Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0855790 | XP_003615193.2 | 75.000 | 324 | 42 | 4 | 1 | 309 | 1 | 300 | 1.01e-167 | 478 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0855790 | sp|Q9C7T4|BH096_ARATH | 48.060 | 335 | 124 | 11 | 1 | 304 | 1 | 316 | 5.87e-84 | 258 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0855790 | G7KAJ7 | 75.000 | 324 | 42 | 4 | 1 | 309 | 1 | 300 | 4.84e-168 | 478 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0855790 | TF | bHLH |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0732160 | Msa0855790 | 0.852100 | 5.758913e-61 | -8.615850e-47 |
| Msa0773240 | Msa0855790 | 0.925360 | 2.039967e-90 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0855790 | MtrunA17_Chr5g0426851 | 75.000 | 324 | 42 | 4 | 1 | 309 | 1 | 300 | 9.32e-172 | 478 |
| Msa0855790 | MtrunA17_Chr3g0132471 | 53.172 | 331 | 116 | 10 | 1 | 306 | 1 | 317 | 3.57e-99 | 294 |
| Msa0855790 | MtrunA17_Chr7g0273081 | 43.849 | 317 | 148 | 11 | 1 | 306 | 14 | 311 | 3.37e-73 | 228 |
| Msa0855790 | MtrunA17_Chr8g0366551 | 52.804 | 214 | 92 | 5 | 98 | 309 | 114 | 320 | 2.09e-66 | 211 |
| Msa0855790 | MtrunA17_Chr1g0191571 | 42.378 | 328 | 157 | 9 | 1 | 304 | 14 | 333 | 1.74e-64 | 206 |
| Msa0855790 | MtrunA17_Chr8g0345871 | 44.175 | 206 | 92 | 3 | 97 | 297 | 170 | 357 | 3.74e-46 | 159 |
| Msa0855790 | MtrunA17_Chr0c01g0489461 | 41.395 | 215 | 116 | 5 | 90 | 297 | 177 | 388 | 1.95e-43 | 153 |
| Msa0855790 | MtrunA17_Chr2g0287761 | 38.636 | 176 | 104 | 2 | 108 | 283 | 1 | 172 | 4.57e-34 | 123 |
| Msa0855790 | MtrunA17_Chr1g0158941 | 30.249 | 281 | 154 | 7 | 46 | 302 | 27 | 289 | 1.78e-28 | 111 |
| Msa0855790 | MtrunA17_Chr3g0126361 | 51.515 | 66 | 27 | 2 | 78 | 139 | 68 | 132 | 3.74e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0855790 | AT1G72210.1 | 48.060 | 335 | 124 | 11 | 1 | 304 | 1 | 316 | 5.97e-85 | 258 |
| Msa0855790 | AT1G72210.2 | 46.429 | 308 | 116 | 10 | 1 | 277 | 1 | 290 | 5.56e-73 | 227 |
| Msa0855790 | AT1G22490.1 | 44.937 | 316 | 149 | 9 | 1 | 304 | 1 | 303 | 1.16e-69 | 219 |
| Msa0855790 | AT1G22490.2 | 42.955 | 291 | 138 | 7 | 1 | 277 | 1 | 277 | 3.19e-57 | 187 |
| Msa0855790 | AT5G46690.1 | 44.538 | 238 | 88 | 8 | 98 | 304 | 78 | 302 | 1.13e-42 | 150 |
| Msa0855790 | AT4G01460.1 | 39.437 | 213 | 112 | 3 | 98 | 304 | 105 | 306 | 3.03e-42 | 148 |
| Msa0855790 | AT4G01460.2 | 39.437 | 213 | 112 | 3 | 98 | 304 | 105 | 306 | 3.03e-42 | 148 |
| Msa0855790 | AT5G65320.1 | 40.097 | 207 | 109 | 2 | 104 | 304 | 98 | 295 | 4.06e-42 | 147 |
| Msa0855790 | AT2G46810.2 | 39.614 | 207 | 95 | 5 | 99 | 297 | 112 | 296 | 1.67e-39 | 140 |
| Msa0855790 | AT3G24140.2 | 38.914 | 221 | 119 | 3 | 88 | 297 | 177 | 392 | 2.02e-39 | 143 |
| Msa0855790 | AT3G24140.1 | 38.914 | 221 | 119 | 3 | 88 | 297 | 177 | 392 | 2.06e-39 | 143 |
| Msa0855790 | AT2G46810.1 | 39.614 | 207 | 95 | 5 | 99 | 297 | 184 | 368 | 6.45e-39 | 141 |
| Msa0855790 | AT2G46810.3 | 39.614 | 207 | 95 | 5 | 99 | 297 | 172 | 356 | 6.79e-39 | 140 |
| Msa0855790 | AT3G61950.2 | 38.462 | 208 | 99 | 6 | 97 | 297 | 116 | 301 | 3.91e-38 | 137 |
| Msa0855790 | AT3G61950.1 | 38.462 | 208 | 99 | 6 | 97 | 297 | 167 | 352 | 1.72e-37 | 137 |
| Msa0855790 | AT3G61950.6 | 39.655 | 174 | 78 | 4 | 97 | 264 | 116 | 268 | 3.16e-36 | 132 |
| Msa0855790 | AT5G46690.2 | 44.076 | 211 | 75 | 7 | 98 | 277 | 78 | 276 | 1.14e-35 | 130 |
| Msa0855790 | AT5G65320.2 | 40.107 | 187 | 97 | 2 | 104 | 284 | 98 | 275 | 1.43e-35 | 130 |
| Msa0855790 | AT2G46810.4 | 41.618 | 173 | 73 | 3 | 99 | 264 | 112 | 263 | 1.86e-35 | 130 |
| Msa0855790 | AT3G61950.3 | 39.655 | 174 | 78 | 4 | 97 | 264 | 167 | 319 | 1.99e-35 | 131 |
| Msa0855790 | AT3G06120.1 | 34.737 | 190 | 99 | 5 | 108 | 283 | 1 | 179 | 1.10e-28 | 109 |
| Msa0855790 | AT5G53210.1 | 58.730 | 63 | 26 | 0 | 106 | 168 | 100 | 162 | 3.05e-19 | 87.4 |
| Msa0855790 | AT5G53210.2 | 58.730 | 63 | 26 | 0 | 106 | 168 | 100 | 162 | 3.84e-19 | 87.0 |
| Msa0855790 | AT3G61950.4 | 65.116 | 43 | 15 | 0 | 97 | 139 | 167 | 209 | 7.87e-13 | 67.0 |
| Msa0855790 | AT3G61950.5 | 65.116 | 43 | 15 | 0 | 97 | 139 | 167 | 209 | 7.87e-13 | 67.0 |
Find 64 sgRNAs with CRISPR-Local
Find 248 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCATAATCTCCTTTCAAAT+TGG | 0.176896 | 5_4:+49818270 | Msa0855790:CDS |
| TGCCTCCTTCTTATGCAAAA+AGG | 0.226402 | 5_4:+49818498 | Msa0855790:CDS |
| GTGGGAAGAGTGGTAGTTTC+TGG | 0.232175 | 5_4:-49818302 | None:intergenic |
| CATGTTTCCTCAATACTCTA+TGG | 0.258942 | 5_4:+49818993 | Msa0855790:CDS |
| CATCCACACTGGAAACATTA+AGG | 0.344730 | 5_4:-49819194 | None:intergenic |
| TCATAATCTCCTTTCAAATT+GGG | 0.357599 | 5_4:+49818271 | Msa0855790:CDS |
| CCATGCCACGTGACTGATTA+TGG | 0.383936 | 5_4:-49819050 | None:intergenic |
| TGAGCTATCACGTAGAATTC+AGG | 0.385207 | 5_4:+49820061 | Msa0855790:CDS |
| GTTGTTGGGATTCAAAATCT+TGG | 0.395613 | 5_4:+49819156 | Msa0855790:CDS |
| ACTTGGAGTGGTTTCAACTA+AGG | 0.406246 | 5_4:-49818171 | None:intergenic |
| ATGTTTCCTCAATACTCTAT+GGG | 0.408818 | 5_4:+49818994 | Msa0855790:CDS |
| TGGGAAGAGTGGTAGTTTCT+GGG | 0.409146 | 5_4:-49818301 | None:intergenic |
| AGGTCAAGTAATGGCCTTAG+AGG | 0.417204 | 5_4:+49818094 | None:intergenic |
| CGGTGCAATTAACTTCTTGA+AGG | 0.418841 | 5_4:+49818858 | Msa0855790:CDS |
| CCACTCCAAGTGAAGGATCT+TGG | 0.429067 | 5_4:+49818183 | Msa0855790:CDS |
| CAGGTTATGAAGATGGTTGT+TGG | 0.441455 | 5_4:+49819141 | Msa0855790:CDS |
| AGGTTATGAAGATGGTTGTT+GGG | 0.442208 | 5_4:+49819142 | Msa0855790:CDS |
| CCAAGATCCTTCACTTGGAG+TGG | 0.454095 | 5_4:-49818183 | None:intergenic |
| GTCGTCGTTTGCTCTGACGA+GGG | 0.455391 | 5_4:-49818358 | None:intergenic |
| CTGTAAATCAATGGATATTG+TGG | 0.467398 | 5_4:-49818128 | None:intergenic |
| GGCAGATATAGAAGTGACTT+TGG | 0.474900 | 5_4:+49819071 | Msa0855790:CDS |
| TGGCTCCAAGATCCTTCACT+TGG | 0.493996 | 5_4:-49818188 | None:intergenic |
| TGTTGTGGTGGATGCAAAAG+TGG | 0.496117 | 5_4:-49818327 | None:intergenic |
| TTTGCTCTGACGAGGGGCTG+TGG | 0.500724 | 5_4:-49818351 | None:intergenic |
| AATTAATAATAGGTAGAAGA+AGG | 0.501607 | 5_4:+49819993 | Msa0855790:intron |
| CGTGACTGATTATGGTTGGT+AGG | 0.510486 | 5_4:-49819042 | None:intergenic |
| CTGCAATGTGAGTCATCCTC+TGG | 0.511278 | 5_4:-49818418 | None:intergenic |
| TGCATAAGAAGGAGGCATCA+AGG | 0.514555 | 5_4:-49818492 | None:intergenic |
| TCTTTGCAACTGTAAATCAA+TGG | 0.515148 | 5_4:-49818137 | None:intergenic |
| GGTGATCAAGCGTCAATAGT+TGG | 0.522208 | 5_4:+49818835 | Msa0855790:CDS |
| CCTTGTCTCGGTTAGTGCTA+AGG | 0.528899 | 5_4:+49819224 | Msa0855790:CDS |
| AAGGAGGCATCAAGGATTTG+AGG | 0.530586 | 5_4:-49818484 | None:intergenic |
| ACATAATCTACAACTCATGA+AGG | 0.534004 | 5_4:+49818888 | Msa0855790:CDS |
| TTGTTTGGCAACCGTAGTTG+TGG | 0.536558 | 5_4:-49818208 | None:intergenic |
| ATTAATAATAGGTAGAAGAA+GGG | 0.541316 | 5_4:+49819994 | Msa0855790:intron |
| AAAAGTGGAAGTGGGAAGAG+TGG | 0.541468 | 5_4:-49818312 | None:intergenic |
| CAACTACTGAACACAGTGGA+TGG | 0.542124 | 5_4:+49820020 | Msa0855790:CDS |
| AGGGGCTGTGGTTGTTGTGG+TGG | 0.542969 | 5_4:-49818339 | None:intergenic |
| ACGAGGGGCTGTGGTTGTTG+TGG | 0.561823 | 5_4:-49818342 | None:intergenic |
| GGTGGATGCAAAAGTGGAAG+TGG | 0.562310 | 5_4:-49818321 | None:intergenic |
| GGGAAGAGTGGTAGTTTCTG+GGG | 0.562790 | 5_4:-49818300 | None:intergenic |
| CCATAATCAGTCACGTGGCA+TGG | 0.565688 | 5_4:+49819050 | Msa0855790:CDS |
| CGTCGTCGTTTGCTCTGACG+AGG | 0.567064 | 5_4:-49818359 | None:intergenic |
| ACAAGGACAGGTTATGAAGA+TGG | 0.569307 | 5_4:+49819134 | Msa0855790:CDS |
| GTGACTGATTATGGTTGGTA+GGG | 0.576193 | 5_4:-49819041 | None:intergenic |
| GGGAAGAATCCCAATTTGAA+AGG | 0.583370 | 5_4:-49818280 | None:intergenic |
| GTTGAAACCACTCCAAGTGA+AGG | 0.604132 | 5_4:+49818176 | Msa0855790:CDS |
| GGGTAGCACGTGATGTTCTG+AGG | 0.605537 | 5_4:-49819021 | None:intergenic |
| TCGTCGTTTGCTCTGACGAG+GGG | 0.613990 | 5_4:-49818357 | None:intergenic |
| CCTTAGCACTAACCGAGACA+AGG | 0.614421 | 5_4:-49819224 | None:intergenic |
| GGATGATAATGTCCTTGTCT+CGG | 0.618077 | 5_4:+49819212 | Msa0855790:CDS |
| GGTGCACCCATAGAGTATTG+AGG | 0.621516 | 5_4:-49819000 | None:intergenic |
| GTGGATGCAAAAGTGGAAGT+GGG | 0.621519 | 5_4:-49818320 | None:intergenic |
| GGATCTTGGAGCCACAACTA+CGG | 0.621648 | 5_4:+49818197 | Msa0855790:CDS |
| ACACCTTAATGTTTCCAGTG+TGG | 0.628319 | 5_4:+49819191 | Msa0855790:CDS |
| AGGAGGAAATCGAGAGCCAG+AGG | 0.636953 | 5_4:+49818402 | Msa0855790:CDS |
| CATAATCTACAACTCATGAA+GGG | 0.646610 | 5_4:+49818889 | Msa0855790:CDS |
| GCTATCACGTAGAATTCAGG+TGG | 0.646782 | 5_4:+49820064 | Msa0855790:CDS |
| AAGGACATTATCATCCACAC+TGG | 0.650900 | 5_4:-49819205 | None:intergenic |
| GCCACGTGACTGATTATGGT+TGG | 0.656195 | 5_4:-49819046 | None:intergenic |
| GATCAAGCGTCAATAGTTGG+CGG | 0.662112 | 5_4:+49818838 | Msa0855790:CDS |
| ACCAACCATAATCAGTCACG+TGG | 0.705729 | 5_4:+49819045 | Msa0855790:CDS |
| TCAAGGATTTGAGGACATCG+AGG | 0.738437 | 5_4:-49818475 | None:intergenic |
| GTGTCAACTACTGAACACAG+TGG | 0.768612 | 5_4:+49820016 | Msa0855790:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGAAAATTTTGATTTTTTTT+TGG | - | chr5_4:49818783-49818802 | None:intergenic | 10.0% |
| !! | AAAAATTAATCACTATTAAA+CGG | + | chr5_4:49819452-49819471 | Msa0855790:intron | 10.0% |
| !! | AACTTTATAAATATAATATG+TGG | + | chr5_4:49819482-49819501 | Msa0855790:intron | 10.0% |
| !! | TATAATTTAAACAAGTAATA+AGG | - | chr5_4:49819901-49819920 | None:intergenic | 10.0% |
| !!! | AATTTATTTTTTTTGACAAA+AGG | + | chr5_4:49819951-49819970 | Msa0855790:intron | 10.0% |
| !! | TATATATTGGAATTAATAAT+AGG | + | chr5_4:49819983-49820002 | Msa0855790:intron | 10.0% |
| !!! | TGAAAATTTTGATTTTTTTT+TGG | - | chr5_4:49818783-49818802 | None:intergenic | 10.0% |
| !! | AAAAATTAATCACTATTAAA+CGG | + | chr5_4:49819452-49819471 | Msa0855790:intron | 10.0% |
| !! | AACTTTATAAATATAATATG+TGG | + | chr5_4:49819482-49819501 | Msa0855790:intron | 10.0% |
| !! | TATAATTTAAACAAGTAATA+AGG | - | chr5_4:49819901-49819920 | None:intergenic | 10.0% |
| !!! | AATTTATTTTTTTTGACAAA+AGG | + | chr5_4:49819951-49819970 | Msa0855790:intron | 10.0% |
| !! | TATATATTGGAATTAATAAT+AGG | + | chr5_4:49819983-49820002 | Msa0855790:intron | 10.0% |
| !! | AAGGTTACTAATTTATATAT+TGG | + | chr5_4:49819970-49819989 | Msa0855790:intron | 15.0% |
| !! | AAGGTTACTAATTTATATAT+TGG | + | chr5_4:49819970-49819989 | Msa0855790:intron | 15.0% |
| !! | ATCATGTGTTATAAAATTGT+TGG | - | chr5_4:49818731-49818750 | None:intergenic | 20.0% |
| !!! | ATTTTTGTTGAGAAAATTGT+TGG | - | chr5_4:49819438-49819457 | None:intergenic | 20.0% |
| !! | AAATTCAATACTATACCATT+TGG | + | chr5_4:49819536-49819555 | Msa0855790:intron | 20.0% |
| !!! | GAAAATAGTGAAAAACATTT+TGG | + | chr5_4:49819923-49819942 | Msa0855790:intron | 20.0% |
| !! | AATTAATAATAGGTAGAAGA+AGG | + | chr5_4:49819993-49820012 | Msa0855790:intron | 20.0% |
| !! | ATTAATAATAGGTAGAAGAA+GGG | + | chr5_4:49819994-49820013 | Msa0855790:intron | 20.0% |
| !! | ATCATGTGTTATAAAATTGT+TGG | - | chr5_4:49818731-49818750 | None:intergenic | 20.0% |
| !!! | ATTTTTGTTGAGAAAATTGT+TGG | - | chr5_4:49819438-49819457 | None:intergenic | 20.0% |
| !! | AAATTCAATACTATACCATT+TGG | + | chr5_4:49819536-49819555 | Msa0855790:intron | 20.0% |
| !!! | GAAAATAGTGAAAAACATTT+TGG | + | chr5_4:49819923-49819942 | Msa0855790:intron | 20.0% |
| !! | AATTAATAATAGGTAGAAGA+AGG | + | chr5_4:49819993-49820012 | Msa0855790:intron | 20.0% |
| !! | ATTAATAATAGGTAGAAGAA+GGG | + | chr5_4:49819994-49820013 | Msa0855790:intron | 20.0% |
| ! | ATCATAATCTCCTTTCAAAT+TGG | + | chr5_4:49818270-49818289 | Msa0855790:CDS | 25.0% |
| ! | TCATAATCTCCTTTCAAATT+GGG | + | chr5_4:49818271-49818290 | Msa0855790:CDS | 25.0% |
| ! | TGTTTCATAAACACAATTGT+TGG | + | chr5_4:49818578-49818597 | Msa0855790:intron | 25.0% |
| ! | TGTGTTATAAAATTGTTGGT+GGG | - | chr5_4:49818727-49818746 | None:intergenic | 25.0% |
| ! | ATGTGTTATAAAATTGTTGG+TGG | - | chr5_4:49818728-49818747 | None:intergenic | 25.0% |
| ! | TAAACCACATGTAGAATTTA+GGG | - | chr5_4:49818807-49818826 | None:intergenic | 25.0% |
| ! | TTAAACCACATGTAGAATTT+AGG | - | chr5_4:49818808-49818827 | None:intergenic | 25.0% |
| ! | TACATGTGGTTTAAAAAACA+GGG | + | chr5_4:49818814-49818833 | Msa0855790:intron | 25.0% |
| ! | AACATGAAAAACTCAGTAAA+AGG | - | chr5_4:49818979-49818998 | None:intergenic | 25.0% |
| ! | ATAATGTTGAAAAAACGACA+AGG | + | chr5_4:49819117-49819136 | Msa0855790:CDS | 25.0% |
| ! | TATAAAATTCACTGTCAACA+AGG | + | chr5_4:49819302-49819321 | Msa0855790:intron | 25.0% |
| ! | ATAAAATTCACTGTCAACAA+GGG | + | chr5_4:49819303-49819322 | Msa0855790:intron | 25.0% |
| ! | AATCAAGTGATAAAAAGACT+TGG | + | chr5_4:49819329-49819348 | Msa0855790:intron | 25.0% |
| ! | CTTGTGTAATATTTACCAAA+TGG | - | chr5_4:49819554-49819573 | None:intergenic | 25.0% |
| ! | ATAAGGTTTAAAAATTGACG+TGG | - | chr5_4:49819884-49819903 | None:intergenic | 25.0% |
| ! | ATCATAATCTCCTTTCAAAT+TGG | + | chr5_4:49818270-49818289 | Msa0855790:CDS | 25.0% |
| ! | TCATAATCTCCTTTCAAATT+GGG | + | chr5_4:49818271-49818290 | Msa0855790:CDS | 25.0% |
| ! | TGTTTCATAAACACAATTGT+TGG | + | chr5_4:49818578-49818597 | Msa0855790:intron | 25.0% |
| ! | TGTGTTATAAAATTGTTGGT+GGG | - | chr5_4:49818727-49818746 | None:intergenic | 25.0% |
| ! | ATGTGTTATAAAATTGTTGG+TGG | - | chr5_4:49818728-49818747 | None:intergenic | 25.0% |
| ! | TAAACCACATGTAGAATTTA+GGG | - | chr5_4:49818807-49818826 | None:intergenic | 25.0% |
| ! | TTAAACCACATGTAGAATTT+AGG | - | chr5_4:49818808-49818827 | None:intergenic | 25.0% |
| ! | TACATGTGGTTTAAAAAACA+GGG | + | chr5_4:49818814-49818833 | Msa0855790:intron | 25.0% |
| ! | AACATGAAAAACTCAGTAAA+AGG | - | chr5_4:49818979-49818998 | None:intergenic | 25.0% |
| ! | ATAATGTTGAAAAAACGACA+AGG | + | chr5_4:49819117-49819136 | Msa0855790:CDS | 25.0% |
| ! | TATAAAATTCACTGTCAACA+AGG | + | chr5_4:49819302-49819321 | Msa0855790:intron | 25.0% |
| ! | ATAAAATTCACTGTCAACAA+GGG | + | chr5_4:49819303-49819322 | Msa0855790:intron | 25.0% |
| ! | AATCAAGTGATAAAAAGACT+TGG | + | chr5_4:49819329-49819348 | Msa0855790:intron | 25.0% |
| ! | CTTGTGTAATATTTACCAAA+TGG | - | chr5_4:49819554-49819573 | None:intergenic | 25.0% |
| ! | ATAAGGTTTAAAAATTGACG+TGG | - | chr5_4:49819884-49819903 | None:intergenic | 25.0% |
| CTGTAAATCAATGGATATTG+TGG | - | chr5_4:49818131-49818150 | None:intergenic | 30.0% | |
| TCTTTGCAACTGTAAATCAA+TGG | - | chr5_4:49818140-49818159 | None:intergenic | 30.0% | |
| ! | ATTACCCTTTTTGCATAAGA+AGG | - | chr5_4:49818506-49818525 | None:intergenic | 30.0% |
| ! | CCTCAATTTTTAATCGATCT+GGG | - | chr5_4:49818627-49818646 | None:intergenic | 30.0% |
| ! | TCCTCAATTTTTAATCGATC+TGG | - | chr5_4:49818628-49818647 | None:intergenic | 30.0% |
| GTGTTATAAAATTGTTGGTG+GGG | - | chr5_4:49818726-49818745 | None:intergenic | 30.0% | |
| CTACATGTGGTTTAAAAAAC+AGG | + | chr5_4:49818813-49818832 | Msa0855790:intron | 30.0% | |
| ACATAATCTACAACTCATGA+AGG | + | chr5_4:49818888-49818907 | Msa0855790:CDS | 30.0% | |
| CATAATCTACAACTCATGAA+GGG | + | chr5_4:49818889-49818908 | Msa0855790:CDS | 30.0% | |
| ATGAAAAACTCAGTAAAAGG+TGG | - | chr5_4:49818976-49818995 | None:intergenic | 30.0% | |
| ATGTTTCCTCAATACTCTAT+GGG | + | chr5_4:49818994-49819013 | Msa0855790:CDS | 30.0% | |
| CTCGTTAAATAAATGATGAG+TGG | + | chr5_4:49819353-49819372 | Msa0855790:intron | 30.0% | |
| !! | ATCTACTCTAAAATCACAGA+TGG | - | chr5_4:49819693-49819712 | None:intergenic | 30.0% |
| CTGTAAATCAATGGATATTG+TGG | - | chr5_4:49818131-49818150 | None:intergenic | 30.0% | |
| TCTTTGCAACTGTAAATCAA+TGG | - | chr5_4:49818140-49818159 | None:intergenic | 30.0% | |
| ! | ATTACCCTTTTTGCATAAGA+AGG | - | chr5_4:49818506-49818525 | None:intergenic | 30.0% |
| ! | CCTCAATTTTTAATCGATCT+GGG | - | chr5_4:49818627-49818646 | None:intergenic | 30.0% |
| ! | TCCTCAATTTTTAATCGATC+TGG | - | chr5_4:49818628-49818647 | None:intergenic | 30.0% |
| GTGTTATAAAATTGTTGGTG+GGG | - | chr5_4:49818726-49818745 | None:intergenic | 30.0% | |
| CTACATGTGGTTTAAAAAAC+AGG | + | chr5_4:49818813-49818832 | Msa0855790:intron | 30.0% | |
| ACATAATCTACAACTCATGA+AGG | + | chr5_4:49818888-49818907 | Msa0855790:CDS | 30.0% | |
| CATAATCTACAACTCATGAA+GGG | + | chr5_4:49818889-49818908 | Msa0855790:CDS | 30.0% | |
| ATGAAAAACTCAGTAAAAGG+TGG | - | chr5_4:49818976-49818995 | None:intergenic | 30.0% | |
| ATGTTTCCTCAATACTCTAT+GGG | + | chr5_4:49818994-49819013 | Msa0855790:CDS | 30.0% | |
| CTCGTTAAATAAATGATGAG+TGG | + | chr5_4:49819353-49819372 | Msa0855790:intron | 30.0% | |
| !! | ATCTACTCTAAAATCACAGA+TGG | - | chr5_4:49819693-49819712 | None:intergenic | 30.0% |
| TGGAAAAACTATAGCCTCTA+AGG | - | chr5_4:49818111-49818130 | None:intergenic | 35.0% | |
| ! | GATCTTCTTCGTCTTTTGTT+TGG | - | chr5_4:49818226-49818245 | None:intergenic | 35.0% |
| CACTGTGAATGCAAAAAATG+AGG | + | chr5_4:49818382-49818401 | Msa0855790:CDS | 35.0% | |
| TGTGAATGCAAAAAATGAGG+AGG | + | chr5_4:49818385-49818404 | Msa0855790:CDS | 35.0% | |
| CCCAGATCGATTAAAAATTG+AGG | + | chr5_4:49818624-49818643 | Msa0855790:intron | 35.0% | |
| ! | ACTTTGATGCCTTATCGTTT+TGG | + | chr5_4:49818649-49818668 | Msa0855790:intron | 35.0% |
| ! | CTTTGATGCCTTATCGTTTT+GGG | + | chr5_4:49818650-49818669 | Msa0855790:intron | 35.0% |
| TCAACCCTAAATTCTACATG+TGG | + | chr5_4:49818800-49818819 | Msa0855790:intron | 35.0% | |
| CATGTTTCCTCAATACTCTA+TGG | + | chr5_4:49818993-49819012 | Msa0855790:CDS | 35.0% | |
| AGGTTATGAAGATGGTTGTT+GGG | + | chr5_4:49819142-49819161 | Msa0855790:CDS | 35.0% | |
| GTTGTTGGGATTCAAAATCT+TGG | + | chr5_4:49819156-49819175 | Msa0855790:CDS | 35.0% | |
| GAGAAATATTCGATTGAGAG+AGG | + | chr5_4:49819397-49819416 | Msa0855790:intron | 35.0% | |
| AAAATTGTTGGAGACATGGT+AGG | - | chr5_4:49819426-49819445 | None:intergenic | 35.0% | |
| TGAGAAAATTGTTGGAGACA+TGG | - | chr5_4:49819430-49819449 | None:intergenic | 35.0% | |
| !! | ATTTGCTGTTTGCATCATGA+CGG | + | chr5_4:49819801-49819820 | Msa0855790:intron | 35.0% |
| AACAGAGAATAAGGTGAACT+AGG | + | chr5_4:49819834-49819853 | Msa0855790:intron | 35.0% | |
| ACAGAGAATAAGGTGAACTA+GGG | + | chr5_4:49819835-49819854 | Msa0855790:intron | 35.0% | |
| AGGTTTAAAAATTGACGTGG+AGG | - | chr5_4:49819881-49819900 | None:intergenic | 35.0% | |
| TGGAAAAACTATAGCCTCTA+AGG | - | chr5_4:49818111-49818130 | None:intergenic | 35.0% | |
| ! | GATCTTCTTCGTCTTTTGTT+TGG | - | chr5_4:49818226-49818245 | None:intergenic | 35.0% |
| CACTGTGAATGCAAAAAATG+AGG | + | chr5_4:49818382-49818401 | Msa0855790:CDS | 35.0% | |
| TGTGAATGCAAAAAATGAGG+AGG | + | chr5_4:49818385-49818404 | Msa0855790:CDS | 35.0% | |
| CCCAGATCGATTAAAAATTG+AGG | + | chr5_4:49818624-49818643 | Msa0855790:intron | 35.0% | |
| ! | ACTTTGATGCCTTATCGTTT+TGG | + | chr5_4:49818649-49818668 | Msa0855790:intron | 35.0% |
| ! | CTTTGATGCCTTATCGTTTT+GGG | + | chr5_4:49818650-49818669 | Msa0855790:intron | 35.0% |
| TCAACCCTAAATTCTACATG+TGG | + | chr5_4:49818800-49818819 | Msa0855790:intron | 35.0% | |
| CATGTTTCCTCAATACTCTA+TGG | + | chr5_4:49818993-49819012 | Msa0855790:CDS | 35.0% | |
| AGGTTATGAAGATGGTTGTT+GGG | + | chr5_4:49819142-49819161 | Msa0855790:CDS | 35.0% | |
| GTTGTTGGGATTCAAAATCT+TGG | + | chr5_4:49819156-49819175 | Msa0855790:CDS | 35.0% | |
| GAGAAATATTCGATTGAGAG+AGG | + | chr5_4:49819397-49819416 | Msa0855790:intron | 35.0% | |
| AAAATTGTTGGAGACATGGT+AGG | - | chr5_4:49819426-49819445 | None:intergenic | 35.0% | |
| TGAGAAAATTGTTGGAGACA+TGG | - | chr5_4:49819430-49819449 | None:intergenic | 35.0% | |
| !! | ATTTGCTGTTTGCATCATGA+CGG | + | chr5_4:49819801-49819820 | Msa0855790:intron | 35.0% |
| AACAGAGAATAAGGTGAACT+AGG | + | chr5_4:49819834-49819853 | Msa0855790:intron | 35.0% | |
| ACAGAGAATAAGGTGAACTA+GGG | + | chr5_4:49819835-49819854 | Msa0855790:intron | 35.0% | |
| AGGTTTAAAAATTGACGTGG+AGG | - | chr5_4:49819881-49819900 | None:intergenic | 35.0% | |
| ACTTGGAGTGGTTTCAACTA+AGG | - | chr5_4:49818174-49818193 | None:intergenic | 40.0% | |
| GGGAAGAATCCCAATTTGAA+AGG | - | chr5_4:49818283-49818302 | None:intergenic | 40.0% | |
| TGCCTCCTTCTTATGCAAAA+AGG | + | chr5_4:49818498-49818517 | Msa0855790:CDS | 40.0% | |
| GCCTCCTTCTTATGCAAAAA+GGG | + | chr5_4:49818499-49818518 | Msa0855790:CDS | 40.0% | |
| ! | ACCCTTTTTGCATAAGAAGG+AGG | - | chr5_4:49818503-49818522 | None:intergenic | 40.0% |
| ! | TCCTAGACTTTTAACGCATC+CGG | + | chr5_4:49818688-49818707 | Msa0855790:intron | 40.0% |
| CGGTGCAATTAACTTCTTGA+AGG | + | chr5_4:49818858-49818877 | Msa0855790:CDS | 40.0% | |
| ! | GTGACTGATTATGGTTGGTA+GGG | - | chr5_4:49819044-49819063 | None:intergenic | 40.0% |
| GGCAGATATAGAAGTGACTT+TGG | + | chr5_4:49819071-49819090 | Msa0855790:CDS | 40.0% | |
| GTTGAAAAAACGACAAGGAC+AGG | + | chr5_4:49819122-49819141 | Msa0855790:CDS | 40.0% | |
| ACAAGGACAGGTTATGAAGA+TGG | + | chr5_4:49819134-49819153 | Msa0855790:CDS | 40.0% | |
| CAGGTTATGAAGATGGTTGT+TGG | + | chr5_4:49819141-49819160 | Msa0855790:CDS | 40.0% | |
| ACACCTTAATGTTTCCAGTG+TGG | + | chr5_4:49819191-49819210 | Msa0855790:CDS | 40.0% | |
| CATCCACACTGGAAACATTA+AGG | - | chr5_4:49819197-49819216 | None:intergenic | 40.0% | |
| AAGGACATTATCATCCACAC+TGG | - | chr5_4:49819208-49819227 | None:intergenic | 40.0% | |
| ! | GGATGATAATGTCCTTGTCT+CGG | + | chr5_4:49819212-49819231 | Msa0855790:CDS | 40.0% |
| CGGTTAGTGCTAAGGTAAAT+TGG | + | chr5_4:49819232-49819251 | Msa0855790:intron | 40.0% | |
| CGCGTACTTAACAGAGAATA+AGG | + | chr5_4:49819825-49819844 | Msa0855790:intron | 40.0% | |
| TGAGCTATCACGTAGAATTC+AGG | + | chr5_4:49820061-49820080 | Msa0855790:CDS | 40.0% | |
| ACTTGGAGTGGTTTCAACTA+AGG | - | chr5_4:49818174-49818193 | None:intergenic | 40.0% | |
| GGGAAGAATCCCAATTTGAA+AGG | - | chr5_4:49818283-49818302 | None:intergenic | 40.0% | |
| TGCCTCCTTCTTATGCAAAA+AGG | + | chr5_4:49818498-49818517 | Msa0855790:CDS | 40.0% | |
| GCCTCCTTCTTATGCAAAAA+GGG | + | chr5_4:49818499-49818518 | Msa0855790:CDS | 40.0% | |
| ! | ACCCTTTTTGCATAAGAAGG+AGG | - | chr5_4:49818503-49818522 | None:intergenic | 40.0% |
| ! | TCCTAGACTTTTAACGCATC+CGG | + | chr5_4:49818688-49818707 | Msa0855790:intron | 40.0% |
| CGGTGCAATTAACTTCTTGA+AGG | + | chr5_4:49818858-49818877 | Msa0855790:CDS | 40.0% | |
| ! | GTGACTGATTATGGTTGGTA+GGG | - | chr5_4:49819044-49819063 | None:intergenic | 40.0% |
| GGCAGATATAGAAGTGACTT+TGG | + | chr5_4:49819071-49819090 | Msa0855790:CDS | 40.0% | |
| GTTGAAAAAACGACAAGGAC+AGG | + | chr5_4:49819122-49819141 | Msa0855790:CDS | 40.0% | |
| ACAAGGACAGGTTATGAAGA+TGG | + | chr5_4:49819134-49819153 | Msa0855790:CDS | 40.0% | |
| CAGGTTATGAAGATGGTTGT+TGG | + | chr5_4:49819141-49819160 | Msa0855790:CDS | 40.0% | |
| ACACCTTAATGTTTCCAGTG+TGG | + | chr5_4:49819191-49819210 | Msa0855790:CDS | 40.0% | |
| CATCCACACTGGAAACATTA+AGG | - | chr5_4:49819197-49819216 | None:intergenic | 40.0% | |
| AAGGACATTATCATCCACAC+TGG | - | chr5_4:49819208-49819227 | None:intergenic | 40.0% | |
| ! | GGATGATAATGTCCTTGTCT+CGG | + | chr5_4:49819212-49819231 | Msa0855790:CDS | 40.0% |
| CGGTTAGTGCTAAGGTAAAT+TGG | + | chr5_4:49819232-49819251 | Msa0855790:intron | 40.0% | |
| CGCGTACTTAACAGAGAATA+AGG | + | chr5_4:49819825-49819844 | Msa0855790:intron | 40.0% | |
| TGAGCTATCACGTAGAATTC+AGG | + | chr5_4:49820061-49820080 | Msa0855790:CDS | 40.0% | |
| GTTGAAACCACTCCAAGTGA+AGG | + | chr5_4:49818176-49818195 | Msa0855790:CDS | 45.0% | |
| TTGTTTGGCAACCGTAGTTG+TGG | - | chr5_4:49818211-49818230 | None:intergenic | 45.0% | |
| TGGGAAGAGTGGTAGTTTCT+GGG | - | chr5_4:49818304-49818323 | None:intergenic | 45.0% | |
| AAAAGTGGAAGTGGGAAGAG+TGG | - | chr5_4:49818315-49818334 | None:intergenic | 45.0% | |
| GTGGATGCAAAAGTGGAAGT+GGG | - | chr5_4:49818323-49818342 | None:intergenic | 45.0% | |
| !! | TGTTGTGGTGGATGCAAAAG+TGG | - | chr5_4:49818330-49818349 | None:intergenic | 45.0% |
| TCAAGGATTTGAGGACATCG+AGG | - | chr5_4:49818478-49818497 | None:intergenic | 45.0% | |
| !! | AAGGAGGCATCAAGGATTTG+AGG | - | chr5_4:49818487-49818506 | None:intergenic | 45.0% |
| !! | TGCATAAGAAGGAGGCATCA+AGG | - | chr5_4:49818495-49818514 | None:intergenic | 45.0% |
| CACTCGTACCCAAAACGATA+AGG | - | chr5_4:49818661-49818680 | None:intergenic | 45.0% | |
| !! | TATCGTTTTGGGTACGAGTG+TGG | + | chr5_4:49818661-49818680 | Msa0855790:intron | 45.0% |
| ! | CCTAGACTTTTAACGCATCC+GGG | + | chr5_4:49818689-49818708 | Msa0855790:intron | 45.0% |
| ! | AAATTGTTGGTGGGGAGTCT+GGG | - | chr5_4:49818718-49818737 | None:intergenic | 45.0% |
| ! | AAAATTGTTGGTGGGGAGTC+TGG | - | chr5_4:49818719-49818738 | None:intergenic | 45.0% |
| GGTGATCAAGCGTCAATAGT+TGG | + | chr5_4:49818835-49818854 | Msa0855790:CDS | 45.0% | |
| GATCAAGCGTCAATAGTTGG+CGG | + | chr5_4:49818838-49818857 | Msa0855790:CDS | 45.0% | |
| CGTGACTGATTATGGTTGGT+AGG | - | chr5_4:49819045-49819064 | None:intergenic | 45.0% | |
| ACCAACCATAATCAGTCACG+TGG | + | chr5_4:49819045-49819064 | Msa0855790:CDS | 45.0% | |
| GTGTCAACTACTGAACACAG+TGG | + | chr5_4:49820016-49820035 | Msa0855790:CDS | 45.0% | |
| CAACTACTGAACACAGTGGA+TGG | + | chr5_4:49820020-49820039 | Msa0855790:CDS | 45.0% | |
| GCTATCACGTAGAATTCAGG+TGG | + | chr5_4:49820064-49820083 | Msa0855790:CDS | 45.0% | |
| GTTGAAACCACTCCAAGTGA+AGG | + | chr5_4:49818176-49818195 | Msa0855790:CDS | 45.0% | |
| TTGTTTGGCAACCGTAGTTG+TGG | - | chr5_4:49818211-49818230 | None:intergenic | 45.0% | |
| TGGGAAGAGTGGTAGTTTCT+GGG | - | chr5_4:49818304-49818323 | None:intergenic | 45.0% | |
| AAAAGTGGAAGTGGGAAGAG+TGG | - | chr5_4:49818315-49818334 | None:intergenic | 45.0% | |
| GTGGATGCAAAAGTGGAAGT+GGG | - | chr5_4:49818323-49818342 | None:intergenic | 45.0% | |
| !! | TGTTGTGGTGGATGCAAAAG+TGG | - | chr5_4:49818330-49818349 | None:intergenic | 45.0% |
| TCAAGGATTTGAGGACATCG+AGG | - | chr5_4:49818478-49818497 | None:intergenic | 45.0% | |
| !! | AAGGAGGCATCAAGGATTTG+AGG | - | chr5_4:49818487-49818506 | None:intergenic | 45.0% |
| !! | TGCATAAGAAGGAGGCATCA+AGG | - | chr5_4:49818495-49818514 | None:intergenic | 45.0% |
| CACTCGTACCCAAAACGATA+AGG | - | chr5_4:49818661-49818680 | None:intergenic | 45.0% | |
| !! | TATCGTTTTGGGTACGAGTG+TGG | + | chr5_4:49818661-49818680 | Msa0855790:intron | 45.0% |
| ! | CCTAGACTTTTAACGCATCC+GGG | + | chr5_4:49818689-49818708 | Msa0855790:intron | 45.0% |
| ! | AAATTGTTGGTGGGGAGTCT+GGG | - | chr5_4:49818718-49818737 | None:intergenic | 45.0% |
| ! | AAAATTGTTGGTGGGGAGTC+TGG | - | chr5_4:49818719-49818738 | None:intergenic | 45.0% |
| GGTGATCAAGCGTCAATAGT+TGG | + | chr5_4:49818835-49818854 | Msa0855790:CDS | 45.0% | |
| GATCAAGCGTCAATAGTTGG+CGG | + | chr5_4:49818838-49818857 | Msa0855790:CDS | 45.0% | |
| CGTGACTGATTATGGTTGGT+AGG | - | chr5_4:49819045-49819064 | None:intergenic | 45.0% | |
| ACCAACCATAATCAGTCACG+TGG | + | chr5_4:49819045-49819064 | Msa0855790:CDS | 45.0% | |
| GTGTCAACTACTGAACACAG+TGG | + | chr5_4:49820016-49820035 | Msa0855790:CDS | 45.0% | |
| CAACTACTGAACACAGTGGA+TGG | + | chr5_4:49820020-49820039 | Msa0855790:CDS | 45.0% | |
| GCTATCACGTAGAATTCAGG+TGG | + | chr5_4:49820064-49820083 | Msa0855790:CDS | 45.0% | |
| CCAAGATCCTTCACTTGGAG+TGG | - | chr5_4:49818186-49818205 | None:intergenic | 50.0% | |
| CCACTCCAAGTGAAGGATCT+TGG | + | chr5_4:49818183-49818202 | Msa0855790:CDS | 50.0% | |
| TGGCTCCAAGATCCTTCACT+TGG | - | chr5_4:49818191-49818210 | None:intergenic | 50.0% | |
| GGATCTTGGAGCCACAACTA+CGG | + | chr5_4:49818197-49818216 | Msa0855790:CDS | 50.0% | |
| GGGAAGAGTGGTAGTTTCTG+GGG | - | chr5_4:49818303-49818322 | None:intergenic | 50.0% | |
| GTGGGAAGAGTGGTAGTTTC+TGG | - | chr5_4:49818305-49818324 | None:intergenic | 50.0% | |
| GGTGGATGCAAAAGTGGAAG+TGG | - | chr5_4:49818324-49818343 | None:intergenic | 50.0% | |
| CTGCAATGTGAGTCATCCTC+TGG | - | chr5_4:49818421-49818440 | None:intergenic | 50.0% | |
| CCCGGATGCGTTAAAAGTCT+AGG | - | chr5_4:49818692-49818711 | None:intergenic | 50.0% | |
| ! | AATTGTTGGTGGGGAGTCTG+GGG | - | chr5_4:49818717-49818736 | None:intergenic | 50.0% |
| !! | GGTGCACCCATAGAGTATTG+AGG | - | chr5_4:49819003-49819022 | None:intergenic | 50.0% |
| GCCACGTGACTGATTATGGT+TGG | - | chr5_4:49819049-49819068 | None:intergenic | 50.0% | |
| CCATGCCACGTGACTGATTA+TGG | - | chr5_4:49819053-49819072 | None:intergenic | 50.0% | |
| CCATAATCAGTCACGTGGCA+TGG | + | chr5_4:49819050-49819069 | Msa0855790:CDS | 50.0% | |
| CCTTAGCACTAACCGAGACA+AGG | - | chr5_4:49819227-49819246 | None:intergenic | 50.0% | |
| CCTTGTCTCGGTTAGTGCTA+AGG | + | chr5_4:49819224-49819243 | Msa0855790:CDS | 50.0% | |
| CCAAGATCCTTCACTTGGAG+TGG | - | chr5_4:49818186-49818205 | None:intergenic | 50.0% | |
| CCACTCCAAGTGAAGGATCT+TGG | + | chr5_4:49818183-49818202 | Msa0855790:CDS | 50.0% | |
| TGGCTCCAAGATCCTTCACT+TGG | - | chr5_4:49818191-49818210 | None:intergenic | 50.0% | |
| GGATCTTGGAGCCACAACTA+CGG | + | chr5_4:49818197-49818216 | Msa0855790:CDS | 50.0% | |
| GGGAAGAGTGGTAGTTTCTG+GGG | - | chr5_4:49818303-49818322 | None:intergenic | 50.0% | |
| GTGGGAAGAGTGGTAGTTTC+TGG | - | chr5_4:49818305-49818324 | None:intergenic | 50.0% | |
| GGTGGATGCAAAAGTGGAAG+TGG | - | chr5_4:49818324-49818343 | None:intergenic | 50.0% | |
| CTGCAATGTGAGTCATCCTC+TGG | - | chr5_4:49818421-49818440 | None:intergenic | 50.0% | |
| CCCGGATGCGTTAAAAGTCT+AGG | - | chr5_4:49818692-49818711 | None:intergenic | 50.0% | |
| ! | AATTGTTGGTGGGGAGTCTG+GGG | - | chr5_4:49818717-49818736 | None:intergenic | 50.0% |
| !! | GGTGCACCCATAGAGTATTG+AGG | - | chr5_4:49819003-49819022 | None:intergenic | 50.0% |
| GCCACGTGACTGATTATGGT+TGG | - | chr5_4:49819049-49819068 | None:intergenic | 50.0% | |
| CCATGCCACGTGACTGATTA+TGG | - | chr5_4:49819053-49819072 | None:intergenic | 50.0% | |
| CCATAATCAGTCACGTGGCA+TGG | + | chr5_4:49819050-49819069 | Msa0855790:CDS | 50.0% | |
| CCTTAGCACTAACCGAGACA+AGG | - | chr5_4:49819227-49819246 | None:intergenic | 50.0% | |
| CCTTGTCTCGGTTAGTGCTA+AGG | + | chr5_4:49819224-49819243 | Msa0855790:CDS | 50.0% | |
| TCGTCGTTTGCTCTGACGAG+GGG | - | chr5_4:49818360-49818379 | None:intergenic | 55.0% | |
| GTCGTCGTTTGCTCTGACGA+GGG | - | chr5_4:49818361-49818380 | None:intergenic | 55.0% | |
| AGGAGGAAATCGAGAGCCAG+AGG | + | chr5_4:49818402-49818421 | Msa0855790:CDS | 55.0% | |
| GGGTAGCACGTGATGTTCTG+AGG | - | chr5_4:49819024-49819043 | None:intergenic | 55.0% | |
| TCGTCGTTTGCTCTGACGAG+GGG | - | chr5_4:49818360-49818379 | None:intergenic | 55.0% | |
| GTCGTCGTTTGCTCTGACGA+GGG | - | chr5_4:49818361-49818380 | None:intergenic | 55.0% | |
| AGGAGGAAATCGAGAGCCAG+AGG | + | chr5_4:49818402-49818421 | Msa0855790:CDS | 55.0% | |
| GGGTAGCACGTGATGTTCTG+AGG | - | chr5_4:49819024-49819043 | None:intergenic | 55.0% | |
| AGGGGCTGTGGTTGTTGTGG+TGG | - | chr5_4:49818342-49818361 | None:intergenic | 60.0% | |
| ACGAGGGGCTGTGGTTGTTG+TGG | - | chr5_4:49818345-49818364 | None:intergenic | 60.0% | |
| TTTGCTCTGACGAGGGGCTG+TGG | - | chr5_4:49818354-49818373 | None:intergenic | 60.0% | |
| CGTCGTCGTTTGCTCTGACG+AGG | - | chr5_4:49818362-49818381 | None:intergenic | 60.0% | |
| AGGGGCTGTGGTTGTTGTGG+TGG | - | chr5_4:49818342-49818361 | None:intergenic | 60.0% | |
| ACGAGGGGCTGTGGTTGTTG+TGG | - | chr5_4:49818345-49818364 | None:intergenic | 60.0% | |
| TTTGCTCTGACGAGGGGCTG+TGG | - | chr5_4:49818354-49818373 | None:intergenic | 60.0% | |
| CGTCGTCGTTTGCTCTGACG+AGG | - | chr5_4:49818362-49818381 | None:intergenic | 60.0% | |
| GGTGGGGAGTCTGGGGAGCC+CGG | - | chr5_4:49818710-49818729 | None:intergenic | 75.0% | |
| GGTGGGGAGTCTGGGGAGCC+CGG | - | chr5_4:49818710-49818729 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 49818104 | 49820106 | 49818104 | ID=Msa0855790;Name=Msa0855790 |
| chr5_4 | mRNA | 49818104 | 49820106 | 49818104 | ID=Msa0855790-mRNA-1;Parent=Msa0855790;Name=Msa0855790-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|0|0|0.66|1|1|3|0|309 |
| chr5_4 | exon | 49818104 | 49818520 | 49818104 | ID=Msa0855790-mRNA-1:exon:15615;Parent=Msa0855790-mRNA-1 |
| chr5_4 | exon | 49818835 | 49819245 | 49818835 | ID=Msa0855790-mRNA-1:exon:15616;Parent=Msa0855790-mRNA-1 |
| chr5_4 | exon | 49820005 | 49820106 | 49820005 | ID=Msa0855790-mRNA-1:exon:15617;Parent=Msa0855790-mRNA-1 |
| chr5_4 | CDS | 49818104 | 49818520 | 49818104 | ID=Msa0855790-mRNA-1:cds;Parent=Msa0855790-mRNA-1 |
| chr5_4 | CDS | 49818835 | 49819245 | 49818835 | ID=Msa0855790-mRNA-1:cds;Parent=Msa0855790-mRNA-1 |
| chr5_4 | CDS | 49820005 | 49820106 | 49820005 | ID=Msa0855790-mRNA-1:cds;Parent=Msa0855790-mRNA-1 |
| Gene Sequence |
| Protein sequence |
