AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0775690

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0775690 MtrunA17_Chr5g0430211 95.615 707 26 2 1 705 1 704 0.0 1364
Msa0775690 MtrunA17_Chr5g0437251 49.856 694 293 15 30 704 25 682 0.0 634
Msa0775690 MtrunA17_Chr1g0187591 54.224 651 205 14 1 640 1 569 0.0 618
Msa0775690 MtrunA17_Chr3g0105131 45.917 649 194 18 1 639 1 502 6.65e-156 461
Msa0775690 MtrunA17_Chr7g0257831 42.962 682 284 21 35 661 47 678 2.03e-155 467
Msa0775690 MtrunA17_Chr3g0088521 40.192 729 332 19 33 700 43 728 5.02e-148 448
Msa0775690 MtrunA17_Chr3g0105101 46.263 495 141 12 39 530 29 401 1.85e-124 376
Msa0775690 MtrunA17_Chr3g0113651 45.662 438 168 5 33 469 8 376 6.06e-124 379
Msa0775690 MtrunA17_Chr3g0113651 32.273 220 117 10 483 696 322 515 2.09e-18 89.0
Msa0775690 MtrunA17_Chr1g0171151 39.926 541 257 15 35 537 31 541 1.22e-107 339
Msa0775690 MtrunA17_Chr3g0092171 43.631 369 163 7 32 381 80 422 3.70e-89 288
Msa0775690 MtrunA17_Chr3g0092221 40.896 335 140 10 138 451 51 348 2.07e-72 240
Msa0775690 MtrunA17_Chr3g0105121 38.391 435 177 14 229 658 8 356 6.88e-68 227
Msa0775690 MtrunA17_Chr3g0105141 65.000 140 47 2 199 336 4 143 1.09e-61 203
Msa0775690 MtrunA17_Chr8g0389561 43.498 223 115 3 162 381 21 235 9.29e-55 192
Msa0775690 MtrunA17_Chr6g0487481 57.971 138 48 2 196 332 77 205 5.00e-52 184
Msa0775690 MtrunA17_Chr3g0135351 49.419 172 73 3 202 372 32 190 1.08e-51 181
Msa0775690 MtrunA17_Chr2g0324781 61.261 111 43 0 230 340 77 187 2.28e-47 173
Msa0775690 MtrunA17_Chr4g0040391 57.009 107 46 0 226 332 56 162 3.05e-44 161
Msa0775690 MtrunA17_Chr3g0105151 34.589 292 110 13 394 669 1 227 3.42e-29 116
Msa0775690 MtrunA17_Chr3g0105111 41.379 116 41 4 594 704 17 110 1.34e-14 70.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0775690 AT5G58620.1 47.399 692 267 18 23 704 2 606 0.0 573
Msa0775690 AT2G40140.2 42.416 712 285 17 1 704 1 595 8.10e-174 510
Msa0775690 AT2G40140.1 42.416 712 285 17 1 704 1 595 8.10e-174 510
Msa0775690 AT2G41900.1 38.851 731 314 22 35 700 48 710 2.93e-142 433
Msa0775690 AT3G55980.1 50.000 474 194 13 1 462 1 443 3.36e-142 428
Msa0775690 AT3G55980.1 37.949 195 83 8 514 704 419 579 4.55e-21 98.2
Msa0775690 AT3G55980.2 50.000 474 194 13 1 462 68 510 1.27e-141 429
Msa0775690 AT3G55980.2 37.949 195 83 8 514 704 486 646 8.06e-21 97.8
Msa0775690 AT5G12850.1 37.856 737 325 23 30 700 37 706 1.35e-139 426
Msa0775690 AT4G29190.1 52.273 176 83 1 212 387 62 236 1.61e-54 191
Msa0775690 AT2G25900.2 66.964 112 37 0 226 337 86 197 3.50e-53 186
Msa0775690 AT2G25900.1 66.964 112 37 0 226 337 86 197 3.50e-53 186
Msa0775690 AT2G19810.1 63.333 120 44 0 215 334 63 182 8.17e-53 186
Msa0775690 AT5G07500.1 52.703 148 66 1 189 332 7 154 1.31e-49 174
Msa0775690 AT1G03790.1 51.634 153 66 3 197 345 53 201 2.42e-47 172
Msa0775690 AT5G44260.1 55.970 134 54 2 210 342 44 173 2.86e-45 166

Find 189 sgRNAs with CRISPR-Local

Find 440 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATTCATATTCGGACGTATT+TGG 0.179717 5_2:-52801380 None:intergenic
TCCAGTCTTCAATCTGCTTT+TGG 0.183105 5_2:-52801037 None:intergenic
TCAGACATGTCTTCTGTTTC+CGG 0.194365 5_2:+52800357 Msa0775690:CDS
GATGTATCGGCTTATATTCT+TGG 0.209122 5_2:+52800085 Msa0775690:CDS
CTCTTCATTGTGCGGTTGTT+GGG 0.225881 5_2:+52800158 Msa0775690:CDS
AAAGTTGGTTCGAACAAATT+AGG 0.237750 5_2:+52800013 Msa0775690:CDS
GGGCTCACCCGATGGAAATT+TGG 0.238746 5_2:+52801614 Msa0775690:CDS
CTAGCTGCAGCTGGAGTTAA+AGG 0.264190 5_2:-52801711 None:intergenic
GAGGATGCTACAAGCTCTTT+TGG 0.287126 5_2:+52800315 Msa0775690:CDS
CAAGGGCTTATTCTCATGAT+TGG 0.318225 5_2:+52800536 Msa0775690:CDS
ATACGACCGGGGAACTAAAT+AGG 0.321029 5_2:+52801223 Msa0775690:CDS
CTGAGGAAATCATCTTCATT+TGG 0.338854 5_2:+52801669 Msa0775690:CDS
GTGTCCCTTGTCCTGAGTTT+CGG 0.340392 5_2:+52800629 Msa0775690:CDS
GCTCTTCATTGTGCGGTTGT+TGG 0.359015 5_2:+52800157 Msa0775690:CDS
ACCTATAGGTTTGATCCATC+TGG 0.362218 5_2:+52801456 Msa0775690:CDS
TGCAGATGCTGATTCATATT+CGG 0.365840 5_2:-52801390 None:intergenic
ACGCCGCCTTTGACTTCATC+TGG 0.368423 5_2:+52800940 Msa0775690:CDS
GTCTTTCCTCTCCTTCCAAC+TGG 0.371979 5_2:+52801151 Msa0775690:CDS
TATATAGTACCGATGAGTTT+AGG 0.375544 5_2:+52800485 Msa0775690:CDS
TCCTGTGCCCTAGCTGCAGC+TGG 0.377666 5_2:-52801720 None:intergenic
CATTCCACTTCCAGTGTGAT+TGG 0.379280 5_2:+52801426 Msa0775690:CDS
CCTTGGATTGAAGATAGAAT+TGG 0.386827 5_2:-52800290 None:intergenic
CGCCCCTTGTATGCTTCTAC+CGG 0.390009 5_2:+52800805 Msa0775690:CDS
GATGGGGTTGGTTTGTGGTA+TGG 0.391400 5_2:+52799986 Msa0775690:CDS
CTTCTTTGCTCACAAGGTTG+AGG 0.394404 5_2:+52800777 Msa0775690:CDS
AGCAAAATCTTGATAATCTC+GGG 0.396619 5_2:-52800196 None:intergenic
CAGCATCTGCAACAAAACTA+TGG 0.398990 5_2:+52801402 Msa0775690:CDS
CACATGGCTGCAGCAGCAAC+GGG 0.402327 5_2:-52800973 None:intergenic
TGATTGGATCTCCGACCTAT+AGG 0.404507 5_2:+52801442 Msa0775690:CDS
ATTCAGATATTGCAATGCTT+AGG 0.408619 5_2:+52801079 Msa0775690:CDS
AAAATGTCTTCAAGGTTTGT+AGG 0.409953 5_2:-52801261 None:intergenic
TGGAATTTATGCAACATTGA+TGG 0.416189 5_2:-52801297 None:intergenic
AATCTGTTCCGTTGTTAAGA+TGG 0.416969 5_2:-52801851 None:intergenic
TTCAGATATTGCAATGCTTA+GGG 0.419562 5_2:+52801080 Msa0775690:CDS
TCGGCTTATATTCTTGGAAC+AGG 0.420142 5_2:+52800091 Msa0775690:CDS
TTGTCAAAAGGATTTGATCA+TGG 0.420181 5_2:+52799838 Msa0775690:CDS
TATATCCCATTCTTAATGTC+TGG 0.426530 5_2:-52800466 None:intergenic
CTCATGGTTGCAGCTATGTA+TGG 0.426552 5_2:+52800055 Msa0775690:CDS
GCTTGTAGCATCCTCTTCCT+TGG 0.429452 5_2:-52800307 None:intergenic
GAAAAGGCATAAGGCTTAGC+AGG 0.430069 5_2:-52801585 None:intergenic
TCAAAGTGAAGCCTTGTTCA+AGG 0.431149 5_2:+52800518 Msa0775690:CDS
AAGCAAAATCTTGATAATCT+CGG 0.433411 5_2:-52800197 None:intergenic
CTTGATGCTGCAGGAGCAGC+AGG 0.434896 5_2:+52801330 Msa0775690:CDS
GAGACCCGAAAATGTCTTCA+AGG 0.438096 5_2:-52801269 None:intergenic
CTTATATTCTTGGAACAGGT+CGG 0.443594 5_2:+52800095 Msa0775690:CDS
ATGTTGATGGGGTTGGTTTG+TGG 0.450945 5_2:+52799981 Msa0775690:CDS
GAGTGTCCCTTTGTTCATCC+AGG 0.455762 5_2:+52800562 Msa0775690:CDS
GGTTGCGATGTTGATGGGGT+TGG 0.455769 5_2:+52799974 Msa0775690:CDS
GCAGTACTGTAATATGATCT+AGG 0.457857 5_2:-52800844 None:intergenic
CACCCGATGGAAATTTGGAT+TGG 0.458700 5_2:+52801619 Msa0775690:CDS
AGCGAAACAATCAAATCAAC+TGG 0.459199 5_2:-52800265 None:intergenic
AGTTGATTTGATTGTTTCGC+TGG 0.460352 5_2:+52800267 Msa0775690:CDS
CCACATGGCTGCAGCAGCAA+CGG 0.462166 5_2:-52800974 None:intergenic
CAGCTATAATGATATTTCCT+TGG 0.464131 5_2:-52800607 None:intergenic
TGTCAAAAGGATTTGATCAT+GGG 0.468107 5_2:+52799839 Msa0775690:CDS
ACGAGGGTTGCGATGTTGAT+GGG 0.471244 5_2:+52799969 Msa0775690:CDS
AGATCCAATCACACTGGAAG+TGG 0.473300 5_2:-52801430 None:intergenic
TCTCTTCCAGACATTAAGAA+TGG 0.478120 5_2:+52800460 Msa0775690:CDS
AGAATTTCACTTGATGCTGC+AGG 0.479378 5_2:+52801321 Msa0775690:CDS
CTTTAACTCCAGCTGCAGCT+AGG 0.479692 5_2:+52801712 Msa0775690:CDS
GGAGCAATTGTACATGGATC+AGG 0.480663 5_2:+52801890 Msa0775690:CDS
CTCTTCCAGACATTAAGAAT+GGG 0.482849 5_2:+52800461 Msa0775690:CDS
TACAATTGCTCCAACCAAGC+TGG 0.485537 5_2:-52801879 None:intergenic
TACTGCTTCTACATTAGAGA+TGG 0.486960 5_2:+52800861 Msa0775690:CDS
TATGTGAATGGGAATAAAGA+AGG 0.487426 5_2:+52799869 Msa0775690:CDS
CGGAAAGGATCGTGCAGTAA+AGG 0.487429 5_2:+52800649 Msa0775690:CDS
AGCTGGAGTTAAAGGAGTAC+TGG 0.489995 5_2:-52801703 None:intergenic
TTATATTCTTGGAACAGGTC+GGG 0.491005 5_2:+52800096 Msa0775690:CDS
TCTTCATTGTGCGGTTGTTG+GGG 0.492583 5_2:+52800159 Msa0775690:CDS
TTGTGGTATGGAAGGAAAGT+TGG 0.493676 5_2:+52799998 Msa0775690:CDS
ATGGGGTGTGAGTATGTGAA+TGG 0.494445 5_2:+52799857 Msa0775690:CDS
AGATTCGATTCCAGCTTGGT+TGG 0.494600 5_2:+52801869 Msa0775690:CDS
CAGGTCGGGTTGATGTTAAT+CGG 0.495738 5_2:+52800110 Msa0775690:CDS
GTATGGAAGCTTGGATGTAT+CGG 0.499389 5_2:+52800072 Msa0775690:CDS
TCTGGAAGAGAGACATCAAC+AGG 0.501027 5_2:-52800448 None:intergenic
TTTAACTCCAGCTGCAGCTA+GGG 0.502176 5_2:+52801713 Msa0775690:CDS
TATTTAGTTCCCCGGTCGTA+TGG 0.502935 5_2:-52801221 None:intergenic
AGGAGATGGAATAGCAGAAC+CGG 0.503649 5_2:-52800824 None:intergenic
CCTATAGGTTTGATCCATCT+GGG 0.506082 5_2:+52801457 Msa0775690:CDS
ATGGAGAACCAAGTGACATT+GGG 0.506623 5_2:-52800894 None:intergenic
CTATGAACCAGATGTGTCTT+GGG 0.508226 5_2:+52801749 Msa0775690:CDS
TCCAGCTGCAGCTAGGGCAC+AGG 0.510410 5_2:+52801719 Msa0775690:CDS
ACACGGCTTTGCAAGGATGA+AGG 0.512844 5_2:+52800733 Msa0775690:CDS
TGCAGCTATGTATGGAAGCT+TGG 0.514902 5_2:+52800063 Msa0775690:CDS
TAGTTCCCCGGTCGTATGGT+TGG 0.517395 5_2:-52801217 None:intergenic
GAATTAACCCAAGACACATC+TGG 0.517792 5_2:-52801756 None:intergenic
CAAAGTGAAGCCTTGTTCAA+GGG 0.517860 5_2:+52800519 Msa0775690:CDS
ATGCAAGGCGACGCGATCCA+AGG 0.519136 5_2:+52800590 Msa0775690:CDS
CACCGCGCTCGATAAAGCTC+TGG 0.521693 5_2:-52801533 None:intergenic
GATGGAGAACCAAGTGACAT+TGG 0.523747 5_2:-52800895 None:intergenic
AACGAGGGTTGCGATGTTGA+TGG 0.524302 5_2:+52799968 Msa0775690:CDS
CGAAAACCTATTTAGTTCCC+CGG 0.524607 5_2:-52801229 None:intergenic
TCAATTAGCCCAATGTCACT+TGG 0.534086 5_2:+52800886 Msa0775690:CDS
TTGGGTTAATTCACTTGTGA+AGG 0.538508 5_2:+52801767 Msa0775690:CDS
CCCCAGTTAGAAAAGGCATA+AGG 0.538596 5_2:-52801594 None:intergenic
GTCCAATCCAAATTTCCATC+GGG 0.538779 5_2:-52801621 None:intergenic
TCTTCGACCAACCATACGAC+CGG 0.541735 5_2:+52801210 Msa0775690:CDS
GGGTGAGCCCCAGTTAGAAA+AGG 0.542739 5_2:-52801601 None:intergenic
ACTATGAACCAGATGTGTCT+TGG 0.542920 5_2:+52801748 Msa0775690:CDS
ACTGCTTCTACATTAGAGAT+GGG 0.544371 5_2:+52800862 Msa0775690:CDS
TTGGTTGGAGCAATTGTACA+TGG 0.546263 5_2:+52801884 Msa0775690:CDS
GTCAAAGGCGGCGTTGAGGA+GGG 0.547086 5_2:-52800931 None:intergenic
AGTTTGCTTCTTTGCTCACA+AGG 0.547575 5_2:+52800771 Msa0775690:CDS
CTATCTTCAATCCAAGGAAG+AGG 0.548194 5_2:+52800296 Msa0775690:CDS
CACGATCCTTTCCGAAACTC+AGG 0.550059 5_2:-52800640 None:intergenic
GCGAAAGCAGCAACTACTGA+TGG 0.552696 5_2:+52801116 Msa0775690:CDS
CCCAGATGGATCAAACCTAT+AGG 0.553523 5_2:-52801457 None:intergenic
CTTCGACCAACCATACGACC+GGG 0.555663 5_2:+52801211 Msa0775690:CDS
GAACAGATTCGATTCCAGCT+TGG 0.556097 5_2:+52801865 Msa0775690:CDS
CCAATTCTATCTTCAATCCA+AGG 0.560551 5_2:+52800290 Msa0775690:CDS
AGCCGTGTCTTATACTGCGC+AGG 0.561388 5_2:-52800718 None:intergenic
CTGTAATATGATCTAGGAGA+TGG 0.561399 5_2:-52800838 None:intergenic
AGTCAAAGGCGGCGTTGAGG+AGG 0.561805 5_2:-52800932 None:intergenic
TCAATGTCATCAATTGTCTC+CGG 0.563566 5_2:-52800376 None:intergenic
TTCATCCAGGGGAAAATGCA+AGG 0.563820 5_2:+52800575 Msa0775690:CDS
AGAACCGGTAGAAGCATACA+AGG 0.565045 5_2:-52800809 None:intergenic
CCCAAAAGCAGATTGAAGAC+TGG 0.566689 5_2:+52801036 Msa0775690:CDS
GGGTTGGTTTGTGGTATGGA+AGG 0.567780 5_2:+52799990 Msa0775690:CDS
GTTGATGTTAATCGGTCTAG+TGG 0.567818 5_2:+52800118 Msa0775690:CDS
TCTAACTGGGGCTCACCCGA+TGG 0.570083 5_2:+52801606 Msa0775690:CDS
TCAGCTGCAGATGATGTGGT+TGG 0.573637 5_2:+52799926 Msa0775690:CDS
GAGGGTGGTATCAAAACAGA+TGG 0.574942 5_2:-52800913 None:intergenic
TGAAGAGAGGACACCTCTCA+TGG 0.576333 5_2:+52800039 Msa0775690:CDS
ACAAATTAGGTTATGAAGAG+AGG 0.576520 5_2:+52800026 Msa0775690:CDS
AGTGTCCCTTTGTTCATCCA+GGG 0.576667 5_2:+52800563 Msa0775690:CDS
CAATCACACTGGAAGTGGAA+TGG 0.577876 5_2:-52801425 None:intergenic
ATGGAATGATTCCAGTTGGA+AGG 0.579291 5_2:-52801162 None:intergenic
CCTTTCCGAAACTCAGGACA+AGG 0.580350 5_2:-52800634 None:intergenic
GTATAAGACACGGCTTTGCA+AGG 0.581068 5_2:+52800726 Msa0775690:CDS
ATGATTCCAGTTGGAAGGAG+AGG 0.583775 5_2:-52801157 None:intergenic
AGTCCAATCCAAATTTCCAT+CGG 0.586204 5_2:-52801622 None:intergenic
ATGAAGAGCAGTAGCACCAT+CGG 0.586647 5_2:-52800143 None:intergenic
ATGTGAATGGGAATAAAGAA+GGG 0.588204 5_2:+52799870 Msa0775690:CDS
GACGCGGATAACTCCCCAGA+TGG 0.588308 5_2:-52801471 None:intergenic
CCTTGTCCTGAGTTTCGGAA+AGG 0.590059 5_2:+52800634 Msa0775690:CDS
AGGCATGGAATGATTCCAGT+TGG 0.590112 5_2:-52801166 None:intergenic
CCGTTGCTGCTGCAGCCATG+TGG 0.592506 5_2:+52800974 Msa0775690:CDS
ATCAACTGGTCGGTTACCGT+TGG 0.595630 5_2:-52800251 None:intergenic
ATCTGAATTAATATCTCTAG+CGG 0.595917 5_2:-52801064 None:intergenic
TGGGGTGTGAGTATGTGAAT+GGG 0.600624 5_2:+52799858 Msa0775690:CDS
ATGACATTGACGAATATCAA+AGG 0.602422 5_2:+52800389 Msa0775690:CDS
ATCTGGGGAGTTATCCGCGT+CGG 0.603525 5_2:+52801473 Msa0775690:CDS
AATTTGGATTGGACTTCACA+CGG 0.603583 5_2:+52801630 Msa0775690:CDS
CAGCATCAAGTGAAATTCTG+TGG 0.605687 5_2:-52801317 None:intergenic
TGCTACTGCTCTTCATTGTG+CGG 0.605703 5_2:+52800150 Msa0775690:CDS
AAAAGATGGACTGTTAGGCA+TGG 0.606790 5_2:-52801181 None:intergenic
GTTGGAAGGAGAGGAAAGAC+CGG 0.607081 5_2:-52801148 None:intergenic
GGACGTATTTGGATTCCAGT+CGG 0.609277 5_2:-52801369 None:intergenic
GCAACTACTGATGGATGAGA+TGG 0.611701 5_2:+52801125 Msa0775690:CDS
CTACTGATGGATGAGATGGC+CGG 0.611784 5_2:+52801129 Msa0775690:CDS
GAGAATGAAGCTCAGAATGA+CGG 0.613447 5_2:-52801563 None:intergenic
AGCCAGAGCTTTATCGAGCG+CGG 0.613507 5_2:+52801531 Msa0775690:CDS
TGGATGAACAAAGGGACACT+CGG 0.617153 5_2:-52800560 None:intergenic
AATCGGTCTAGTGGATCCGA+TGG 0.617627 5_2:+52800127 Msa0775690:CDS
TGTATACATCCTAAACTCAT+CGG 0.621538 5_2:-52800494 None:intergenic
TACATAGCTGCAACCATGAG+AGG 0.624576 5_2:-52800052 None:intergenic
GCAAAATCTTGATAATCTCG+GGG 0.625212 5_2:-52800195 None:intergenic
TGAGAATAAGCCCTTGAACA+AGG 0.627841 5_2:-52800529 None:intergenic
TCTCAGTTACAATCTCCGAC+TGG 0.629713 5_2:+52801354 Msa0775690:CDS
GTCAAAAGGATTTGATCATG+GGG 0.630254 5_2:+52799840 Msa0775690:CDS
GTGTCCCTTTGTTCATCCAG+GGG 0.633464 5_2:+52800564 Msa0775690:CDS
CGAGGGTTGCGATGTTGATG+GGG 0.634282 5_2:+52799970 Msa0775690:CDS
CTTCATTGTGCGGTTGTTGG+GGG 0.635961 5_2:+52800160 Msa0775690:CDS
GATGCTCCAGATGAAGTCAA+AGG 0.639371 5_2:-52800946 None:intergenic
GATGGATCAAACCTATAGGT+CGG 0.639738 5_2:-52801453 None:intergenic
AAACAATCAAATCAACTGGT+CGG 0.641933 5_2:-52800261 None:intergenic
GGTCGGAGATCCAATCACAC+TGG 0.644987 5_2:-52801436 None:intergenic
CTAAACTGATGAGATTCTTG+CGG 0.645883 5_2:-52801798 None:intergenic
AAAGGCGGCGTTGAGGAGGG+TGG 0.647882 5_2:-52800928 None:intergenic
GCTAGTGCTGTTGATGCCAA+CGG 0.653244 5_2:+52800235 Msa0775690:CDS
ATTAGACGGTGTCTGCCACA+TGG 0.653248 5_2:-52800989 None:intergenic
TGGAGTTAAAGGAGTACTGG+TGG 0.655843 5_2:-52801700 None:intergenic
TGAAGTCAAAGGCGGCGTTG+AGG 0.657176 5_2:-52800935 None:intergenic
GAGAAGAACTGAATAAGCTG+AGG 0.666361 5_2:+52801652 Msa0775690:CDS
TTCGACCAACCATACGACCG+GGG 0.672912 5_2:+52801212 Msa0775690:CDS
TGCTTAGGGTTGAAACTCAG+CGG 0.673294 5_2:+52801094 Msa0775690:CDS
AACCGGTAGAAGCATACAAG+GGG 0.673738 5_2:-52800807 None:intergenic
GAACCGGTAGAAGCATACAA+GGG 0.683674 5_2:-52800808 None:intergenic
CTATAGGTTTGATCCATCTG+GGG 0.685733 5_2:+52801458 Msa0775690:CDS
CTGCAGCGCCATCTTAACAA+CGG 0.687526 5_2:+52801843 Msa0775690:CDS
ATCCTGCGCAGTATAAGACA+CGG 0.689588 5_2:+52800716 Msa0775690:CDS
TTAGCGTTGAAGATCAGACA+AGG 0.695815 5_2:+52801817 Msa0775690:CDS
CAAAATCTTGATAATCTCGG+GGG 0.705772 5_2:-52800194 None:intergenic
TCTTGCATTCAAAGCCGACG+CGG 0.707580 5_2:-52801487 None:intergenic
TAAAGAAGGGCAGTATCACG+AGG 0.714482 5_2:+52799883 Msa0775690:CDS
GATTCTTGTGACTATGCACA+CGG 0.716065 5_2:+52800673 Msa0775690:CDS
CTTTCCGAAACTCAGGACAA+GGG 0.724035 5_2:-52800633 None:intergenic
GTAGGGATCGAAACATTAGA+CGG 0.728881 5_2:-52801003 None:intergenic
GCTCCAGATGAAGTCAAAGG+CGG 0.734283 5_2:-52800943 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAGAAAAAAACTTGTCAAA+AGG + chr5_2:52799826-52799845 Msa0775690:CDS 20.0%
!! TAAGAAAAAAACTTGTCAAA+AGG + chr5_2:52799826-52799845 Msa0775690:CDS 20.0%
!! AAGCAAAATCTTGATAATCT+CGG - chr5_2:52800200-52800219 None:intergenic 25.0%
! ATCTGAATTAATATCTCTAG+CGG - chr5_2:52801067-52801086 None:intergenic 25.0%
!! AAGCAAAATCTTGATAATCT+CGG - chr5_2:52800200-52800219 None:intergenic 25.0%
! ATCTGAATTAATATCTCTAG+CGG - chr5_2:52801067-52801086 None:intergenic 25.0%
TTGTCAAAAGGATTTGATCA+TGG + chr5_2:52799838-52799857 Msa0775690:CDS 30.0%
TGTCAAAAGGATTTGATCAT+GGG + chr5_2:52799839-52799858 Msa0775690:CDS 30.0%
TATGTGAATGGGAATAAAGA+AGG + chr5_2:52799869-52799888 Msa0775690:CDS 30.0%
ATGTGAATGGGAATAAAGAA+GGG + chr5_2:52799870-52799889 Msa0775690:CDS 30.0%
AAAAAATGCGATTGAAAACG+AGG + chr5_2:52799952-52799971 Msa0775690:CDS 30.0%
AAAAATGCGATTGAAAACGA+GGG + chr5_2:52799953-52799972 Msa0775690:CDS 30.0%
!! AAAGTTGGTTCGAACAAATT+AGG + chr5_2:52800013-52800032 Msa0775690:CDS 30.0%
ACAAATTAGGTTATGAAGAG+AGG + chr5_2:52800026-52800045 Msa0775690:CDS 30.0%
! AGCAAAATCTTGATAATCTC+GGG - chr5_2:52800199-52800218 None:intergenic 30.0%
AAACAATCAAATCAACTGGT+CGG - chr5_2:52800264-52800283 None:intergenic 30.0%
ATGACATTGACGAATATCAA+AGG + chr5_2:52800389-52800408 Msa0775690:CDS 30.0%
TATATCCCATTCTTAATGTC+TGG - chr5_2:52800469-52800488 None:intergenic 30.0%
!! TATATAGTACCGATGAGTTT+AGG + chr5_2:52800485-52800504 Msa0775690:CDS 30.0%
TGTATACATCCTAAACTCAT+CGG - chr5_2:52800497-52800516 None:intergenic 30.0%
CAGCTATAATGATATTTCCT+TGG - chr5_2:52800610-52800629 None:intergenic 30.0%
ATTCAGATATTGCAATGCTT+AGG + chr5_2:52801079-52801098 Msa0775690:CDS 30.0%
TTCAGATATTGCAATGCTTA+GGG + chr5_2:52801080-52801099 Msa0775690:CDS 30.0%
AAAATGTCTTCAAGGTTTGT+AGG - chr5_2:52801264-52801283 None:intergenic 30.0%
! ACAAACCTTGAAGACATTTT+CGG + chr5_2:52801264-52801283 Msa0775690:CDS 30.0%
TGGAATTTATGCAACATTGA+TGG - chr5_2:52801300-52801319 None:intergenic 30.0%
TTGTCAAAAGGATTTGATCA+TGG + chr5_2:52799838-52799857 Msa0775690:CDS 30.0%
TGTCAAAAGGATTTGATCAT+GGG + chr5_2:52799839-52799858 Msa0775690:CDS 30.0%
TATGTGAATGGGAATAAAGA+AGG + chr5_2:52799869-52799888 Msa0775690:CDS 30.0%
ATGTGAATGGGAATAAAGAA+GGG + chr5_2:52799870-52799889 Msa0775690:CDS 30.0%
AAAAAATGCGATTGAAAACG+AGG + chr5_2:52799952-52799971 Msa0775690:CDS 30.0%
AAAAATGCGATTGAAAACGA+GGG + chr5_2:52799953-52799972 Msa0775690:CDS 30.0%
!! AAAGTTGGTTCGAACAAATT+AGG + chr5_2:52800013-52800032 Msa0775690:CDS 30.0%
ACAAATTAGGTTATGAAGAG+AGG + chr5_2:52800026-52800045 Msa0775690:CDS 30.0%
! AGCAAAATCTTGATAATCTC+GGG - chr5_2:52800199-52800218 None:intergenic 30.0%
AAACAATCAAATCAACTGGT+CGG - chr5_2:52800264-52800283 None:intergenic 30.0%
ATGACATTGACGAATATCAA+AGG + chr5_2:52800389-52800408 Msa0775690:CDS 30.0%
TATATCCCATTCTTAATGTC+TGG - chr5_2:52800469-52800488 None:intergenic 30.0%
!! TATATAGTACCGATGAGTTT+AGG + chr5_2:52800485-52800504 Msa0775690:CDS 30.0%
TGTATACATCCTAAACTCAT+CGG - chr5_2:52800497-52800516 None:intergenic 30.0%
CAGCTATAATGATATTTCCT+TGG - chr5_2:52800610-52800629 None:intergenic 30.0%
ATTCAGATATTGCAATGCTT+AGG + chr5_2:52801079-52801098 Msa0775690:CDS 30.0%
TTCAGATATTGCAATGCTTA+GGG + chr5_2:52801080-52801099 Msa0775690:CDS 30.0%
AAAATGTCTTCAAGGTTTGT+AGG - chr5_2:52801264-52801283 None:intergenic 30.0%
! ACAAACCTTGAAGACATTTT+CGG + chr5_2:52801264-52801283 Msa0775690:CDS 30.0%
TGGAATTTATGCAACATTGA+TGG - chr5_2:52801300-52801319 None:intergenic 30.0%
GTCAAAAGGATTTGATCATG+GGG + chr5_2:52799840-52799859 Msa0775690:CDS 35.0%
!! GATGTATCGGCTTATATTCT+TGG + chr5_2:52800085-52800104 Msa0775690:CDS 35.0%
CTTATATTCTTGGAACAGGT+CGG + chr5_2:52800095-52800114 Msa0775690:CDS 35.0%
TTATATTCTTGGAACAGGTC+GGG + chr5_2:52800096-52800115 Msa0775690:CDS 35.0%
! CAAAATCTTGATAATCTCGG+GGG - chr5_2:52800197-52800216 None:intergenic 35.0%
! GCAAAATCTTGATAATCTCG+GGG - chr5_2:52800198-52800217 None:intergenic 35.0%
! CAAGATTTTGCTTGATGCAT+CGG + chr5_2:52800207-52800226 Msa0775690:CDS 35.0%
AGCGAAACAATCAAATCAAC+TGG - chr5_2:52800268-52800287 None:intergenic 35.0%
!! AGTTGATTTGATTGTTTCGC+TGG + chr5_2:52800267-52800286 Msa0775690:CDS 35.0%
CCTTGGATTGAAGATAGAAT+TGG - chr5_2:52800293-52800312 None:intergenic 35.0%
CCAATTCTATCTTCAATCCA+AGG + chr5_2:52800290-52800309 Msa0775690:CDS 35.0%
TCAATGTCATCAATTGTCTC+CGG - chr5_2:52800379-52800398 None:intergenic 35.0%
!!! GGATAATCTTTTGAAACACG+AGG - chr5_2:52800430-52800449 None:intergenic 35.0%
TCTCTTCCAGACATTAAGAA+TGG + chr5_2:52800460-52800479 Msa0775690:CDS 35.0%
CTCTTCCAGACATTAAGAAT+GGG + chr5_2:52800461-52800480 Msa0775690:CDS 35.0%
CTGTAATATGATCTAGGAGA+TGG - chr5_2:52800841-52800860 None:intergenic 35.0%
GCAGTACTGTAATATGATCT+AGG - chr5_2:52800847-52800866 None:intergenic 35.0%
TACTGCTTCTACATTAGAGA+TGG + chr5_2:52800861-52800880 Msa0775690:CDS 35.0%
ACTGCTTCTACATTAGAGAT+GGG + chr5_2:52800862-52800881 Msa0775690:CDS 35.0%
! CAAACCTTGAAGACATTTTC+GGG + chr5_2:52801265-52801284 Msa0775690:CDS 35.0%
GATTCATATTCGGACGTATT+TGG - chr5_2:52801383-52801402 None:intergenic 35.0%
!! TGCAGATGCTGATTCATATT+CGG - chr5_2:52801393-52801412 None:intergenic 35.0%
AGTCCAATCCAAATTTCCAT+CGG - chr5_2:52801625-52801644 None:intergenic 35.0%
! AATTTGGATTGGACTTCACA+CGG + chr5_2:52801630-52801649 Msa0775690:CDS 35.0%
CTGAGGAAATCATCTTCATT+TGG + chr5_2:52801669-52801688 Msa0775690:CDS 35.0%
TTGGGTTAATTCACTTGTGA+AGG + chr5_2:52801767-52801786 Msa0775690:CDS 35.0%
CTAAACTGATGAGATTCTTG+CGG - chr5_2:52801801-52801820 None:intergenic 35.0%
AATCTGTTCCGTTGTTAAGA+TGG - chr5_2:52801854-52801873 None:intergenic 35.0%
GTCAAAAGGATTTGATCATG+GGG + chr5_2:52799840-52799859 Msa0775690:CDS 35.0%
!! GATGTATCGGCTTATATTCT+TGG + chr5_2:52800085-52800104 Msa0775690:CDS 35.0%
CTTATATTCTTGGAACAGGT+CGG + chr5_2:52800095-52800114 Msa0775690:CDS 35.0%
TTATATTCTTGGAACAGGTC+GGG + chr5_2:52800096-52800115 Msa0775690:CDS 35.0%
! CAAAATCTTGATAATCTCGG+GGG - chr5_2:52800197-52800216 None:intergenic 35.0%
! GCAAAATCTTGATAATCTCG+GGG - chr5_2:52800198-52800217 None:intergenic 35.0%
! CAAGATTTTGCTTGATGCAT+CGG + chr5_2:52800207-52800226 Msa0775690:CDS 35.0%
AGCGAAACAATCAAATCAAC+TGG - chr5_2:52800268-52800287 None:intergenic 35.0%
!! AGTTGATTTGATTGTTTCGC+TGG + chr5_2:52800267-52800286 Msa0775690:CDS 35.0%
CCTTGGATTGAAGATAGAAT+TGG - chr5_2:52800293-52800312 None:intergenic 35.0%
CCAATTCTATCTTCAATCCA+AGG + chr5_2:52800290-52800309 Msa0775690:CDS 35.0%
TCAATGTCATCAATTGTCTC+CGG - chr5_2:52800379-52800398 None:intergenic 35.0%
!!! GGATAATCTTTTGAAACACG+AGG - chr5_2:52800430-52800449 None:intergenic 35.0%
TCTCTTCCAGACATTAAGAA+TGG + chr5_2:52800460-52800479 Msa0775690:CDS 35.0%
CTCTTCCAGACATTAAGAAT+GGG + chr5_2:52800461-52800480 Msa0775690:CDS 35.0%
CTGTAATATGATCTAGGAGA+TGG - chr5_2:52800841-52800860 None:intergenic 35.0%
GCAGTACTGTAATATGATCT+AGG - chr5_2:52800847-52800866 None:intergenic 35.0%
TACTGCTTCTACATTAGAGA+TGG + chr5_2:52800861-52800880 Msa0775690:CDS 35.0%
ACTGCTTCTACATTAGAGAT+GGG + chr5_2:52800862-52800881 Msa0775690:CDS 35.0%
! CAAACCTTGAAGACATTTTC+GGG + chr5_2:52801265-52801284 Msa0775690:CDS 35.0%
GATTCATATTCGGACGTATT+TGG - chr5_2:52801383-52801402 None:intergenic 35.0%
!! TGCAGATGCTGATTCATATT+CGG - chr5_2:52801393-52801412 None:intergenic 35.0%
AGTCCAATCCAAATTTCCAT+CGG - chr5_2:52801625-52801644 None:intergenic 35.0%
! AATTTGGATTGGACTTCACA+CGG + chr5_2:52801630-52801649 Msa0775690:CDS 35.0%
CTGAGGAAATCATCTTCATT+TGG + chr5_2:52801669-52801688 Msa0775690:CDS 35.0%
TTGGGTTAATTCACTTGTGA+AGG + chr5_2:52801767-52801786 Msa0775690:CDS 35.0%
CTAAACTGATGAGATTCTTG+CGG - chr5_2:52801801-52801820 None:intergenic 35.0%
AATCTGTTCCGTTGTTAAGA+TGG - chr5_2:52801854-52801873 None:intergenic 35.0%
! ATTTTCAGCTGCAGATGATG+TGG + chr5_2:52799922-52799941 Msa0775690:CDS 40.0%
TTGTGGTATGGAAGGAAAGT+TGG + chr5_2:52799998-52800017 Msa0775690:CDS 40.0%
GTATGGAAGCTTGGATGTAT+CGG + chr5_2:52800072-52800091 Msa0775690:CDS 40.0%
TCGGCTTATATTCTTGGAAC+AGG + chr5_2:52800091-52800110 Msa0775690:CDS 40.0%
GTTGATGTTAATCGGTCTAG+TGG + chr5_2:52800118-52800137 Msa0775690:CDS 40.0%
CTATCTTCAATCCAAGGAAG+AGG + chr5_2:52800296-52800315 Msa0775690:CDS 40.0%
! ATGCTACAAGCTCTTTTGGA+TGG + chr5_2:52800319-52800338 Msa0775690:CDS 40.0%
TCAGACATGTCTTCTGTTTC+CGG + chr5_2:52800357-52800376 Msa0775690:CDS 40.0%
!! TCAAAGTGAAGCCTTGTTCA+AGG + chr5_2:52800518-52800537 Msa0775690:CDS 40.0%
!! CAAAGTGAAGCCTTGTTCAA+GGG + chr5_2:52800519-52800538 Msa0775690:CDS 40.0%
TGAGAATAAGCCCTTGAACA+AGG - chr5_2:52800532-52800551 None:intergenic 40.0%
CAAGGGCTTATTCTCATGAT+TGG + chr5_2:52800536-52800555 Msa0775690:CDS 40.0%
! TTTTCCCCTGGATGAACAAA+GGG - chr5_2:52800571-52800590 None:intergenic 40.0%
! ATTTTCCCCTGGATGAACAA+AGG - chr5_2:52800572-52800591 None:intergenic 40.0%
GATTCTTGTGACTATGCACA+CGG + chr5_2:52800673-52800692 Msa0775690:CDS 40.0%
! AGTTTGCTTCTTTGCTCACA+AGG + chr5_2:52800771-52800790 Msa0775690:CDS 40.0%
TCAATTAGCCCAATGTCACT+TGG + chr5_2:52800886-52800905 Msa0775690:CDS 40.0%
ATGGAGAACCAAGTGACATT+GGG - chr5_2:52800897-52800916 None:intergenic 40.0%
GTAGGGATCGAAACATTAGA+CGG - chr5_2:52801006-52801025 None:intergenic 40.0%
!! CCAGTCTTCAATCTGCTTTT+GGG - chr5_2:52801039-52801058 None:intergenic 40.0%
! TCCAGTCTTCAATCTGCTTT+TGG - chr5_2:52801040-52801059 None:intergenic 40.0%
ATGGAATGATTCCAGTTGGA+AGG - chr5_2:52801165-52801184 None:intergenic 40.0%
!! AAAAGATGGACTGTTAGGCA+TGG - chr5_2:52801184-52801203 None:intergenic 40.0%
! GCCTAACAGTCCATCTTTTT+CGG + chr5_2:52801185-52801204 Msa0775690:CDS 40.0%
!! ACCGAAAAAGATGGACTGTT+AGG - chr5_2:52801189-52801208 None:intergenic 40.0%
GTCGAAGAAACCGAAAAAGA+TGG - chr5_2:52801198-52801217 None:intergenic 40.0%
! CGAAAACCTATTTAGTTCCC+CGG - chr5_2:52801232-52801251 None:intergenic 40.0%
! CGGGGAACTAAATAGGTTTT+CGG + chr5_2:52801230-52801249 Msa0775690:CDS 40.0%
! GGGGAACTAAATAGGTTTTC+GGG + chr5_2:52801231-52801250 Msa0775690:CDS 40.0%
! GGGAACTAAATAGGTTTTCG+GGG + chr5_2:52801232-52801251 Msa0775690:CDS 40.0%
! GGAACTAAATAGGTTTTCGG+GGG + chr5_2:52801233-52801252 Msa0775690:CDS 40.0%
CAGCATCAAGTGAAATTCTG+TGG - chr5_2:52801320-52801339 None:intergenic 40.0%
AGAATTTCACTTGATGCTGC+AGG + chr5_2:52801321-52801340 Msa0775690:CDS 40.0%
CAGCATCTGCAACAAAACTA+TGG + chr5_2:52801402-52801421 Msa0775690:CDS 40.0%
GATGGATCAAACCTATAGGT+CGG - chr5_2:52801456-52801475 None:intergenic 40.0%
ACCTATAGGTTTGATCCATC+TGG + chr5_2:52801456-52801475 Msa0775690:CDS 40.0%
CCTATAGGTTTGATCCATCT+GGG + chr5_2:52801457-52801476 Msa0775690:CDS 40.0%
CTATAGGTTTGATCCATCTG+GGG + chr5_2:52801458-52801477 Msa0775690:CDS 40.0%
GAGAATGAAGCTCAGAATGA+CGG - chr5_2:52801566-52801585 None:intergenic 40.0%
!! AGCCTTATGCCTTTTCTAAC+TGG + chr5_2:52801592-52801611 Msa0775690:CDS 40.0%
! GCCTTATGCCTTTTCTAACT+GGG + chr5_2:52801593-52801612 Msa0775690:CDS 40.0%
! CCTTATGCCTTTTCTAACTG+GGG + chr5_2:52801594-52801613 Msa0775690:CDS 40.0%
GTCCAATCCAAATTTCCATC+GGG - chr5_2:52801624-52801643 None:intergenic 40.0%
GAGAAGAACTGAATAAGCTG+AGG + chr5_2:52801652-52801671 Msa0775690:CDS 40.0%
ACTATGAACCAGATGTGTCT+TGG + chr5_2:52801748-52801767 Msa0775690:CDS 40.0%
CTATGAACCAGATGTGTCTT+GGG + chr5_2:52801749-52801768 Msa0775690:CDS 40.0%
GAATTAACCCAAGACACATC+TGG - chr5_2:52801759-52801778 None:intergenic 40.0%
! TTAGCGTTGAAGATCAGACA+AGG + chr5_2:52801817-52801836 Msa0775690:CDS 40.0%
TTGGTTGGAGCAATTGTACA+TGG + chr5_2:52801884-52801903 Msa0775690:CDS 40.0%
! ATTTTCAGCTGCAGATGATG+TGG + chr5_2:52799922-52799941 Msa0775690:CDS 40.0%
TTGTGGTATGGAAGGAAAGT+TGG + chr5_2:52799998-52800017 Msa0775690:CDS 40.0%
GTATGGAAGCTTGGATGTAT+CGG + chr5_2:52800072-52800091 Msa0775690:CDS 40.0%
TCGGCTTATATTCTTGGAAC+AGG + chr5_2:52800091-52800110 Msa0775690:CDS 40.0%
GTTGATGTTAATCGGTCTAG+TGG + chr5_2:52800118-52800137 Msa0775690:CDS 40.0%
CTATCTTCAATCCAAGGAAG+AGG + chr5_2:52800296-52800315 Msa0775690:CDS 40.0%
! ATGCTACAAGCTCTTTTGGA+TGG + chr5_2:52800319-52800338 Msa0775690:CDS 40.0%
TCAGACATGTCTTCTGTTTC+CGG + chr5_2:52800357-52800376 Msa0775690:CDS 40.0%
!! TCAAAGTGAAGCCTTGTTCA+AGG + chr5_2:52800518-52800537 Msa0775690:CDS 40.0%
!! CAAAGTGAAGCCTTGTTCAA+GGG + chr5_2:52800519-52800538 Msa0775690:CDS 40.0%
TGAGAATAAGCCCTTGAACA+AGG - chr5_2:52800532-52800551 None:intergenic 40.0%
CAAGGGCTTATTCTCATGAT+TGG + chr5_2:52800536-52800555 Msa0775690:CDS 40.0%
! TTTTCCCCTGGATGAACAAA+GGG - chr5_2:52800571-52800590 None:intergenic 40.0%
! ATTTTCCCCTGGATGAACAA+AGG - chr5_2:52800572-52800591 None:intergenic 40.0%
GATTCTTGTGACTATGCACA+CGG + chr5_2:52800673-52800692 Msa0775690:CDS 40.0%
! AGTTTGCTTCTTTGCTCACA+AGG + chr5_2:52800771-52800790 Msa0775690:CDS 40.0%
TCAATTAGCCCAATGTCACT+TGG + chr5_2:52800886-52800905 Msa0775690:CDS 40.0%
ATGGAGAACCAAGTGACATT+GGG - chr5_2:52800897-52800916 None:intergenic 40.0%
GTAGGGATCGAAACATTAGA+CGG - chr5_2:52801006-52801025 None:intergenic 40.0%
!! CCAGTCTTCAATCTGCTTTT+GGG - chr5_2:52801039-52801058 None:intergenic 40.0%
! TCCAGTCTTCAATCTGCTTT+TGG - chr5_2:52801040-52801059 None:intergenic 40.0%
ATGGAATGATTCCAGTTGGA+AGG - chr5_2:52801165-52801184 None:intergenic 40.0%
!! AAAAGATGGACTGTTAGGCA+TGG - chr5_2:52801184-52801203 None:intergenic 40.0%
! GCCTAACAGTCCATCTTTTT+CGG + chr5_2:52801185-52801204 Msa0775690:CDS 40.0%
!! ACCGAAAAAGATGGACTGTT+AGG - chr5_2:52801189-52801208 None:intergenic 40.0%
GTCGAAGAAACCGAAAAAGA+TGG - chr5_2:52801198-52801217 None:intergenic 40.0%
! CGAAAACCTATTTAGTTCCC+CGG - chr5_2:52801232-52801251 None:intergenic 40.0%
! CGGGGAACTAAATAGGTTTT+CGG + chr5_2:52801230-52801249 Msa0775690:CDS 40.0%
! GGGGAACTAAATAGGTTTTC+GGG + chr5_2:52801231-52801250 Msa0775690:CDS 40.0%
! GGGAACTAAATAGGTTTTCG+GGG + chr5_2:52801232-52801251 Msa0775690:CDS 40.0%
! GGAACTAAATAGGTTTTCGG+GGG + chr5_2:52801233-52801252 Msa0775690:CDS 40.0%
CAGCATCAAGTGAAATTCTG+TGG - chr5_2:52801320-52801339 None:intergenic 40.0%
AGAATTTCACTTGATGCTGC+AGG + chr5_2:52801321-52801340 Msa0775690:CDS 40.0%
CAGCATCTGCAACAAAACTA+TGG + chr5_2:52801402-52801421 Msa0775690:CDS 40.0%
GATGGATCAAACCTATAGGT+CGG - chr5_2:52801456-52801475 None:intergenic 40.0%
ACCTATAGGTTTGATCCATC+TGG + chr5_2:52801456-52801475 Msa0775690:CDS 40.0%
CCTATAGGTTTGATCCATCT+GGG + chr5_2:52801457-52801476 Msa0775690:CDS 40.0%
CTATAGGTTTGATCCATCTG+GGG + chr5_2:52801458-52801477 Msa0775690:CDS 40.0%
GAGAATGAAGCTCAGAATGA+CGG - chr5_2:52801566-52801585 None:intergenic 40.0%
!! AGCCTTATGCCTTTTCTAAC+TGG + chr5_2:52801592-52801611 Msa0775690:CDS 40.0%
! GCCTTATGCCTTTTCTAACT+GGG + chr5_2:52801593-52801612 Msa0775690:CDS 40.0%
! CCTTATGCCTTTTCTAACTG+GGG + chr5_2:52801594-52801613 Msa0775690:CDS 40.0%
GTCCAATCCAAATTTCCATC+GGG - chr5_2:52801624-52801643 None:intergenic 40.0%
GAGAAGAACTGAATAAGCTG+AGG + chr5_2:52801652-52801671 Msa0775690:CDS 40.0%
ACTATGAACCAGATGTGTCT+TGG + chr5_2:52801748-52801767 Msa0775690:CDS 40.0%
CTATGAACCAGATGTGTCTT+GGG + chr5_2:52801749-52801768 Msa0775690:CDS 40.0%
GAATTAACCCAAGACACATC+TGG - chr5_2:52801759-52801778 None:intergenic 40.0%
! TTAGCGTTGAAGATCAGACA+AGG + chr5_2:52801817-52801836 Msa0775690:CDS 40.0%
TTGGTTGGAGCAATTGTACA+TGG + chr5_2:52801884-52801903 Msa0775690:CDS 40.0%
ATGGGGTGTGAGTATGTGAA+TGG + chr5_2:52799857-52799876 Msa0775690:CDS 45.0%
TGGGGTGTGAGTATGTGAAT+GGG + chr5_2:52799858-52799877 Msa0775690:CDS 45.0%
TAAAGAAGGGCAGTATCACG+AGG + chr5_2:52799883-52799902 Msa0775690:CDS 45.0%
!! ATGTTGATGGGGTTGGTTTG+TGG + chr5_2:52799981-52800000 Msa0775690:CDS 45.0%
TACATAGCTGCAACCATGAG+AGG - chr5_2:52800055-52800074 None:intergenic 45.0%
CTCATGGTTGCAGCTATGTA+TGG + chr5_2:52800055-52800074 Msa0775690:CDS 45.0%
TGCAGCTATGTATGGAAGCT+TGG + chr5_2:52800063-52800082 Msa0775690:CDS 45.0%
!! CAGGTCGGGTTGATGTTAAT+CGG + chr5_2:52800110-52800129 Msa0775690:CDS 45.0%
ATGAAGAGCAGTAGCACCAT+CGG - chr5_2:52800146-52800165 None:intergenic 45.0%
TGCTACTGCTCTTCATTGTG+CGG + chr5_2:52800150-52800169 Msa0775690:CDS 45.0%
CTCTTCATTGTGCGGTTGTT+GGG + chr5_2:52800158-52800177 Msa0775690:CDS 45.0%
TCTTCATTGTGCGGTTGTTG+GGG + chr5_2:52800159-52800178 Msa0775690:CDS 45.0%
! GATTTTGCTTGATGCATCGG+CGG + chr5_2:52800210-52800229 Msa0775690:CDS 45.0%
! GAGGATGCTACAAGCTCTTT+TGG + chr5_2:52800315-52800334 Msa0775690:CDS 45.0%
! GCTCTTTTGGATGGTACAGA+CGG + chr5_2:52800328-52800347 Msa0775690:CDS 45.0%
TCTGGAAGAGAGACATCAAC+AGG - chr5_2:52800451-52800470 None:intergenic 45.0%
TGGATGAACAAAGGGACACT+CGG - chr5_2:52800563-52800582 None:intergenic 45.0%
AGTGTCCCTTTGTTCATCCA+GGG + chr5_2:52800563-52800582 Msa0775690:CDS 45.0%
TTCATCCAGGGGAAAATGCA+AGG + chr5_2:52800575-52800594 Msa0775690:CDS 45.0%
CTTTCCGAAACTCAGGACAA+GGG - chr5_2:52800636-52800655 None:intergenic 45.0%
!!! CACACGGTATTTTTGAGTGC+TGG + chr5_2:52800689-52800708 Msa0775690:CDS 45.0%
ATCCTGCGCAGTATAAGACA+CGG + chr5_2:52800716-52800735 Msa0775690:CDS 45.0%
GTATAAGACACGGCTTTGCA+AGG + chr5_2:52800726-52800745 Msa0775690:CDS 45.0%
CTTCTTTGCTCACAAGGTTG+AGG + chr5_2:52800777-52800796 Msa0775690:CDS 45.0%
! AACCGGTAGAAGCATACAAG+GGG - chr5_2:52800810-52800829 None:intergenic 45.0%
! GAACCGGTAGAAGCATACAA+GGG - chr5_2:52800811-52800830 None:intergenic 45.0%
! AGAACCGGTAGAAGCATACA+AGG - chr5_2:52800812-52800831 None:intergenic 45.0%
AGGAGATGGAATAGCAGAAC+CGG - chr5_2:52800827-52800846 None:intergenic 45.0%
GATGGAGAACCAAGTGACAT+TGG - chr5_2:52800898-52800917 None:intergenic 45.0%
GAGGGTGGTATCAAAACAGA+TGG - chr5_2:52800916-52800935 None:intergenic 45.0%
GATGCTCCAGATGAAGTCAA+AGG - chr5_2:52800949-52800968 None:intergenic 45.0%
!! TTTTGGGAAGCTGAAGGGTA+GGG - chr5_2:52801023-52801042 None:intergenic 45.0%
!! TCTGCTTTTGGGAAGCTGAA+GGG - chr5_2:52801028-52801047 None:intergenic 45.0%
!! ATCTGCTTTTGGGAAGCTGA+AGG - chr5_2:52801029-52801048 None:intergenic 45.0%
CCCAAAAGCAGATTGAAGAC+TGG + chr5_2:52801036-52801055 Msa0775690:CDS 45.0%
TGCTTAGGGTTGAAACTCAG+CGG + chr5_2:52801094-52801113 Msa0775690:CDS 45.0%
! GCAACTACTGATGGATGAGA+TGG + chr5_2:52801125-52801144 Msa0775690:CDS 45.0%
ATGATTCCAGTTGGAAGGAG+AGG - chr5_2:52801160-52801179 None:intergenic 45.0%
AGGCATGGAATGATTCCAGT+TGG - chr5_2:52801169-52801188 None:intergenic 45.0%
! TATTTAGTTCCCCGGTCGTA+TGG - chr5_2:52801224-52801243 None:intergenic 45.0%
ATACGACCGGGGAACTAAAT+AGG + chr5_2:52801223-52801242 Msa0775690:CDS 45.0%
GAGACCCGAAAATGTCTTCA+AGG - chr5_2:52801272-52801291 None:intergenic 45.0%
TCTCAGTTACAATCTCCGAC+TGG + chr5_2:52801354-52801373 Msa0775690:CDS 45.0%
GGACGTATTTGGATTCCAGT+CGG - chr5_2:52801372-52801391 None:intergenic 45.0%
CAATCACACTGGAAGTGGAA+TGG - chr5_2:52801428-52801447 None:intergenic 45.0%
CATTCCACTTCCAGTGTGAT+TGG + chr5_2:52801426-52801445 Msa0775690:CDS 45.0%
AGATCCAATCACACTGGAAG+TGG - chr5_2:52801433-52801452 None:intergenic 45.0%
TGATTGGATCTCCGACCTAT+AGG + chr5_2:52801442-52801461 Msa0775690:CDS 45.0%
CCCAGATGGATCAAACCTAT+AGG - chr5_2:52801460-52801479 None:intergenic 45.0%
! GAGCTGCTGCATTTTCAAAG+CGG + chr5_2:52801508-52801527 Msa0775690:CDS 45.0%
! GAAAAGGCATAAGGCTTAGC+AGG - chr5_2:52801588-52801607 None:intergenic 45.0%
! CCCCAGTTAGAAAAGGCATA+AGG - chr5_2:52801597-52801616 None:intergenic 45.0%
CACCCGATGGAAATTTGGAT+TGG + chr5_2:52801619-52801638 Msa0775690:CDS 45.0%
!! TGGAGTTAAAGGAGTACTGG+TGG - chr5_2:52801703-52801722 None:intergenic 45.0%
! AGCTGGAGTTAAAGGAGTAC+TGG - chr5_2:52801706-52801725 None:intergenic 45.0%
TTTAACTCCAGCTGCAGCTA+GGG + chr5_2:52801713-52801732 Msa0775690:CDS 45.0%
GAACAGATTCGATTCCAGCT+TGG + chr5_2:52801865-52801884 Msa0775690:CDS 45.0%
AGATTCGATTCCAGCTTGGT+TGG + chr5_2:52801869-52801888 Msa0775690:CDS 45.0%
TACAATTGCTCCAACCAAGC+TGG - chr5_2:52801882-52801901 None:intergenic 45.0%
GGAGCAATTGTACATGGATC+AGG + chr5_2:52801890-52801909 Msa0775690:CDS 45.0%
ATGGGGTGTGAGTATGTGAA+TGG + chr5_2:52799857-52799876 Msa0775690:CDS 45.0%
TGGGGTGTGAGTATGTGAAT+GGG + chr5_2:52799858-52799877 Msa0775690:CDS 45.0%
TAAAGAAGGGCAGTATCACG+AGG + chr5_2:52799883-52799902 Msa0775690:CDS 45.0%
!! ATGTTGATGGGGTTGGTTTG+TGG + chr5_2:52799981-52800000 Msa0775690:CDS 45.0%
TACATAGCTGCAACCATGAG+AGG - chr5_2:52800055-52800074 None:intergenic 45.0%
CTCATGGTTGCAGCTATGTA+TGG + chr5_2:52800055-52800074 Msa0775690:CDS 45.0%
TGCAGCTATGTATGGAAGCT+TGG + chr5_2:52800063-52800082 Msa0775690:CDS 45.0%
!! CAGGTCGGGTTGATGTTAAT+CGG + chr5_2:52800110-52800129 Msa0775690:CDS 45.0%
ATGAAGAGCAGTAGCACCAT+CGG - chr5_2:52800146-52800165 None:intergenic 45.0%
TGCTACTGCTCTTCATTGTG+CGG + chr5_2:52800150-52800169 Msa0775690:CDS 45.0%
CTCTTCATTGTGCGGTTGTT+GGG + chr5_2:52800158-52800177 Msa0775690:CDS 45.0%
TCTTCATTGTGCGGTTGTTG+GGG + chr5_2:52800159-52800178 Msa0775690:CDS 45.0%
! GATTTTGCTTGATGCATCGG+CGG + chr5_2:52800210-52800229 Msa0775690:CDS 45.0%
! GAGGATGCTACAAGCTCTTT+TGG + chr5_2:52800315-52800334 Msa0775690:CDS 45.0%
! GCTCTTTTGGATGGTACAGA+CGG + chr5_2:52800328-52800347 Msa0775690:CDS 45.0%
TCTGGAAGAGAGACATCAAC+AGG - chr5_2:52800451-52800470 None:intergenic 45.0%
TGGATGAACAAAGGGACACT+CGG - chr5_2:52800563-52800582 None:intergenic 45.0%
AGTGTCCCTTTGTTCATCCA+GGG + chr5_2:52800563-52800582 Msa0775690:CDS 45.0%
TTCATCCAGGGGAAAATGCA+AGG + chr5_2:52800575-52800594 Msa0775690:CDS 45.0%
CTTTCCGAAACTCAGGACAA+GGG - chr5_2:52800636-52800655 None:intergenic 45.0%
!!! CACACGGTATTTTTGAGTGC+TGG + chr5_2:52800689-52800708 Msa0775690:CDS 45.0%
ATCCTGCGCAGTATAAGACA+CGG + chr5_2:52800716-52800735 Msa0775690:CDS 45.0%
GTATAAGACACGGCTTTGCA+AGG + chr5_2:52800726-52800745 Msa0775690:CDS 45.0%
CTTCTTTGCTCACAAGGTTG+AGG + chr5_2:52800777-52800796 Msa0775690:CDS 45.0%
! AACCGGTAGAAGCATACAAG+GGG - chr5_2:52800810-52800829 None:intergenic 45.0%
! GAACCGGTAGAAGCATACAA+GGG - chr5_2:52800811-52800830 None:intergenic 45.0%
! AGAACCGGTAGAAGCATACA+AGG - chr5_2:52800812-52800831 None:intergenic 45.0%
AGGAGATGGAATAGCAGAAC+CGG - chr5_2:52800827-52800846 None:intergenic 45.0%
GATGGAGAACCAAGTGACAT+TGG - chr5_2:52800898-52800917 None:intergenic 45.0%
GAGGGTGGTATCAAAACAGA+TGG - chr5_2:52800916-52800935 None:intergenic 45.0%
GATGCTCCAGATGAAGTCAA+AGG - chr5_2:52800949-52800968 None:intergenic 45.0%
!! TTTTGGGAAGCTGAAGGGTA+GGG - chr5_2:52801023-52801042 None:intergenic 45.0%
!! TCTGCTTTTGGGAAGCTGAA+GGG - chr5_2:52801028-52801047 None:intergenic 45.0%
!! ATCTGCTTTTGGGAAGCTGA+AGG - chr5_2:52801029-52801048 None:intergenic 45.0%
CCCAAAAGCAGATTGAAGAC+TGG + chr5_2:52801036-52801055 Msa0775690:CDS 45.0%
TGCTTAGGGTTGAAACTCAG+CGG + chr5_2:52801094-52801113 Msa0775690:CDS 45.0%
! GCAACTACTGATGGATGAGA+TGG + chr5_2:52801125-52801144 Msa0775690:CDS 45.0%
ATGATTCCAGTTGGAAGGAG+AGG - chr5_2:52801160-52801179 None:intergenic 45.0%
AGGCATGGAATGATTCCAGT+TGG - chr5_2:52801169-52801188 None:intergenic 45.0%
! TATTTAGTTCCCCGGTCGTA+TGG - chr5_2:52801224-52801243 None:intergenic 45.0%
ATACGACCGGGGAACTAAAT+AGG + chr5_2:52801223-52801242 Msa0775690:CDS 45.0%
GAGACCCGAAAATGTCTTCA+AGG - chr5_2:52801272-52801291 None:intergenic 45.0%
TCTCAGTTACAATCTCCGAC+TGG + chr5_2:52801354-52801373 Msa0775690:CDS 45.0%
GGACGTATTTGGATTCCAGT+CGG - chr5_2:52801372-52801391 None:intergenic 45.0%
CAATCACACTGGAAGTGGAA+TGG - chr5_2:52801428-52801447 None:intergenic 45.0%
CATTCCACTTCCAGTGTGAT+TGG + chr5_2:52801426-52801445 Msa0775690:CDS 45.0%
AGATCCAATCACACTGGAAG+TGG - chr5_2:52801433-52801452 None:intergenic 45.0%
TGATTGGATCTCCGACCTAT+AGG + chr5_2:52801442-52801461 Msa0775690:CDS 45.0%
CCCAGATGGATCAAACCTAT+AGG - chr5_2:52801460-52801479 None:intergenic 45.0%
! GAGCTGCTGCATTTTCAAAG+CGG + chr5_2:52801508-52801527 Msa0775690:CDS 45.0%
! GAAAAGGCATAAGGCTTAGC+AGG - chr5_2:52801588-52801607 None:intergenic 45.0%
! CCCCAGTTAGAAAAGGCATA+AGG - chr5_2:52801597-52801616 None:intergenic 45.0%
CACCCGATGGAAATTTGGAT+TGG + chr5_2:52801619-52801638 Msa0775690:CDS 45.0%
!! TGGAGTTAAAGGAGTACTGG+TGG - chr5_2:52801703-52801722 None:intergenic 45.0%
! AGCTGGAGTTAAAGGAGTAC+TGG - chr5_2:52801706-52801725 None:intergenic 45.0%
TTTAACTCCAGCTGCAGCTA+GGG + chr5_2:52801713-52801732 Msa0775690:CDS 45.0%
GAACAGATTCGATTCCAGCT+TGG + chr5_2:52801865-52801884 Msa0775690:CDS 45.0%
AGATTCGATTCCAGCTTGGT+TGG + chr5_2:52801869-52801888 Msa0775690:CDS 45.0%
TACAATTGCTCCAACCAAGC+TGG - chr5_2:52801882-52801901 None:intergenic 45.0%
GGAGCAATTGTACATGGATC+AGG + chr5_2:52801890-52801909 Msa0775690:CDS 45.0%
TCAGCTGCAGATGATGTGGT+TGG + chr5_2:52799926-52799945 Msa0775690:CDS 50.0%
AACGAGGGTTGCGATGTTGA+TGG + chr5_2:52799968-52799987 Msa0775690:CDS 50.0%
ACGAGGGTTGCGATGTTGAT+GGG + chr5_2:52799969-52799988 Msa0775690:CDS 50.0%
!! GATGGGGTTGGTTTGTGGTA+TGG + chr5_2:52799986-52800005 Msa0775690:CDS 50.0%
!! GGGTTGGTTTGTGGTATGGA+AGG + chr5_2:52799990-52800009 Msa0775690:CDS 50.0%
TGAAGAGAGGACACCTCTCA+TGG + chr5_2:52800039-52800058 Msa0775690:CDS 50.0%
! AATCGGTCTAGTGGATCCGA+TGG + chr5_2:52800127-52800146 Msa0775690:CDS 50.0%
GCTCTTCATTGTGCGGTTGT+TGG + chr5_2:52800157-52800176 Msa0775690:CDS 50.0%
CTTCATTGTGCGGTTGTTGG+GGG + chr5_2:52800160-52800179 Msa0775690:CDS 50.0%
! GCTAGTGCTGTTGATGCCAA+CGG + chr5_2:52800235-52800254 Msa0775690:CDS 50.0%
ATCAACTGGTCGGTTACCGT+TGG - chr5_2:52800254-52800273 None:intergenic 50.0%
GCTTGTAGCATCCTCTTCCT+TGG - chr5_2:52800310-52800329 None:intergenic 50.0%
GAGTGTCCCTTTGTTCATCC+AGG + chr5_2:52800562-52800581 Msa0775690:CDS 50.0%
GTGTCCCTTTGTTCATCCAG+GGG + chr5_2:52800564-52800583 Msa0775690:CDS 50.0%
GTGTCCCTTGTCCTGAGTTT+CGG + chr5_2:52800629-52800648 Msa0775690:CDS 50.0%
CCTTTCCGAAACTCAGGACA+AGG - chr5_2:52800637-52800656 None:intergenic 50.0%
CCTTGTCCTGAGTTTCGGAA+AGG + chr5_2:52800634-52800653 Msa0775690:CDS 50.0%
CACGATCCTTTCCGAAACTC+AGG - chr5_2:52800643-52800662 None:intergenic 50.0%
CGGAAAGGATCGTGCAGTAA+AGG + chr5_2:52800649-52800668 Msa0775690:CDS 50.0%
ACACGGCTTTGCAAGGATGA+AGG + chr5_2:52800733-52800752 Msa0775690:CDS 50.0%
GCTCCAGATGAAGTCAAAGG+CGG - chr5_2:52800946-52800965 None:intergenic 50.0%
ATTAGACGGTGTCTGCCACA+TGG - chr5_2:52800992-52801011 None:intergenic 50.0%
!! CTTTTGGGAAGCTGAAGGGT+AGG - chr5_2:52801024-52801043 None:intergenic 50.0%
GCGAAAGCAGCAACTACTGA+TGG + chr5_2:52801116-52801135 Msa0775690:CDS 50.0%
! CTACTGATGGATGAGATGGC+CGG + chr5_2:52801129-52801148 Msa0775690:CDS 50.0%
GTTGGAAGGAGAGGAAAGAC+CGG - chr5_2:52801151-52801170 None:intergenic 50.0%
GTCTTTCCTCTCCTTCCAAC+TGG + chr5_2:52801151-52801170 Msa0775690:CDS 50.0%
TCTTCGACCAACCATACGAC+CGG + chr5_2:52801210-52801229 Msa0775690:CDS 50.0%
TCTTGCATTCAAAGCCGACG+CGG - chr5_2:52801490-52801509 None:intergenic 50.0%
CTAGCTGCAGCTGGAGTTAA+AGG - chr5_2:52801714-52801733 None:intergenic 50.0%
CTTTAACTCCAGCTGCAGCT+AGG + chr5_2:52801712-52801731 Msa0775690:CDS 50.0%
CTGCAGCGCCATCTTAACAA+CGG + chr5_2:52801843-52801862 Msa0775690:CDS 50.0%
TCAGCTGCAGATGATGTGGT+TGG + chr5_2:52799926-52799945 Msa0775690:CDS 50.0%
AACGAGGGTTGCGATGTTGA+TGG + chr5_2:52799968-52799987 Msa0775690:CDS 50.0%
ACGAGGGTTGCGATGTTGAT+GGG + chr5_2:52799969-52799988 Msa0775690:CDS 50.0%
!! GATGGGGTTGGTTTGTGGTA+TGG + chr5_2:52799986-52800005 Msa0775690:CDS 50.0%
!! GGGTTGGTTTGTGGTATGGA+AGG + chr5_2:52799990-52800009 Msa0775690:CDS 50.0%
TGAAGAGAGGACACCTCTCA+TGG + chr5_2:52800039-52800058 Msa0775690:CDS 50.0%
! AATCGGTCTAGTGGATCCGA+TGG + chr5_2:52800127-52800146 Msa0775690:CDS 50.0%
GCTCTTCATTGTGCGGTTGT+TGG + chr5_2:52800157-52800176 Msa0775690:CDS 50.0%
CTTCATTGTGCGGTTGTTGG+GGG + chr5_2:52800160-52800179 Msa0775690:CDS 50.0%
! GCTAGTGCTGTTGATGCCAA+CGG + chr5_2:52800235-52800254 Msa0775690:CDS 50.0%
ATCAACTGGTCGGTTACCGT+TGG - chr5_2:52800254-52800273 None:intergenic 50.0%
GCTTGTAGCATCCTCTTCCT+TGG - chr5_2:52800310-52800329 None:intergenic 50.0%
GAGTGTCCCTTTGTTCATCC+AGG + chr5_2:52800562-52800581 Msa0775690:CDS 50.0%
GTGTCCCTTTGTTCATCCAG+GGG + chr5_2:52800564-52800583 Msa0775690:CDS 50.0%
GTGTCCCTTGTCCTGAGTTT+CGG + chr5_2:52800629-52800648 Msa0775690:CDS 50.0%
CCTTTCCGAAACTCAGGACA+AGG - chr5_2:52800637-52800656 None:intergenic 50.0%
CCTTGTCCTGAGTTTCGGAA+AGG + chr5_2:52800634-52800653 Msa0775690:CDS 50.0%
CACGATCCTTTCCGAAACTC+AGG - chr5_2:52800643-52800662 None:intergenic 50.0%
CGGAAAGGATCGTGCAGTAA+AGG + chr5_2:52800649-52800668 Msa0775690:CDS 50.0%
ACACGGCTTTGCAAGGATGA+AGG + chr5_2:52800733-52800752 Msa0775690:CDS 50.0%
GCTCCAGATGAAGTCAAAGG+CGG - chr5_2:52800946-52800965 None:intergenic 50.0%
ATTAGACGGTGTCTGCCACA+TGG - chr5_2:52800992-52801011 None:intergenic 50.0%
!! CTTTTGGGAAGCTGAAGGGT+AGG - chr5_2:52801024-52801043 None:intergenic 50.0%
GCGAAAGCAGCAACTACTGA+TGG + chr5_2:52801116-52801135 Msa0775690:CDS 50.0%
! CTACTGATGGATGAGATGGC+CGG + chr5_2:52801129-52801148 Msa0775690:CDS 50.0%
GTTGGAAGGAGAGGAAAGAC+CGG - chr5_2:52801151-52801170 None:intergenic 50.0%
GTCTTTCCTCTCCTTCCAAC+TGG + chr5_2:52801151-52801170 Msa0775690:CDS 50.0%
TCTTCGACCAACCATACGAC+CGG + chr5_2:52801210-52801229 Msa0775690:CDS 50.0%
TCTTGCATTCAAAGCCGACG+CGG - chr5_2:52801490-52801509 None:intergenic 50.0%
CTAGCTGCAGCTGGAGTTAA+AGG - chr5_2:52801714-52801733 None:intergenic 50.0%
CTTTAACTCCAGCTGCAGCT+AGG + chr5_2:52801712-52801731 Msa0775690:CDS 50.0%
CTGCAGCGCCATCTTAACAA+CGG + chr5_2:52801843-52801862 Msa0775690:CDS 50.0%
CGAGGGTTGCGATGTTGATG+GGG + chr5_2:52799970-52799989 Msa0775690:CDS 55.0%
! GGTTGCGATGTTGATGGGGT+TGG + chr5_2:52799974-52799993 Msa0775690:CDS 55.0%
AGCCGTGTCTTATACTGCGC+AGG - chr5_2:52800721-52800740 None:intergenic 55.0%
CGCCCCTTGTATGCTTCTAC+CGG + chr5_2:52800805-52800824 Msa0775690:CDS 55.0%
TGAAGTCAAAGGCGGCGTTG+AGG - chr5_2:52800938-52800957 None:intergenic 55.0%
! ACGCCGCCTTTGACTTCATC+TGG + chr5_2:52800940-52800959 Msa0775690:CDS 55.0%
CTTCGACCAACCATACGACC+GGG + chr5_2:52801211-52801230 Msa0775690:CDS 55.0%
TTCGACCAACCATACGACCG+GGG + chr5_2:52801212-52801231 Msa0775690:CDS 55.0%
TAGTTCCCCGGTCGTATGGT+TGG - chr5_2:52801220-52801239 None:intergenic 55.0%
GGTCGGAGATCCAATCACAC+TGG - chr5_2:52801439-52801458 None:intergenic 55.0%
ATCTGGGGAGTTATCCGCGT+CGG + chr5_2:52801473-52801492 Msa0775690:CDS 55.0%
! AGCCAGAGCTTTATCGAGCG+CGG + chr5_2:52801531-52801550 Msa0775690:CDS 55.0%
GGGTGAGCCCCAGTTAGAAA+AGG - chr5_2:52801604-52801623 None:intergenic 55.0%
GGGCTCACCCGATGGAAATT+TGG + chr5_2:52801614-52801633 Msa0775690:CDS 55.0%
CGAGGGTTGCGATGTTGATG+GGG + chr5_2:52799970-52799989 Msa0775690:CDS 55.0%
! GGTTGCGATGTTGATGGGGT+TGG + chr5_2:52799974-52799993 Msa0775690:CDS 55.0%
AGCCGTGTCTTATACTGCGC+AGG - chr5_2:52800721-52800740 None:intergenic 55.0%
CGCCCCTTGTATGCTTCTAC+CGG + chr5_2:52800805-52800824 Msa0775690:CDS 55.0%
TGAAGTCAAAGGCGGCGTTG+AGG - chr5_2:52800938-52800957 None:intergenic 55.0%
! ACGCCGCCTTTGACTTCATC+TGG + chr5_2:52800940-52800959 Msa0775690:CDS 55.0%
CTTCGACCAACCATACGACC+GGG + chr5_2:52801211-52801230 Msa0775690:CDS 55.0%
TTCGACCAACCATACGACCG+GGG + chr5_2:52801212-52801231 Msa0775690:CDS 55.0%
TAGTTCCCCGGTCGTATGGT+TGG - chr5_2:52801220-52801239 None:intergenic 55.0%
GGTCGGAGATCCAATCACAC+TGG - chr5_2:52801439-52801458 None:intergenic 55.0%
ATCTGGGGAGTTATCCGCGT+CGG + chr5_2:52801473-52801492 Msa0775690:CDS 55.0%
! AGCCAGAGCTTTATCGAGCG+CGG + chr5_2:52801531-52801550 Msa0775690:CDS 55.0%
GGGTGAGCCCCAGTTAGAAA+AGG - chr5_2:52801604-52801623 None:intergenic 55.0%
GGGCTCACCCGATGGAAATT+TGG + chr5_2:52801614-52801633 Msa0775690:CDS 55.0%
! CGTCGCCTTGCATTTTCCCC+TGG - chr5_2:52800583-52800602 None:intergenic 60.0%
ATGCAAGGCGACGCGATCCA+AGG + chr5_2:52800590-52800609 Msa0775690:CDS 60.0%
! GTCAAAGGCGGCGTTGAGGA+GGG - chr5_2:52800934-52800953 None:intergenic 60.0%
! AGTCAAAGGCGGCGTTGAGG+AGG - chr5_2:52800935-52800954 None:intergenic 60.0%
CACATGGCTGCAGCAGCAAC+GGG - chr5_2:52800976-52800995 None:intergenic 60.0%
CCACATGGCTGCAGCAGCAA+CGG - chr5_2:52800977-52800996 None:intergenic 60.0%
CTTGATGCTGCAGGAGCAGC+AGG + chr5_2:52801330-52801349 Msa0775690:CDS 60.0%
GACGCGGATAACTCCCCAGA+TGG - chr5_2:52801474-52801493 None:intergenic 60.0%
CACCGCGCTCGATAAAGCTC+TGG - chr5_2:52801536-52801555 None:intergenic 60.0%
TCTAACTGGGGCTCACCCGA+TGG + chr5_2:52801606-52801625 Msa0775690:CDS 60.0%
! CGTCGCCTTGCATTTTCCCC+TGG - chr5_2:52800583-52800602 None:intergenic 60.0%
ATGCAAGGCGACGCGATCCA+AGG + chr5_2:52800590-52800609 Msa0775690:CDS 60.0%
! GTCAAAGGCGGCGTTGAGGA+GGG - chr5_2:52800934-52800953 None:intergenic 60.0%
! AGTCAAAGGCGGCGTTGAGG+AGG - chr5_2:52800935-52800954 None:intergenic 60.0%
CACATGGCTGCAGCAGCAAC+GGG - chr5_2:52800976-52800995 None:intergenic 60.0%
CCACATGGCTGCAGCAGCAA+CGG - chr5_2:52800977-52800996 None:intergenic 60.0%
CTTGATGCTGCAGGAGCAGC+AGG + chr5_2:52801330-52801349 Msa0775690:CDS 60.0%
GACGCGGATAACTCCCCAGA+TGG - chr5_2:52801474-52801493 None:intergenic 60.0%
CACCGCGCTCGATAAAGCTC+TGG - chr5_2:52801536-52801555 None:intergenic 60.0%
TCTAACTGGGGCTCACCCGA+TGG + chr5_2:52801606-52801625 Msa0775690:CDS 60.0%
! AAAGGCGGCGTTGAGGAGGG+TGG - chr5_2:52800931-52800950 None:intergenic 65.0%
CCGTTGCTGCTGCAGCCATG+TGG + chr5_2:52800974-52800993 Msa0775690:CDS 65.0%
TCCAGCTGCAGCTAGGGCAC+AGG + chr5_2:52801719-52801738 Msa0775690:CDS 65.0%
TCCTGTGCCCTAGCTGCAGC+TGG - chr5_2:52801723-52801742 None:intergenic 65.0%
! AAAGGCGGCGTTGAGGAGGG+TGG - chr5_2:52800931-52800950 None:intergenic 65.0%
CCGTTGCTGCTGCAGCCATG+TGG + chr5_2:52800974-52800993 Msa0775690:CDS 65.0%
TCCAGCTGCAGCTAGGGCAC+AGG + chr5_2:52801719-52801738 Msa0775690:CDS 65.0%
TCCTGTGCCCTAGCTGCAGC+TGG - chr5_2:52801723-52801742 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 52799812 52801929 52799812 ID=Msa0775690;Name=Msa0775690
chr5_2 mRNA 52799812 52801929 52799812 ID=Msa0775690-mRNA-1;Parent=Msa0775690;Name=Msa0775690-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|-1|0|1|-1|1|1|0|705
chr5_2 exon 52799812 52801929 52799812 ID=Msa0775690-mRNA-1:exon:15777;Parent=Msa0775690-mRNA-1
chr5_2 CDS 52799812 52801929 52799812 ID=Msa0775690-mRNA-1:cds;Parent=Msa0775690-mRNA-1
Gene Sequence

>Msa0775690

ATGTGCAGTGATTCTAAGAAAAAAACTTGTCAAAAGGATTTGATCATGGGGTGTGAGTATGTGAATGGGAATAAAGAAGGGCAGTATCACGAGGTTTCTTATTTGCTTGAATTTTCAGCTGCAGATGATGTGGTTGGTTTAAAAAATGCGATTGAAAACGAGGGTTGCGATGTTGATGGGGTTGGTTTGTGGTATGGAAGGAAAGTTGGTTCGAACAAATTAGGTTATGAAGAGAGGACACCTCTCATGGTTGCAGCTATGTATGGAAGCTTGGATGTATCGGCTTATATTCTTGGAACAGGTCGGGTTGATGTTAATCGGTCTAGTGGATCCGATGGTGCTACTGCTCTTCATTGTGCGGTTGTTGGGGGTTCTGCTGCTTCCCCCGAGATTATCAAGATTTTGCTTGATGCATCGGCGGATGCTAGTGCTGTTGATGCCAACGGTAACCGACCAGTTGATTTGATTGTTTCGCTGGCCAATTCTATCTTCAATCCAAGGAAGAGGATGCTACAAGCTCTTTTGGATGGTACAGACGGTGCTGATCAGACATGTCTTCTGTTTCCGGAGACAATTGATGACATTGACGAATATCAAAGGCAAGATGTAAACACGCCTCGTGTTTCAAAAGATTATCCTGTTGATGTCTCTCTTCCAGACATTAAGAATGGGATATATAGTACCGATGAGTTTAGGATGTATACATTCAAAGTGAAGCCTTGTTCAAGGGCTTATTCTCATGATTGGACCGAGTGTCCCTTTGTTCATCCAGGGGAAAATGCAAGGCGACGCGATCCAAGGAAATATCATTATAGCTGTGTCCCTTGTCCTGAGTTTCGGAAAGGATCGTGCAGTAAAGGAGATTCTTGTGACTATGCACACGGTATTTTTGAGTGCTGGCTTCATCCTGCGCAGTATAAGACACGGCTTTGCAAGGATGAAGGTTCATGCATGAGAAGAGTTTGCTTCTTTGCTCACAAGGTTGAGGAGCTTCGCCCCTTGTATGCTTCTACCGGTTCTGCTATTCCATCTCCTAGATCATATTACAGTACTGCTTCTACATTAGAGATGGGTTCAATTAGCCCAATGTCACTTGGTTCTCCATCTGTTTTGATACCACCCTCCTCAACGCCGCCTTTGACTTCATCTGGAGCATCGTCTCCCGTTGCTGCTGCAGCCATGTGGCAGACACCGTCTAATGTTTCGATCCCTACCCTTCAGCTTCCCAAAAGCAGATTGAAGACTGGAATGACCGCTAGAGATATTAATTCAGATATTGCAATGCTTAGGGTTGAAACTCAGCGGCGAAAGCAGCAACTACTGATGGATGAGATGGCCGGTCTTTCCTCTCCTTCCAACTGGAATCATTCCATGCCTAACAGTCCATCTTTTTCGGTTTCTTCGACCAACCATACGACCGGGGAACTAAATAGGTTTTCGGGGGTGAATCCTACAAACCTTGAAGACATTTTCGGGTCTCTTGATCCATCAATGTTGCATAAATTCCACAGAATTTCACTTGATGCTGCAGGAGCAGCAGGATCTCAGTTACAATCTCCGACTGGAATCCAAATACGTCCGAATATGAATCAGCATCTGCAACAAAACTATGGCCATTCCACTTCCAGTGTGATTGGATCTCCGACCTATAGGTTTGATCCATCTGGGGAGTTATCCGCGTCGGCTTTGAATGCAAGAGCTGCTGCATTTTCAAAGCGGAGCCAGAGCTTTATCGAGCGCGGTGTCACAAACCGTCATTCTGAGCTTCATTCTCCTGCTAAGCCTTATGCCTTTTCTAACTGGGGCTCACCCGATGGAAATTTGGATTGGACTTCACACGGAGAAGAACTGAATAAGCTGAGGAAATCATCTTCATTTGGATTTCGAACCACCAGTACTCCTTTAACTCCAGCTGCAGCTAGGGCACAGGAAAATGACTATGAACCAGATGTGTCTTGGGTTAATTCACTTGTGAAGGATGCTACACCGCAAGAATCTCATCAGTTTAGCGTTGAAGATCAGACAAGGAAACTGCAGCGCCATCTTAACAACGGAACAGATTCGATTCCAGCTTGGTTGGAGCAATTGTACATGGATCAGGAGCAAATAGTGCAGTGA
Protein sequence

>Msa0775690

MCSDSKKKTCQKDLIMGCEYVNGNKEGQYHEVSYLLEFSAADDVVGLKNAIENEGCDVDGVGLWYGRKVGSNKLGYEERTPLMVAAMYGSLDVSAYILGTGRVDVNRSSGSDGATALHCAVVGGSAASPEIIKILLDASADASAVDANGNRPVDLIVSLANSIFNPRKRMLQALLDGTDGADQTCLLFPETIDDIDEYQRQDVNTPRVSKDYPVDVSLPDIKNGIYSTDEFRMYTFKVKPCSRAYSHDWTECPFVHPGENARRRDPRKYHYSCVPCPEFRKGSCSKGDSCDYAHGIFECWLHPAQYKTRLCKDEGSCMRRVCFFAHKVEELRPLYASTGSAIPSPRSYYSTASTLEMGSISPMSLGSPSVLIPPSSTPPLTSSGASSPVAAAAMWQTPSNVSIPTLQLPKSRLKTGMTARDINSDIAMLRVETQRRKQQLLMDEMAGLSSPSNWNHSMPNSPSFSVSSTNHTTGELNRFSGVNPTNLEDIFGSLDPSMLHKFHRISLDAAGAAGSQLQSPTGIQIRPNMNQHLQQNYGHSTSSVIGSPTYRFDPSGELSASALNARAAAFSKRSQSFIERGVTNRHSELHSPAKPYAFSNWGSPDGNLDWTSHGEELNKLRKSSSFGFRTTSTPLTPAAARAQENDYEPDVSWVNSLVKDATPQESHQFSVEDQTRKLQRHLNNGTDSIPAWLEQLYMDQEQIVQ*