAGGTGAACT+AGG | - | chr5_2:48016455-48016474 | Msa0773240:CDS | 35.0% | |
| ACAGAGAATAAGGTGAACTA+GGG | - | chr5_2:48016456-48016475 | Msa0773240:CDS | 35.0% | |
| ! | AAAAATTGACGTGGAGGTTT+TGG | + | chr5_2:48016496-48016515 | None:intergenic | 35.0% |
| AGGTTTAAAAATTGACGTGG+AGG | + | chr5_2:48016502-48016521 | None:intergenic | 35.0% | |
| ACTTGGAGTGGTTTCAACTA+AGG | + | chr5_2:48014797-48014816 | None:intergenic | 40.0% | |
| GGGAAGAATCCCAATTTGAA+AGG | + | chr5_2:48014906-48014925 | None:intergenic | 40.0% | |
| TGCCTCCTTCTTATGCAAAA+AGG | - | chr5_2:48015121-48015140 | Msa0773240:intron | 40.0% | |
| GCCTCCTTCTTATGCAAAAA+GGG | - | chr5_2:48015122-48015141 | Msa0773240:intron | 40.0% | |
| ! | ACCCTTTTTGCATAAGAAGG+AGG | + | chr5_2:48015126-48015145 | None:intergenic | 40.0% |
| ! | CCCACATCGACTAAAAATTG+AGG | - | chr5_2:48015247-48015266 | Msa0773240:intron | 40.0% |
| GAGGAAACTTTGATGCCTTA+TGG | - | chr5_2:48015266-48015285 | Msa0773240:intron | 40.0% | |
| GGTGATCAAGCATCAATAGT+TGG | - | chr5_2:48015458-48015477 | Msa0773240:intron | 40.0% | |
| GATCAAGCATCAATAGTTGG+CGG | - | chr5_2:48015461-48015480 | Msa0773240:intron | 40.0% | |
| CGGTGCAATTAACTTCTTGA+AGG | - | chr5_2:48015481-48015500 | Msa0773240:intron | 40.0% | |
| ! | GTGACTGATTATGGTTGGTA+GGG | + | chr5_2:48015667-48015686 | None:intergenic | 40.0% |
| GGCAGATATAGAAGTGACTT+TGG | - | chr5_2:48015694-48015713 | Msa0773240:CDS | 40.0% | |
| GTTGAAAAAACGACAAGGAC+AGG | - | chr5_2:48015745-48015764 | Msa0773240:CDS | 40.0% | |
| ACAAGGACAGGTTATGAAGA+TGG | - | chr5_2:48015757-48015776 | Msa0773240:CDS | 40.0% | |
| CAGGTTATGAAGATGGTTGT+TGG | - | chr5_2:48015764-48015783 | Msa0773240:CDS | 40.0% | |
| ACACCTTAATGTTTCCAGTG+TGG | - | chr5_2:48015814-48015833 | Msa0773240:CDS | 40.0% | |
| CATCCACACTGGAAACATTA+AGG | + | chr5_2:48015820-48015839 | None:intergenic | 40.0% | |
| AAGGACATTATCATCCACAC+TGG | + | chr5_2:48015831-48015850 | None:intergenic | 40.0% | |
| ! | GGATGATAATGTCCTTGTCT+CGG | - | chr5_2:48015835-48015854 | Msa0773240:CDS | 40.0% |
| CGGTTAGTGCTAAGGTAAAT+TGG | - | chr5_2:48015855-48015874 | Msa0773240:CDS | 40.0% | |
| GAGAAATACTCGATTGAGAG+GGG | - | chr5_2:48016020-48016039 | Msa0773240:intron | 40.0% | |
| CGCGTACTTAACAGAGAATA+AGG | - | chr5_2:48016446-48016465 | Msa0773240:CDS | 40.0% | |
| TGAGCTATCACGTAGAATTC+AGG | - | chr5_2:48016682-48016701 | Msa0773240:CDS | 40.0% | |
| ACTTGGAGTGGTTTCAACTA+AGG | + | chr5_2:48014797-48014816 | None:intergenic | 40.0% | |
| GGGAAGAATCCCAATTTGAA+AGG | + | chr5_2:48014906-48014925 | None:intergenic | 40.0% | |
| TGCCTCCTTCTTATGCAAAA+AGG | - | chr5_2:48015121-48015140 | Msa0773240:intron | 40.0% | |
| GCCTCCTTCTTATGCAAAAA+GGG | - | chr5_2:48015122-48015141 | Msa0773240:intron | 40.0% | |
| ! | ACCCTTTTTGCATAAGAAGG+AGG | + | chr5_2:48015126-48015145 | None:intergenic | 40.0% |
| ! | CCCACATCGACTAAAAATTG+AGG | - | chr5_2:48015247-48015266 | Msa0773240:intron | 40.0% |
| GAGGAAACTTTGATGCCTTA+TGG | - | chr5_2:48015266-48015285 | Msa0773240:intron | 40.0% | |
| GGTGATCAAGCATCAATAGT+TGG | - | chr5_2:48015458-48015477 | Msa0773240:intron | 40.0% | |
| GATCAAGCATCAATAGTTGG+CGG | - | chr5_2:48015461-48015480 | Msa0773240:intron | 40.0% | |
| CGGTGCAATTAACTTCTTGA+AGG | - | chr5_2:48015481-48015500 | Msa0773240:intron | 40.0% | |
| ! | GTGACTGATTATGGTTGGTA+GGG | + | chr5_2:48015667-48015686 | None:intergenic | 40.0% |
| GGCAGATATAGAAGTGACTT+TGG | - | chr5_2:48015694-48015713 | Msa0773240:CDS | 40.0% | |
| GTTGAAAAAACGACAAGGAC+AGG | - | chr5_2:48015745-48015764 | Msa0773240:CDS | 40.0% | |
| ACAAGGACAGGTTATGAAGA+TGG | - | chr5_2:48015757-48015776 | Msa0773240:CDS | 40.0% | |
| CAGGTTATGAAGATGGTTGT+TGG | - | chr5_2:48015764-48015783 | Msa0773240:CDS | 40.0% | |
| ACACCTTAATGTTTCCAGTG+TGG | - | chr5_2:48015814-48015833 | Msa0773240:CDS | 40.0% | |
| CATCCACACTGGAAACATTA+AGG | + | chr5_2:48015820-48015839 | None:intergenic | 40.0% | |
| AAGGACATTATCATCCACAC+TGG | + | chr5_2:48015831-48015850 | None:intergenic | 40.0% | |
| ! | GGATGATAATGTCCTTGTCT+CGG | - | chr5_2:48015835-48015854 | Msa0773240:CDS | 40.0% |
| CGGTTAGTGCTAAGGTAAAT+TGG | - | chr5_2:48015855-48015874 | Msa0773240:CDS | 40.0% | |
| GAGAAATACTCGATTGAGAG+GGG | - | chr5_2:48016020-48016039 | Msa0773240:intron | 40.0% | |
| CGCGTACTTAACAGAGAATA+AGG | - | chr5_2:48016446-48016465 | Msa0773240:CDS | 40.0% | |
| TGAGCTATCACGTAGAATTC+AGG | - | chr5_2:48016682-48016701 | Msa0773240:CDS | 40.0% | |
| GTTGAAACCACTCCAAGTGA+AGG | - | chr5_2:48014799-48014818 | Msa0773240:CDS | 45.0% | |
| TTGTTTGGCAACCGTAGTTG+TGG | + | chr5_2:48014834-48014853 | None:intergenic | 45.0% | |
| GGGAAGAGTGGTAGTTTCTT+GGG | + | chr5_2:48014926-48014945 | None:intergenic | 45.0% | |
| TGGGAAGAGTGGTAGTTTCT+TGG | + | chr5_2:48014927-48014946 | None:intergenic | 45.0% | |
| AAAAGTGGAAGTGGGAAGAG+TGG | + | chr5_2:48014938-48014957 | None:intergenic | 45.0% | |
| GTGGATGCAAAAGTGGAAGT+GGG | + | chr5_2:48014946-48014965 | None:intergenic | 45.0% | |
| !! | TGTTGTGGTGGATGCAAAAG+TGG | + | chr5_2:48014953-48014972 | None:intergenic | 45.0% |
| TCAAGGATTTGAGGACATCG+AGG | + | chr5_2:48015101-48015120 | None:intergenic | 45.0% | |
| !! | AAGGAGGCATCAAGGATTTG+AGG | + | chr5_2:48015110-48015129 | None:intergenic | 45.0% |
| !! | TGCATAAGAAGGAGGCATCA+AGG | + | chr5_2:48015118-48015137 | None:intergenic | 45.0% |
| CACTCGTACCCAAAACCATA+AGG | + | chr5_2:48015284-48015303 | None:intergenic | 45.0% | |
| !!! | TATGGTTTTGGGTACGAGTG+TGG | - | chr5_2:48015284-48015303 | Msa0773240:intron | 45.0% |
| ! | AATTGTTGTTGGGGAGTCTG+AGG | + | chr5_2:48015340-48015359 | None:intergenic | 45.0% |
| CGTGACTGATTATGGTTGGT+AGG | + | chr5_2:48015668-48015687 | None:intergenic | 45.0% | |
| ACCAACCATAATCAGTCACG+TGG | - | chr5_2:48015668-48015687 | Msa0773240:CDS | 45.0% | |
| GTGTCAACTACTGAACACAG+TGG | - | chr5_2:48016637-48016656 | Msa0773240:CDS | 45.0% | |
| CAACTACTGAACACAGTGGA+TGG | - | chr5_2:48016641-48016660 | Msa0773240:CDS | 45.0% | |
| GCTATCACGTAGAATTCAGG+TGG | - | chr5_2:48016685-48016704 | Msa0773240:CDS | 45.0% | |
| GTTGAAACCACTCCAAGTGA+AGG | - | chr5_2:48014799-48014818 | Msa0773240:CDS | 45.0% | |
| TTGTTTGGCAACCGTAGTTG+TGG | + | chr5_2:48014834-48014853 | None:intergenic | 45.0% | |
| GGGAAGAGTGGTAGTTTCTT+GGG | + | chr5_2:48014926-48014945 | None:intergenic | 45.0% | |
| TGGGAAGAGTGGTAGTTTCT+TGG | + | chr5_2:48014927-48014946 | None:intergenic | 45.0% | |
| AAAAGTGGAAGTGGGAAGAG+TGG | + | chr5_2:48014938-48014957 | None:intergenic | 45.0% | |
| GTGGATGCAAAAGTGGAAGT+GGG | + | chr5_2:48014946-48014965 | None:intergenic | 45.0% | |
| !! | TGTTGTGGTGGATGCAAAAG+TGG | + | chr5_2:48014953-48014972 | None:intergenic | 45.0% |
| TCAAGGATTTGAGGACATCG+AGG | + | chr5_2:48015101-48015120 | None:intergenic | 45.0% | |
| !! | AAGGAGGCATCAAGGATTTG+AGG | + | chr5_2:48015110-48015129 | None:intergenic | 45.0% |
| !! | TGCATAAGAAGGAGGCATCA+AGG | + | chr5_2:48015118-48015137 | None:intergenic | 45.0% |
| CACTCGTACCCAAAACCATA+AGG | + | chr5_2:48015284-48015303 | None:intergenic | 45.0% | |
| !!! | TATGGTTTTGGGTACGAGTG+TGG | - | chr5_2:48015284-48015303 | Msa0773240:intron | 45.0% |
| ! | AATTGTTGTTGGGGAGTCTG+AGG | + | chr5_2:48015340-48015359 | None:intergenic | 45.0% |
| CGTGACTGATTATGGTTGGT+AGG | + | chr5_2:48015668-48015687 | None:intergenic | 45.0% | |
| ACCAACCATAATCAGTCACG+TGG | - | chr5_2:48015668-48015687 | Msa0773240:CDS | 45.0% | |
| GTGTCAACTACTGAACACAG+TGG | - | chr5_2:48016637-48016656 | Msa0773240:CDS | 45.0% | |
| CAACTACTGAACACAGTGGA+TGG | - | chr5_2:48016641-48016660 | Msa0773240:CDS | 45.0% | |
| GCTATCACGTAGAATTCAGG+TGG | - | chr5_2:48016685-48016704 | Msa0773240:CDS | 45.0% | |
| CCAAGATCCTTCACTTGGAG+TGG | + | chr5_2:48014809-48014828 | None:intergenic | 50.0% | |
| CCACTCCAAGTGAAGGATCT+TGG | - | chr5_2:48014806-48014825 | Msa0773240:CDS | 50.0% | |
| TGGCTCCAAGATCCTTCACT+TGG | + | chr5_2:48014814-48014833 | None:intergenic | 50.0% | |
| GGATCTTGGAGCCACAACTA+CGG | - | chr5_2:48014820-48014839 | Msa0773240:intron | 50.0% | |
| GGTGGATGCAAAAGTGGAAG+TGG | + | chr5_2:48014947-48014966 | None:intergenic | 50.0% | |
| CTGCAATGTGAGTCATCCTC+TGG | + | chr5_2:48015044-48015063 | None:intergenic | 50.0% | |
| TCCTAGACGTTTAGCGCATC+CGG | - | chr5_2:48015311-48015330 | Msa0773240:intron | 50.0% | |
| !! | GGTGCACCCATAGAGTATTG+AGG | + | chr5_2:48015626-48015645 | None:intergenic | 50.0% |
| GCCACGTGACTGATTATGGT+TGG | + | chr5_2:48015672-48015691 | None:intergenic | 50.0% | |
| CCATGCCACGTGACTGATTA+TGG | + | chr5_2:48015676-48015695 | None:intergenic | 50.0% | |
| CCATAATCAGTCACGTGGCA+TGG | - | chr5_2:48015673-48015692 | Msa0773240:CDS | 50.0% | |
| CCTTAGCACTAACCGAGACA+AGG | + | chr5_2:48015850-48015869 | None:intergenic | 50.0% | |
| CCTTGTCTCGGTTAGTGCTA+AGG | - | chr5_2:48015847-48015866 | Msa0773240:CDS | 50.0% | |
| CCAAGATCCTTCACTTGGAG+TGG | + | chr5_2:48014809-48014828 | None:intergenic | 50.0% | |
| CCACTCCAAGTGAAGGATCT+TGG | - | chr5_2:48014806-48014825 | Msa0773240:CDS | 50.0% | |
| TGGCTCCAAGATCCTTCACT+TGG | + | chr5_2:48014814-48014833 | None:intergenic | 50.0% | |
| GGATCTTGGAGCCACAACTA+CGG | - | chr5_2:48014820-48014839 | Msa0773240:intron | 50.0% | |
| GGTGGATGCAAAAGTGGAAG+TGG | + | chr5_2:48014947-48014966 | None:intergenic | 50.0% | |
| CTGCAATGTGAGTCATCCTC+TGG | + | chr5_2:48015044-48015063 | None:intergenic | 50.0% | |
| TCCTAGACGTTTAGCGCATC+CGG | - | chr5_2:48015311-48015330 | Msa0773240:intron | 50.0% | |
| !! | GGTGCACCCATAGAGTATTG+AGG | + | chr5_2:48015626-48015645 | None:intergenic | 50.0% |
| GCCACGTGACTGATTATGGT+TGG | + | chr5_2:48015672-48015691 | None:intergenic | 50.0% | |
| CCATGCCACGTGACTGATTA+TGG | + | chr5_2:48015676-48015695 | None:intergenic | 50.0% | |
| CCATAATCAGTCACGTGGCA+TGG | - | chr5_2:48015673-48015692 | Msa0773240:CDS | 50.0% | |
| CCTTAGCACTAACCGAGACA+AGG | + | chr5_2:48015850-48015869 | None:intergenic | 50.0% | |
| CCTTGTCTCGGTTAGTGCTA+AGG | - | chr5_2:48015847-48015866 | Msa0773240:CDS | 50.0% | |
| TCGTCGTTTGCTCTGACGAG+GGG | + | chr5_2:48014983-48015002 | None:intergenic | 55.0% | |
| GTCGTCGTTTGCTCTGACGA+GGG | + | chr5_2:48014984-48015003 | None:intergenic | 55.0% | |
| AGGAGGAAATCGAGAGCCAG+AGG | - | chr5_2:48015025-48015044 | Msa0773240:intron | 55.0% | |
| CCTAGACGTTTAGCGCATCC+GGG | - | chr5_2:48015312-48015331 | Msa0773240:intron | 55.0% | |
| GGGTAGCACGTGATGTTCTG+AGG | + | chr5_2:48015647-48015666 | None:intergenic | 55.0% | |
| TCGTCGTTTGCTCTGACGAG+GGG | + | chr5_2:48014983-48015002 | None:intergenic | 55.0% | |
| GTCGTCGTTTGCTCTGACGA+GGG | + | chr5_2:48014984-48015003 | None:intergenic | 55.0% | |
| AGGAGGAAATCGAGAGCCAG+AGG | - | chr5_2:48015025-48015044 | Msa0773240:intron | 55.0% | |
| CCTAGACGTTTAGCGCATCC+GGG | - | chr5_2:48015312-48015331 | Msa0773240:intron | 55.0% | |
| GGGTAGCACGTGATGTTCTG+AGG | + | chr5_2:48015647-48015666 | None:intergenic | 55.0% | |
| AGGGGCTGTGGTTGTTGTGG+TGG | + | chr5_2:48014965-48014984 | None:intergenic | 60.0% | |
| ACGAGGGGCTGTGGTTGTTG+TGG | + | chr5_2:48014968-48014987 | None:intergenic | 60.0% | |
| TTTGCTCTGACGAGGGGCTG+TGG | + | chr5_2:48014977-48014996 | None:intergenic | 60.0% | |
| CGTCGTCGTTTGCTCTGACG+AGG | + | chr5_2:48014985-48015004 | None:intergenic | 60.0% | |
| CCCGGATGCGCTAAACGTCT+AGG | + | chr5_2:48015315-48015334 | None:intergenic | 60.0% | |
| AGGGGCTGTGGTTGTTGTGG+TGG | + | chr5_2:48014965-48014984 | None:intergenic | 60.0% | |
| ACGAGGGGCTGTGGTTGTTG+TGG | + | chr5_2:48014968-48014987 | None:intergenic | 60.0% | |
| TTTGCTCTGACGAGGGGCTG+TGG | + | chr5_2:48014977-48014996 | None:intergenic | 60.0% | |
| CGTCGTCGTTTGCTCTGACG+AGG | + | chr5_2:48014985-48015004 | None:intergenic | 60.0% | |
| CCCGGATGCGCTAAACGTCT+AGG | + | chr5_2:48015315-48015334 | None:intergenic | 60.0% | |
| GTTGGGGAGTCTGAGGAGCC+CGG | + | chr5_2:48015333-48015352 | None:intergenic | 65.0% | |
| GTTGGGGAGTCTGAGGAGCC+CGG | + | chr5_2:48015333-48015352 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 48014727 | 48016727 | 48014727 | ID=Msa0773240;Name=Msa0773240 |
| chr5_2 | mRNA | 48014727 | 48016727 | 48014727 | ID=Msa0773240-mRNA-1;Parent=Msa0773240;Name=Msa0773240-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|0|0|0.66|1|1|3|0|309 |
| chr5_2 | exon | 48016311 | 48016727 | 48016311 | ID=Msa0773240-mRNA-1:exon:14394;Parent=Msa0773240-mRNA-1 |
| chr5_2 | exon | 48015586 | 48015996 | 48015586 | ID=Msa0773240-mRNA-1:exon:14393;Parent=Msa0773240-mRNA-1 |
| chr5_2 | exon | 48014727 | 48014828 | 48014727 | ID=Msa0773240-mRNA-1:exon:14392;Parent=Msa0773240-mRNA-1 |
| chr5_2 | CDS | 48016311 | 48016727 | 48016311 | ID=Msa0773240-mRNA-1:cds;Parent=Msa0773240-mRNA-1 |
| chr5_2 | CDS | 48015586 | 48015996 | 48015586 | ID=Msa0773240-mRNA-1:cds;Parent=Msa0773240-mRNA-1 |
| chr5_2 | CDS | 48014727 | 48014828 | 48014727 | ID=Msa0773240-mRNA-1:cds;Parent=Msa0773240-mRNA-1 |
| Gene Sequence |
| Protein sequence |
