Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0848440 | XP_003615949.1 | 95.904 | 586 | 15 | 6 | 1 | 582 | 1 | 581 | 0.0 | 1138 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0848440 | sp|Q6B6R4|WRK24_ORYSI | 49.259 | 607 | 229 | 22 | 1 | 581 | 1 | 554 | 2.89e-134 | 405 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0848440 | G7K5T2 | 95.904 | 586 | 15 | 6 | 1 | 582 | 1 | 581 | 0.0 | 1138 |
Gene ID | Type | Classification |
---|---|---|
Msa0848440 | TF | WRKY |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0011050 | Msa0848440 | 0.806530 | 7.866257e-50 | -8.615850e-47 |
Msa0043850 | Msa0848440 | 0.826225 | 3.048553e-54 | -8.615850e-47 |
Msa0729350 | Msa0848440 | 0.824923 | 6.203734e-54 | -8.615850e-47 |
Msa0734940 | Msa0848440 | 0.890360 | 1.056677e-73 | -8.615850e-47 |
Msa0734950 | Msa0848440 | 0.851259 | 9.968797e-61 | -8.615850e-47 |
Msa0769720 | Msa0848440 | 0.822645 | 2.120749e-53 | -8.615850e-47 |
Msa0775690 | Msa0848440 | 0.846002 | 2.854163e-59 | -8.615850e-47 |
Msa0776880 | Msa0848440 | 0.835593 | 1.533164e-56 | -8.615850e-47 |
Msa0790920 | Msa0848440 | 0.812418 | 4.282939e-51 | -8.615850e-47 |
Msa0807670 | Msa0848440 | 0.829634 | 4.611936e-55 | -8.615850e-47 |
Msa0807680 | Msa0848440 | 0.826805 | 2.217292e-54 | -8.615850e-47 |
Msa0814080 | Msa0848440 | 0.882760 | 7.951397e-71 | -8.615850e-47 |
Msa0137980 | Msa0848440 | 0.826422 | 2.737226e-54 | -8.615850e-47 |
Msa0151220 | Msa0848440 | 0.811443 | 6.983265e-51 | -8.615850e-47 |
Msa0196880 | Msa0848440 | 0.809997 | 1.434734e-50 | -8.615850e-47 |
Msa0223140 | Msa0848440 | 0.827951 | 1.178197e-54 | -8.615850e-47 |
Msa0238710 | Msa0848440 | 0.863931 | 1.750063e-64 | -8.615850e-47 |
Msa0365950 | Msa0848440 | 0.835477 | 1.639985e-56 | -8.615850e-47 |
Msa0264500 | Msa0848440 | 0.814681 | 1.361201e-51 | -8.615850e-47 |
Msa0264680 | Msa0848440 | 0.815451 | 9.182767e-52 | -8.615850e-47 |
Msa0276430 | Msa0848440 | 0.828172 | 1.041943e-54 | -8.615850e-47 |
Msa0302510 | Msa0848440 | 0.838732 | 2.415111e-57 | -8.615850e-47 |
Msa0302730 | Msa0848440 | 0.801158 | 1.027588e-48 | -8.615850e-47 |
Msa0316470 | Msa0848440 | 0.853179 | 2.835625e-61 | -8.615850e-47 |
Msa0339720 | Msa0848440 | 0.827012 | 1.978363e-54 | -8.615850e-47 |
Msa0505470 | Msa0848440 | 0.816588 | 5.117459e-52 | -8.615850e-47 |
Msa0848440 | Msa0853630 | 0.817155 | 3.819232e-52 | -8.615850e-47 |
Msa0848440 | Msa1000800 | 0.810949 | 8.935200e-51 | -8.615850e-47 |
Msa0848440 | Msa1031460 | 0.811804 | 5.829039e-51 | -8.615850e-47 |
Msa0848440 | Msa1070540 | 0.812047 | 5.160475e-51 | -8.615850e-47 |
Msa0848440 | Msa1082520 | 0.852936 | 3.328305e-61 | -8.615850e-47 |
Msa0848440 | Msa1082600 | 0.841696 | 4.062212e-58 | -8.615850e-47 |
Msa0848440 | Msa1098970 | 0.800274 | 1.556317e-48 | -8.615850e-47 |
Msa0848440 | Msa1101240 | 0.808412 | 3.137106e-50 | -8.615850e-47 |
Msa0848440 | Msa1121300 | 0.833846 | 4.217198e-56 | -8.615850e-47 |
Msa0848440 | Msa1127360 | 0.821578 | 3.748304e-53 | -8.615850e-47 |
Msa0848440 | Msa1156490 | 0.827938 | 1.186642e-54 | -8.615850e-47 |
Msa0848440 | Msa1165430 | 0.830937 | 2.216607e-55 | -8.615850e-47 |
Msa0848440 | Msa1168640 | 0.804914 | 1.718823e-49 | -8.615850e-47 |
Msa0848440 | Msa1171450 | 0.801041 | 1.085583e-48 | -8.615850e-47 |
Msa0848440 | Msa1212470 | 0.810631 | 1.046967e-50 | -8.615850e-47 |
Msa0848440 | Msa1225580 | 0.806641 | 7.453203e-50 | -8.615850e-47 |
Msa0848440 | Msa1299780 | 0.838310 | 3.102698e-57 | -8.615850e-47 |
Msa0848440 | Msa1329900 | 0.810626 | 1.049496e-50 | -8.615850e-47 |
Msa0848440 | Msa1355510 | 0.815247 | 1.019271e-51 | -8.615850e-47 |
Msa0848440 | Msa1379020 | 0.803789 | 2.947645e-49 | -8.615850e-47 |
Msa0848440 | Msa1443400 | 0.800244 | 1.578414e-48 | -8.615850e-47 |
Msa0848440 | Msa1451990 | 0.816505 | 5.343126e-52 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0848440 | MtrunA17_Chr5g0432161 | 95.741 | 587 | 15 | 7 | 1 | 582 | 1 | 582 | 0.0 | 1133 |
Msa0848440 | MtrunA17_Chr3g0106491 | 55.342 | 571 | 165 | 21 | 35 | 581 | 3 | 507 | 2.76e-171 | 496 |
Msa0848440 | MtrunA17_Chr7g0243891 | 47.359 | 549 | 222 | 18 | 58 | 581 | 35 | 541 | 9.20e-137 | 409 |
Msa0848440 | MtrunA17_Chr4g0004911 | 48.276 | 406 | 151 | 14 | 81 | 480 | 47 | 399 | 9.93e-104 | 322 |
Msa0848440 | MtrunA17_Chr3g0079691 | 41.935 | 527 | 215 | 18 | 80 | 536 | 110 | 615 | 3.99e-95 | 306 |
Msa0848440 | MtrunA17_Chr5g0445311 | 41.935 | 434 | 210 | 9 | 59 | 481 | 26 | 428 | 8.49e-91 | 290 |
Msa0848440 | MtrunA17_Chr5g0445311 | 50.649 | 77 | 24 | 2 | 417 | 493 | 200 | 262 | 3.07e-15 | 79.0 |
Msa0848440 | MtrunA17_Chr3g0101131 | 40.466 | 472 | 187 | 16 | 61 | 479 | 47 | 477 | 2.04e-87 | 282 |
Msa0848440 | MtrunA17_Chr3g0101131 | 52.000 | 75 | 22 | 2 | 417 | 491 | 243 | 303 | 1.23e-15 | 80.1 |
Msa0848440 | MtrunA17_Chr7g0218081 | 39.458 | 517 | 229 | 17 | 5 | 494 | 27 | 486 | 3.24e-85 | 275 |
Msa0848440 | MtrunA17_Chr7g0218081 | 51.190 | 84 | 27 | 2 | 417 | 500 | 228 | 297 | 6.32e-17 | 84.0 |
Msa0848440 | MtrunA17_Chr5g0418191 | 49.485 | 291 | 116 | 9 | 213 | 486 | 112 | 388 | 8.27e-79 | 255 |
Msa0848440 | MtrunA17_Chr5g0418191 | 41.667 | 120 | 64 | 4 | 220 | 335 | 298 | 415 | 9.38e-16 | 79.7 |
Msa0848440 | MtrunA17_Chr7g0249311 | 50.175 | 285 | 96 | 4 | 236 | 479 | 175 | 454 | 2.40e-78 | 260 |
Msa0848440 | MtrunA17_Chr7g0249311 | 59.701 | 67 | 26 | 1 | 417 | 483 | 179 | 244 | 7.27e-17 | 84.3 |
Msa0848440 | MtrunA17_Chr7g0249311 | 46.078 | 102 | 44 | 4 | 240 | 331 | 392 | 492 | 9.56e-16 | 80.9 |
Msa0848440 | MtrunA17_Chr7g0263531 | 48.438 | 256 | 105 | 6 | 232 | 476 | 181 | 420 | 8.03e-75 | 245 |
Msa0848440 | MtrunA17_Chr7g0263531 | 30.573 | 157 | 87 | 4 | 164 | 298 | 264 | 420 | 2.26e-12 | 69.3 |
Msa0848440 | MtrunA17_Chr4g0042831 | 48.617 | 253 | 83 | 6 | 235 | 486 | 140 | 346 | 5.07e-70 | 231 |
Msa0848440 | MtrunA17_Chr5g0447701 | 42.629 | 251 | 127 | 4 | 230 | 480 | 82 | 315 | 7.17e-53 | 185 |
Msa0848440 | MtrunA17_Chr4g0074001 | 37.722 | 281 | 148 | 7 | 206 | 479 | 161 | 421 | 7.02e-47 | 172 |
Msa0848440 | MtrunA17_Chr7g0249301 | 80.488 | 82 | 16 | 0 | 398 | 479 | 273 | 354 | 4.56e-42 | 155 |
Msa0848440 | MtrunA17_Chr7g0249301 | 66.667 | 72 | 24 | 0 | 241 | 312 | 63 | 134 | 2.80e-25 | 107 |
Msa0848440 | MtrunA17_Chr7g0249301 | 60.000 | 70 | 23 | 3 | 416 | 483 | 61 | 127 | 1.09e-15 | 79.3 |
Msa0848440 | MtrunA17_Chr7g0249301 | 58.065 | 62 | 21 | 2 | 240 | 298 | 292 | 351 | 2.26e-14 | 75.1 |
Msa0848440 | MtrunA17_Chr5g0447711 | 30.844 | 308 | 175 | 7 | 179 | 480 | 18 | 293 | 9.22e-37 | 139 |
Msa0848440 | MtrunA17_Chr5g0432071 | 49.286 | 140 | 66 | 3 | 211 | 349 | 76 | 211 | 1.17e-34 | 130 |
Msa0848440 | MtrunA17_Chr5g0432071 | 50.000 | 78 | 35 | 2 | 417 | 491 | 104 | 180 | 8.58e-17 | 79.3 |
Msa0848440 | MtrunA17_Chr8g0335811 | 60.870 | 92 | 34 | 1 | 382 | 473 | 121 | 210 | 1.81e-33 | 127 |
Msa0848440 | MtrunA17_Chr8g0335811 | 36.842 | 133 | 66 | 4 | 182 | 296 | 79 | 211 | 6.80e-16 | 77.4 |
Msa0848440 | MtrunA17_Chr1g0188941 | 67.089 | 79 | 26 | 0 | 398 | 476 | 32 | 110 | 2.26e-33 | 123 |
Msa0848440 | MtrunA17_Chr1g0188941 | 45.122 | 82 | 39 | 2 | 223 | 298 | 29 | 110 | 3.36e-17 | 77.8 |
Msa0848440 | MtrunA17_Chr3g0129361 | 66.216 | 74 | 25 | 0 | 400 | 473 | 127 | 200 | 1.01e-29 | 116 |
Msa0848440 | MtrunA17_Chr3g0129361 | 55.172 | 58 | 25 | 1 | 240 | 296 | 144 | 201 | 9.19e-15 | 73.9 |
Msa0848440 | MtrunA17_Chr8g0383351 | 65.333 | 75 | 25 | 1 | 400 | 473 | 142 | 216 | 2.43e-28 | 113 |
Msa0848440 | MtrunA17_Chr8g0383351 | 55.172 | 58 | 25 | 1 | 240 | 296 | 160 | 217 | 6.36e-15 | 74.7 |
Msa0848440 | MtrunA17_Chr4g0051881 | 47.581 | 124 | 51 | 2 | 374 | 483 | 122 | 245 | 1.09e-26 | 111 |
Msa0848440 | MtrunA17_Chr4g0051881 | 55.072 | 69 | 30 | 1 | 240 | 307 | 178 | 246 | 3.29e-16 | 80.1 |
Msa0848440 | MtrunA17_Chr2g0294231 | 62.338 | 77 | 29 | 0 | 401 | 477 | 187 | 263 | 3.46e-26 | 110 |
Msa0848440 | MtrunA17_Chr2g0294231 | 52.941 | 68 | 31 | 1 | 240 | 306 | 203 | 270 | 4.48e-15 | 77.4 |
Msa0848440 | MtrunA17_Chr1g0150801 | 60.526 | 76 | 29 | 1 | 398 | 473 | 84 | 158 | 4.58e-26 | 104 |
Msa0848440 | MtrunA17_Chr1g0150801 | 50.769 | 65 | 31 | 1 | 232 | 295 | 94 | 158 | 1.13e-14 | 72.0 |
Msa0848440 | MtrunA17_Chr7g0270191 | 52.747 | 91 | 43 | 0 | 401 | 491 | 129 | 219 | 7.79e-26 | 107 |
Msa0848440 | MtrunA17_Chr7g0270191 | 37.273 | 110 | 62 | 3 | 210 | 312 | 109 | 218 | 2.79e-14 | 73.9 |
Msa0848440 | MtrunA17_Chr1g0194481 | 53.846 | 91 | 42 | 0 | 401 | 491 | 142 | 232 | 7.84e-26 | 108 |
Msa0848440 | MtrunA17_Chr1g0194481 | 51.562 | 64 | 30 | 1 | 240 | 302 | 158 | 221 | 6.39e-14 | 73.2 |
Msa0848440 | MtrunA17_Chr8g0386241 | 47.059 | 102 | 54 | 0 | 392 | 493 | 78 | 179 | 3.10e-25 | 102 |
Msa0848440 | MtrunA17_Chr8g0386241 | 56.140 | 57 | 24 | 1 | 240 | 295 | 103 | 159 | 4.64e-15 | 73.6 |
Msa0848440 | MtrunA17_Chr5g0443131 | 60.759 | 79 | 30 | 1 | 403 | 480 | 143 | 221 | 5.65e-25 | 105 |
Msa0848440 | MtrunA17_Chr5g0443131 | 52.239 | 67 | 31 | 1 | 240 | 305 | 157 | 223 | 6.29e-15 | 75.9 |
Msa0848440 | MtrunA17_Chr5g0418781 | 54.878 | 82 | 37 | 0 | 392 | 473 | 99 | 180 | 8.91e-25 | 104 |
Msa0848440 | MtrunA17_Chr5g0418781 | 57.895 | 57 | 23 | 1 | 240 | 295 | 124 | 180 | 1.01e-12 | 68.9 |
Msa0848440 | MtrunA17_Chr7g0248721 | 53.333 | 90 | 41 | 1 | 384 | 473 | 108 | 196 | 9.84e-25 | 102 |
Msa0848440 | MtrunA17_Chr7g0248721 | 49.231 | 65 | 31 | 2 | 232 | 295 | 133 | 196 | 2.03e-12 | 67.0 |
Msa0848440 | MtrunA17_Chr7g0224801 | 54.321 | 81 | 37 | 0 | 408 | 488 | 84 | 164 | 1.19e-24 | 100 |
Msa0848440 | MtrunA17_Chr7g0224801 | 52.632 | 57 | 26 | 1 | 240 | 295 | 93 | 149 | 1.44e-13 | 68.9 |
Msa0848440 | MtrunA17_Chr4g0060271 | 45.946 | 111 | 52 | 3 | 370 | 476 | 209 | 315 | 4.00e-24 | 106 |
Msa0848440 | MtrunA17_Chr4g0060271 | 52.459 | 61 | 27 | 2 | 240 | 298 | 255 | 315 | 9.19e-14 | 74.3 |
Msa0848440 | MtrunA17_Chr2g0302391 | 49.020 | 102 | 50 | 2 | 379 | 478 | 172 | 273 | 6.75e-24 | 104 |
Msa0848440 | MtrunA17_Chr2g0302391 | 39.535 | 86 | 45 | 3 | 234 | 312 | 200 | 285 | 1.57e-11 | 66.6 |
Msa0848440 | MtrunA17_Chr4g0068541 | 58.442 | 77 | 32 | 0 | 401 | 477 | 192 | 268 | 7.67e-24 | 104 |
Msa0848440 | MtrunA17_Chr4g0068541 | 53.125 | 64 | 29 | 1 | 240 | 302 | 208 | 271 | 8.87e-15 | 76.6 |
Msa0848440 | MtrunA17_Chr3g0099641 | 47.727 | 88 | 45 | 1 | 390 | 476 | 224 | 311 | 8.54e-24 | 104 |
Msa0848440 | MtrunA17_Chr3g0099641 | 40.000 | 85 | 49 | 2 | 241 | 323 | 252 | 336 | 1.15e-13 | 73.6 |
Msa0848440 | MtrunA17_Chr4g0075201 | 52.381 | 84 | 39 | 1 | 396 | 478 | 246 | 329 | 5.12e-23 | 102 |
Msa0848440 | MtrunA17_Chr4g0075201 | 49.180 | 61 | 29 | 2 | 240 | 298 | 267 | 327 | 3.66e-12 | 68.9 |
Msa0848440 | MtrunA17_Chr3g0129321 | 54.667 | 75 | 34 | 0 | 403 | 477 | 104 | 178 | 6.04e-23 | 97.1 |
Msa0848440 | MtrunA17_Chr3g0129321 | 53.333 | 60 | 27 | 1 | 240 | 298 | 118 | 177 | 3.23e-13 | 68.9 |
Msa0848440 | MtrunA17_Chr2g0322391 | 52.381 | 84 | 39 | 1 | 396 | 478 | 328 | 411 | 8.76e-23 | 102 |
Msa0848440 | MtrunA17_Chr2g0322391 | 39.759 | 83 | 48 | 2 | 240 | 320 | 349 | 431 | 2.54e-12 | 69.7 |
Msa0848440 | MtrunA17_Chr8g0383251 | 53.425 | 73 | 34 | 0 | 404 | 476 | 95 | 167 | 1.01e-22 | 95.9 |
Msa0848440 | MtrunA17_Chr8g0383251 | 53.333 | 60 | 27 | 1 | 240 | 298 | 108 | 167 | 2.92e-13 | 68.6 |
Msa0848440 | MtrunA17_Chr2g0288871 | 53.165 | 79 | 36 | 1 | 399 | 476 | 287 | 365 | 1.02e-22 | 102 |
Msa0848440 | MtrunA17_Chr2g0288871 | 50.000 | 60 | 28 | 2 | 241 | 298 | 306 | 365 | 1.37e-12 | 70.5 |
Msa0848440 | MtrunA17_Chr4g0051181 | 53.165 | 79 | 36 | 1 | 401 | 478 | 227 | 305 | 1.33e-22 | 101 |
Msa0848440 | MtrunA17_Chr4g0051181 | 53.333 | 60 | 26 | 2 | 241 | 298 | 244 | 303 | 3.15e-13 | 72.4 |
Msa0848440 | MtrunA17_Chr7g0270831 | 48.837 | 86 | 43 | 1 | 401 | 485 | 200 | 285 | 1.63e-22 | 100 |
Msa0848440 | MtrunA17_Chr7g0270831 | 50.000 | 60 | 28 | 2 | 241 | 298 | 217 | 276 | 2.46e-12 | 69.3 |
Msa0848440 | MtrunA17_Chr7g0216891 | 55.000 | 80 | 31 | 2 | 395 | 473 | 201 | 276 | 5.31e-22 | 100 |
Msa0848440 | MtrunA17_Chr7g0216891 | 51.724 | 58 | 26 | 2 | 240 | 295 | 219 | 276 | 1.02e-11 | 67.8 |
Msa0848440 | MtrunA17_Chr1g0189391 | 47.959 | 98 | 47 | 2 | 377 | 473 | 60 | 154 | 1.81e-21 | 95.9 |
Msa0848440 | MtrunA17_Chr1g0189391 | 50.847 | 59 | 27 | 2 | 240 | 296 | 97 | 155 | 3.02e-11 | 65.1 |
Msa0848440 | MtrunA17_Chr4g0025061 | 46.237 | 93 | 49 | 1 | 387 | 478 | 330 | 422 | 4.47e-21 | 97.4 |
Msa0848440 | MtrunA17_Chr4g0025061 | 41.096 | 73 | 41 | 2 | 241 | 311 | 361 | 433 | 8.38e-11 | 64.7 |
Msa0848440 | MtrunA17_Chr4g0053281 | 51.765 | 85 | 37 | 2 | 398 | 481 | 250 | 331 | 5.21e-21 | 94.7 |
Msa0848440 | MtrunA17_Chr4g0053281 | 50.000 | 58 | 27 | 2 | 241 | 296 | 267 | 324 | 7.25e-13 | 70.1 |
Msa0848440 | MtrunA17_Chr1g0147881 | 56.098 | 82 | 32 | 2 | 398 | 478 | 246 | 324 | 1.12e-20 | 93.6 |
Msa0848440 | MtrunA17_Chr1g0147881 | 54.386 | 57 | 24 | 2 | 241 | 295 | 263 | 319 | 6.48e-12 | 67.4 |
Msa0848440 | MtrunA17_Chr4g0025051 | 37.879 | 132 | 81 | 1 | 347 | 477 | 265 | 396 | 1.19e-20 | 95.9 |
Msa0848440 | MtrunA17_Chr7g0238921 | 37.013 | 154 | 67 | 5 | 417 | 547 | 124 | 270 | 6.94e-20 | 90.9 |
Msa0848440 | MtrunA17_Chr7g0238921 | 63.158 | 57 | 20 | 1 | 240 | 295 | 124 | 180 | 6.92e-16 | 79.0 |
Msa0848440 | MtrunA17_Chr6g0485431 | 49.398 | 83 | 41 | 1 | 395 | 476 | 132 | 214 | 7.71e-20 | 91.7 |
Msa0848440 | MtrunA17_Chr6g0485431 | 37.168 | 113 | 53 | 5 | 238 | 332 | 152 | 264 | 4.81e-14 | 73.9 |
Msa0848440 | MtrunA17_Chr6g0468181 | 68.519 | 54 | 17 | 0 | 256 | 309 | 18 | 71 | 1.76e-19 | 84.3 |
Msa0848440 | MtrunA17_Chr3g0136961 | 53.425 | 73 | 31 | 3 | 404 | 473 | 123 | 195 | 2.10e-19 | 89.0 |
Msa0848440 | MtrunA17_Chr3g0136961 | 33.987 | 153 | 76 | 6 | 153 | 299 | 66 | 199 | 2.37e-16 | 80.1 |
Msa0848440 | MtrunA17_Chr5g0401821 | 51.899 | 79 | 37 | 1 | 398 | 475 | 180 | 258 | 3.79e-19 | 87.8 |
Msa0848440 | MtrunA17_Chr5g0401821 | 50.000 | 58 | 27 | 2 | 241 | 296 | 200 | 257 | 1.68e-12 | 68.2 |
Msa0848440 | MtrunA17_Chr1g0150271 | 50.794 | 63 | 30 | 1 | 415 | 476 | 99 | 161 | 1.32e-18 | 85.9 |
Msa0848440 | MtrunA17_Chr1g0150271 | 38.889 | 90 | 45 | 3 | 229 | 308 | 82 | 171 | 1.91e-12 | 67.8 |
Msa0848440 | MtrunA17_Chr4g0071521 | 48.276 | 87 | 44 | 1 | 397 | 482 | 225 | 311 | 1.37e-18 | 87.0 |
Msa0848440 | MtrunA17_Chr4g0071521 | 48.276 | 58 | 28 | 2 | 241 | 296 | 246 | 303 | 8.11e-11 | 63.5 |
Msa0848440 | MtrunA17_Chr4g0001361 | 43.396 | 106 | 49 | 4 | 387 | 487 | 137 | 236 | 1.48e-18 | 87.0 |
Msa0848440 | MtrunA17_Chr4g0001361 | 51.667 | 60 | 27 | 2 | 241 | 298 | 163 | 222 | 3.40e-14 | 73.9 |
Msa0848440 | MtrunA17_Chr2g0333851 | 54.688 | 64 | 28 | 1 | 415 | 477 | 167 | 230 | 2.72e-18 | 86.3 |
Msa0848440 | MtrunA17_Chr2g0333851 | 50.000 | 60 | 28 | 2 | 241 | 298 | 170 | 229 | 6.44e-13 | 70.1 |
Msa0848440 | MtrunA17_Chr1g0150281 | 41.935 | 93 | 47 | 4 | 387 | 473 | 106 | 197 | 3.96e-18 | 85.1 |
Msa0848440 | MtrunA17_Chr1g0150281 | 50.877 | 57 | 26 | 2 | 241 | 295 | 141 | 197 | 1.28e-13 | 71.6 |
Msa0848440 | MtrunA17_Chr3g0139021 | 48.718 | 78 | 39 | 1 | 398 | 474 | 295 | 372 | 1.46e-16 | 82.0 |
Msa0848440 | MtrunA17_Chr7g0228941 | 49.351 | 77 | 36 | 2 | 398 | 473 | 35 | 109 | 1.58e-16 | 76.3 |
Msa0848440 | MtrunA17_Chr1g0184691 | 49.351 | 77 | 38 | 1 | 398 | 473 | 274 | 350 | 2.83e-16 | 80.9 |
Msa0848440 | MtrunA17_Chr1g0184691 | 54.237 | 59 | 25 | 2 | 241 | 297 | 294 | 352 | 2.33e-13 | 72.0 |
Msa0848440 | MtrunA17_Chr4g0024391 | 39.785 | 93 | 55 | 1 | 387 | 478 | 199 | 291 | 6.15e-16 | 80.9 |
Msa0848440 | MtrunA17_Chr2g0284321 | 52.381 | 63 | 29 | 1 | 418 | 479 | 36 | 98 | 2.01e-15 | 75.5 |
Msa0848440 | MtrunA17_Chr2g0284321 | 50.000 | 60 | 28 | 2 | 241 | 298 | 36 | 95 | 5.34e-12 | 65.5 |
Msa0848440 | MtrunA17_Chr8g0379461 | 41.860 | 86 | 48 | 2 | 418 | 502 | 77 | 161 | 2.34e-15 | 76.3 |
Msa0848440 | MtrunA17_Chr8g0379461 | 39.785 | 93 | 48 | 4 | 241 | 331 | 77 | 163 | 3.33e-12 | 66.6 |
Msa0848440 | MtrunA17_Chr2g0289181 | 53.226 | 62 | 28 | 1 | 418 | 478 | 15 | 76 | 2.85e-15 | 75.5 |
Msa0848440 | MtrunA17_Chr2g0289181 | 58.333 | 60 | 23 | 2 | 241 | 298 | 15 | 74 | 4.29e-15 | 75.1 |
Msa0848440 | MtrunA17_Chr7g0270051 | 34.513 | 113 | 61 | 2 | 390 | 489 | 14 | 126 | 8.24e-15 | 74.7 |
Msa0848440 | MtrunA17_Chr7g0270051 | 51.667 | 60 | 27 | 2 | 241 | 298 | 54 | 113 | 1.42e-11 | 65.1 |
Msa0848440 | MtrunA17_Chr1g0202461 | 38.947 | 95 | 56 | 2 | 398 | 491 | 243 | 336 | 1.56e-13 | 72.8 |
Msa0848440 | MtrunA17_Chr1g0202461 | 49.315 | 73 | 33 | 3 | 239 | 309 | 260 | 330 | 1.04e-12 | 70.1 |
Msa0848440 | MtrunA17_Chr2g0293481 | 37.190 | 121 | 66 | 3 | 380 | 498 | 238 | 350 | 3.58e-13 | 72.0 |
Msa0848440 | MtrunA17_Chr5g0419241 | 54.167 | 48 | 22 | 0 | 396 | 443 | 56 | 103 | 4.09e-13 | 65.9 |
Msa0848440 | MtrunA17_Chr2g0319961 | 47.619 | 63 | 32 | 1 | 418 | 479 | 81 | 143 | 4.24e-13 | 69.7 |
Msa0848440 | MtrunA17_Chr8g0387501 | 43.243 | 74 | 41 | 1 | 416 | 488 | 128 | 201 | 4.40e-13 | 70.1 |
Msa0848440 | MtrunA17_Chr8g0387501 | 43.011 | 93 | 44 | 5 | 241 | 326 | 130 | 220 | 1.96e-12 | 67.8 |
Msa0848440 | MtrunA17_Chr8g0348311 | 46.154 | 78 | 40 | 2 | 418 | 494 | 156 | 232 | 1.24e-12 | 69.3 |
Msa0848440 | MtrunA17_Chr3g0126391 | 45.588 | 68 | 33 | 2 | 230 | 293 | 123 | 190 | 1.64e-12 | 68.9 |
Msa0848440 | MtrunA17_Chr3g0126391 | 50.847 | 59 | 26 | 1 | 416 | 471 | 132 | 190 | 4.59e-12 | 67.8 |
Msa0848440 | MtrunA17_Chr1g0188961 | 58.824 | 51 | 20 | 1 | 437 | 487 | 3 | 52 | 1.83e-12 | 62.8 |
Msa0848440 | MtrunA17_Chr8g0387981 | 51.724 | 58 | 24 | 2 | 240 | 293 | 132 | 189 | 2.10e-12 | 68.9 |
Msa0848440 | MtrunA17_Chr8g0387981 | 50.000 | 58 | 26 | 1 | 417 | 471 | 132 | 189 | 5.31e-11 | 64.7 |
Msa0848440 | MtrunA17_Chr7g0248691 | 47.692 | 65 | 33 | 1 | 418 | 481 | 155 | 219 | 4.85e-12 | 67.4 |
Msa0848440 | MtrunA17_Chr8g0347251 | 42.254 | 71 | 32 | 3 | 240 | 306 | 136 | 201 | 5.89e-11 | 64.3 |
Msa0848440 | MtrunA17_Chr7g0275531 | 46.269 | 67 | 28 | 3 | 240 | 298 | 118 | 184 | 8.95e-11 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0848440 | AT2G38470.1 | 56.145 | 358 | 124 | 12 | 237 | 581 | 181 | 518 | 9.55e-109 | 336 |
Msa0848440 | AT2G03340.1 | 44.292 | 438 | 188 | 14 | 60 | 496 | 108 | 490 | 2.07e-93 | 296 |
Msa0848440 | AT4G26640.7 | 41.527 | 419 | 222 | 7 | 76 | 486 | 7 | 410 | 1.77e-90 | 288 |
Msa0848440 | AT4G26640.2 | 41.527 | 419 | 222 | 7 | 76 | 486 | 47 | 450 | 4.18e-90 | 289 |
Msa0848440 | AT2G30250.1 | 43.162 | 468 | 161 | 14 | 35 | 478 | 3 | 389 | 3.63e-88 | 278 |
Msa0848440 | AT2G30250.1 | 49.383 | 81 | 38 | 2 | 226 | 303 | 312 | 392 | 5.98e-16 | 80.5 |
Msa0848440 | AT1G13960.1 | 41.860 | 430 | 173 | 10 | 60 | 476 | 103 | 468 | 2.33e-85 | 275 |
Msa0848440 | AT4G26640.5 | 54.440 | 259 | 99 | 5 | 234 | 486 | 29 | 274 | 2.44e-85 | 271 |
Msa0848440 | AT4G26640.6 | 54.440 | 259 | 99 | 5 | 234 | 486 | 29 | 274 | 2.44e-85 | 271 |
Msa0848440 | AT4G26640.4 | 54.440 | 259 | 99 | 5 | 234 | 486 | 29 | 274 | 2.44e-85 | 271 |
Msa0848440 | AT4G26640.3 | 54.440 | 259 | 99 | 5 | 234 | 486 | 29 | 274 | 2.44e-85 | 271 |
Msa0848440 | AT4G26640.1 | 54.826 | 259 | 98 | 5 | 234 | 486 | 133 | 378 | 1.10e-84 | 272 |
Msa0848440 | AT5G07100.2 | 57.438 | 242 | 41 | 5 | 239 | 479 | 23 | 203 | 2.16e-82 | 257 |
Msa0848440 | AT5G07100.4 | 57.438 | 242 | 41 | 5 | 239 | 479 | 23 | 203 | 2.16e-82 | 257 |
Msa0848440 | AT5G07100.5 | 57.438 | 242 | 41 | 5 | 239 | 479 | 23 | 203 | 2.16e-82 | 257 |
Msa0848440 | AT5G07100.3 | 57.438 | 242 | 41 | 5 | 239 | 479 | 23 | 203 | 2.16e-82 | 257 |
Msa0848440 | AT5G07100.1 | 56.967 | 244 | 43 | 5 | 237 | 479 | 114 | 296 | 3.04e-82 | 260 |
Msa0848440 | AT5G07100.1 | 35.000 | 300 | 123 | 12 | 57 | 298 | 8 | 293 | 1.41e-28 | 116 |
Msa0848440 | AT5G07100.1 | 44.706 | 85 | 36 | 1 | 403 | 476 | 92 | 176 | 4.75e-16 | 79.7 |
Msa0848440 | AT1G13960.2 | 51.724 | 261 | 102 | 4 | 229 | 476 | 66 | 315 | 5.65e-79 | 253 |
Msa0848440 | AT4G26440.1 | 48.485 | 297 | 109 | 6 | 239 | 495 | 177 | 469 | 7.07e-75 | 249 |
Msa0848440 | AT3G01080.2 | 51.261 | 238 | 78 | 4 | 239 | 476 | 204 | 403 | 1.07e-70 | 235 |
Msa0848440 | AT3G01080.1 | 51.261 | 238 | 78 | 4 | 239 | 476 | 166 | 365 | 1.31e-70 | 234 |
Msa0848440 | AT2G37260.3 | 48.864 | 264 | 102 | 6 | 232 | 475 | 77 | 327 | 1.11e-62 | 210 |
Msa0848440 | AT2G37260.2 | 48.864 | 264 | 102 | 6 | 232 | 475 | 75 | 325 | 1.33e-62 | 210 |
Msa0848440 | AT2G37260.1 | 48.864 | 264 | 102 | 6 | 232 | 475 | 157 | 407 | 7.39e-62 | 211 |
Msa0848440 | AT2G04880.2 | 45.528 | 246 | 117 | 4 | 240 | 479 | 111 | 345 | 1.98e-61 | 210 |
Msa0848440 | AT2G04880.2 | 54.688 | 64 | 28 | 1 | 415 | 478 | 109 | 171 | 2.02e-16 | 82.4 |
Msa0848440 | AT2G04880.2 | 55.882 | 68 | 29 | 1 | 232 | 298 | 275 | 342 | 5.09e-16 | 81.3 |
Msa0848440 | AT2G04880.1 | 43.446 | 267 | 116 | 6 | 240 | 479 | 111 | 369 | 9.14e-61 | 209 |
Msa0848440 | AT2G04880.1 | 54.688 | 64 | 28 | 1 | 415 | 478 | 109 | 171 | 2.28e-16 | 82.4 |
Msa0848440 | AT2G04880.1 | 55.882 | 68 | 29 | 1 | 232 | 298 | 299 | 366 | 5.43e-16 | 81.3 |
Msa0848440 | AT4G30935.1 | 42.194 | 237 | 123 | 5 | 241 | 477 | 169 | 391 | 2.44e-48 | 175 |
Msa0848440 | AT4G30935.1 | 50.000 | 70 | 34 | 1 | 241 | 309 | 332 | 401 | 2.42e-15 | 79.3 |
Msa0848440 | AT4G12020.5 | 47.143 | 210 | 104 | 4 | 229 | 437 | 391 | 594 | 1.70e-47 | 179 |
Msa0848440 | AT4G12020.5 | 48.529 | 68 | 34 | 1 | 416 | 483 | 400 | 466 | 4.28e-12 | 70.1 |
Msa0848440 | AT5G56270.1 | 78.431 | 102 | 20 | 1 | 378 | 479 | 450 | 549 | 4.33e-47 | 176 |
Msa0848440 | AT5G56270.1 | 39.381 | 226 | 122 | 5 | 87 | 303 | 117 | 336 | 4.12e-32 | 132 |
Msa0848440 | AT5G56270.1 | 51.282 | 78 | 35 | 2 | 224 | 298 | 469 | 546 | 1.32e-15 | 80.9 |
Msa0848440 | AT5G56270.1 | 60.000 | 60 | 23 | 1 | 417 | 476 | 273 | 331 | 1.55e-15 | 80.5 |
Msa0848440 | AT4G12020.6 | 47.143 | 210 | 104 | 4 | 229 | 437 | 458 | 661 | 1.58e-45 | 174 |
Msa0848440 | AT4G12020.6 | 50.820 | 61 | 29 | 1 | 416 | 476 | 467 | 526 | 7.38e-12 | 69.3 |
Msa0848440 | AT4G12020.8 | 47.143 | 210 | 104 | 4 | 229 | 437 | 458 | 661 | 1.58e-45 | 174 |
Msa0848440 | AT4G12020.8 | 50.820 | 61 | 29 | 1 | 416 | 476 | 467 | 526 | 7.38e-12 | 69.3 |
Msa0848440 | AT4G12020.1 | 47.143 | 210 | 104 | 4 | 229 | 437 | 458 | 661 | 1.80e-45 | 173 |
Msa0848440 | AT4G12020.1 | 50.820 | 61 | 29 | 1 | 416 | 476 | 467 | 526 | 7.15e-12 | 69.3 |
Msa0848440 | AT4G12020.9 | 47.143 | 210 | 104 | 4 | 229 | 437 | 458 | 661 | 1.80e-45 | 173 |
Msa0848440 | AT4G12020.9 | 50.820 | 61 | 29 | 1 | 416 | 476 | 467 | 526 | 7.15e-12 | 69.3 |
Msa0848440 | AT4G12020.3 | 47.143 | 210 | 104 | 4 | 229 | 437 | 458 | 661 | 1.81e-45 | 173 |
Msa0848440 | AT4G12020.3 | 50.820 | 61 | 29 | 1 | 416 | 476 | 467 | 526 | 7.65e-12 | 69.3 |
Msa0848440 | AT4G12020.7 | 47.143 | 210 | 104 | 4 | 229 | 437 | 458 | 661 | 1.86e-45 | 173 |
Msa0848440 | AT4G12020.7 | 50.820 | 61 | 29 | 1 | 416 | 476 | 467 | 526 | 7.33e-12 | 69.3 |
Msa0848440 | AT4G12020.10 | 47.143 | 210 | 104 | 4 | 229 | 437 | 458 | 661 | 1.89e-45 | 173 |
Msa0848440 | AT4G12020.10 | 50.820 | 61 | 29 | 1 | 416 | 476 | 467 | 526 | 7.58e-12 | 69.3 |
Msa0848440 | AT4G12020.2 | 47.143 | 210 | 104 | 4 | 229 | 437 | 458 | 661 | 2.01e-45 | 173 |
Msa0848440 | AT4G12020.2 | 50.820 | 61 | 29 | 1 | 416 | 476 | 467 | 526 | 8.06e-12 | 69.3 |
Msa0848440 | AT4G12020.4 | 47.143 | 210 | 104 | 4 | 229 | 437 | 458 | 661 | 2.04e-45 | 173 |
Msa0848440 | AT4G12020.4 | 50.820 | 61 | 29 | 1 | 416 | 476 | 467 | 526 | 8.06e-12 | 69.3 |
Msa0848440 | AT4G12020.11 | 47.143 | 210 | 104 | 4 | 229 | 437 | 458 | 661 | 3.59e-45 | 172 |
Msa0848440 | AT4G12020.11 | 50.820 | 61 | 29 | 1 | 416 | 476 | 467 | 526 | 9.24e-12 | 68.9 |
Msa0848440 | AT2G44745.1 | 60.215 | 93 | 36 | 1 | 382 | 473 | 109 | 201 | 1.01e-33 | 128 |
Msa0848440 | AT2G44745.1 | 58.621 | 58 | 23 | 1 | 240 | 296 | 145 | 202 | 1.57e-15 | 76.3 |
Msa0848440 | AT4G39410.1 | 64.474 | 76 | 27 | 0 | 398 | 473 | 204 | 279 | 3.83e-28 | 115 |
Msa0848440 | AT4G39410.1 | 45.946 | 74 | 37 | 2 | 226 | 296 | 207 | 280 | 1.64e-13 | 72.0 |
Msa0848440 | AT1G55600.1 | 60.241 | 83 | 33 | 0 | 396 | 478 | 286 | 368 | 7.80e-28 | 117 |
Msa0848440 | AT1G55600.1 | 55.932 | 59 | 25 | 1 | 241 | 298 | 308 | 366 | 3.41e-14 | 75.9 |
Msa0848440 | AT1G29860.1 | 51.376 | 109 | 42 | 2 | 384 | 481 | 93 | 201 | 1.03e-26 | 110 |
Msa0848440 | AT1G29860.1 | 49.333 | 75 | 36 | 2 | 240 | 313 | 136 | 209 | 5.85e-15 | 76.3 |
Msa0848440 | AT4G18170.1 | 63.158 | 76 | 28 | 0 | 401 | 476 | 156 | 231 | 1.74e-26 | 110 |
Msa0848440 | AT4G18170.1 | 38.571 | 140 | 83 | 3 | 240 | 377 | 172 | 310 | 1.88e-14 | 75.1 |
Msa0848440 | AT3G01080.3 | 70.312 | 64 | 19 | 0 | 239 | 302 | 204 | 267 | 2.79e-26 | 110 |
Msa0848440 | AT3G01080.3 | 59.091 | 66 | 26 | 1 | 417 | 482 | 205 | 269 | 8.17e-18 | 85.5 |
Msa0848440 | AT1G69310.4 | 60.256 | 78 | 31 | 0 | 396 | 473 | 126 | 203 | 5.86e-26 | 108 |
Msa0848440 | AT1G69310.4 | 54.386 | 57 | 25 | 1 | 240 | 295 | 147 | 203 | 1.42e-12 | 68.9 |
Msa0848440 | AT1G69310.2 | 60.256 | 78 | 31 | 0 | 396 | 473 | 126 | 203 | 5.86e-26 | 108 |
Msa0848440 | AT1G69310.2 | 54.386 | 57 | 25 | 1 | 240 | 295 | 147 | 203 | 1.42e-12 | 68.9 |
Msa0848440 | AT1G69310.1 | 60.256 | 78 | 31 | 0 | 396 | 473 | 126 | 203 | 5.86e-26 | 108 |
Msa0848440 | AT1G69310.1 | 54.386 | 57 | 25 | 1 | 240 | 295 | 147 | 203 | 1.42e-12 | 68.9 |
Msa0848440 | AT1G64000.1 | 57.692 | 78 | 33 | 0 | 396 | 473 | 93 | 170 | 1.40e-25 | 104 |
Msa0848440 | AT1G64000.1 | 56.140 | 57 | 24 | 1 | 240 | 295 | 114 | 170 | 5.18e-15 | 74.3 |
Msa0848440 | AT5G41570.1 | 59.211 | 76 | 31 | 0 | 398 | 473 | 79 | 154 | 1.58e-25 | 103 |
Msa0848440 | AT5G41570.1 | 56.140 | 57 | 24 | 1 | 240 | 295 | 98 | 154 | 1.14e-14 | 72.8 |
Msa0848440 | AT5G13080.1 | 59.722 | 72 | 29 | 0 | 404 | 475 | 54 | 125 | 7.00e-25 | 101 |
Msa0848440 | AT5G13080.1 | 54.386 | 57 | 25 | 1 | 240 | 295 | 67 | 123 | 2.77e-15 | 73.6 |
Msa0848440 | AT5G26170.1 | 58.571 | 70 | 29 | 0 | 404 | 473 | 100 | 169 | 9.19e-25 | 101 |
Msa0848440 | AT5G26170.1 | 53.448 | 58 | 26 | 1 | 240 | 296 | 113 | 170 | 1.27e-14 | 72.8 |
Msa0848440 | AT5G49520.1 | 61.728 | 81 | 30 | 1 | 401 | 480 | 205 | 285 | 9.72e-25 | 107 |
Msa0848440 | AT5G49520.1 | 53.125 | 64 | 29 | 1 | 240 | 302 | 221 | 284 | 6.08e-14 | 74.3 |
Msa0848440 | AT5G46350.1 | 52.688 | 93 | 44 | 0 | 403 | 495 | 169 | 261 | 1.43e-24 | 105 |
Msa0848440 | AT5G46350.1 | 50.000 | 72 | 35 | 1 | 232 | 302 | 175 | 246 | 3.14e-13 | 71.6 |
Msa0848440 | AT2G46130.1 | 53.571 | 84 | 39 | 0 | 390 | 473 | 3 | 86 | 2.39e-24 | 98.2 |
Msa0848440 | AT2G46130.1 | 59.649 | 57 | 22 | 1 | 240 | 295 | 30 | 86 | 6.72e-16 | 74.3 |
Msa0848440 | AT2G47260.1 | 59.211 | 76 | 31 | 0 | 401 | 476 | 158 | 233 | 3.18e-24 | 104 |
Msa0848440 | AT2G47260.1 | 53.125 | 64 | 29 | 1 | 240 | 302 | 174 | 237 | 3.61e-14 | 74.3 |
Msa0848440 | AT1G62300.1 | 42.657 | 143 | 68 | 5 | 348 | 476 | 230 | 372 | 3.52e-24 | 107 |
Msa0848440 | AT1G62300.1 | 50.000 | 60 | 28 | 2 | 241 | 298 | 313 | 372 | 9.18e-12 | 68.2 |
Msa0848440 | AT4G04450.2 | 52.809 | 89 | 41 | 1 | 391 | 478 | 172 | 260 | 5.95e-24 | 105 |
Msa0848440 | AT4G04450.2 | 43.836 | 73 | 39 | 2 | 241 | 311 | 199 | 271 | 2.71e-12 | 69.3 |
Msa0848440 | AT3G01970.1 | 62.500 | 72 | 27 | 0 | 404 | 475 | 52 | 123 | 6.71e-24 | 98.2 |
Msa0848440 | AT3G01970.1 | 57.627 | 59 | 22 | 2 | 240 | 296 | 65 | 122 | 3.37e-13 | 67.8 |
Msa0848440 | AT5G15130.2 | 53.846 | 78 | 35 | 1 | 400 | 476 | 168 | 245 | 1.03e-23 | 105 |
Msa0848440 | AT5G15130.2 | 44.595 | 74 | 39 | 2 | 240 | 311 | 185 | 258 | 2.14e-12 | 70.1 |
Msa0848440 | AT5G15130.1 | 53.846 | 78 | 35 | 1 | 400 | 476 | 210 | 287 | 1.30e-23 | 105 |
Msa0848440 | AT5G15130.1 | 44.595 | 74 | 39 | 2 | 240 | 311 | 227 | 300 | 2.10e-12 | 70.1 |
Msa0848440 | AT5G64810.1 | 57.746 | 71 | 30 | 0 | 404 | 474 | 97 | 167 | 1.40e-23 | 99.0 |
Msa0848440 | AT5G64810.1 | 50.877 | 57 | 27 | 1 | 240 | 295 | 110 | 166 | 1.43e-12 | 67.4 |
Msa0848440 | AT4G04450.1 | 52.809 | 89 | 41 | 1 | 391 | 478 | 266 | 354 | 3.00e-23 | 103 |
Msa0848440 | AT4G04450.1 | 43.836 | 73 | 39 | 2 | 241 | 311 | 293 | 365 | 4.25e-12 | 69.3 |
Msa0848440 | AT4G22070.4 | 51.724 | 87 | 41 | 1 | 391 | 476 | 271 | 357 | 8.59e-23 | 102 |
Msa0848440 | AT4G22070.4 | 50.000 | 60 | 28 | 2 | 241 | 298 | 298 | 357 | 7.85e-12 | 68.6 |
Msa0848440 | AT4G22070.3 | 51.724 | 87 | 41 | 1 | 391 | 476 | 271 | 357 | 8.59e-23 | 102 |
Msa0848440 | AT4G22070.3 | 50.000 | 60 | 28 | 2 | 241 | 298 | 298 | 357 | 7.85e-12 | 68.6 |
Msa0848440 | AT4G22070.2 | 51.724 | 87 | 41 | 1 | 391 | 476 | 271 | 357 | 8.59e-23 | 102 |
Msa0848440 | AT4G22070.2 | 50.000 | 60 | 28 | 2 | 241 | 298 | 298 | 357 | 7.85e-12 | 68.6 |
Msa0848440 | AT4G22070.1 | 51.724 | 87 | 41 | 1 | 391 | 476 | 271 | 357 | 8.59e-23 | 102 |
Msa0848440 | AT4G22070.1 | 50.000 | 60 | 28 | 2 | 241 | 298 | 298 | 357 | 7.85e-12 | 68.6 |
Msa0848440 | AT1G68150.1 | 53.165 | 79 | 36 | 1 | 401 | 478 | 219 | 297 | 1.73e-22 | 100 |
Msa0848440 | AT1G68150.1 | 53.333 | 60 | 26 | 2 | 241 | 298 | 236 | 295 | 2.08e-13 | 72.4 |
Msa0848440 | AT1G18860.1 | 52.564 | 78 | 36 | 1 | 400 | 476 | 222 | 299 | 1.32e-21 | 99.0 |
Msa0848440 | AT1G18860.1 | 50.820 | 61 | 28 | 2 | 240 | 298 | 239 | 299 | 2.12e-11 | 67.0 |
Msa0848440 | AT1G69310.3 | 56.410 | 78 | 30 | 1 | 396 | 473 | 126 | 199 | 2.70e-21 | 94.7 |
Msa0848440 | AT3G62340.1 | 47.059 | 102 | 44 | 1 | 401 | 502 | 102 | 193 | 8.98e-21 | 93.2 |
Msa0848440 | AT3G62340.1 | 50.000 | 74 | 35 | 2 | 240 | 311 | 118 | 191 | 2.30e-13 | 71.2 |
Msa0848440 | AT4G01720.1 | 54.545 | 77 | 34 | 1 | 401 | 476 | 223 | 299 | 1.09e-20 | 95.9 |
Msa0848440 | AT4G01720.1 | 37.037 | 108 | 60 | 4 | 199 | 298 | 192 | 299 | 1.31e-11 | 67.4 |
Msa0848440 | AT2G46130.2 | 50.000 | 84 | 38 | 1 | 390 | 473 | 3 | 82 | 9.24e-20 | 85.1 |
Msa0848440 | AT2G46130.2 | 54.386 | 57 | 21 | 2 | 240 | 295 | 30 | 82 | 2.16e-11 | 61.2 |
Msa0848440 | AT4G31550.1 | 55.128 | 78 | 31 | 2 | 398 | 474 | 230 | 304 | 1.22e-19 | 90.9 |
Msa0848440 | AT4G31550.1 | 49.333 | 75 | 36 | 2 | 241 | 313 | 247 | 321 | 6.40e-14 | 73.6 |
Msa0848440 | AT4G31550.2 | 55.128 | 78 | 31 | 2 | 398 | 474 | 229 | 303 | 1.26e-19 | 90.5 |
Msa0848440 | AT4G31550.2 | 49.333 | 75 | 36 | 2 | 241 | 313 | 246 | 320 | 6.22e-14 | 73.6 |
Msa0848440 | AT2G21900.1 | 50.000 | 76 | 35 | 1 | 406 | 478 | 95 | 170 | 1.39e-19 | 87.8 |
Msa0848440 | AT2G21900.1 | 46.269 | 67 | 35 | 1 | 240 | 305 | 109 | 175 | 8.20e-13 | 68.2 |
Msa0848440 | AT2G23320.1 | 50.633 | 79 | 35 | 2 | 398 | 475 | 224 | 299 | 1.62e-19 | 90.1 |
Msa0848440 | AT2G23320.1 | 53.448 | 58 | 25 | 2 | 241 | 296 | 241 | 298 | 1.40e-12 | 69.3 |
Msa0848440 | AT2G24570.1 | 57.143 | 77 | 29 | 2 | 398 | 473 | 227 | 300 | 1.68e-19 | 90.1 |
Msa0848440 | AT2G24570.1 | 54.386 | 57 | 24 | 2 | 241 | 295 | 244 | 300 | 4.28e-13 | 70.9 |
Msa0848440 | AT4G24240.1 | 52.500 | 80 | 37 | 1 | 397 | 475 | 261 | 340 | 1.74e-19 | 90.9 |
Msa0848440 | AT4G24240.1 | 53.448 | 58 | 25 | 2 | 241 | 296 | 282 | 339 | 3.00e-13 | 72.0 |
Msa0848440 | AT4G31800.2 | 50.704 | 71 | 33 | 2 | 410 | 478 | 103 | 173 | 1.43e-18 | 85.9 |
Msa0848440 | AT4G31800.2 | 38.776 | 98 | 55 | 4 | 231 | 324 | 100 | 196 | 1.50e-14 | 74.3 |
Msa0848440 | AT1G80840.1 | 51.562 | 64 | 30 | 1 | 415 | 477 | 144 | 207 | 2.34e-18 | 86.7 |
Msa0848440 | AT1G80840.1 | 53.333 | 60 | 26 | 2 | 241 | 298 | 147 | 206 | 3.20e-13 | 71.2 |
Msa0848440 | AT4G31800.1 | 50.704 | 71 | 33 | 2 | 410 | 478 | 168 | 238 | 2.87e-18 | 86.3 |
Msa0848440 | AT4G31800.1 | 38.776 | 98 | 55 | 4 | 231 | 324 | 165 | 261 | 2.67e-14 | 74.7 |
Msa0848440 | AT5G28650.1 | 50.649 | 77 | 37 | 1 | 398 | 473 | 243 | 319 | 1.24e-17 | 84.7 |
Msa0848440 | AT5G28650.1 | 54.237 | 59 | 25 | 2 | 241 | 297 | 263 | 321 | 6.45e-13 | 70.5 |
Msa0848440 | AT5G43290.1 | 43.434 | 99 | 38 | 2 | 393 | 473 | 72 | 170 | 1.43e-17 | 83.6 |
Msa0848440 | AT5G43290.1 | 63.793 | 58 | 20 | 1 | 239 | 295 | 113 | 170 | 5.20e-16 | 79.0 |
Msa0848440 | AT2G25000.2 | 50.000 | 64 | 31 | 1 | 416 | 478 | 102 | 165 | 1.55e-17 | 82.4 |
Msa0848440 | AT2G25000.2 | 47.619 | 63 | 31 | 2 | 241 | 301 | 104 | 166 | 9.07e-13 | 68.6 |
Msa0848440 | AT2G25000.4 | 50.000 | 64 | 31 | 1 | 416 | 478 | 102 | 165 | 1.55e-17 | 82.4 |
Msa0848440 | AT2G25000.4 | 47.619 | 63 | 31 | 2 | 241 | 301 | 104 | 166 | 9.07e-13 | 68.6 |
Msa0848440 | AT2G25000.3 | 50.000 | 64 | 31 | 1 | 416 | 478 | 124 | 187 | 3.47e-17 | 82.0 |
Msa0848440 | AT2G25000.3 | 47.619 | 63 | 31 | 2 | 241 | 301 | 126 | 188 | 1.27e-12 | 68.6 |
Msa0848440 | AT3G04670.1 | 50.649 | 77 | 37 | 1 | 398 | 473 | 243 | 319 | 3.78e-17 | 83.6 |
Msa0848440 | AT3G04670.1 | 52.542 | 59 | 26 | 2 | 241 | 297 | 263 | 321 | 8.63e-13 | 70.1 |
Msa0848440 | AT2G25000.1 | 50.000 | 64 | 31 | 1 | 416 | 478 | 145 | 208 | 4.85e-17 | 82.0 |
Msa0848440 | AT2G25000.1 | 47.619 | 63 | 31 | 2 | 241 | 301 | 147 | 209 | 1.72e-12 | 68.6 |
Msa0848440 | AT2G30590.1 | 51.948 | 77 | 36 | 1 | 398 | 473 | 294 | 370 | 6.52e-17 | 83.2 |
Msa0848440 | AT2G30590.1 | 54.237 | 59 | 25 | 2 | 241 | 297 | 314 | 372 | 3.78e-12 | 68.6 |
Msa0848440 | AT1G69810.2 | 46.835 | 79 | 40 | 2 | 400 | 476 | 128 | 206 | 7.41e-17 | 82.4 |
Msa0848440 | AT1G69810.1 | 46.835 | 79 | 40 | 2 | 400 | 476 | 186 | 264 | 9.24e-17 | 82.8 |
Msa0848440 | AT4G23550.1 | 44.156 | 77 | 42 | 1 | 406 | 481 | 129 | 205 | 5.09e-15 | 76.6 |
Msa0848440 | AT5G52830.1 | 40.404 | 99 | 56 | 3 | 398 | 494 | 147 | 244 | 9.88e-14 | 73.2 |
Msa0848440 | AT5G52830.1 | 44.048 | 84 | 43 | 3 | 239 | 320 | 164 | 245 | 2.40e-12 | 68.9 |
Msa0848440 | AT1G29280.1 | 50.000 | 60 | 29 | 1 | 418 | 476 | 75 | 134 | 1.15e-13 | 71.6 |
Msa0848440 | AT4G01250.1 | 50.769 | 65 | 31 | 1 | 418 | 481 | 129 | 193 | 1.35e-13 | 72.4 |
Msa0848440 | AT5G24110.1 | 38.182 | 110 | 51 | 3 | 231 | 336 | 104 | 200 | 2.95e-13 | 71.2 |
Msa0848440 | AT3G58710.1 | 48.387 | 62 | 31 | 1 | 418 | 478 | 72 | 133 | 1.26e-12 | 68.9 |
Msa0848440 | AT3G58710.2 | 48.387 | 62 | 31 | 1 | 418 | 478 | 71 | 132 | 1.27e-12 | 68.9 |
Msa0848440 | AT2G40740.1 | 36.283 | 113 | 52 | 4 | 364 | 472 | 135 | 231 | 1.28e-12 | 69.3 |
Msa0848440 | AT2G40740.1 | 33.884 | 121 | 66 | 6 | 240 | 355 | 173 | 284 | 6.39e-12 | 67.0 |
Msa0848440 | AT2G40740.3 | 36.607 | 112 | 51 | 4 | 364 | 471 | 144 | 239 | 1.64e-12 | 68.9 |
Msa0848440 | AT2G40740.3 | 33.884 | 121 | 66 | 6 | 240 | 355 | 182 | 293 | 8.87e-12 | 66.6 |
Msa0848440 | AT2G34830.2 | 37.624 | 101 | 54 | 2 | 380 | 479 | 195 | 287 | 2.88e-12 | 69.3 |
Msa0848440 | AT2G34830.1 | 37.624 | 101 | 54 | 2 | 380 | 479 | 186 | 278 | 2.91e-12 | 69.3 |
Msa0848440 | AT1G30650.1 | 37.624 | 101 | 54 | 2 | 380 | 479 | 188 | 280 | 4.38e-12 | 68.9 |
Msa0848440 | AT4G23810.1 | 45.588 | 68 | 33 | 2 | 231 | 294 | 149 | 216 | 5.03e-11 | 64.7 |
Msa0848440 | AT4G11070.2 | 45.588 | 68 | 31 | 3 | 231 | 293 | 100 | 166 | 5.68e-11 | 63.9 |
Msa0848440 | AT2G46400.1 | 42.308 | 78 | 38 | 3 | 240 | 310 | 104 | 181 | 6.22e-11 | 64.3 |
Msa0848440 | AT4G11070.1 | 45.588 | 68 | 31 | 3 | 231 | 293 | 132 | 198 | 6.82e-11 | 64.3 |
Msa0848440 | AT5G45050.4 | 46.154 | 65 | 34 | 1 | 418 | 481 | 1042 | 1106 | 6.98e-11 | 65.9 |
Msa0848440 | AT5G45050.2 | 46.154 | 65 | 34 | 1 | 418 | 481 | 1153 | 1217 | 7.64e-11 | 65.9 |
Msa0848440 | AT5G45050.1 | 46.154 | 65 | 34 | 1 | 418 | 481 | 1181 | 1245 | 7.68e-11 | 65.9 |
Find 161 sgRNAs with CRISPR-Local
Find 244 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACATGGAAGGTTGGAAATTT+TGG | 0.123460 | 5_4:-32933929 | Msa0848440:three_prime_UTR |
AGATCTTATGATTTGAATTA+TGG | 0.156555 | 5_4:+32933572 | None:intergenic |
TTGCTGTGGTTGCTGGTAAC+TGG | 0.245732 | 5_4:+32935853 | None:intergenic |
AGTTACTGAGATAGTTTATA+AGG | 0.282812 | 5_4:-32935672 | Msa0848440:CDS |
ATAATTTCATACCTTGGATT+TGG | 0.285438 | 5_4:+32934963 | None:intergenic |
TCAAGGAACATGTCATCTTT+AGG | 0.289714 | 5_4:+32933993 | None:intergenic |
GGATACAATTGGCGAAAATA+TGG | 0.295221 | 5_4:-32935797 | Msa0848440:CDS |
CAACAACAAATGGCTGAAAA+TGG | 0.301577 | 5_4:-32934041 | Msa0848440:CDS |
ATCATCTGATCTTCGGCTTA+AGG | 0.306175 | 5_4:+32935820 | None:intergenic |
GAGTTGGTTGCTGTGGTTGC+TGG | 0.312817 | 5_4:+32935846 | None:intergenic |
TTCTTCTTAGTAGGACAGTT+AGG | 0.312859 | 5_4:+32935719 | None:intergenic |
CTGCAGGGCCAAGGAAATTA+TGG | 0.315509 | 5_4:-32934122 | Msa0848440:CDS |
ATTTCATTGATTGGATTAAC+AGG | 0.319458 | 5_4:+32935575 | None:intergenic |
TCTCTCACAGTTCTACTTGC+AGG | 0.324754 | 5_4:+32935080 | None:intergenic |
AACGTGCCTCGCATGATTTA+AGG | 0.326299 | 5_4:-32934343 | Msa0848440:CDS |
AAGTAAGAAGAAGGAGAAAC+AGG | 0.327987 | 5_4:+32937303 | None:intergenic |
CATTAGTTTGTGGCTTCTCT+TGG | 0.329118 | 5_4:-32933728 | Msa0848440:three_prime_UTR |
CAGCAGCAGGCCCTTGTTGT+TGG | 0.337044 | 5_4:+32936537 | None:intergenic |
GCCATGGCTGCAGCATTGTT+TGG | 0.339692 | 5_4:+32934215 | None:intergenic |
GGCTTCTCTTGGCTTTAGTT+AGG | 0.341641 | 5_4:-32933717 | Msa0848440:three_prime_UTR |
CTGACTCTCAAGAGGCCTTA+TGG | 0.347415 | 5_4:+32934193 | None:intergenic |
GGTTACAGATGGAGGAAATA+TGG | 0.355775 | 5_4:-32935008 | Msa0848440:CDS |
CTGCTCAAAGCAACTACAAT+TGG | 0.363470 | 5_4:-32936616 | Msa0848440:CDS |
TGATCATGGATTTCATTGAT+TGG | 0.366627 | 5_4:+32935566 | None:intergenic |
TGGATGTAGTTAACCGCATT+TGG | 0.369998 | 5_4:-32933659 | Msa0848440:three_prime_UTR |
AGCAGCAGGCCCTTGTTGTT+GGG | 0.372679 | 5_4:+32936538 | None:intergenic |
GTTTCATGTTGTCAAAGGTT+TGG | 0.373131 | 5_4:+32933518 | None:intergenic |
TGCTTCCTCACTGGACAGTT+AGG | 0.375493 | 5_4:+32934371 | None:intergenic |
TTAATCATTTGTGGGTTGAT+TGG | 0.376583 | 5_4:-32933679 | Msa0848440:three_prime_UTR |
TTGGAAGAGTTAAGCATAAC+AGG | 0.378565 | 5_4:+32937237 | None:intergenic |
GTGCATTTGTAGTAACTTCT+CGG | 0.379548 | 5_4:+32935746 | None:intergenic |
TTTGGATTTGAAGGGTTGTT+TGG | 0.379730 | 5_4:+32934233 | None:intergenic |
TTGGCATGTGCGATCAAGAT+TGG | 0.381138 | 5_4:-32933640 | Msa0848440:three_prime_UTR |
AAATCCATTGTTGGTGTTGT+TGG | 0.383862 | 5_4:+32935889 | None:intergenic |
GCAGCATTGTTTGGATTTGA+AGG | 0.390150 | 5_4:+32934224 | None:intergenic |
GAGAATTCTTCAATATCAAT+TGG | 0.394609 | 5_4:-32935494 | Msa0848440:CDS |
ATATGGACAGAAAGTTGTTA+AGG | 0.405032 | 5_4:-32934991 | Msa0848440:CDS |
TCTTACTTTGCTATTCCTCC+TGG | 0.408483 | 5_4:-32937288 | Msa0848440:CDS |
CATAAGAAAGAGAAGAGAAA+AGG | 0.414080 | 5_4:+32937548 | None:intergenic |
CTTGGCCCTGCAGCATCTGA+AGG | 0.418045 | 5_4:+32934132 | None:intergenic |
CTCTCAACTTTCTTCTTAGT+AGG | 0.422831 | 5_4:+32935710 | None:intergenic |
TTCAGCACAGCAAAGATTCA+AGG | 0.431997 | 5_4:+32933976 | None:intergenic |
TTGAGAATCCATAATTTCCT+TGG | 0.432499 | 5_4:+32934114 | None:intergenic |
TATACAGGATGGGTTTGGTT+TGG | 0.435210 | 5_4:-32933807 | Msa0848440:three_prime_UTR |
TGTATCCATCATCTGATCTT+CGG | 0.437503 | 5_4:+32935813 | None:intergenic |
CTTGTAAAGTTTATACAGGA+TGG | 0.438119 | 5_4:-32933818 | Msa0848440:three_prime_UTR |
ATATGGACAAAAGCAAGTTA+AGG | 0.439389 | 5_4:-32935780 | Msa0848440:CDS |
GCAGCAAAAGCACCAGTTGT+AGG | 0.442196 | 5_4:+32936635 | None:intergenic |
TTAGTAGATACATGGAAGGT+TGG | 0.446487 | 5_4:-32933938 | Msa0848440:three_prime_UTR |
GGTGACAAAGGCAAAGAAGG+AGG | 0.447096 | 5_4:+32937330 | None:intergenic |
GGAGGTGACAAAGGCAAAGA+AGG | 0.447183 | 5_4:+32937327 | None:intergenic |
ATGCTGCAGCCATGGCCATA+AGG | 0.448389 | 5_4:-32934208 | Msa0848440:CDS |
GGAGAATCAAGAAGGTCAGC+AGG | 0.448810 | 5_4:+32937258 | None:intergenic |
CTCAAGGTTTGATAATCAAA+TGG | 0.448868 | 5_4:-32934096 | Msa0848440:CDS |
TGCTGTTGTTGATTCATGTA+AGG | 0.449558 | 5_4:+32934071 | None:intergenic |
ACGTGCCTCGCATGATTTAA+GGG | 0.458975 | 5_4:-32934342 | Msa0848440:CDS |
CAGATGATAATAACAATTCA+AGG | 0.459469 | 5_4:-32937380 | Msa0848440:CDS |
GCTTCATATTTAATCATTTG+TGG | 0.459514 | 5_4:-32933688 | Msa0848440:three_prime_UTR |
TATGGACAAAAGCAAGTTAA+GGG | 0.462416 | 5_4:-32935779 | Msa0848440:CDS |
CACCACCTGATCTACTCCTT+TGG | 0.463806 | 5_4:+32935441 | None:intergenic |
GTTACTGAGATAGTTTATAA+GGG | 0.464337 | 5_4:-32935671 | Msa0848440:CDS |
CTTCATATTTAATCATTTGT+GGG | 0.465775 | 5_4:-32933687 | Msa0848440:three_prime_UTR |
GAAAGTTGAGAGATCAATTG+AGG | 0.467515 | 5_4:-32935699 | Msa0848440:CDS |
AAGTTTATACAGGATGGGTT+TGG | 0.467623 | 5_4:-32933812 | Msa0848440:three_prime_UTR |
GAGAAAGTTGTTGACATGAA+AGG | 0.468026 | 5_4:+32937435 | None:intergenic |
GTTCCCGCTGCTCGTGGAAG+TGG | 0.469705 | 5_4:-32934281 | Msa0848440:CDS |
GGAATAGCAAAGTAAGAAGA+AGG | 0.472115 | 5_4:+32937294 | None:intergenic |
TTTGAAGGGTTGTTTGGCAT+TGG | 0.472870 | 5_4:+32934239 | None:intergenic |
AGAAAGTTGTTGACATGAAA+GGG | 0.475176 | 5_4:+32937436 | None:intergenic |
ATTGATATTGAAGAATTCTC+AGG | 0.475349 | 5_4:+32935497 | None:intergenic |
TCTTCTTAGTAGGACAGTTA+GGG | 0.476077 | 5_4:+32935720 | None:intergenic |
GCATTGGTCTGTTCACAGAA+TGG | 0.477391 | 5_4:+32934255 | None:intergenic |
TCTCACCAAAGGAGTAGATC+AGG | 0.482361 | 5_4:-32935446 | Msa0848440:CDS |
AACAAGTGACATTGATATCC+TGG | 0.483451 | 5_4:-32935036 | Msa0848440:CDS |
CGTTCGACATGCTTCCTCAC+TGG | 0.483827 | 5_4:+32934362 | None:intergenic |
CTTCGGCTTAAGGTTTGAGT+TGG | 0.484985 | 5_4:+32935830 | None:intergenic |
TTTCAATCATCAACTGTTGG+TGG | 0.485570 | 5_4:-32936494 | Msa0848440:CDS |
TATGGACAGAAAGTTGTTAA+GGG | 0.490445 | 5_4:-32934990 | Msa0848440:CDS |
GCAGCAGCAACAACAACAAA+TGG | 0.490866 | 5_4:-32934051 | Msa0848440:CDS |
GATCAGATGATGGATACAAT+TGG | 0.492867 | 5_4:-32935808 | Msa0848440:CDS |
ATTTGGTTTCATGTTGTCAA+AGG | 0.496915 | 5_4:+32933513 | None:intergenic |
AGGAGTAGATCAGGTGGTGC+TGG | 0.501974 | 5_4:-32935437 | Msa0848440:CDS |
TCCAAACAATGCTGCAGCCA+TGG | 0.508008 | 5_4:-32934216 | Msa0848440:CDS |
GTTTGAACACTAGCAATCTC+AGG | 0.510377 | 5_4:+32935911 | None:intergenic |
TGTCCTTGAGGTGCTTGTTG+TGG | 0.510790 | 5_4:+32934167 | None:intergenic |
CTCAAGAGGCCTTATGGCCA+TGG | 0.515208 | 5_4:+32934199 | None:intergenic |
AGGTTCTTCCTTAGCTCTAG+AGG | 0.516687 | 5_4:+32934013 | None:intergenic |
CTTCCACTTCCACGAGCAGC+GGG | 0.517985 | 5_4:+32934278 | None:intergenic |
TCATATGCATCACATGGTAA+TGG | 0.518462 | 5_4:-32935542 | Msa0848440:CDS |
ATAAGAAAGAGAAGAGAAAA+GGG | 0.518787 | 5_4:+32937549 | None:intergenic |
ATTCAACCTTCAGATGCTGC+AGG | 0.519985 | 5_4:-32934138 | Msa0848440:CDS |
CAGCATTGTTTGGATTTGAA+GGG | 0.524122 | 5_4:+32934225 | None:intergenic |
CTTCAGATGCTGCAGGGCCA+AGG | 0.524642 | 5_4:-32934131 | Msa0848440:CDS |
CATGATGTTCCCGCTGCTCG+TGG | 0.525878 | 5_4:-32934287 | Msa0848440:CDS |
ATCACATGGTAATGGACAAA+TGG | 0.525938 | 5_4:-32935534 | Msa0848440:CDS |
TTTGATGTTGAGAAATGGAA+GGG | 0.527284 | 5_4:+32937610 | None:intergenic |
GCTTCCTCACTGGACAGTTA+GGG | 0.528656 | 5_4:+32934372 | None:intergenic |
TTGTAAAGTTTATACAGGAT+GGG | 0.534317 | 5_4:-32933817 | Msa0848440:three_prime_UTR |
GTTGTCTGAACTACAACTCT+AGG | 0.534551 | 5_4:+32935056 | None:intergenic |
AAGGTTTGAGTTGGTTGCTG+TGG | 0.535972 | 5_4:+32935839 | None:intergenic |
TCCATCTGTAACCATCATCC+AGG | 0.539396 | 5_4:+32935018 | None:intergenic |
AAGGAAATTATGGATTCTCA+AGG | 0.541036 | 5_4:-32934112 | Msa0848440:CDS |
AAAGTTGAGAGATCAATTGA+GGG | 0.542158 | 5_4:-32935698 | Msa0848440:CDS |
GGGGAATCAGCAAATGAGAA+AGG | 0.544170 | 5_4:-32936579 | Msa0848440:CDS |
GTCTGATTGAAATCCATTGT+TGG | 0.544770 | 5_4:+32935880 | None:intergenic |
GTGGATGCAGTAACAGCAGC+AGG | 0.546307 | 5_4:+32936524 | None:intergenic |
CCGTCTGTCTTGATCTTGAT+CGG | 0.554098 | 5_4:-32933546 | Msa0848440:three_prime_UTR |
GTGATGCATATGACTGATCA+TGG | 0.555757 | 5_4:+32935552 | None:intergenic |
TGCAGCATCTGAAGGTTGAA+TGG | 0.556763 | 5_4:+32934140 | None:intergenic |
AGGTCAGCAGGGCTTAAACC+AGG | 0.559224 | 5_4:+32937270 | None:intergenic |
GAGTTTCTCCTTGTGCATTG+AGG | 0.560551 | 5_4:+32935629 | None:intergenic |
GTGACAAAGGCAAAGAAGGA+GGG | 0.561545 | 5_4:+32937331 | None:intergenic |
CAAACCAACAACACCAACAA+TGG | 0.565174 | 5_4:-32935893 | Msa0848440:CDS |
TGATGATTGAAAAGTTGTTG+TGG | 0.568622 | 5_4:+32936505 | None:intergenic |
AATTGGATGAACAATTCTGA+GGG | 0.569230 | 5_4:-32936599 | Msa0848440:CDS |
CAATTGGATGAACAATTCTG+AGG | 0.572186 | 5_4:-32936600 | Msa0848440:CDS |
AAAGCACCAGTTGTAGGTGA+TGG | 0.572239 | 5_4:+32936641 | None:intergenic |
TGACAAAGGCAAAGAAGGAG+GGG | 0.573076 | 5_4:+32937332 | None:intergenic |
CACGAGCAGCGGGAACATCA+TGG | 0.574919 | 5_4:+32934288 | None:intergenic |
TCCTGGATGATGGTTACAGA+TGG | 0.575655 | 5_4:-32935019 | Msa0848440:CDS |
TGGTTTCTCCTCTAGAGCTA+AGG | 0.577015 | 5_4:-32934021 | Msa0848440:CDS |
TTAAGCCGAAGATCAGATGA+TGG | 0.580885 | 5_4:-32935818 | Msa0848440:CDS |
AGATGATAATAACAATTCAA+GGG | 0.581933 | 5_4:-32937379 | Msa0848440:CDS |
AGTAAGAAGAAGGAGAAACA+GGG | 0.582152 | 5_4:+32937304 | None:intergenic |
TTGAGCAGAGTTCTCACCAA+AGG | 0.582395 | 5_4:-32935457 | Msa0848440:CDS |
GCTTCCACTTCCACGAGCAG+CGG | 0.584039 | 5_4:+32934277 | None:intergenic |
ATCATCTTCTAATGCTCTCG+TGG | 0.586135 | 5_4:-32935603 | Msa0848440:CDS |
AATTCTTCAATATCAATTGG+AGG | 0.586744 | 5_4:-32935491 | Msa0848440:CDS |
TCATGTAACAGCAACAGCAA+TGG | 0.589008 | 5_4:-32936030 | Msa0848440:intron |
GACATTGATATCCTGGATGA+TGG | 0.594877 | 5_4:-32935029 | Msa0848440:CDS |
TGTGGCCTCTGACTCTCAAG+AGG | 0.595198 | 5_4:+32934185 | None:intergenic |
TAAGAAGAAGGAGAAACAGG+GGG | 0.597289 | 5_4:+32937306 | None:intergenic |
AGGAACCTGAGGCTAAAAGA+TGG | 0.599722 | 5_4:-32935397 | Msa0848440:intron |
CATGTGCGATCAAGATTGGA+CGG | 0.601440 | 5_4:-32933636 | Msa0848440:three_prime_UTR |
AGAAAGAGAAGAGAAAAGGG+TGG | 0.602299 | 5_4:+32937552 | None:intergenic |
GCATAACAGGAGAATCAAGA+AGG | 0.606162 | 5_4:+32937250 | None:intergenic |
TTAAGGGCAATCCAAATCCA+AGG | 0.610722 | 5_4:-32934974 | Msa0848440:intron |
TGGATGATGGTTACAGATGG+AGG | 0.611243 | 5_4:-32935016 | Msa0848440:CDS |
GAGAATCAAGAAGGTCAGCA+GGG | 0.615872 | 5_4:+32937259 | None:intergenic |
TTGATGTTGAGAAATGGAAG+GGG | 0.618038 | 5_4:+32937611 | None:intergenic |
TAAGGCCTCTTGAGAGTCAG+AGG | 0.620807 | 5_4:-32934190 | Msa0848440:CDS |
GGCAGTGATCACAACTTACG+AGG | 0.622530 | 5_4:-32934321 | Msa0848440:CDS |
TTGAATGGTGATTGTCCTTG+AGG | 0.624194 | 5_4:+32934155 | None:intergenic |
TCATCTGAAGAAGCAGCAGA+AGG | 0.624295 | 5_4:+32937396 | None:intergenic |
TGGTGATGAATTTGATGAAG+AGG | 0.626753 | 5_4:-32935417 | Msa0848440:CDS |
TTCAACCTTCAGATGCTGCA+GGG | 0.627195 | 5_4:-32934137 | Msa0848440:CDS |
AGGCCACAACAAGCACCTCA+AGG | 0.634387 | 5_4:-32934170 | Msa0848440:CDS |
ATGCTAAGCCTCAATGCACA+AGG | 0.636500 | 5_4:-32935637 | Msa0848440:CDS |
GATGATAATAACAATTCAAG+GGG | 0.636553 | 5_4:-32937378 | Msa0848440:CDS |
GTAAGAAGAAGGAGAAACAG+GGG | 0.638139 | 5_4:+32937305 | None:intergenic |
CACTGCCCTTAAATCATGCG+AGG | 0.644393 | 5_4:+32934337 | None:intergenic |
CACCAAAGGAGTAGATCAGG+TGG | 0.653889 | 5_4:-32935443 | Msa0848440:CDS |
ATTTGATGAAGAGGAACCTG+AGG | 0.654470 | 5_4:-32935408 | Msa0848440:CDS |
GACAAAGGCAAAGAAGGAGG+GGG | 0.657084 | 5_4:+32937333 | None:intergenic |
GATCAGTCATATGCATCACA+TGG | 0.661879 | 5_4:-32935548 | Msa0848440:CDS |
CCGATCAAGATCAAGACAGA+CGG | 0.665097 | 5_4:+32933546 | None:intergenic |
TTGATCGCACATGCCAAATG+CGG | 0.675232 | 5_4:+32933646 | None:intergenic |
GCAGTGATCACAACTTACGA+GGG | 0.724264 | 5_4:-32934320 | Msa0848440:CDS |
ATTGGATGAACAATTCTGAG+GGG | 0.734397 | 5_4:-32936598 | Msa0848440:CDS |
TCAGCAGGGCTTAAACCAGG+AGG | 0.737654 | 5_4:+32937273 | None:intergenic |
CACACCCTAACTGTCCAGTG+AGG | 0.744836 | 5_4:-32934376 | Msa0848440:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTTATTTTTAATCAATTGA+AGG | - | chr5_4:32934365-32934384 | Msa0848440:CDS | 10.0% |
!!! | TTTTTTTTTGTTTTTGGTTT+TGG | + | chr5_4:32933598-32933617 | None:intergenic | 15.0% |
!!! | GAAGTTTTTTTTTTTGTTTT+TGG | + | chr5_4:32933604-32933623 | None:intergenic | 15.0% |
!!! | TTTATGTTATTTTTTGACAT+GGG | - | chr5_4:32934055-32934074 | Msa0848440:CDS | 15.0% |
!!! | TAAGTTTACATAAAATTTTC+AGG | - | chr5_4:32936038-32936057 | Msa0848440:intron | 15.0% |
!!! | ATTTTTTTTTCATTAGTTTG+TGG | - | chr5_4:32937439-32937458 | Msa0848440:CDS | 15.0% |
!! | ATATAAAGAGAGAGAAAAAT+GGG | + | chr5_4:32933543-32933562 | None:intergenic | 20.0% |
!! | AATATAAAGAGAGAGAAAAA+TGG | + | chr5_4:32933544-32933563 | None:intergenic | 20.0% |
!!! | AAAATTTTGATGTTGAGAAA+TGG | + | chr5_4:32933575-32933594 | None:intergenic | 20.0% |
!! | AGATGATAATAACAATTCAA+GGG | - | chr5_4:32933798-32933817 | Msa0848440:three_prime_UTR | 20.0% |
!! | AAAATGAAAGAAACTAACAT+TGG | + | chr5_4:32933962-32933981 | None:intergenic | 20.0% |
!!! | CTTTATGTTATTTTTTGACA+TGG | - | chr5_4:32934054-32934073 | Msa0848440:CDS | 20.0% |
!!! | TTTTCATCATCTATGTTTTA+TGG | - | chr5_4:32934088-32934107 | Msa0848440:CDS | 20.0% |
!!! | TTTCATCATCTATGTTTTAT+GGG | - | chr5_4:32934089-32934108 | Msa0848440:CDS | 20.0% |
!!! | TTTTTTTGACATATGTTCAA+TGG | - | chr5_4:32934317-32934336 | Msa0848440:CDS | 20.0% |
!! | TTATGTTGTTACTGAATATA+TGG | - | chr5_4:32934471-32934490 | Msa0848440:intron | 20.0% |
!! | TATGTTGTTACTGAATATAT+GGG | - | chr5_4:32934472-32934491 | Msa0848440:intron | 20.0% |
!! | GCAATAAATGCTTAAAAAAT+TGG | + | chr5_4:32934730-32934749 | None:intergenic | 20.0% |
!! | GAGATTAAAAAAATTGAAGT+TGG | - | chr5_4:32934825-32934844 | Msa0848440:intron | 20.0% |
!! | AAAACAAGGAATCATATTAA+TGG | + | chr5_4:32935837-32935856 | None:intergenic | 20.0% |
!! | TTAAGAACATCAATAAAACA+AGG | + | chr5_4:32935851-32935870 | None:intergenic | 20.0% |
!! | GCTGATATATTATTAAATTG+TGG | - | chr5_4:32935965-32935984 | Msa0848440:CDS | 20.0% |
!! | ATATTATTAAATTGTGGTTG+TGG | - | chr5_4:32935971-32935990 | Msa0848440:CDS | 20.0% |
!!! | TGCAATTTAAAACTATATGT+AGG | - | chr5_4:32935996-32936015 | Msa0848440:CDS | 20.0% |
!!! | TATATGTAGGTTTTATTTCA+TGG | - | chr5_4:32936009-32936028 | Msa0848440:CDS | 20.0% |
!!! | AAAATTTTCAGGAAAAATGA+AGG | - | chr5_4:32936049-32936068 | Msa0848440:intron | 20.0% |
!! | AAATATTACTTAGTCAAATG+TGG | - | chr5_4:32936353-32936372 | Msa0848440:intron | 20.0% |
!! | AGAAATAACCAAATTAGAAA+AGG | + | chr5_4:32936502-32936521 | None:intergenic | 20.0% |
!!! | TTTCTAATTTGGTTATTTCT+TGG | - | chr5_4:32936502-32936521 | Msa0848440:CDS | 20.0% |
!!! | GTGTTTAATTTATGATTTGT+AGG | - | chr5_4:32936762-32936781 | Msa0848440:intron | 20.0% |
!!! | TTTCATTTTTAGTAGATACA+TGG | - | chr5_4:32937231-32937250 | Msa0848440:intron | 20.0% |
!! | CAAAAAACAAATGCAATAAA+TGG | + | chr5_4:32937324-32937343 | None:intergenic | 20.0% |
!!! | CATTTATTGCATTTGTTTTT+TGG | - | chr5_4:32937322-32937341 | Msa0848440:CDS | 20.0% |
!!! | TTTTCTTGTAAAGTTTATAC+AGG | - | chr5_4:32937355-32937374 | Msa0848440:CDS | 20.0% |
!! | CTTCATATTTAATCATTTGT+GGG | - | chr5_4:32937490-32937509 | Msa0848440:CDS | 20.0% |
!! | AGATCTTATGATTTGAATTA+TGG | + | chr5_4:32937608-32937627 | None:intergenic | 20.0% |
! | ATAAGAAAGAGAAGAGAAAA+GGG | + | chr5_4:32933631-32933650 | None:intergenic | 25.0% |
! | CAGATGATAATAACAATTCA+AGG | - | chr5_4:32933797-32933816 | Msa0848440:three_prime_UTR | 25.0% |
! | GATGATAATAACAATTCAAG+GGG | - | chr5_4:32933799-32933818 | Msa0848440:three_prime_UTR | 25.0% |
!!! | AGATTGTTCTTTTTTGTGTT+TGG | - | chr5_4:32934206-32934225 | Msa0848440:CDS | 25.0% |
!!! | AAGGAAAGTTTAGACTTTTT+TGG | - | chr5_4:32934271-32934290 | Msa0848440:CDS | 25.0% |
! | TTAAGCATTTATTGCATGTT+TGG | - | chr5_4:32934735-32934754 | Msa0848440:intron | 25.0% |
!!! | CACATTATTTTTGTTGGATT+TGG | + | chr5_4:32935046-32935065 | None:intergenic | 25.0% |
!!! | GTTGATCACATTATTTTTGT+TGG | + | chr5_4:32935052-32935071 | None:intergenic | 25.0% |
!! | ACCTATGTCTTTTATCTTAT+TGG | - | chr5_4:32935079-32935098 | Msa0848440:CDS | 25.0% |
! | ACCAATAAGATAAAAGACAT+AGG | + | chr5_4:32935083-32935102 | None:intergenic | 25.0% |
! | AGTTACTGAGATAGTTTATA+AGG | - | chr5_4:32935505-32935524 | Msa0848440:CDS | 25.0% |
! | GTTACTGAGATAGTTTATAA+GGG | - | chr5_4:32935506-32935525 | Msa0848440:CDS | 25.0% |
!! | ATTTCATTGATTGGATTAAC+AGG | + | chr5_4:32935605-32935624 | None:intergenic | 25.0% |
! | ATTGATATTGAAGAATTCTC+AGG | + | chr5_4:32935683-32935702 | None:intergenic | 25.0% |
! | GAGAATTCTTCAATATCAAT+TGG | - | chr5_4:32935683-32935702 | Msa0848440:CDS | 25.0% |
! | AATTCTTCAATATCAATTGG+AGG | - | chr5_4:32935686-32935705 | Msa0848440:CDS | 25.0% |
!! | TGCATTTTACTTCAACATAA+AGG | + | chr5_4:32935910-32935929 | None:intergenic | 25.0% |
! | TTTATGTTGAAGTAAAATGC+AGG | - | chr5_4:32935909-32935928 | Msa0848440:CDS | 25.0% |
! | AAAAATGAAGGTGAAAATGA+GGG | - | chr5_4:32936061-32936080 | Msa0848440:intron | 25.0% |
! | ATAATTTCATACCTTGGATT+TGG | + | chr5_4:32936217-32936236 | None:intergenic | 25.0% |
! | AAGTGAATAATTTCATACCT+TGG | + | chr5_4:32936223-32936242 | None:intergenic | 25.0% |
!! | TACTACTACTAGTTAATTTG+AGG | - | chr5_4:32936290-32936309 | Msa0848440:intron | 25.0% |
!! | TTAATTTGAGGATTCAATGA+TGG | - | chr5_4:32936302-32936321 | Msa0848440:intron | 25.0% |
! | ATATTTGTAAACTGCTATCA+TGG | + | chr5_4:32936339-32936358 | None:intergenic | 25.0% |
!!! | TTTGTTTCTCTATCTGTTTT+AGG | - | chr5_4:32936406-32936425 | Msa0848440:intron | 25.0% |
!!! | CATTATTGCTTGTTTCTTTT+TGG | - | chr5_4:32936437-32936456 | Msa0848440:intron | 25.0% |
!!! | ATTTTTAGTAGATACATGGA+AGG | - | chr5_4:32937235-32937254 | Msa0848440:intron | 25.0% |
! | TTGTAAAGTTTATACAGGAT+GGG | - | chr5_4:32937360-32937379 | Msa0848440:CDS | 25.0% |
!!! | CTTTTATTTTCCAATACACA+AGG | - | chr5_4:32937407-32937426 | Msa0848440:CDS | 25.0% |
! | GCTTCATATTTAATCATTTG+TGG | - | chr5_4:32937489-32937508 | Msa0848440:CDS | 25.0% |
TTTGATGTTGAGAAATGGAA+GGG | + | chr5_4:32933570-32933589 | None:intergenic | 30.0% | |
! | TTTTGATGTTGAGAAATGGA+AGG | + | chr5_4:32933571-32933590 | None:intergenic | 30.0% |
CATAAGAAAGAGAAGAGAAA+AGG | + | chr5_4:32933632-32933651 | None:intergenic | 30.0% | |
! | CTTTTCTCTTCTCTTTCTTA+TGG | - | chr5_4:32933630-32933649 | Msa0848440:three_prime_UTR | 30.0% |
AGAAAGTTGTTGACATGAAA+GGG | + | chr5_4:32933744-32933763 | None:intergenic | 30.0% | |
GCTAAGAAAAGTTTGAACAA+AGG | - | chr5_4:32934252-32934271 | Msa0848440:CDS | 30.0% | |
AATTGGATGAACAATTCTGA+GGG | - | chr5_4:32934578-32934597 | Msa0848440:intron | 30.0% | |
TGATGATTGAAAAGTTGTTG+TGG | + | chr5_4:32934675-32934694 | None:intergenic | 30.0% | |
! | ACTTTTCAATCATCAACTGT+TGG | - | chr5_4:32934680-32934699 | Msa0848440:intron | 30.0% |
TGTAGTCAGTACATTATTGA+CGG | - | chr5_4:32934879-32934898 | Msa0848440:intron | 30.0% | |
TTCAAAACATCGATGATCAT+TGG | + | chr5_4:32935005-32935024 | None:intergenic | 30.0% | |
ATATGGACAAAAGCAAGTTA+AGG | - | chr5_4:32935397-32935416 | Msa0848440:intron | 30.0% | |
TATGGACAAAAGCAAGTTAA+GGG | - | chr5_4:32935398-32935417 | Msa0848440:CDS | 30.0% | |
AAAGTTGAGAGATCAATTGA+GGG | - | chr5_4:32935479-32935498 | Msa0848440:CDS | 30.0% | |
TGATCATGGATTTCATTGAT+TGG | + | chr5_4:32935614-32935633 | None:intergenic | 30.0% | |
ATGTTCTTAAATTGCTGATG+CGG | - | chr5_4:32935861-32935880 | Msa0848440:CDS | 30.0% | |
GAAAAATGAAGGTGAAAATG+AGG | - | chr5_4:32936060-32936079 | Msa0848440:intron | 30.0% | |
ATATGGACAGAAAGTTGTTA+AGG | - | chr5_4:32936186-32936205 | Msa0848440:intron | 30.0% | |
TATGGACAGAAAGTTGTTAA+GGG | - | chr5_4:32936187-32936206 | Msa0848440:intron | 30.0% | |
!! | CTTTTTGGAAACTCTACTAT+AGG | - | chr5_4:32936452-32936471 | Msa0848440:intron | 30.0% |
TTAGAAAAGGCAAGGAAAAT+TGG | + | chr5_4:32936489-32936508 | None:intergenic | 30.0% | |
! | TTTCCTTGCCTTTTCTAATT+TGG | - | chr5_4:32936491-32936510 | Msa0848440:CDS | 30.0% |
TAACCAAATTAGAAAAGGCA+AGG | + | chr5_4:32936497-32936516 | None:intergenic | 30.0% | |
!! | GGTTATTTCTTGGTCAAATT+TGG | - | chr5_4:32936512-32936531 | Msa0848440:CDS | 30.0% |
ATGTTGTGTTCGTTCTATAT+CGG | - | chr5_4:32936706-32936725 | Msa0848440:intron | 30.0% | |
TTGAGAATCCATAATTTCCT+TGG | + | chr5_4:32937066-32937085 | None:intergenic | 30.0% | |
AAGGAAATTATGGATTCTCA+AGG | - | chr5_4:32937065-32937084 | Msa0848440:intron | 30.0% | |
! | CTCAAGGTTTGATAATCAAA+TGG | - | chr5_4:32937081-32937100 | Msa0848440:intron | 30.0% |
!!! | GCATTTGTTTTTTGGATGTT+TGG | - | chr5_4:32937330-32937349 | Msa0848440:CDS | 30.0% |
CTTGTAAAGTTTATACAGGA+TGG | - | chr5_4:32937359-32937378 | Msa0848440:CDS | 30.0% | |
!! | TTAATCATTTGTGGGTTGAT+TGG | - | chr5_4:32937498-32937517 | Msa0848440:CDS | 30.0% |
TTGATGTTGAGAAATGGAAG+GGG | + | chr5_4:32933569-32933588 | None:intergenic | 35.0% | |
GAGAAAGTTGTTGACATGAA+AGG | + | chr5_4:32933745-32933764 | None:intergenic | 35.0% | |
AGTAAGAAGAAGGAGAAACA+GGG | + | chr5_4:32933876-32933895 | None:intergenic | 35.0% | |
AAGTAAGAAGAAGGAGAAAC+AGG | + | chr5_4:32933877-32933896 | None:intergenic | 35.0% | |
GGAATAGCAAAGTAAGAAGA+AGG | + | chr5_4:32933886-32933905 | None:intergenic | 35.0% | |
TTGGAAGAGTTAAGCATAAC+AGG | + | chr5_4:32933943-32933962 | None:intergenic | 35.0% | |
CAATTGGATGAACAATTCTG+AGG | - | chr5_4:32934577-32934596 | Msa0848440:intron | 35.0% | |
ATTGGATGAACAATTCTGAG+GGG | - | chr5_4:32934579-32934598 | Msa0848440:intron | 35.0% | |
! | TCTTTTCAAACCCAACAACA+AGG | - | chr5_4:32934629-32934648 | Msa0848440:intron | 35.0% |
! | CTTTTCAAACCCAACAACAA+GGG | - | chr5_4:32934630-32934649 | Msa0848440:intron | 35.0% |
TTTCAATCATCAACTGTTGG+TGG | - | chr5_4:32934683-32934702 | Msa0848440:intron | 35.0% | |
!! | AAATCCATTGTTGGTGTTGT+TGG | + | chr5_4:32935291-32935310 | None:intergenic | 35.0% |
GTCTGATTGAAATCCATTGT+TGG | + | chr5_4:32935300-32935319 | None:intergenic | 35.0% | |
TGTATCCATCATCTGATCTT+CGG | + | chr5_4:32935367-32935386 | None:intergenic | 35.0% | |
!! | GATCAGATGATGGATACAAT+TGG | - | chr5_4:32935369-32935388 | Msa0848440:intron | 35.0% |
GGATACAATTGGCGAAAATA+TGG | - | chr5_4:32935380-32935399 | Msa0848440:intron | 35.0% | |
GTGCATTTGTAGTAACTTCT+CGG | + | chr5_4:32935434-32935453 | None:intergenic | 35.0% | |
TCTTCTTAGTAGGACAGTTA+GGG | + | chr5_4:32935460-32935479 | None:intergenic | 35.0% | |
TTCTTCTTAGTAGGACAGTT+AGG | + | chr5_4:32935461-32935480 | None:intergenic | 35.0% | |
CTCTCAACTTTCTTCTTAGT+AGG | + | chr5_4:32935470-32935489 | None:intergenic | 35.0% | |
GAAAGTTGAGAGATCAATTG+AGG | - | chr5_4:32935478-32935497 | Msa0848440:CDS | 35.0% | |
TCATATGCATCACATGGTAA+TGG | - | chr5_4:32935635-32935654 | Msa0848440:CDS | 35.0% | |
!! | ATCACATGGTAATGGACAAA+TGG | - | chr5_4:32935643-32935662 | Msa0848440:CDS | 35.0% |
! | TGGTGATGAATTTGATGAAG+AGG | - | chr5_4:32935760-32935779 | Msa0848440:CDS | 35.0% |
! | ATTTACCATCTTTTAGCCTC+AGG | + | chr5_4:32935788-32935807 | None:intergenic | 35.0% |
AACAAGTGACATTGATATCC+TGG | - | chr5_4:32936141-32936160 | Msa0848440:intron | 35.0% | |
TTTGGATTTGAAGGGTTGTT+TGG | + | chr5_4:32936947-32936966 | None:intergenic | 35.0% | |
CAGCATTGTTTGGATTTGAA+GGG | + | chr5_4:32936955-32936974 | None:intergenic | 35.0% | |
!! | TGCTGTTGTTGATTCATGTA+AGG | + | chr5_4:32937109-32937128 | None:intergenic | 35.0% |
CAACAACAAATGGCTGAAAA+TGG | - | chr5_4:32937136-32937155 | Msa0848440:intron | 35.0% | |
TCAAGGAACATGTCATCTTT+AGG | + | chr5_4:32937187-32937206 | None:intergenic | 35.0% | |
TTAGTAGATACATGGAAGGT+TGG | - | chr5_4:32937239-32937258 | Msa0848440:CDS | 35.0% | |
! | ACATGGAAGGTTGGAAATTT+TGG | - | chr5_4:32937248-32937267 | Msa0848440:CDS | 35.0% |
!! | AGGTTGGAAATTTTGGAAAG+TGG | - | chr5_4:32937255-32937274 | Msa0848440:CDS | 35.0% |
!! | GGTTGGAAATTTTGGAAAGT+GGG | - | chr5_4:32937256-32937275 | Msa0848440:CDS | 35.0% |
!! | AAATTTTGGAAAGTGGGTCT+AGG | - | chr5_4:32937262-32937281 | Msa0848440:CDS | 35.0% |
! | AAGTTTATACAGGATGGGTT+TGG | - | chr5_4:32937365-32937384 | Msa0848440:CDS | 35.0% |
TGCACAAAAACCTTGTGTAT+TGG | + | chr5_4:32937420-32937439 | None:intergenic | 35.0% | |
AGAAAGAGAAGAGAAAAGGG+TGG | + | chr5_4:32933628-32933647 | None:intergenic | 40.0% | |
!! | GGGGGTGTAGACTTAAATTT+TGG | + | chr5_4:32933829-32933848 | None:intergenic | 40.0% |
TAAGAAGAAGGAGAAACAGG+GGG | + | chr5_4:32933874-32933893 | None:intergenic | 40.0% | |
GTAAGAAGAAGGAGAAACAG+GGG | + | chr5_4:32933875-32933894 | None:intergenic | 40.0% | |
!! | TCTTACTTTGCTATTCCTCC+TGG | - | chr5_4:32933889-32933908 | Msa0848440:three_prime_UTR | 40.0% |
GCATAACAGGAGAATCAAGA+AGG | + | chr5_4:32933930-32933949 | None:intergenic | 40.0% | |
! | ATTTTGCCATCACCTACAAC+TGG | - | chr5_4:32934530-32934549 | Msa0848440:intron | 40.0% |
CTGCTCAAAGCAACTACAAT+TGG | - | chr5_4:32934561-32934580 | Msa0848440:intron | 40.0% | |
GACTGTCCAATCTAGACTAA+TGG | + | chr5_4:32934906-32934925 | None:intergenic | 40.0% | |
TCATGTAACAGCAACAGCAA+TGG | - | chr5_4:32935147-32935166 | Msa0848440:intron | 40.0% | |
GTTTGAACACTAGCAATCTC+AGG | + | chr5_4:32935269-32935288 | None:intergenic | 40.0% | |
CAAACCAACAACACCAACAA+TGG | - | chr5_4:32935284-32935303 | Msa0848440:intron | 40.0% | |
ATCATCTGATCTTCGGCTTA+AGG | + | chr5_4:32935360-32935379 | None:intergenic | 40.0% | |
TTAAGCCGAAGATCAGATGA+TGG | - | chr5_4:32935359-32935378 | Msa0848440:intron | 40.0% | |
ATCATCTTCTAATGCTCTCG+TGG | - | chr5_4:32935574-32935593 | Msa0848440:CDS | 40.0% | |
GTGATGCATATGACTGATCA+TGG | + | chr5_4:32935628-32935647 | None:intergenic | 40.0% | |
GATCAGTCATATGCATCACA+TGG | - | chr5_4:32935629-32935648 | Msa0848440:CDS | 40.0% | |
ATTTGATGAAGAGGAACCTG+AGG | - | chr5_4:32935769-32935788 | Msa0848440:CDS | 40.0% | |
AAGTAAAATGCAGGCTGATG+CGG | - | chr5_4:32935918-32935937 | Msa0848440:CDS | 40.0% | |
GTTGTCTGAACTACAACTCT+AGG | + | chr5_4:32936124-32936143 | None:intergenic | 40.0% | |
GACATTGATATCCTGGATGA+TGG | - | chr5_4:32936148-32936167 | Msa0848440:intron | 40.0% | |
GGTTACAGATGGAGGAAATA+TGG | - | chr5_4:32936169-32936188 | Msa0848440:intron | 40.0% | |
TTAAGGGCAATCCAAATCCA+AGG | - | chr5_4:32936203-32936222 | Msa0848440:intron | 40.0% | |
TAAACTGCTATCATGGAGTG+AGG | + | chr5_4:32936332-32936351 | None:intergenic | 40.0% | |
AAGGCAAGGAAAATTGGTAC+AGG | + | chr5_4:32936483-32936502 | None:intergenic | 40.0% | |
CATATCTGTCAGTGTCATGT+CGG | + | chr5_4:32936634-32936653 | None:intergenic | 40.0% | |
TTTGAAGGGTTGTTTGGCAT+TGG | + | chr5_4:32936941-32936960 | None:intergenic | 40.0% | |
GCAGCATTGTTTGGATTTGA+AGG | + | chr5_4:32936956-32936975 | None:intergenic | 40.0% | |
TTGAATGGTGATTGTCCTTG+AGG | + | chr5_4:32937025-32937044 | None:intergenic | 40.0% | |
TTCAGCACAGCAAAGATTCA+AGG | + | chr5_4:32937204-32937223 | None:intergenic | 40.0% | |
! | TATACAGGATGGGTTTGGTT+TGG | - | chr5_4:32937370-32937389 | Msa0848440:CDS | 40.0% |
!! | CATTAGTTTGTGGCTTCTCT+TGG | - | chr5_4:32937449-32937468 | Msa0848440:CDS | 40.0% |
TGGATGTAGTTAACCGCATT+TGG | - | chr5_4:32937518-32937537 | Msa0848440:CDS | 40.0% | |
TCATCTGAAGAAGCAGCAGA+AGG | + | chr5_4:32933784-32933803 | None:intergenic | 45.0% | |
TGACAAAGGCAAAGAAGGAG+GGG | + | chr5_4:32933848-32933867 | None:intergenic | 45.0% | |
GTGACAAAGGCAAAGAAGGA+GGG | + | chr5_4:32933849-32933868 | None:intergenic | 45.0% | |
GAGAATCAAGAAGGTCAGCA+GGG | + | chr5_4:32933921-32933940 | None:intergenic | 45.0% | |
! | AAAGCACCAGTTGTAGGTGA+TGG | + | chr5_4:32934539-32934558 | None:intergenic | 45.0% |
GGGGAATCAGCAAATGAGAA+AGG | - | chr5_4:32934598-32934617 | Msa0848440:intron | 45.0% | |
! | GACGGTCCATTAGTCTAGAT+TGG | - | chr5_4:32934897-32934916 | Msa0848440:intron | 45.0% |
!! | AAGGTTTGAGTTGGTTGCTG+TGG | + | chr5_4:32935341-32935360 | None:intergenic | 45.0% |
CTTCGGCTTAAGGTTTGAGT+TGG | + | chr5_4:32935350-32935369 | None:intergenic | 45.0% | |
ATGCTAAGCCTCAATGCACA+AGG | - | chr5_4:32935540-32935559 | Msa0848440:CDS | 45.0% | |
GAGTTTCTCCTTGTGCATTG+AGG | + | chr5_4:32935551-32935570 | None:intergenic | 45.0% | |
TTGAGCAGAGTTCTCACCAA+AGG | - | chr5_4:32935720-32935739 | Msa0848440:CDS | 45.0% | |
TCTCACCAAAGGAGTAGATC+AGG | - | chr5_4:32935731-32935750 | Msa0848440:CDS | 45.0% | |
AGGAACCTGAGGCTAAAAGA+TGG | - | chr5_4:32935780-32935799 | Msa0848440:CDS | 45.0% | |
ACGACATCACAACTGCAATG+CGG | + | chr5_4:32935944-32935963 | None:intergenic | 45.0% | |
TCTCTCACAGTTCTACTTGC+AGG | + | chr5_4:32936100-32936119 | None:intergenic | 45.0% | |
! | TCCTGGATGATGGTTACAGA+TGG | - | chr5_4:32936158-32936177 | Msa0848440:intron | 45.0% |
TCCATCTGTAACCATCATCC+AGG | + | chr5_4:32936162-32936181 | None:intergenic | 45.0% | |
! | TGGATGATGGTTACAGATGG+AGG | - | chr5_4:32936161-32936180 | Msa0848440:intron | 45.0% |
CGACATGACACTGACAGATA+TGG | - | chr5_4:32936632-32936651 | Msa0848440:CDS | 45.0% | |
AACGTGCCTCGCATGATTTA+AGG | - | chr5_4:32936834-32936853 | Msa0848440:intron | 45.0% | |
ACGTGCCTCGCATGATTTAA+GGG | - | chr5_4:32936835-32936854 | Msa0848440:intron | 45.0% | |
GCAGTGATCACAACTTACGA+GGG | - | chr5_4:32936857-32936876 | Msa0848440:intron | 45.0% | |
! | GCATTGGTCTGTTCACAGAA+TGG | + | chr5_4:32936925-32936944 | None:intergenic | 45.0% |
TGCAGCATCTGAAGGTTGAA+TGG | + | chr5_4:32937040-32937059 | None:intergenic | 45.0% | |
ATTCAACCTTCAGATGCTGC+AGG | - | chr5_4:32937039-32937058 | Msa0848440:intron | 45.0% | |
TTCAACCTTCAGATGCTGCA+GGG | - | chr5_4:32937040-32937059 | Msa0848440:intron | 45.0% | |
GCAGCAGCAACAACAACAAA+TGG | - | chr5_4:32937126-32937145 | Msa0848440:intron | 45.0% | |
!! | TGGTTTCTCCTCTAGAGCTA+AGG | - | chr5_4:32937156-32937175 | Msa0848440:intron | 45.0% |
!! | AGGTTCTTCCTTAGCTCTAG+AGG | + | chr5_4:32937167-32937186 | None:intergenic | 45.0% |
!! | GGCTTCTCTTGGCTTTAGTT+AGG | - | chr5_4:32937460-32937479 | Msa0848440:CDS | 45.0% |
TTGATCGCACATGCCAAATG+CGG | + | chr5_4:32937534-32937553 | None:intergenic | 45.0% | |
TTGGCATGTGCGATCAAGAT+TGG | - | chr5_4:32937537-32937556 | Msa0848440:exon | 45.0% | |
CATGTGCGATCAAGATTGGA+CGG | - | chr5_4:32937541-32937560 | Msa0848440:exon | 45.0% | |
CCGATCAAGATCAAGACAGA+CGG | + | chr5_4:32937634-32937653 | None:intergenic | 45.0% | |
CCGTCTGTCTTGATCTTGAT+CGG | - | chr5_4:32937631-32937650 | Msa0848440:five_prime_UTR | 45.0% | |
GACAAAGGCAAAGAAGGAGG+GGG | + | chr5_4:32933847-32933866 | None:intergenic | 50.0% | |
GGTGACAAAGGCAAAGAAGG+AGG | + | chr5_4:32933850-32933869 | None:intergenic | 50.0% | |
GGAGGTGACAAAGGCAAAGA+AGG | + | chr5_4:32933853-32933872 | None:intergenic | 50.0% | |
GGAGAATCAAGAAGGTCAGC+AGG | + | chr5_4:32933922-32933941 | None:intergenic | 50.0% | |
!! | GCAGCAAAAGCACCAGTTGT+AGG | + | chr5_4:32934545-32934564 | None:intergenic | 50.0% |
TTGCTGTGGTTGCTGGTAAC+TGG | + | chr5_4:32935327-32935346 | None:intergenic | 50.0% | |
CACCAAAGGAGTAGATCAGG+TGG | - | chr5_4:32935734-32935753 | Msa0848440:CDS | 50.0% | |
CACCACCTGATCTACTCCTT+TGG | + | chr5_4:32935739-32935758 | None:intergenic | 50.0% | |
GCTTCCTCACTGGACAGTTA+GGG | + | chr5_4:32936808-32936827 | None:intergenic | 50.0% | |
TGCTTCCTCACTGGACAGTT+AGG | + | chr5_4:32936809-32936828 | None:intergenic | 50.0% | |
CACTGCCCTTAAATCATGCG+AGG | + | chr5_4:32936843-32936862 | None:intergenic | 50.0% | |
GGCAGTGATCACAACTTACG+AGG | - | chr5_4:32936856-32936875 | Msa0848440:intron | 50.0% | |
TCCAAACAATGCTGCAGCCA+TGG | - | chr5_4:32936961-32936980 | Msa0848440:intron | 50.0% | |
CTGACTCTCAAGAGGCCTTA+TGG | + | chr5_4:32936987-32937006 | None:intergenic | 50.0% | |
TAAGGCCTCTTGAGAGTCAG+AGG | - | chr5_4:32936987-32937006 | Msa0848440:intron | 50.0% | |
! | TGTCCTTGAGGTGCTTGTTG+TGG | + | chr5_4:32937013-32937032 | None:intergenic | 50.0% |
CTGCAGGGCCAAGGAAATTA+TGG | - | chr5_4:32937055-32937074 | Msa0848440:intron | 50.0% | |
GAAACAGGGGGAGGTGACAA+AGG | + | chr5_4:32933862-32933881 | None:intergenic | 55.0% | |
GAAGAAGGAGAAACAGGGGG+AGG | + | chr5_4:32933871-32933890 | None:intergenic | 55.0% | |
TCAGCAGGGCTTAAACCAGG+AGG | + | chr5_4:32933907-32933926 | None:intergenic | 55.0% | |
AGGTCAGCAGGGCTTAAACC+AGG | + | chr5_4:32933910-32933929 | None:intergenic | 55.0% | |
!! | AGCAGCAGGCCCTTGTTGTT+GGG | + | chr5_4:32934642-32934661 | None:intergenic | 55.0% |
GTGGATGCAGTAACAGCAGC+AGG | + | chr5_4:32934656-32934675 | None:intergenic | 55.0% | |
! | GAGTTGGTTGCTGTGGTTGC+TGG | + | chr5_4:32935334-32935353 | None:intergenic | 55.0% |
AGGAGTAGATCAGGTGGTGC+TGG | - | chr5_4:32935740-32935759 | Msa0848440:CDS | 55.0% | |
CACACCCTAACTGTCCAGTG+AGG | - | chr5_4:32936801-32936820 | Msa0848440:intron | 55.0% | |
CGTTCGACATGCTTCCTCAC+TGG | + | chr5_4:32936818-32936837 | None:intergenic | 55.0% | |
GCCATGGCTGCAGCATTGTT+TGG | + | chr5_4:32936965-32936984 | None:intergenic | 55.0% | |
ATGCTGCAGCCATGGCCATA+AGG | - | chr5_4:32936969-32936988 | Msa0848440:intron | 55.0% | |
! | CTCAAGAGGCCTTATGGCCA+TGG | + | chr5_4:32936981-32937000 | None:intergenic | 55.0% |
TGTGGCCTCTGACTCTCAAG+AGG | + | chr5_4:32936995-32937014 | None:intergenic | 55.0% | |
AGGCCACAACAAGCACCTCA+AGG | - | chr5_4:32937007-32937026 | Msa0848440:intron | 55.0% | |
! | CAGCAGCAGGCCCTTGTTGT+TGG | + | chr5_4:32934643-32934662 | None:intergenic | 60.0% |
CACGAGCAGCGGGAACATCA+TGG | + | chr5_4:32936892-32936911 | None:intergenic | 60.0% | |
CATGATGTTCCCGCTGCTCG+TGG | - | chr5_4:32936890-32936909 | Msa0848440:intron | 60.0% | |
CTTCCACTTCCACGAGCAGC+GGG | + | chr5_4:32936902-32936921 | None:intergenic | 60.0% | |
GCTTCCACTTCCACGAGCAG+CGG | + | chr5_4:32936903-32936922 | None:intergenic | 60.0% | |
CTTGGCCCTGCAGCATCTGA+AGG | + | chr5_4:32937048-32937067 | None:intergenic | 60.0% | |
CTTCAGATGCTGCAGGGCCA+AGG | - | chr5_4:32937046-32937065 | Msa0848440:intron | 60.0% | |
GTTCCCGCTGCTCGTGGAAG+TGG | - | chr5_4:32936896-32936915 | Msa0848440:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_4 | gene | 32933528 | 32937671 | 32933528 | ID=Msa0848440;Name=Msa0848440 |
chr5_4 | mRNA | 32933528 | 32937671 | 32933528 | ID=Msa0848440-mRNA-1;Parent=Msa0848440;Name=Msa0848440-mRNA-1;_AED=0.11;_eAED=0.11;_QI=121|1|1|1|1|1|5|449|582 |
chr5_4 | exon | 32933528 | 32934415 | 32933528 | ID=Msa0848440-mRNA-1:exon:11505;Parent=Msa0848440-mRNA-1 |
chr5_4 | exon | 32934975 | 32935139 | 32934975 | ID=Msa0848440-mRNA-1:exon:11504;Parent=Msa0848440-mRNA-1 |
chr5_4 | exon | 32935398 | 32936041 | 32935398 | ID=Msa0848440-mRNA-1:exon:11503;Parent=Msa0848440-mRNA-1 |
chr5_4 | exon | 32936484 | 32936669 | 32936484 | ID=Msa0848440-mRNA-1:exon:11502;Parent=Msa0848440-mRNA-1 |
chr5_4 | exon | 32937236 | 32937671 | 32937236 | ID=Msa0848440-mRNA-1:exon:11501;Parent=Msa0848440-mRNA-1 |
chr5_4 | five_prime_UTR | 32937551 | 32937671 | 32937551 | ID=Msa0848440-mRNA-1:five_prime_utr;Parent=Msa0848440-mRNA-1 |
chr5_4 | CDS | 32937236 | 32937550 | 32937236 | ID=Msa0848440-mRNA-1:cds;Parent=Msa0848440-mRNA-1 |
chr5_4 | CDS | 32936484 | 32936669 | 32936484 | ID=Msa0848440-mRNA-1:cds;Parent=Msa0848440-mRNA-1 |
chr5_4 | CDS | 32935398 | 32936041 | 32935398 | ID=Msa0848440-mRNA-1:cds;Parent=Msa0848440-mRNA-1 |
chr5_4 | CDS | 32934975 | 32935139 | 32934975 | ID=Msa0848440-mRNA-1:cds;Parent=Msa0848440-mRNA-1 |
chr5_4 | CDS | 32933977 | 32934415 | 32933977 | ID=Msa0848440-mRNA-1:cds;Parent=Msa0848440-mRNA-1 |
chr5_4 | three_prime_UTR | 32933528 | 32933976 | 32933528 | ID=Msa0848440-mRNA-1:three_prime_utr;Parent=Msa0848440-mRNA-1 |
Gene Sequence |
Protein sequence |