Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0734280 | XP_003615688.2 | 96.322 | 707 | 23 | 1 | 1 | 707 | 1 | 704 | 0.0 | 1420 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0734280 | sp|Q9LUZ4|C3H66_ARATH | 47.050 | 695 | 267 | 18 | 23 | 706 | 2 | 606 | 0.0 | 572 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0734280 | G7JZH7 | 96.322 | 707 | 23 | 1 | 1 | 707 | 1 | 704 | 0.0 | 1420 |
Gene ID | Type | Classification |
---|---|---|
Msa0734280 | TF | C3H |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0094710 | Msa0734280 | 0.809148 | 2.183262e-50 | -8.615850e-47 |
Msa0679670 | Msa0734280 | 0.814414 | 1.559942e-51 | -8.615850e-47 |
Msa0713060 | Msa0734280 | 0.804094 | 2.547995e-49 | -8.615850e-47 |
Msa0734280 | Msa0734940 | 0.836483 | 9.111704e-57 | -8.615850e-47 |
Msa0734280 | Msa0775690 | 0.819179 | 1.330761e-52 | -8.615850e-47 |
Msa0734280 | Msa0782960 | 0.815588 | 8.561378e-52 | -8.615850e-47 |
Msa0734280 | Msa0801790 | 0.803080 | 4.133767e-49 | -8.615850e-47 |
Msa0734280 | Msa0814080 | 0.822608 | 2.162778e-53 | -8.615850e-47 |
Msa0734280 | Msa0853630 | 0.805459 | 1.321260e-49 | -8.615850e-47 |
Msa0734280 | Msa1000800 | 0.822105 | 2.829609e-53 | -8.615850e-47 |
Msa0734280 | Msa1011250 | 0.812618 | 3.872284e-51 | -8.615850e-47 |
Msa0734280 | Msa1180720 | 0.815418 | 9.340855e-52 | -8.615850e-47 |
Msa0734280 | Msa1188350 | 0.819143 | 1.355585e-52 | -8.615850e-47 |
Msa0734280 | Msa1208990 | 0.816000 | 6.929744e-52 | -8.615850e-47 |
Msa0734280 | Msa1225580 | 0.819120 | 1.372155e-52 | -8.615850e-47 |
Msa0734280 | Msa1252810 | 0.804827 | 1.792222e-49 | -8.615850e-47 |
Msa0734280 | Msa1272010 | 0.839607 | 1.432297e-57 | -8.615850e-47 |
Msa0734280 | Msa1274380 | 0.816647 | 4.964913e-52 | -8.615850e-47 |
Msa0734280 | Msa1312440 | 0.809652 | 1.702182e-50 | -8.615850e-47 |
Msa0734280 | Msa1355510 | 0.819056 | 1.419022e-52 | -8.615850e-47 |
Msa0388730 | Msa0734280 | 0.800185 | 1.622939e-48 | -8.615850e-47 |
Msa0264680 | Msa0734280 | 0.819183 | 1.327941e-52 | -8.615850e-47 |
Msa0276430 | Msa0734280 | 0.823705 | 1.199524e-53 | -8.615850e-47 |
Msa0302730 | Msa0734280 | 0.821362 | 4.203578e-53 | -8.615850e-47 |
Msa0362160 | Msa0734280 | 0.807083 | 6.011403e-50 | -8.615850e-47 |
Msa0600590 | Msa0734280 | 0.803606 | 3.216972e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0734280 | MtrunA17_Chr5g0430211 | 96.322 | 707 | 23 | 1 | 1 | 707 | 1 | 704 | 0.0 | 1420 |
Msa0734280 | MtrunA17_Chr5g0437251 | 49.712 | 694 | 296 | 13 | 30 | 706 | 25 | 682 | 0.0 | 636 |
Msa0734280 | MtrunA17_Chr1g0187591 | 54.294 | 652 | 205 | 14 | 1 | 642 | 1 | 569 | 0.0 | 615 |
Msa0734280 | MtrunA17_Chr3g0105131 | 46.213 | 647 | 197 | 17 | 1 | 641 | 1 | 502 | 3.07e-157 | 464 |
Msa0734280 | MtrunA17_Chr7g0257831 | 42.229 | 682 | 291 | 19 | 35 | 663 | 47 | 678 | 2.56e-155 | 467 |
Msa0734280 | MtrunA17_Chr3g0088521 | 39.532 | 726 | 343 | 18 | 33 | 702 | 43 | 728 | 2.49e-146 | 444 |
Msa0734280 | MtrunA17_Chr3g0105101 | 46.465 | 495 | 140 | 12 | 39 | 530 | 29 | 401 | 7.66e-125 | 377 |
Msa0734280 | MtrunA17_Chr3g0113651 | 46.404 | 431 | 161 | 5 | 33 | 462 | 8 | 369 | 2.50e-124 | 380 |
Msa0734280 | MtrunA17_Chr3g0113651 | 32.569 | 218 | 121 | 9 | 483 | 698 | 322 | 515 | 9.33e-18 | 87.0 |
Msa0734280 | MtrunA17_Chr1g0171151 | 40.406 | 542 | 255 | 15 | 35 | 538 | 31 | 542 | 7.06e-109 | 343 |
Msa0734280 | MtrunA17_Chr3g0092171 | 43.631 | 369 | 163 | 7 | 32 | 381 | 80 | 422 | 3.17e-89 | 288 |
Msa0734280 | MtrunA17_Chr3g0092221 | 41.194 | 335 | 139 | 10 | 138 | 451 | 51 | 348 | 7.52e-73 | 241 |
Msa0734280 | MtrunA17_Chr3g0105121 | 38.532 | 436 | 177 | 14 | 229 | 660 | 8 | 356 | 1.25e-69 | 231 |
Msa0734280 | MtrunA17_Chr3g0105141 | 65.000 | 140 | 47 | 2 | 199 | 336 | 4 | 143 | 1.55e-61 | 203 |
Msa0734280 | MtrunA17_Chr8g0389561 | 43.498 | 223 | 115 | 3 | 162 | 381 | 21 | 235 | 1.08e-54 | 192 |
Msa0734280 | MtrunA17_Chr6g0487481 | 57.971 | 138 | 48 | 2 | 196 | 332 | 77 | 205 | 4.77e-52 | 184 |
Msa0734280 | MtrunA17_Chr3g0135351 | 49.419 | 172 | 73 | 3 | 202 | 372 | 32 | 190 | 1.17e-51 | 181 |
Msa0734280 | MtrunA17_Chr2g0324781 | 61.261 | 111 | 43 | 0 | 230 | 340 | 77 | 187 | 2.20e-47 | 173 |
Msa0734280 | MtrunA17_Chr4g0040391 | 57.009 | 107 | 46 | 0 | 226 | 332 | 56 | 162 | 2.98e-44 | 161 |
Msa0734280 | MtrunA17_Chr3g0105151 | 35.517 | 290 | 112 | 12 | 394 | 671 | 1 | 227 | 6.92e-31 | 121 |
Msa0734280 | MtrunA17_Chr3g0105111 | 43.103 | 116 | 39 | 5 | 596 | 706 | 17 | 110 | 1.51e-14 | 70.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0734280 | AT5G58620.1 | 47.050 | 695 | 267 | 18 | 23 | 706 | 2 | 606 | 0.0 | 572 |
Msa0734280 | AT2G40140.2 | 42.297 | 714 | 285 | 17 | 1 | 706 | 1 | 595 | 9.74e-174 | 510 |
Msa0734280 | AT2G40140.1 | 42.297 | 714 | 285 | 17 | 1 | 706 | 1 | 595 | 9.74e-174 | 510 |
Msa0734280 | AT2G41900.1 | 39.702 | 738 | 300 | 23 | 35 | 702 | 48 | 710 | 5.76e-144 | 437 |
Msa0734280 | AT3G55980.1 | 50.000 | 474 | 194 | 13 | 1 | 462 | 1 | 443 | 3.97e-142 | 428 |
Msa0734280 | AT3G55980.1 | 38.071 | 197 | 82 | 8 | 514 | 706 | 419 | 579 | 2.49e-21 | 99.0 |
Msa0734280 | AT3G55980.2 | 50.000 | 474 | 194 | 13 | 1 | 462 | 68 | 510 | 1.24e-141 | 429 |
Msa0734280 | AT3G55980.2 | 38.071 | 197 | 82 | 8 | 514 | 706 | 486 | 646 | 4.28e-21 | 98.6 |
Msa0734280 | AT5G12850.1 | 38.267 | 750 | 306 | 25 | 30 | 702 | 37 | 706 | 1.39e-139 | 426 |
Msa0734280 | AT4G29190.1 | 52.273 | 176 | 83 | 1 | 212 | 387 | 62 | 236 | 1.74e-54 | 191 |
Msa0734280 | AT2G25900.2 | 66.964 | 112 | 37 | 0 | 226 | 337 | 86 | 197 | 3.55e-53 | 186 |
Msa0734280 | AT2G25900.1 | 66.964 | 112 | 37 | 0 | 226 | 337 | 86 | 197 | 3.55e-53 | 186 |
Msa0734280 | AT2G19810.1 | 63.333 | 120 | 44 | 0 | 215 | 334 | 63 | 182 | 8.46e-53 | 186 |
Msa0734280 | AT5G07500.1 | 52.703 | 148 | 66 | 1 | 189 | 332 | 7 | 154 | 1.28e-49 | 174 |
Msa0734280 | AT1G03790.1 | 51.634 | 153 | 66 | 3 | 197 | 345 | 53 | 201 | 2.70e-47 | 172 |
Msa0734280 | AT5G44260.1 | 55.970 | 134 | 54 | 2 | 210 | 342 | 44 | 173 | 2.69e-45 | 166 |
Find 185 sgRNAs with CRISPR-Local
Find 432 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCCAGTCTTCAATCTGCTTT+TGG | 0.183105 | 5_1:-48033790 | None:intergenic |
TCAGACATGTCTTCTGTTTC+CGG | 0.194365 | 5_1:+48033110 | Msa0734280:CDS |
GATGTATCGGCTTATATTCT+TGG | 0.209122 | 5_1:+48032838 | Msa0734280:CDS |
CTGAGGAAATCATCTTCTTT+TGG | 0.219994 | 5_1:+48034428 | Msa0734280:CDS |
CTCTTCATTGTGCGGTTGTT+GGG | 0.225881 | 5_1:+48032911 | Msa0734280:CDS |
AAAGTTGGTTCGAACAAATT+AGG | 0.237750 | 5_1:+48032766 | Msa0734280:CDS |
GGGCTCACCCGATGGAAATT+TGG | 0.238746 | 5_1:+48034373 | Msa0734280:CDS |
CTAGCTGCAGCTGGAGTTAA+AGG | 0.264190 | 5_1:-48034470 | None:intergenic |
GAGGATGCTACAAGCTCTTT+TGG | 0.287126 | 5_1:+48033068 | Msa0734280:CDS |
CAAGGGCTTATTCTCATGAT+TGG | 0.318225 | 5_1:+48033289 | Msa0734280:CDS |
ATACGACCGGGGAACTAAAT+AGG | 0.321029 | 5_1:+48033976 | Msa0734280:CDS |
GTGTCCCTTGTCCTGAGTTT+CGG | 0.340392 | 5_1:+48033382 | Msa0734280:CDS |
GCTCTTCATTGTGCGGTTGT+TGG | 0.359015 | 5_1:+48032910 | Msa0734280:CDS |
GATTCATATTCGGACGCATT+TGG | 0.363999 | 5_1:-48034133 | None:intergenic |
TGCAGATGCTGATTCATATT+CGG | 0.365840 | 5_1:-48034143 | None:intergenic |
ACGCCGCCTTTGACTTCATC+TGG | 0.368423 | 5_1:+48033693 | Msa0734280:CDS |
GTCTTTCCTCTCCTTCCAAC+TGG | 0.371979 | 5_1:+48033904 | Msa0734280:CDS |
CAATGGAACAGATTCGATTC+CGG | 0.374222 | 5_1:+48034619 | Msa0734280:CDS |
TATATAGTACCGATGAGTTT+AGG | 0.375544 | 5_1:+48033238 | Msa0734280:CDS |
TCCTGTGCCCTAGCTGCAGC+TGG | 0.377666 | 5_1:-48034479 | None:intergenic |
CCTTGGATTGAAGATAGAAT+TGG | 0.386827 | 5_1:-48033043 | None:intergenic |
CTGCAACAAAACTATTCTTC+AGG | 0.389322 | 5_1:+48034161 | Msa0734280:CDS |
CGCCCCTTGTATGCTTCTAC+CGG | 0.390009 | 5_1:+48033558 | Msa0734280:CDS |
GATGGGGTTGGTTTGTGGTA+TGG | 0.391400 | 5_1:+48032739 | Msa0734280:CDS |
AGCAAAATCTTGATAATCTC+GGG | 0.396619 | 5_1:-48032949 | None:intergenic |
CATTCCACTTCTAGTGTGAT+TGG | 0.397045 | 5_1:+48034185 | Msa0734280:CDS |
CACATGGCTGCAGCAGCAAC+GGG | 0.402327 | 5_1:-48033726 | None:intergenic |
ATTCAGATATTGCAATGCTT+AGG | 0.408619 | 5_1:+48033832 | Msa0734280:CDS |
AAAATGTCTTCAAGGTTTGT+AGG | 0.409953 | 5_1:-48034014 | None:intergenic |
TGGAATTTATGCAACATTGA+TGG | 0.416189 | 5_1:-48034050 | None:intergenic |
ACCTATAGGTTTGATCCATC+TGG | 0.416807 | 5_1:+48034215 | Msa0734280:CDS |
TTGGGTTAATTCACTTGTAA+AGG | 0.417539 | 5_1:+48034526 | Msa0734280:CDS |
TTCAGATATTGCAATGCTTA+GGG | 0.419562 | 5_1:+48033833 | Msa0734280:CDS |
TCGGCTTATATTCTTGGAAC+AGG | 0.420142 | 5_1:+48032844 | Msa0734280:CDS |
TTGTCAAAAGGATTTGATCA+TGG | 0.420181 | 5_1:+48032591 | Msa0734280:CDS |
TGATTGGATCGCCGACCTAT+AGG | 0.422967 | 5_1:+48034201 | Msa0734280:CDS |
TATATCCCATTCTTAATGTC+TGG | 0.426530 | 5_1:-48033219 | None:intergenic |
CTCATGGTTGCAGCTATGTA+TGG | 0.426552 | 5_1:+48032808 | Msa0734280:CDS |
GCTTGTAGCATCCTCTTCCT+TGG | 0.429452 | 5_1:-48033060 | None:intergenic |
TCAAAGTGAAGCCTTGTTCA+AGG | 0.431149 | 5_1:+48033271 | Msa0734280:CDS |
AAGCAAAATCTTGATAATCT+CGG | 0.433411 | 5_1:-48032950 | None:intergenic |
CTTGATGCTGCAGGAGCAGC+AGG | 0.434896 | 5_1:+48034083 | Msa0734280:CDS |
GAGACCCGAAAATGTCTTCA+AGG | 0.438096 | 5_1:-48034022 | None:intergenic |
CTTATATTCTTGGAACAGGT+CGG | 0.443594 | 5_1:+48032848 | Msa0734280:CDS |
ATGTTGATGGGGTTGGTTTG+TGG | 0.450945 | 5_1:+48032734 | Msa0734280:CDS |
GAGTGTCCCTTTGTTCATCC+AGG | 0.455762 | 5_1:+48033315 | Msa0734280:CDS |
GGTTGCGATGTTGATGGGGT+TGG | 0.455769 | 5_1:+48032727 | Msa0734280:CDS |
CACCCGATGGAAATTTGGAT+TGG | 0.458700 | 5_1:+48034378 | Msa0734280:CDS |
AGCGAAACAATCAAATCAAC+TGG | 0.459199 | 5_1:-48033018 | None:intergenic |
AATCTGTTCCATTGTTAAGA+TGG | 0.459769 | 5_1:-48034610 | None:intergenic |
AGTTGATTTGATTGTTTCGC+TGG | 0.460352 | 5_1:+48033020 | Msa0734280:CDS |
CCACATGGCTGCAGCAGCAA+CGG | 0.462166 | 5_1:-48033727 | None:intergenic |
CAGCTATAATGATATTTCCT+TGG | 0.464131 | 5_1:-48033360 | None:intergenic |
TGTCAAAAGGATTTGATCAT+GGG | 0.468107 | 5_1:+48032592 | Msa0734280:CDS |
CTTCTTTGCTCACAAGGTCG+AGG | 0.469734 | 5_1:+48033530 | Msa0734280:CDS |
ACGAGGGTTGCGATGTTGAT+GGG | 0.471244 | 5_1:+48032722 | Msa0734280:CDS |
TCTCTTCCAGACATTAAGAA+TGG | 0.478120 | 5_1:+48033213 | Msa0734280:CDS |
AGAATTTCACTTGATGCTGC+AGG | 0.479378 | 5_1:+48034074 | Msa0734280:CDS |
CTTTAACTCCAGCTGCAGCT+AGG | 0.479692 | 5_1:+48034471 | Msa0734280:CDS |
GGAGCAATTGTACATGGATC+AGG | 0.480663 | 5_1:+48034649 | Msa0734280:CDS |
CTCTTCCAGACATTAAGAAT+GGG | 0.482849 | 5_1:+48033214 | Msa0734280:CDS |
GCAGTACTGTAATACGATCT+AGG | 0.485377 | 5_1:-48033597 | None:intergenic |
TACTGCTTCTACATTAGAGA+TGG | 0.486960 | 5_1:+48033614 | Msa0734280:CDS |
TATGTGAATGGGAATAAAGA+AGG | 0.487426 | 5_1:+48032622 | Msa0734280:CDS |
CGGAAAGGATCGTGCAGTAA+AGG | 0.487429 | 5_1:+48033402 | Msa0734280:CDS |
AGATTCGATTCCGGCTTGGT+TGG | 0.488203 | 5_1:+48034628 | Msa0734280:CDS |
ACCGGAAAAGATGGACTGTT+AGG | 0.489839 | 5_1:-48033939 | None:intergenic |
AGCTGGAGTTAAAGGAGTAC+TGG | 0.489995 | 5_1:-48034462 | None:intergenic |
TTATATTCTTGGAACAGGTC+GGG | 0.491005 | 5_1:+48032849 | Msa0734280:CDS |
TCTTCATTGTGCGGTTGTTG+GGG | 0.492583 | 5_1:+48032912 | Msa0734280:CDS |
TTGTGGTATGGAAGGAAAGT+TGG | 0.493676 | 5_1:+48032751 | Msa0734280:CDS |
ATGGGGTGTGAGTATGTGAA+TGG | 0.494445 | 5_1:+48032610 | Msa0734280:CDS |
GTTGAAGAAACCGGAAAAGA+TGG | 0.494753 | 5_1:-48033948 | None:intergenic |
CAGGTCGGGTTGATGTTAAT+CGG | 0.495738 | 5_1:+48032863 | Msa0734280:CDS |
GTATGGAAGCTTGGATGTAT+CGG | 0.499389 | 5_1:+48032825 | Msa0734280:CDS |
CACTGCGCTCGATAAAGCTC+TGG | 0.499905 | 5_1:-48034292 | None:intergenic |
TCTGGAAGAGAGACATCAAC+AGG | 0.501027 | 5_1:-48033201 | None:intergenic |
TTTAACTCCAGCTGCAGCTA+GGG | 0.502176 | 5_1:+48034472 | Msa0734280:CDS |
TATTTAGTTCCCCGGTCGTA+TGG | 0.502935 | 5_1:-48033974 | None:intergenic |
AGGAGATGGAATAGCAGAAC+CGG | 0.503649 | 5_1:-48033577 | None:intergenic |
TCTCAGTTACAATCTCCAAC+TGG | 0.504676 | 5_1:+48034107 | Msa0734280:CDS |
GTATGGTTGGTTGAAGAAAC+CGG | 0.504960 | 5_1:-48033957 | None:intergenic |
ATGGAGAACCAAGTGACATT+GGG | 0.506623 | 5_1:-48033647 | None:intergenic |
GGACGCATTTGGATTCCAGT+TGG | 0.507506 | 5_1:-48034122 | None:intergenic |
CTATGAACCAGATGTGTCTT+GGG | 0.508226 | 5_1:+48034508 | Msa0734280:CDS |
TCCAGCTGCAGCTAGGGCAC+AGG | 0.510410 | 5_1:+48034478 | Msa0734280:CDS |
ACACGGCTTTGCAAGGATGA+AGG | 0.512844 | 5_1:+48033486 | Msa0734280:CDS |
TGCAGCTATGTATGGAAGCT+TGG | 0.514902 | 5_1:+48032816 | Msa0734280:CDS |
GAATTAACCCAAGACACATC+TGG | 0.517792 | 5_1:-48034515 | None:intergenic |
CAAAGTGAAGCCTTGTTCAA+GGG | 0.517860 | 5_1:+48033272 | Msa0734280:CDS |
ATGCAAGGCGACGCGATCCA+AGG | 0.519136 | 5_1:+48033343 | Msa0734280:CDS |
TTAGCGTTGAAGATCAGAAA+AGG | 0.521469 | 5_1:+48034576 | Msa0734280:CDS |
GATGGAGAACCAAGTGACAT+TGG | 0.523747 | 5_1:-48033648 | None:intergenic |
AACGAGGGTTGCGATGTTGA+TGG | 0.524302 | 5_1:+48032721 | Msa0734280:CDS |
CGAAAACCTATTTAGTTCCC+CGG | 0.524607 | 5_1:-48033982 | None:intergenic |
TCTTCAACCAACCATACGAC+CGG | 0.524754 | 5_1:+48033963 | Msa0734280:CDS |
GAACAGATTCGATTCCGGCT+TGG | 0.527010 | 5_1:+48034624 | Msa0734280:CDS |
TCAATTAGCCCAATGTCACT+TGG | 0.534086 | 5_1:+48033639 | Msa0734280:CDS |
GTCCAATCCAAATTTCCATC+GGG | 0.538779 | 5_1:-48034380 | None:intergenic |
TAGTTCCCCGGTCGTATGGT+TGG | 0.539752 | 5_1:-48033970 | None:intergenic |
TTGGTTGGAGCAATTGTACA+TGG | 0.540592 | 5_1:+48034643 | Msa0734280:CDS |
ACTATGAACCAGATGTGTCT+TGG | 0.542920 | 5_1:+48034507 | Msa0734280:CDS |
CGATCCAATCACACTAGAAG+TGG | 0.543683 | 5_1:-48034189 | None:intergenic |
ACTGCTTCTACATTAGAGAT+GGG | 0.544371 | 5_1:+48033615 | Msa0734280:CDS |
TACAATTGCTCCAACCAAGC+CGG | 0.546247 | 5_1:-48034638 | None:intergenic |
GTCAAAGGCGGCGTTGAGGA+GGG | 0.547086 | 5_1:-48033684 | None:intergenic |
CTATCTTCAATCCAAGGAAG+AGG | 0.548194 | 5_1:+48033049 | Msa0734280:CDS |
AGTTTGCTTCTTTGCTCACA+AGG | 0.549883 | 5_1:+48033524 | Msa0734280:CDS |
CACGATCCTTTCCGAAACTC+AGG | 0.550059 | 5_1:-48033393 | None:intergenic |
GCGAAAGCAGCAACTACTGA+TGG | 0.552696 | 5_1:+48033869 | Msa0734280:CDS |
CTTCAACCAACCATACGACC+GGG | 0.553306 | 5_1:+48033964 | Msa0734280:CDS |
CTGTAATACGATCTAGGAGA+TGG | 0.556774 | 5_1:-48033591 | None:intergenic |
TCCAGATGGATCAAACCTAT+AGG | 0.559606 | 5_1:-48034216 | None:intergenic |
CCAATTCTATCTTCAATCCA+AGG | 0.560551 | 5_1:+48033043 | Msa0734280:CDS |
TCTAACTGGGGCTCACCCGA+TGG | 0.560712 | 5_1:+48034365 | Msa0734280:CDS |
AGCCGTGTCTTATACTGCGC+AGG | 0.561388 | 5_1:-48033471 | None:intergenic |
AGTCAAAGGCGGCGTTGAGG+AGG | 0.561805 | 5_1:-48033685 | None:intergenic |
TCAATGTCATCAATTGTCTC+CGG | 0.563566 | 5_1:-48033129 | None:intergenic |
TTCATCCAGGGGAAAATGCA+AGG | 0.563820 | 5_1:+48033328 | Msa0734280:CDS |
AGAACCGGTAGAAGCATACA+AGG | 0.565045 | 5_1:-48033562 | None:intergenic |
CTACTGATGGATGAGATGTC+CGG | 0.565792 | 5_1:+48033882 | Msa0734280:CDS |
CCCAAAAGCAGATTGAAGAC+TGG | 0.566689 | 5_1:+48033789 | Msa0734280:CDS |
GGGTTGGTTTGTGGTATGGA+AGG | 0.567780 | 5_1:+48032743 | Msa0734280:CDS |
GTTGATGTTAATCGGTCTAG+TGG | 0.567818 | 5_1:+48032871 | Msa0734280:CDS |
TCAGCTGCAGATGATGTGGT+TGG | 0.573637 | 5_1:+48032679 | Msa0734280:CDS |
GAGGGTGGTATCAAAACAGA+TGG | 0.574942 | 5_1:-48033666 | None:intergenic |
TGAAGAGAGGACACCTCTCA+TGG | 0.576333 | 5_1:+48032792 | Msa0734280:CDS |
ACAAATTAGGTTATGAAGAG+AGG | 0.576520 | 5_1:+48032779 | Msa0734280:CDS |
AGTGTCCCTTTGTTCATCCA+GGG | 0.576667 | 5_1:+48033316 | Msa0734280:CDS |
ATGGAATGATTCCAGTTGGA+AGG | 0.579291 | 5_1:-48033915 | None:intergenic |
CCTTTCCGAAACTCAGGACA+AGG | 0.580350 | 5_1:-48033387 | None:intergenic |
GTATAAGACACGGCTTTGCA+AGG | 0.581068 | 5_1:+48033479 | Msa0734280:CDS |
GTTGGAAGGAGAGGAAAGAC+CGG | 0.583195 | 5_1:-48033901 | None:intergenic |
ATGATTCCAGTTGGAAGGAG+AGG | 0.583775 | 5_1:-48033910 | None:intergenic |
GACGCGGATAACTCTCCAGA+TGG | 0.585826 | 5_1:-48034230 | None:intergenic |
AGTCCAATCCAAATTTCCAT+CGG | 0.586204 | 5_1:-48034381 | None:intergenic |
ATGAAGAGCAGTAGCACCAT+CGG | 0.586647 | 5_1:-48032896 | None:intergenic |
ATGTGAATGGGAATAAAGAA+GGG | 0.588204 | 5_1:+48032623 | Msa0734280:CDS |
CCTTGTCCTGAGTTTCGGAA+AGG | 0.590059 | 5_1:+48033387 | Msa0734280:CDS |
AGGCATGGAATGATTCCAGT+TGG | 0.590112 | 5_1:-48033919 | None:intergenic |
CCGTTGCTGCTGCAGCCATG+TGG | 0.592506 | 5_1:+48033727 | Msa0734280:CDS |
CAATCACACTAGAAGTGGAA+TGG | 0.595527 | 5_1:-48034184 | None:intergenic |
ATCAACTGGTCGGTTACCGT+TGG | 0.595630 | 5_1:-48033004 | None:intergenic |
ATCTGAATTAATATCTCTAG+CGG | 0.595917 | 5_1:-48033817 | None:intergenic |
TGGGGTGTGAGTATGTGAAT+GGG | 0.600624 | 5_1:+48032611 | Msa0734280:CDS |
ATGACATTGACGAATATCAA+AGG | 0.602422 | 5_1:+48033142 | Msa0734280:CDS |
AATTTGGATTGGACTTCACA+CGG | 0.603583 | 5_1:+48034389 | Msa0734280:CDS |
CAGCATCAAGTGAAATTCTG+TGG | 0.605687 | 5_1:-48034070 | None:intergenic |
TGCTACTGCTCTTCATTGTG+CGG | 0.605703 | 5_1:+48032903 | Msa0734280:CDS |
GAGAATGAAGCTCAGAATGA+CGG | 0.613447 | 5_1:-48034322 | None:intergenic |
AAAAGATGGACTGTTAGGCA+TGG | 0.613610 | 5_1:-48033934 | None:intergenic |
ATCTGGAGAGTTATCCGCGT+CGG | 0.616369 | 5_1:+48034232 | Msa0734280:CDS |
TGGATGAACAAAGGGACACT+CGG | 0.617153 | 5_1:-48033313 | None:intergenic |
AATCGGTCTAGTGGATCCGA+TGG | 0.617627 | 5_1:+48032880 | Msa0734280:CDS |
CTGCAGCGCCATCTTAACAA+TGG | 0.619796 | 5_1:+48034602 | Msa0734280:CDS |
TGTATACATCCTAAACTCAT+CGG | 0.621538 | 5_1:-48033247 | None:intergenic |
TACATAGCTGCAACCATGAG+AGG | 0.624576 | 5_1:-48032805 | None:intergenic |
GCAAAATCTTGATAATCTCG+GGG | 0.625212 | 5_1:-48032948 | None:intergenic |
TGAGAATAAGCCCTTGAACA+AGG | 0.627841 | 5_1:-48033282 | None:intergenic |
GTCAAAAGGATTTGATCATG+GGG | 0.630254 | 5_1:+48032593 | Msa0734280:CDS |
GTGTCCCTTTGTTCATCCAG+GGG | 0.633464 | 5_1:+48033317 | Msa0734280:CDS |
CGAGGGTTGCGATGTTGATG+GGG | 0.634282 | 5_1:+48032723 | Msa0734280:CDS |
CTTCATTGTGCGGTTGTTGG+GGG | 0.635961 | 5_1:+48032913 | Msa0734280:CDS |
GATGCTCCAGATGAAGTCAA+AGG | 0.639371 | 5_1:-48033699 | None:intergenic |
GATGGATCAAACCTATAGGT+CGG | 0.639738 | 5_1:-48034212 | None:intergenic |
AAACAATCAAATCAACTGGT+CGG | 0.641933 | 5_1:-48033014 | None:intergenic |
CTAAACTGATGAGATTCTTG+CGG | 0.647291 | 5_1:-48034557 | None:intergenic |
AAAGGCGGCGTTGAGGAGGG+TGG | 0.647882 | 5_1:-48033681 | None:intergenic |
GCTAGTGCTGTTGATGCCAA+CGG | 0.653244 | 5_1:+48032988 | Msa0734280:CDS |
ATTAGACGGTGTCTGCCACA+TGG | 0.653248 | 5_1:-48033742 | None:intergenic |
TAAAGAAGGGCAGTATCATG+AGG | 0.655064 | 5_1:+48032636 | Msa0734280:CDS |
TGGAGTTAAAGGAGTACTGG+TGG | 0.655843 | 5_1:-48034459 | None:intergenic |
TGAAGTCAAAGGCGGCGTTG+AGG | 0.657176 | 5_1:-48033688 | None:intergenic |
TTCAACCAACCATACGACCG+GGG | 0.664294 | 5_1:+48033965 | Msa0734280:CDS |
GAGAAGAACTGAATAAGCTG+AGG | 0.666361 | 5_1:+48034411 | Msa0734280:CDS |
TGCTTAGGGTTGAAACTCAG+CGG | 0.673294 | 5_1:+48033847 | Msa0734280:CDS |
AACCGGTAGAAGCATACAAG+GGG | 0.673738 | 5_1:-48033560 | None:intergenic |
GAACCGGTAGAAGCATACAA+GGG | 0.683674 | 5_1:-48033561 | None:intergenic |
ATCCTGCGCAGTATAAGACA+CGG | 0.689588 | 5_1:+48033469 | Msa0734280:CDS |
CAAAATCTTGATAATCTCGG+GGG | 0.705772 | 5_1:-48032947 | None:intergenic |
TCTTGCATTCAAAGCCGACG+CGG | 0.707580 | 5_1:-48034246 | None:intergenic |
GATTCTTGTGACTATGCACA+CGG | 0.716065 | 5_1:+48033426 | Msa0734280:CDS |
CTTTCCGAAACTCAGGACAA+GGG | 0.724035 | 5_1:-48033386 | None:intergenic |
GTAGGGATCGAAACATTAGA+CGG | 0.728881 | 5_1:-48033756 | None:intergenic |
GCTCCAGATGAAGTCAAAGG+CGG | 0.734283 | 5_1:-48033696 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAAGAAAAAAACTTGTCAAA+AGG | + | chr5_1:48032579-48032598 | Msa0734280:CDS | 20.0% |
!! | TAAGAAAAAAACTTGTCAAA+AGG | + | chr5_1:48032579-48032598 | Msa0734280:CDS | 20.0% |
!! | AAGCAAAATCTTGATAATCT+CGG | - | chr5_1:48032953-48032972 | None:intergenic | 25.0% |
! | ATCTGAATTAATATCTCTAG+CGG | - | chr5_1:48033820-48033839 | None:intergenic | 25.0% |
!! | AAGCAAAATCTTGATAATCT+CGG | - | chr5_1:48032953-48032972 | None:intergenic | 25.0% |
! | ATCTGAATTAATATCTCTAG+CGG | - | chr5_1:48033820-48033839 | None:intergenic | 25.0% |
TTGTCAAAAGGATTTGATCA+TGG | + | chr5_1:48032591-48032610 | Msa0734280:CDS | 30.0% | |
TGTCAAAAGGATTTGATCAT+GGG | + | chr5_1:48032592-48032611 | Msa0734280:CDS | 30.0% | |
TATGTGAATGGGAATAAAGA+AGG | + | chr5_1:48032622-48032641 | Msa0734280:CDS | 30.0% | |
ATGTGAATGGGAATAAAGAA+GGG | + | chr5_1:48032623-48032642 | Msa0734280:CDS | 30.0% | |
AAAAAATGCGATTGAAAACG+AGG | + | chr5_1:48032705-48032724 | Msa0734280:CDS | 30.0% | |
AAAAATGCGATTGAAAACGA+GGG | + | chr5_1:48032706-48032725 | Msa0734280:CDS | 30.0% | |
!! | AAAGTTGGTTCGAACAAATT+AGG | + | chr5_1:48032766-48032785 | Msa0734280:CDS | 30.0% |
ACAAATTAGGTTATGAAGAG+AGG | + | chr5_1:48032779-48032798 | Msa0734280:CDS | 30.0% | |
! | AGCAAAATCTTGATAATCTC+GGG | - | chr5_1:48032952-48032971 | None:intergenic | 30.0% |
AAACAATCAAATCAACTGGT+CGG | - | chr5_1:48033017-48033036 | None:intergenic | 30.0% | |
ATGACATTGACGAATATCAA+AGG | + | chr5_1:48033142-48033161 | Msa0734280:CDS | 30.0% | |
TATATCCCATTCTTAATGTC+TGG | - | chr5_1:48033222-48033241 | None:intergenic | 30.0% | |
!! | TATATAGTACCGATGAGTTT+AGG | + | chr5_1:48033238-48033257 | Msa0734280:CDS | 30.0% |
TGTATACATCCTAAACTCAT+CGG | - | chr5_1:48033250-48033269 | None:intergenic | 30.0% | |
CAGCTATAATGATATTTCCT+TGG | - | chr5_1:48033363-48033382 | None:intergenic | 30.0% | |
ATTCAGATATTGCAATGCTT+AGG | + | chr5_1:48033832-48033851 | Msa0734280:CDS | 30.0% | |
TTCAGATATTGCAATGCTTA+GGG | + | chr5_1:48033833-48033852 | Msa0734280:CDS | 30.0% | |
AAAATGTCTTCAAGGTTTGT+AGG | - | chr5_1:48034017-48034036 | None:intergenic | 30.0% | |
! | ACAAACCTTGAAGACATTTT+CGG | + | chr5_1:48034017-48034036 | Msa0734280:CDS | 30.0% |
TGGAATTTATGCAACATTGA+TGG | - | chr5_1:48034053-48034072 | None:intergenic | 30.0% | |
TTGGGTTAATTCACTTGTAA+AGG | + | chr5_1:48034526-48034545 | Msa0734280:CDS | 30.0% | |
AATCTGTTCCATTGTTAAGA+TGG | - | chr5_1:48034613-48034632 | None:intergenic | 30.0% | |
TTGTCAAAAGGATTTGATCA+TGG | + | chr5_1:48032591-48032610 | Msa0734280:CDS | 30.0% | |
TGTCAAAAGGATTTGATCAT+GGG | + | chr5_1:48032592-48032611 | Msa0734280:CDS | 30.0% | |
TATGTGAATGGGAATAAAGA+AGG | + | chr5_1:48032622-48032641 | Msa0734280:CDS | 30.0% | |
ATGTGAATGGGAATAAAGAA+GGG | + | chr5_1:48032623-48032642 | Msa0734280:CDS | 30.0% | |
AAAAAATGCGATTGAAAACG+AGG | + | chr5_1:48032705-48032724 | Msa0734280:CDS | 30.0% | |
AAAAATGCGATTGAAAACGA+GGG | + | chr5_1:48032706-48032725 | Msa0734280:CDS | 30.0% | |
!! | AAAGTTGGTTCGAACAAATT+AGG | + | chr5_1:48032766-48032785 | Msa0734280:CDS | 30.0% |
ACAAATTAGGTTATGAAGAG+AGG | + | chr5_1:48032779-48032798 | Msa0734280:CDS | 30.0% | |
! | AGCAAAATCTTGATAATCTC+GGG | - | chr5_1:48032952-48032971 | None:intergenic | 30.0% |
AAACAATCAAATCAACTGGT+CGG | - | chr5_1:48033017-48033036 | None:intergenic | 30.0% | |
ATGACATTGACGAATATCAA+AGG | + | chr5_1:48033142-48033161 | Msa0734280:CDS | 30.0% | |
TATATCCCATTCTTAATGTC+TGG | - | chr5_1:48033222-48033241 | None:intergenic | 30.0% | |
!! | TATATAGTACCGATGAGTTT+AGG | + | chr5_1:48033238-48033257 | Msa0734280:CDS | 30.0% |
TGTATACATCCTAAACTCAT+CGG | - | chr5_1:48033250-48033269 | None:intergenic | 30.0% | |
CAGCTATAATGATATTTCCT+TGG | - | chr5_1:48033363-48033382 | None:intergenic | 30.0% | |
ATTCAGATATTGCAATGCTT+AGG | + | chr5_1:48033832-48033851 | Msa0734280:CDS | 30.0% | |
TTCAGATATTGCAATGCTTA+GGG | + | chr5_1:48033833-48033852 | Msa0734280:CDS | 30.0% | |
AAAATGTCTTCAAGGTTTGT+AGG | - | chr5_1:48034017-48034036 | None:intergenic | 30.0% | |
! | ACAAACCTTGAAGACATTTT+CGG | + | chr5_1:48034017-48034036 | Msa0734280:CDS | 30.0% |
TGGAATTTATGCAACATTGA+TGG | - | chr5_1:48034053-48034072 | None:intergenic | 30.0% | |
TTGGGTTAATTCACTTGTAA+AGG | + | chr5_1:48034526-48034545 | Msa0734280:CDS | 30.0% | |
AATCTGTTCCATTGTTAAGA+TGG | - | chr5_1:48034613-48034632 | None:intergenic | 30.0% | |
GTCAAAAGGATTTGATCATG+GGG | + | chr5_1:48032593-48032612 | Msa0734280:CDS | 35.0% | |
!! | GATGTATCGGCTTATATTCT+TGG | + | chr5_1:48032838-48032857 | Msa0734280:CDS | 35.0% |
CTTATATTCTTGGAACAGGT+CGG | + | chr5_1:48032848-48032867 | Msa0734280:CDS | 35.0% | |
TTATATTCTTGGAACAGGTC+GGG | + | chr5_1:48032849-48032868 | Msa0734280:CDS | 35.0% | |
! | CAAAATCTTGATAATCTCGG+GGG | - | chr5_1:48032950-48032969 | None:intergenic | 35.0% |
! | GCAAAATCTTGATAATCTCG+GGG | - | chr5_1:48032951-48032970 | None:intergenic | 35.0% |
! | CAAGATTTTGCTTGATGCAT+CGG | + | chr5_1:48032960-48032979 | Msa0734280:CDS | 35.0% |
AGCGAAACAATCAAATCAAC+TGG | - | chr5_1:48033021-48033040 | None:intergenic | 35.0% | |
!! | AGTTGATTTGATTGTTTCGC+TGG | + | chr5_1:48033020-48033039 | Msa0734280:CDS | 35.0% |
CCTTGGATTGAAGATAGAAT+TGG | - | chr5_1:48033046-48033065 | None:intergenic | 35.0% | |
CCAATTCTATCTTCAATCCA+AGG | + | chr5_1:48033043-48033062 | Msa0734280:CDS | 35.0% | |
TCAATGTCATCAATTGTCTC+CGG | - | chr5_1:48033132-48033151 | None:intergenic | 35.0% | |
!!! | GGATAATCTTTTGAAACACG+AGG | - | chr5_1:48033183-48033202 | None:intergenic | 35.0% |
TCTCTTCCAGACATTAAGAA+TGG | + | chr5_1:48033213-48033232 | Msa0734280:CDS | 35.0% | |
CTCTTCCAGACATTAAGAAT+GGG | + | chr5_1:48033214-48033233 | Msa0734280:CDS | 35.0% | |
TACTGCTTCTACATTAGAGA+TGG | + | chr5_1:48033614-48033633 | Msa0734280:CDS | 35.0% | |
ACTGCTTCTACATTAGAGAT+GGG | + | chr5_1:48033615-48033634 | Msa0734280:CDS | 35.0% | |
! | CAAACCTTGAAGACATTTTC+GGG | + | chr5_1:48034018-48034037 | Msa0734280:CDS | 35.0% |
!! | TGCAGATGCTGATTCATATT+CGG | - | chr5_1:48034146-48034165 | None:intergenic | 35.0% |
CTGCAACAAAACTATTCTTC+AGG | + | chr5_1:48034161-48034180 | Msa0734280:CDS | 35.0% | |
!!! | AGCCTTATGCTTTTTCTAAC+TGG | + | chr5_1:48034351-48034370 | Msa0734280:CDS | 35.0% |
!!! | GCCTTATGCTTTTTCTAACT+GGG | + | chr5_1:48034352-48034371 | Msa0734280:CDS | 35.0% |
!!! | CCTTATGCTTTTTCTAACTG+GGG | + | chr5_1:48034353-48034372 | Msa0734280:CDS | 35.0% |
AGTCCAATCCAAATTTCCAT+CGG | - | chr5_1:48034384-48034403 | None:intergenic | 35.0% | |
! | AATTTGGATTGGACTTCACA+CGG | + | chr5_1:48034389-48034408 | Msa0734280:CDS | 35.0% |
! | CTGAGGAAATCATCTTCTTT+TGG | + | chr5_1:48034428-48034447 | Msa0734280:CDS | 35.0% |
CTAAACTGATGAGATTCTTG+CGG | - | chr5_1:48034560-48034579 | None:intergenic | 35.0% | |
! | TTAGCGTTGAAGATCAGAAA+AGG | + | chr5_1:48034576-48034595 | Msa0734280:CDS | 35.0% |
GTCAAAAGGATTTGATCATG+GGG | + | chr5_1:48032593-48032612 | Msa0734280:CDS | 35.0% | |
!! | GATGTATCGGCTTATATTCT+TGG | + | chr5_1:48032838-48032857 | Msa0734280:CDS | 35.0% |
CTTATATTCTTGGAACAGGT+CGG | + | chr5_1:48032848-48032867 | Msa0734280:CDS | 35.0% | |
TTATATTCTTGGAACAGGTC+GGG | + | chr5_1:48032849-48032868 | Msa0734280:CDS | 35.0% | |
! | CAAAATCTTGATAATCTCGG+GGG | - | chr5_1:48032950-48032969 | None:intergenic | 35.0% |
! | GCAAAATCTTGATAATCTCG+GGG | - | chr5_1:48032951-48032970 | None:intergenic | 35.0% |
! | CAAGATTTTGCTTGATGCAT+CGG | + | chr5_1:48032960-48032979 | Msa0734280:CDS | 35.0% |
AGCGAAACAATCAAATCAAC+TGG | - | chr5_1:48033021-48033040 | None:intergenic | 35.0% | |
!! | AGTTGATTTGATTGTTTCGC+TGG | + | chr5_1:48033020-48033039 | Msa0734280:CDS | 35.0% |
CCTTGGATTGAAGATAGAAT+TGG | - | chr5_1:48033046-48033065 | None:intergenic | 35.0% | |
CCAATTCTATCTTCAATCCA+AGG | + | chr5_1:48033043-48033062 | Msa0734280:CDS | 35.0% | |
TCAATGTCATCAATTGTCTC+CGG | - | chr5_1:48033132-48033151 | None:intergenic | 35.0% | |
!!! | GGATAATCTTTTGAAACACG+AGG | - | chr5_1:48033183-48033202 | None:intergenic | 35.0% |
TCTCTTCCAGACATTAAGAA+TGG | + | chr5_1:48033213-48033232 | Msa0734280:CDS | 35.0% | |
CTCTTCCAGACATTAAGAAT+GGG | + | chr5_1:48033214-48033233 | Msa0734280:CDS | 35.0% | |
TACTGCTTCTACATTAGAGA+TGG | + | chr5_1:48033614-48033633 | Msa0734280:CDS | 35.0% | |
ACTGCTTCTACATTAGAGAT+GGG | + | chr5_1:48033615-48033634 | Msa0734280:CDS | 35.0% | |
! | CAAACCTTGAAGACATTTTC+GGG | + | chr5_1:48034018-48034037 | Msa0734280:CDS | 35.0% |
!! | TGCAGATGCTGATTCATATT+CGG | - | chr5_1:48034146-48034165 | None:intergenic | 35.0% |
CTGCAACAAAACTATTCTTC+AGG | + | chr5_1:48034161-48034180 | Msa0734280:CDS | 35.0% | |
!!! | AGCCTTATGCTTTTTCTAAC+TGG | + | chr5_1:48034351-48034370 | Msa0734280:CDS | 35.0% |
!!! | GCCTTATGCTTTTTCTAACT+GGG | + | chr5_1:48034352-48034371 | Msa0734280:CDS | 35.0% |
!!! | CCTTATGCTTTTTCTAACTG+GGG | + | chr5_1:48034353-48034372 | Msa0734280:CDS | 35.0% |
AGTCCAATCCAAATTTCCAT+CGG | - | chr5_1:48034384-48034403 | None:intergenic | 35.0% | |
! | AATTTGGATTGGACTTCACA+CGG | + | chr5_1:48034389-48034408 | Msa0734280:CDS | 35.0% |
! | CTGAGGAAATCATCTTCTTT+TGG | + | chr5_1:48034428-48034447 | Msa0734280:CDS | 35.0% |
CTAAACTGATGAGATTCTTG+CGG | - | chr5_1:48034560-48034579 | None:intergenic | 35.0% | |
! | TTAGCGTTGAAGATCAGAAA+AGG | + | chr5_1:48034576-48034595 | Msa0734280:CDS | 35.0% |
TAAAGAAGGGCAGTATCATG+AGG | + | chr5_1:48032636-48032655 | Msa0734280:CDS | 40.0% | |
! | ATTTTCAGCTGCAGATGATG+TGG | + | chr5_1:48032675-48032694 | Msa0734280:CDS | 40.0% |
TTGTGGTATGGAAGGAAAGT+TGG | + | chr5_1:48032751-48032770 | Msa0734280:CDS | 40.0% | |
GTATGGAAGCTTGGATGTAT+CGG | + | chr5_1:48032825-48032844 | Msa0734280:CDS | 40.0% | |
TCGGCTTATATTCTTGGAAC+AGG | + | chr5_1:48032844-48032863 | Msa0734280:CDS | 40.0% | |
GTTGATGTTAATCGGTCTAG+TGG | + | chr5_1:48032871-48032890 | Msa0734280:CDS | 40.0% | |
CTATCTTCAATCCAAGGAAG+AGG | + | chr5_1:48033049-48033068 | Msa0734280:CDS | 40.0% | |
! | ATGCTACAAGCTCTTTTGGA+TGG | + | chr5_1:48033072-48033091 | Msa0734280:CDS | 40.0% |
TCAGACATGTCTTCTGTTTC+CGG | + | chr5_1:48033110-48033129 | Msa0734280:CDS | 40.0% | |
!! | TCAAAGTGAAGCCTTGTTCA+AGG | + | chr5_1:48033271-48033290 | Msa0734280:CDS | 40.0% |
!! | CAAAGTGAAGCCTTGTTCAA+GGG | + | chr5_1:48033272-48033291 | Msa0734280:CDS | 40.0% |
TGAGAATAAGCCCTTGAACA+AGG | - | chr5_1:48033285-48033304 | None:intergenic | 40.0% | |
CAAGGGCTTATTCTCATGAT+TGG | + | chr5_1:48033289-48033308 | Msa0734280:CDS | 40.0% | |
! | TTTTCCCCTGGATGAACAAA+GGG | - | chr5_1:48033324-48033343 | None:intergenic | 40.0% |
! | ATTTTCCCCTGGATGAACAA+AGG | - | chr5_1:48033325-48033344 | None:intergenic | 40.0% |
GATTCTTGTGACTATGCACA+CGG | + | chr5_1:48033426-48033445 | Msa0734280:CDS | 40.0% | |
! | AGTTTGCTTCTTTGCTCACA+AGG | + | chr5_1:48033524-48033543 | Msa0734280:CDS | 40.0% |
CTGTAATACGATCTAGGAGA+TGG | - | chr5_1:48033594-48033613 | None:intergenic | 40.0% | |
GCAGTACTGTAATACGATCT+AGG | - | chr5_1:48033600-48033619 | None:intergenic | 40.0% | |
TCAATTAGCCCAATGTCACT+TGG | + | chr5_1:48033639-48033658 | Msa0734280:CDS | 40.0% | |
ATGGAGAACCAAGTGACATT+GGG | - | chr5_1:48033650-48033669 | None:intergenic | 40.0% | |
GTAGGGATCGAAACATTAGA+CGG | - | chr5_1:48033759-48033778 | None:intergenic | 40.0% | |
!! | CCAGTCTTCAATCTGCTTTT+GGG | - | chr5_1:48033792-48033811 | None:intergenic | 40.0% |
! | TCCAGTCTTCAATCTGCTTT+TGG | - | chr5_1:48033793-48033812 | None:intergenic | 40.0% |
ATGGAATGATTCCAGTTGGA+AGG | - | chr5_1:48033918-48033937 | None:intergenic | 40.0% | |
!! | AAAAGATGGACTGTTAGGCA+TGG | - | chr5_1:48033937-48033956 | None:intergenic | 40.0% |
GTTGAAGAAACCGGAAAAGA+TGG | - | chr5_1:48033951-48033970 | None:intergenic | 40.0% | |
! | GTATGGTTGGTTGAAGAAAC+CGG | - | chr5_1:48033960-48033979 | None:intergenic | 40.0% |
! | CGAAAACCTATTTAGTTCCC+CGG | - | chr5_1:48033985-48034004 | None:intergenic | 40.0% |
! | CGGGGAACTAAATAGGTTTT+CGG | + | chr5_1:48033983-48034002 | Msa0734280:CDS | 40.0% |
! | GGGGAACTAAATAGGTTTTC+GGG | + | chr5_1:48033984-48034003 | Msa0734280:CDS | 40.0% |
! | GGGAACTAAATAGGTTTTCG+GGG | + | chr5_1:48033985-48034004 | Msa0734280:CDS | 40.0% |
! | GGAACTAAATAGGTTTTCGG+GGG | + | chr5_1:48033986-48034005 | Msa0734280:CDS | 40.0% |
CAGCATCAAGTGAAATTCTG+TGG | - | chr5_1:48034073-48034092 | None:intergenic | 40.0% | |
AGAATTTCACTTGATGCTGC+AGG | + | chr5_1:48034074-48034093 | Msa0734280:CDS | 40.0% | |
TCTCAGTTACAATCTCCAAC+TGG | + | chr5_1:48034107-48034126 | Msa0734280:CDS | 40.0% | |
GATTCATATTCGGACGCATT+TGG | - | chr5_1:48034136-48034155 | None:intergenic | 40.0% | |
CAATCACACTAGAAGTGGAA+TGG | - | chr5_1:48034187-48034206 | None:intergenic | 40.0% | |
CATTCCACTTCTAGTGTGAT+TGG | + | chr5_1:48034185-48034204 | Msa0734280:CDS | 40.0% | |
GATGGATCAAACCTATAGGT+CGG | - | chr5_1:48034215-48034234 | None:intergenic | 40.0% | |
ACCTATAGGTTTGATCCATC+TGG | + | chr5_1:48034215-48034234 | Msa0734280:CDS | 40.0% | |
TCCAGATGGATCAAACCTAT+AGG | - | chr5_1:48034219-48034238 | None:intergenic | 40.0% | |
! | GAGCTGCTGCATTTTCAAAA+CGG | + | chr5_1:48034267-48034286 | Msa0734280:CDS | 40.0% |
GAGAATGAAGCTCAGAATGA+CGG | - | chr5_1:48034325-48034344 | None:intergenic | 40.0% | |
! | GAAAAAGCATAAGGCTTAGC+AGG | - | chr5_1:48034347-48034366 | None:intergenic | 40.0% |
! | CCCCAGTTAGAAAAAGCATA+AGG | - | chr5_1:48034356-48034375 | None:intergenic | 40.0% |
GTCCAATCCAAATTTCCATC+GGG | - | chr5_1:48034383-48034402 | None:intergenic | 40.0% | |
GAGAAGAACTGAATAAGCTG+AGG | + | chr5_1:48034411-48034430 | Msa0734280:CDS | 40.0% | |
ACTATGAACCAGATGTGTCT+TGG | + | chr5_1:48034507-48034526 | Msa0734280:CDS | 40.0% | |
CTATGAACCAGATGTGTCTT+GGG | + | chr5_1:48034508-48034527 | Msa0734280:CDS | 40.0% | |
GAATTAACCCAAGACACATC+TGG | - | chr5_1:48034518-48034537 | None:intergenic | 40.0% | |
CAATGGAACAGATTCGATTC+CGG | + | chr5_1:48034619-48034638 | Msa0734280:CDS | 40.0% | |
TTGGTTGGAGCAATTGTACA+TGG | + | chr5_1:48034643-48034662 | Msa0734280:CDS | 40.0% | |
TAAAGAAGGGCAGTATCATG+AGG | + | chr5_1:48032636-48032655 | Msa0734280:CDS | 40.0% | |
! | ATTTTCAGCTGCAGATGATG+TGG | + | chr5_1:48032675-48032694 | Msa0734280:CDS | 40.0% |
TTGTGGTATGGAAGGAAAGT+TGG | + | chr5_1:48032751-48032770 | Msa0734280:CDS | 40.0% | |
GTATGGAAGCTTGGATGTAT+CGG | + | chr5_1:48032825-48032844 | Msa0734280:CDS | 40.0% | |
TCGGCTTATATTCTTGGAAC+AGG | + | chr5_1:48032844-48032863 | Msa0734280:CDS | 40.0% | |
GTTGATGTTAATCGGTCTAG+TGG | + | chr5_1:48032871-48032890 | Msa0734280:CDS | 40.0% | |
CTATCTTCAATCCAAGGAAG+AGG | + | chr5_1:48033049-48033068 | Msa0734280:CDS | 40.0% | |
! | ATGCTACAAGCTCTTTTGGA+TGG | + | chr5_1:48033072-48033091 | Msa0734280:CDS | 40.0% |
TCAGACATGTCTTCTGTTTC+CGG | + | chr5_1:48033110-48033129 | Msa0734280:CDS | 40.0% | |
!! | TCAAAGTGAAGCCTTGTTCA+AGG | + | chr5_1:48033271-48033290 | Msa0734280:CDS | 40.0% |
!! | CAAAGTGAAGCCTTGTTCAA+GGG | + | chr5_1:48033272-48033291 | Msa0734280:CDS | 40.0% |
TGAGAATAAGCCCTTGAACA+AGG | - | chr5_1:48033285-48033304 | None:intergenic | 40.0% | |
CAAGGGCTTATTCTCATGAT+TGG | + | chr5_1:48033289-48033308 | Msa0734280:CDS | 40.0% | |
! | TTTTCCCCTGGATGAACAAA+GGG | - | chr5_1:48033324-48033343 | None:intergenic | 40.0% |
! | ATTTTCCCCTGGATGAACAA+AGG | - | chr5_1:48033325-48033344 | None:intergenic | 40.0% |
GATTCTTGTGACTATGCACA+CGG | + | chr5_1:48033426-48033445 | Msa0734280:CDS | 40.0% | |
! | AGTTTGCTTCTTTGCTCACA+AGG | + | chr5_1:48033524-48033543 | Msa0734280:CDS | 40.0% |
CTGTAATACGATCTAGGAGA+TGG | - | chr5_1:48033594-48033613 | None:intergenic | 40.0% | |
GCAGTACTGTAATACGATCT+AGG | - | chr5_1:48033600-48033619 | None:intergenic | 40.0% | |
TCAATTAGCCCAATGTCACT+TGG | + | chr5_1:48033639-48033658 | Msa0734280:CDS | 40.0% | |
ATGGAGAACCAAGTGACATT+GGG | - | chr5_1:48033650-48033669 | None:intergenic | 40.0% | |
GTAGGGATCGAAACATTAGA+CGG | - | chr5_1:48033759-48033778 | None:intergenic | 40.0% | |
!! | CCAGTCTTCAATCTGCTTTT+GGG | - | chr5_1:48033792-48033811 | None:intergenic | 40.0% |
! | TCCAGTCTTCAATCTGCTTT+TGG | - | chr5_1:48033793-48033812 | None:intergenic | 40.0% |
ATGGAATGATTCCAGTTGGA+AGG | - | chr5_1:48033918-48033937 | None:intergenic | 40.0% | |
!! | AAAAGATGGACTGTTAGGCA+TGG | - | chr5_1:48033937-48033956 | None:intergenic | 40.0% |
GTTGAAGAAACCGGAAAAGA+TGG | - | chr5_1:48033951-48033970 | None:intergenic | 40.0% | |
! | GTATGGTTGGTTGAAGAAAC+CGG | - | chr5_1:48033960-48033979 | None:intergenic | 40.0% |
! | CGAAAACCTATTTAGTTCCC+CGG | - | chr5_1:48033985-48034004 | None:intergenic | 40.0% |
! | CGGGGAACTAAATAGGTTTT+CGG | + | chr5_1:48033983-48034002 | Msa0734280:CDS | 40.0% |
! | GGGGAACTAAATAGGTTTTC+GGG | + | chr5_1:48033984-48034003 | Msa0734280:CDS | 40.0% |
! | GGGAACTAAATAGGTTTTCG+GGG | + | chr5_1:48033985-48034004 | Msa0734280:CDS | 40.0% |
! | GGAACTAAATAGGTTTTCGG+GGG | + | chr5_1:48033986-48034005 | Msa0734280:CDS | 40.0% |
CAGCATCAAGTGAAATTCTG+TGG | - | chr5_1:48034073-48034092 | None:intergenic | 40.0% | |
AGAATTTCACTTGATGCTGC+AGG | + | chr5_1:48034074-48034093 | Msa0734280:CDS | 40.0% | |
TCTCAGTTACAATCTCCAAC+TGG | + | chr5_1:48034107-48034126 | Msa0734280:CDS | 40.0% | |
GATTCATATTCGGACGCATT+TGG | - | chr5_1:48034136-48034155 | None:intergenic | 40.0% | |
CAATCACACTAGAAGTGGAA+TGG | - | chr5_1:48034187-48034206 | None:intergenic | 40.0% | |
CATTCCACTTCTAGTGTGAT+TGG | + | chr5_1:48034185-48034204 | Msa0734280:CDS | 40.0% | |
GATGGATCAAACCTATAGGT+CGG | - | chr5_1:48034215-48034234 | None:intergenic | 40.0% | |
ACCTATAGGTTTGATCCATC+TGG | + | chr5_1:48034215-48034234 | Msa0734280:CDS | 40.0% | |
TCCAGATGGATCAAACCTAT+AGG | - | chr5_1:48034219-48034238 | None:intergenic | 40.0% | |
! | GAGCTGCTGCATTTTCAAAA+CGG | + | chr5_1:48034267-48034286 | Msa0734280:CDS | 40.0% |
GAGAATGAAGCTCAGAATGA+CGG | - | chr5_1:48034325-48034344 | None:intergenic | 40.0% | |
! | GAAAAAGCATAAGGCTTAGC+AGG | - | chr5_1:48034347-48034366 | None:intergenic | 40.0% |
! | CCCCAGTTAGAAAAAGCATA+AGG | - | chr5_1:48034356-48034375 | None:intergenic | 40.0% |
GTCCAATCCAAATTTCCATC+GGG | - | chr5_1:48034383-48034402 | None:intergenic | 40.0% | |
GAGAAGAACTGAATAAGCTG+AGG | + | chr5_1:48034411-48034430 | Msa0734280:CDS | 40.0% | |
ACTATGAACCAGATGTGTCT+TGG | + | chr5_1:48034507-48034526 | Msa0734280:CDS | 40.0% | |
CTATGAACCAGATGTGTCTT+GGG | + | chr5_1:48034508-48034527 | Msa0734280:CDS | 40.0% | |
GAATTAACCCAAGACACATC+TGG | - | chr5_1:48034518-48034537 | None:intergenic | 40.0% | |
CAATGGAACAGATTCGATTC+CGG | + | chr5_1:48034619-48034638 | Msa0734280:CDS | 40.0% | |
TTGGTTGGAGCAATTGTACA+TGG | + | chr5_1:48034643-48034662 | Msa0734280:CDS | 40.0% | |
ATGGGGTGTGAGTATGTGAA+TGG | + | chr5_1:48032610-48032629 | Msa0734280:CDS | 45.0% | |
TGGGGTGTGAGTATGTGAAT+GGG | + | chr5_1:48032611-48032630 | Msa0734280:CDS | 45.0% | |
!! | ATGTTGATGGGGTTGGTTTG+TGG | + | chr5_1:48032734-48032753 | Msa0734280:CDS | 45.0% |
TACATAGCTGCAACCATGAG+AGG | - | chr5_1:48032808-48032827 | None:intergenic | 45.0% | |
CTCATGGTTGCAGCTATGTA+TGG | + | chr5_1:48032808-48032827 | Msa0734280:CDS | 45.0% | |
TGCAGCTATGTATGGAAGCT+TGG | + | chr5_1:48032816-48032835 | Msa0734280:CDS | 45.0% | |
!! | CAGGTCGGGTTGATGTTAAT+CGG | + | chr5_1:48032863-48032882 | Msa0734280:CDS | 45.0% |
ATGAAGAGCAGTAGCACCAT+CGG | - | chr5_1:48032899-48032918 | None:intergenic | 45.0% | |
TGCTACTGCTCTTCATTGTG+CGG | + | chr5_1:48032903-48032922 | Msa0734280:CDS | 45.0% | |
CTCTTCATTGTGCGGTTGTT+GGG | + | chr5_1:48032911-48032930 | Msa0734280:CDS | 45.0% | |
TCTTCATTGTGCGGTTGTTG+GGG | + | chr5_1:48032912-48032931 | Msa0734280:CDS | 45.0% | |
! | GATTTTGCTTGATGCATCGG+CGG | + | chr5_1:48032963-48032982 | Msa0734280:CDS | 45.0% |
! | GAGGATGCTACAAGCTCTTT+TGG | + | chr5_1:48033068-48033087 | Msa0734280:CDS | 45.0% |
! | GCTCTTTTGGATGGTACAGA+CGG | + | chr5_1:48033081-48033100 | Msa0734280:CDS | 45.0% |
TCTGGAAGAGAGACATCAAC+AGG | - | chr5_1:48033204-48033223 | None:intergenic | 45.0% | |
TGGATGAACAAAGGGACACT+CGG | - | chr5_1:48033316-48033335 | None:intergenic | 45.0% | |
AGTGTCCCTTTGTTCATCCA+GGG | + | chr5_1:48033316-48033335 | Msa0734280:CDS | 45.0% | |
TTCATCCAGGGGAAAATGCA+AGG | + | chr5_1:48033328-48033347 | Msa0734280:CDS | 45.0% | |
CTTTCCGAAACTCAGGACAA+GGG | - | chr5_1:48033389-48033408 | None:intergenic | 45.0% | |
!!! | CACACGGTATTTTTGAGTGC+TGG | + | chr5_1:48033442-48033461 | Msa0734280:CDS | 45.0% |
ATCCTGCGCAGTATAAGACA+CGG | + | chr5_1:48033469-48033488 | Msa0734280:CDS | 45.0% | |
GTATAAGACACGGCTTTGCA+AGG | + | chr5_1:48033479-48033498 | Msa0734280:CDS | 45.0% | |
! | AACCGGTAGAAGCATACAAG+GGG | - | chr5_1:48033563-48033582 | None:intergenic | 45.0% |
! | GAACCGGTAGAAGCATACAA+GGG | - | chr5_1:48033564-48033583 | None:intergenic | 45.0% |
! | AGAACCGGTAGAAGCATACA+AGG | - | chr5_1:48033565-48033584 | None:intergenic | 45.0% |
AGGAGATGGAATAGCAGAAC+CGG | - | chr5_1:48033580-48033599 | None:intergenic | 45.0% | |
GATGGAGAACCAAGTGACAT+TGG | - | chr5_1:48033651-48033670 | None:intergenic | 45.0% | |
GAGGGTGGTATCAAAACAGA+TGG | - | chr5_1:48033669-48033688 | None:intergenic | 45.0% | |
GATGCTCCAGATGAAGTCAA+AGG | - | chr5_1:48033702-48033721 | None:intergenic | 45.0% | |
!! | TTTTGGGAAGCTGAAGGGTA+GGG | - | chr5_1:48033776-48033795 | None:intergenic | 45.0% |
!! | TCTGCTTTTGGGAAGCTGAA+GGG | - | chr5_1:48033781-48033800 | None:intergenic | 45.0% |
!! | ATCTGCTTTTGGGAAGCTGA+AGG | - | chr5_1:48033782-48033801 | None:intergenic | 45.0% |
CCCAAAAGCAGATTGAAGAC+TGG | + | chr5_1:48033789-48033808 | Msa0734280:CDS | 45.0% | |
TGCTTAGGGTTGAAACTCAG+CGG | + | chr5_1:48033847-48033866 | Msa0734280:CDS | 45.0% | |
! | CTACTGATGGATGAGATGTC+CGG | + | chr5_1:48033882-48033901 | Msa0734280:CDS | 45.0% |
ATGATTCCAGTTGGAAGGAG+AGG | - | chr5_1:48033913-48033932 | None:intergenic | 45.0% | |
AGGCATGGAATGATTCCAGT+TGG | - | chr5_1:48033922-48033941 | None:intergenic | 45.0% | |
! | GCCTAACAGTCCATCTTTTC+CGG | + | chr5_1:48033938-48033957 | Msa0734280:CDS | 45.0% |
!! | ACCGGAAAAGATGGACTGTT+AGG | - | chr5_1:48033942-48033961 | None:intergenic | 45.0% |
TCTTCAACCAACCATACGAC+CGG | + | chr5_1:48033963-48033982 | Msa0734280:CDS | 45.0% | |
! | TATTTAGTTCCCCGGTCGTA+TGG | - | chr5_1:48033977-48033996 | None:intergenic | 45.0% |
ATACGACCGGGGAACTAAAT+AGG | + | chr5_1:48033976-48033995 | Msa0734280:CDS | 45.0% | |
GAGACCCGAAAATGTCTTCA+AGG | - | chr5_1:48034025-48034044 | None:intergenic | 45.0% | |
CGATCCAATCACACTAGAAG+TGG | - | chr5_1:48034192-48034211 | None:intergenic | 45.0% | |
CACCCGATGGAAATTTGGAT+TGG | + | chr5_1:48034378-48034397 | Msa0734280:CDS | 45.0% | |
!! | TGGAGTTAAAGGAGTACTGG+TGG | - | chr5_1:48034462-48034481 | None:intergenic | 45.0% |
! | AGCTGGAGTTAAAGGAGTAC+TGG | - | chr5_1:48034465-48034484 | None:intergenic | 45.0% |
TTTAACTCCAGCTGCAGCTA+GGG | + | chr5_1:48034472-48034491 | Msa0734280:CDS | 45.0% | |
TACAATTGCTCCAACCAAGC+CGG | - | chr5_1:48034641-48034660 | None:intergenic | 45.0% | |
GGAGCAATTGTACATGGATC+AGG | + | chr5_1:48034649-48034668 | Msa0734280:CDS | 45.0% | |
ATGGGGTGTGAGTATGTGAA+TGG | + | chr5_1:48032610-48032629 | Msa0734280:CDS | 45.0% | |
TGGGGTGTGAGTATGTGAAT+GGG | + | chr5_1:48032611-48032630 | Msa0734280:CDS | 45.0% | |
!! | ATGTTGATGGGGTTGGTTTG+TGG | + | chr5_1:48032734-48032753 | Msa0734280:CDS | 45.0% |
TACATAGCTGCAACCATGAG+AGG | - | chr5_1:48032808-48032827 | None:intergenic | 45.0% | |
CTCATGGTTGCAGCTATGTA+TGG | + | chr5_1:48032808-48032827 | Msa0734280:CDS | 45.0% | |
TGCAGCTATGTATGGAAGCT+TGG | + | chr5_1:48032816-48032835 | Msa0734280:CDS | 45.0% | |
!! | CAGGTCGGGTTGATGTTAAT+CGG | + | chr5_1:48032863-48032882 | Msa0734280:CDS | 45.0% |
ATGAAGAGCAGTAGCACCAT+CGG | - | chr5_1:48032899-48032918 | None:intergenic | 45.0% | |
TGCTACTGCTCTTCATTGTG+CGG | + | chr5_1:48032903-48032922 | Msa0734280:CDS | 45.0% | |
CTCTTCATTGTGCGGTTGTT+GGG | + | chr5_1:48032911-48032930 | Msa0734280:CDS | 45.0% | |
TCTTCATTGTGCGGTTGTTG+GGG | + | chr5_1:48032912-48032931 | Msa0734280:CDS | 45.0% | |
! | GATTTTGCTTGATGCATCGG+CGG | + | chr5_1:48032963-48032982 | Msa0734280:CDS | 45.0% |
! | GAGGATGCTACAAGCTCTTT+TGG | + | chr5_1:48033068-48033087 | Msa0734280:CDS | 45.0% |
! | GCTCTTTTGGATGGTACAGA+CGG | + | chr5_1:48033081-48033100 | Msa0734280:CDS | 45.0% |
TCTGGAAGAGAGACATCAAC+AGG | - | chr5_1:48033204-48033223 | None:intergenic | 45.0% | |
TGGATGAACAAAGGGACACT+CGG | - | chr5_1:48033316-48033335 | None:intergenic | 45.0% | |
AGTGTCCCTTTGTTCATCCA+GGG | + | chr5_1:48033316-48033335 | Msa0734280:CDS | 45.0% | |
TTCATCCAGGGGAAAATGCA+AGG | + | chr5_1:48033328-48033347 | Msa0734280:CDS | 45.0% | |
CTTTCCGAAACTCAGGACAA+GGG | - | chr5_1:48033389-48033408 | None:intergenic | 45.0% | |
!!! | CACACGGTATTTTTGAGTGC+TGG | + | chr5_1:48033442-48033461 | Msa0734280:CDS | 45.0% |
ATCCTGCGCAGTATAAGACA+CGG | + | chr5_1:48033469-48033488 | Msa0734280:CDS | 45.0% | |
GTATAAGACACGGCTTTGCA+AGG | + | chr5_1:48033479-48033498 | Msa0734280:CDS | 45.0% | |
! | AACCGGTAGAAGCATACAAG+GGG | - | chr5_1:48033563-48033582 | None:intergenic | 45.0% |
! | GAACCGGTAGAAGCATACAA+GGG | - | chr5_1:48033564-48033583 | None:intergenic | 45.0% |
! | AGAACCGGTAGAAGCATACA+AGG | - | chr5_1:48033565-48033584 | None:intergenic | 45.0% |
AGGAGATGGAATAGCAGAAC+CGG | - | chr5_1:48033580-48033599 | None:intergenic | 45.0% | |
GATGGAGAACCAAGTGACAT+TGG | - | chr5_1:48033651-48033670 | None:intergenic | 45.0% | |
GAGGGTGGTATCAAAACAGA+TGG | - | chr5_1:48033669-48033688 | None:intergenic | 45.0% | |
GATGCTCCAGATGAAGTCAA+AGG | - | chr5_1:48033702-48033721 | None:intergenic | 45.0% | |
!! | TTTTGGGAAGCTGAAGGGTA+GGG | - | chr5_1:48033776-48033795 | None:intergenic | 45.0% |
!! | TCTGCTTTTGGGAAGCTGAA+GGG | - | chr5_1:48033781-48033800 | None:intergenic | 45.0% |
!! | ATCTGCTTTTGGGAAGCTGA+AGG | - | chr5_1:48033782-48033801 | None:intergenic | 45.0% |
CCCAAAAGCAGATTGAAGAC+TGG | + | chr5_1:48033789-48033808 | Msa0734280:CDS | 45.0% | |
TGCTTAGGGTTGAAACTCAG+CGG | + | chr5_1:48033847-48033866 | Msa0734280:CDS | 45.0% | |
! | CTACTGATGGATGAGATGTC+CGG | + | chr5_1:48033882-48033901 | Msa0734280:CDS | 45.0% |
ATGATTCCAGTTGGAAGGAG+AGG | - | chr5_1:48033913-48033932 | None:intergenic | 45.0% | |
AGGCATGGAATGATTCCAGT+TGG | - | chr5_1:48033922-48033941 | None:intergenic | 45.0% | |
! | GCCTAACAGTCCATCTTTTC+CGG | + | chr5_1:48033938-48033957 | Msa0734280:CDS | 45.0% |
!! | ACCGGAAAAGATGGACTGTT+AGG | - | chr5_1:48033942-48033961 | None:intergenic | 45.0% |
TCTTCAACCAACCATACGAC+CGG | + | chr5_1:48033963-48033982 | Msa0734280:CDS | 45.0% | |
! | TATTTAGTTCCCCGGTCGTA+TGG | - | chr5_1:48033977-48033996 | None:intergenic | 45.0% |
ATACGACCGGGGAACTAAAT+AGG | + | chr5_1:48033976-48033995 | Msa0734280:CDS | 45.0% | |
GAGACCCGAAAATGTCTTCA+AGG | - | chr5_1:48034025-48034044 | None:intergenic | 45.0% | |
CGATCCAATCACACTAGAAG+TGG | - | chr5_1:48034192-48034211 | None:intergenic | 45.0% | |
CACCCGATGGAAATTTGGAT+TGG | + | chr5_1:48034378-48034397 | Msa0734280:CDS | 45.0% | |
!! | TGGAGTTAAAGGAGTACTGG+TGG | - | chr5_1:48034462-48034481 | None:intergenic | 45.0% |
! | AGCTGGAGTTAAAGGAGTAC+TGG | - | chr5_1:48034465-48034484 | None:intergenic | 45.0% |
TTTAACTCCAGCTGCAGCTA+GGG | + | chr5_1:48034472-48034491 | Msa0734280:CDS | 45.0% | |
TACAATTGCTCCAACCAAGC+CGG | - | chr5_1:48034641-48034660 | None:intergenic | 45.0% | |
GGAGCAATTGTACATGGATC+AGG | + | chr5_1:48034649-48034668 | Msa0734280:CDS | 45.0% | |
TCAGCTGCAGATGATGTGGT+TGG | + | chr5_1:48032679-48032698 | Msa0734280:CDS | 50.0% | |
AACGAGGGTTGCGATGTTGA+TGG | + | chr5_1:48032721-48032740 | Msa0734280:CDS | 50.0% | |
ACGAGGGTTGCGATGTTGAT+GGG | + | chr5_1:48032722-48032741 | Msa0734280:CDS | 50.0% | |
!! | GATGGGGTTGGTTTGTGGTA+TGG | + | chr5_1:48032739-48032758 | Msa0734280:CDS | 50.0% |
!! | GGGTTGGTTTGTGGTATGGA+AGG | + | chr5_1:48032743-48032762 | Msa0734280:CDS | 50.0% |
TGAAGAGAGGACACCTCTCA+TGG | + | chr5_1:48032792-48032811 | Msa0734280:CDS | 50.0% | |
! | AATCGGTCTAGTGGATCCGA+TGG | + | chr5_1:48032880-48032899 | Msa0734280:CDS | 50.0% |
GCTCTTCATTGTGCGGTTGT+TGG | + | chr5_1:48032910-48032929 | Msa0734280:CDS | 50.0% | |
CTTCATTGTGCGGTTGTTGG+GGG | + | chr5_1:48032913-48032932 | Msa0734280:CDS | 50.0% | |
! | GCTAGTGCTGTTGATGCCAA+CGG | + | chr5_1:48032988-48033007 | Msa0734280:CDS | 50.0% |
ATCAACTGGTCGGTTACCGT+TGG | - | chr5_1:48033007-48033026 | None:intergenic | 50.0% | |
GCTTGTAGCATCCTCTTCCT+TGG | - | chr5_1:48033063-48033082 | None:intergenic | 50.0% | |
GAGTGTCCCTTTGTTCATCC+AGG | + | chr5_1:48033315-48033334 | Msa0734280:CDS | 50.0% | |
GTGTCCCTTTGTTCATCCAG+GGG | + | chr5_1:48033317-48033336 | Msa0734280:CDS | 50.0% | |
GTGTCCCTTGTCCTGAGTTT+CGG | + | chr5_1:48033382-48033401 | Msa0734280:CDS | 50.0% | |
CCTTTCCGAAACTCAGGACA+AGG | - | chr5_1:48033390-48033409 | None:intergenic | 50.0% | |
CCTTGTCCTGAGTTTCGGAA+AGG | + | chr5_1:48033387-48033406 | Msa0734280:CDS | 50.0% | |
CACGATCCTTTCCGAAACTC+AGG | - | chr5_1:48033396-48033415 | None:intergenic | 50.0% | |
CGGAAAGGATCGTGCAGTAA+AGG | + | chr5_1:48033402-48033421 | Msa0734280:CDS | 50.0% | |
ACACGGCTTTGCAAGGATGA+AGG | + | chr5_1:48033486-48033505 | Msa0734280:CDS | 50.0% | |
CTTCTTTGCTCACAAGGTCG+AGG | + | chr5_1:48033530-48033549 | Msa0734280:CDS | 50.0% | |
GCTCCAGATGAAGTCAAAGG+CGG | - | chr5_1:48033699-48033718 | None:intergenic | 50.0% | |
ATTAGACGGTGTCTGCCACA+TGG | - | chr5_1:48033745-48033764 | None:intergenic | 50.0% | |
!! | CTTTTGGGAAGCTGAAGGGT+AGG | - | chr5_1:48033777-48033796 | None:intergenic | 50.0% |
GCGAAAGCAGCAACTACTGA+TGG | + | chr5_1:48033869-48033888 | Msa0734280:CDS | 50.0% | |
GTTGGAAGGAGAGGAAAGAC+CGG | - | chr5_1:48033904-48033923 | None:intergenic | 50.0% | |
GTCTTTCCTCTCCTTCCAAC+TGG | + | chr5_1:48033904-48033923 | Msa0734280:CDS | 50.0% | |
CTTCAACCAACCATACGACC+GGG | + | chr5_1:48033964-48033983 | Msa0734280:CDS | 50.0% | |
TTCAACCAACCATACGACCG+GGG | + | chr5_1:48033965-48033984 | Msa0734280:CDS | 50.0% | |
GGACGCATTTGGATTCCAGT+TGG | - | chr5_1:48034125-48034144 | None:intergenic | 50.0% | |
TGATTGGATCGCCGACCTAT+AGG | + | chr5_1:48034201-48034220 | Msa0734280:CDS | 50.0% | |
ATCTGGAGAGTTATCCGCGT+CGG | + | chr5_1:48034232-48034251 | Msa0734280:CDS | 50.0% | |
TCTTGCATTCAAAGCCGACG+CGG | - | chr5_1:48034249-48034268 | None:intergenic | 50.0% | |
CTAGCTGCAGCTGGAGTTAA+AGG | - | chr5_1:48034473-48034492 | None:intergenic | 50.0% | |
CTTTAACTCCAGCTGCAGCT+AGG | + | chr5_1:48034471-48034490 | Msa0734280:CDS | 50.0% | |
CTGCAGCGCCATCTTAACAA+TGG | + | chr5_1:48034602-48034621 | Msa0734280:CDS | 50.0% | |
GAACAGATTCGATTCCGGCT+TGG | + | chr5_1:48034624-48034643 | Msa0734280:CDS | 50.0% | |
!! | AGATTCGATTCCGGCTTGGT+TGG | + | chr5_1:48034628-48034647 | Msa0734280:CDS | 50.0% |
TCAGCTGCAGATGATGTGGT+TGG | + | chr5_1:48032679-48032698 | Msa0734280:CDS | 50.0% | |
AACGAGGGTTGCGATGTTGA+TGG | + | chr5_1:48032721-48032740 | Msa0734280:CDS | 50.0% | |
ACGAGGGTTGCGATGTTGAT+GGG | + | chr5_1:48032722-48032741 | Msa0734280:CDS | 50.0% | |
!! | GATGGGGTTGGTTTGTGGTA+TGG | + | chr5_1:48032739-48032758 | Msa0734280:CDS | 50.0% |
!! | GGGTTGGTTTGTGGTATGGA+AGG | + | chr5_1:48032743-48032762 | Msa0734280:CDS | 50.0% |
TGAAGAGAGGACACCTCTCA+TGG | + | chr5_1:48032792-48032811 | Msa0734280:CDS | 50.0% | |
! | AATCGGTCTAGTGGATCCGA+TGG | + | chr5_1:48032880-48032899 | Msa0734280:CDS | 50.0% |
GCTCTTCATTGTGCGGTTGT+TGG | + | chr5_1:48032910-48032929 | Msa0734280:CDS | 50.0% | |
CTTCATTGTGCGGTTGTTGG+GGG | + | chr5_1:48032913-48032932 | Msa0734280:CDS | 50.0% | |
! | GCTAGTGCTGTTGATGCCAA+CGG | + | chr5_1:48032988-48033007 | Msa0734280:CDS | 50.0% |
ATCAACTGGTCGGTTACCGT+TGG | - | chr5_1:48033007-48033026 | None:intergenic | 50.0% | |
GCTTGTAGCATCCTCTTCCT+TGG | - | chr5_1:48033063-48033082 | None:intergenic | 50.0% | |
GAGTGTCCCTTTGTTCATCC+AGG | + | chr5_1:48033315-48033334 | Msa0734280:CDS | 50.0% | |
GTGTCCCTTTGTTCATCCAG+GGG | + | chr5_1:48033317-48033336 | Msa0734280:CDS | 50.0% | |
GTGTCCCTTGTCCTGAGTTT+CGG | + | chr5_1:48033382-48033401 | Msa0734280:CDS | 50.0% | |
CCTTTCCGAAACTCAGGACA+AGG | - | chr5_1:48033390-48033409 | None:intergenic | 50.0% | |
CCTTGTCCTGAGTTTCGGAA+AGG | + | chr5_1:48033387-48033406 | Msa0734280:CDS | 50.0% | |
CACGATCCTTTCCGAAACTC+AGG | - | chr5_1:48033396-48033415 | None:intergenic | 50.0% | |
CGGAAAGGATCGTGCAGTAA+AGG | + | chr5_1:48033402-48033421 | Msa0734280:CDS | 50.0% | |
ACACGGCTTTGCAAGGATGA+AGG | + | chr5_1:48033486-48033505 | Msa0734280:CDS | 50.0% | |
CTTCTTTGCTCACAAGGTCG+AGG | + | chr5_1:48033530-48033549 | Msa0734280:CDS | 50.0% | |
GCTCCAGATGAAGTCAAAGG+CGG | - | chr5_1:48033699-48033718 | None:intergenic | 50.0% | |
ATTAGACGGTGTCTGCCACA+TGG | - | chr5_1:48033745-48033764 | None:intergenic | 50.0% | |
!! | CTTTTGGGAAGCTGAAGGGT+AGG | - | chr5_1:48033777-48033796 | None:intergenic | 50.0% |
GCGAAAGCAGCAACTACTGA+TGG | + | chr5_1:48033869-48033888 | Msa0734280:CDS | 50.0% | |
GTTGGAAGGAGAGGAAAGAC+CGG | - | chr5_1:48033904-48033923 | None:intergenic | 50.0% | |
GTCTTTCCTCTCCTTCCAAC+TGG | + | chr5_1:48033904-48033923 | Msa0734280:CDS | 50.0% | |
CTTCAACCAACCATACGACC+GGG | + | chr5_1:48033964-48033983 | Msa0734280:CDS | 50.0% | |
TTCAACCAACCATACGACCG+GGG | + | chr5_1:48033965-48033984 | Msa0734280:CDS | 50.0% | |
GGACGCATTTGGATTCCAGT+TGG | - | chr5_1:48034125-48034144 | None:intergenic | 50.0% | |
TGATTGGATCGCCGACCTAT+AGG | + | chr5_1:48034201-48034220 | Msa0734280:CDS | 50.0% | |
ATCTGGAGAGTTATCCGCGT+CGG | + | chr5_1:48034232-48034251 | Msa0734280:CDS | 50.0% | |
TCTTGCATTCAAAGCCGACG+CGG | - | chr5_1:48034249-48034268 | None:intergenic | 50.0% | |
CTAGCTGCAGCTGGAGTTAA+AGG | - | chr5_1:48034473-48034492 | None:intergenic | 50.0% | |
CTTTAACTCCAGCTGCAGCT+AGG | + | chr5_1:48034471-48034490 | Msa0734280:CDS | 50.0% | |
CTGCAGCGCCATCTTAACAA+TGG | + | chr5_1:48034602-48034621 | Msa0734280:CDS | 50.0% | |
GAACAGATTCGATTCCGGCT+TGG | + | chr5_1:48034624-48034643 | Msa0734280:CDS | 50.0% | |
!! | AGATTCGATTCCGGCTTGGT+TGG | + | chr5_1:48034628-48034647 | Msa0734280:CDS | 50.0% |
CGAGGGTTGCGATGTTGATG+GGG | + | chr5_1:48032723-48032742 | Msa0734280:CDS | 55.0% | |
! | GGTTGCGATGTTGATGGGGT+TGG | + | chr5_1:48032727-48032746 | Msa0734280:CDS | 55.0% |
AGCCGTGTCTTATACTGCGC+AGG | - | chr5_1:48033474-48033493 | None:intergenic | 55.0% | |
CGCCCCTTGTATGCTTCTAC+CGG | + | chr5_1:48033558-48033577 | Msa0734280:CDS | 55.0% | |
TGAAGTCAAAGGCGGCGTTG+AGG | - | chr5_1:48033691-48033710 | None:intergenic | 55.0% | |
! | ACGCCGCCTTTGACTTCATC+TGG | + | chr5_1:48033693-48033712 | Msa0734280:CDS | 55.0% |
TAGTTCCCCGGTCGTATGGT+TGG | - | chr5_1:48033973-48033992 | None:intergenic | 55.0% | |
GACGCGGATAACTCTCCAGA+TGG | - | chr5_1:48034233-48034252 | None:intergenic | 55.0% | |
CACTGCGCTCGATAAAGCTC+TGG | - | chr5_1:48034295-48034314 | None:intergenic | 55.0% | |
GGGCTCACCCGATGGAAATT+TGG | + | chr5_1:48034373-48034392 | Msa0734280:CDS | 55.0% | |
CGAGGGTTGCGATGTTGATG+GGG | + | chr5_1:48032723-48032742 | Msa0734280:CDS | 55.0% | |
! | GGTTGCGATGTTGATGGGGT+TGG | + | chr5_1:48032727-48032746 | Msa0734280:CDS | 55.0% |
AGCCGTGTCTTATACTGCGC+AGG | - | chr5_1:48033474-48033493 | None:intergenic | 55.0% | |
CGCCCCTTGTATGCTTCTAC+CGG | + | chr5_1:48033558-48033577 | Msa0734280:CDS | 55.0% | |
TGAAGTCAAAGGCGGCGTTG+AGG | - | chr5_1:48033691-48033710 | None:intergenic | 55.0% | |
! | ACGCCGCCTTTGACTTCATC+TGG | + | chr5_1:48033693-48033712 | Msa0734280:CDS | 55.0% |
TAGTTCCCCGGTCGTATGGT+TGG | - | chr5_1:48033973-48033992 | None:intergenic | 55.0% | |
GACGCGGATAACTCTCCAGA+TGG | - | chr5_1:48034233-48034252 | None:intergenic | 55.0% | |
CACTGCGCTCGATAAAGCTC+TGG | - | chr5_1:48034295-48034314 | None:intergenic | 55.0% | |
GGGCTCACCCGATGGAAATT+TGG | + | chr5_1:48034373-48034392 | Msa0734280:CDS | 55.0% | |
! | CGTCGCCTTGCATTTTCCCC+TGG | - | chr5_1:48033336-48033355 | None:intergenic | 60.0% |
ATGCAAGGCGACGCGATCCA+AGG | + | chr5_1:48033343-48033362 | Msa0734280:CDS | 60.0% | |
! | GTCAAAGGCGGCGTTGAGGA+GGG | - | chr5_1:48033687-48033706 | None:intergenic | 60.0% |
! | AGTCAAAGGCGGCGTTGAGG+AGG | - | chr5_1:48033688-48033707 | None:intergenic | 60.0% |
CACATGGCTGCAGCAGCAAC+GGG | - | chr5_1:48033729-48033748 | None:intergenic | 60.0% | |
CCACATGGCTGCAGCAGCAA+CGG | - | chr5_1:48033730-48033749 | None:intergenic | 60.0% | |
CTTGATGCTGCAGGAGCAGC+AGG | + | chr5_1:48034083-48034102 | Msa0734280:CDS | 60.0% | |
TCTAACTGGGGCTCACCCGA+TGG | + | chr5_1:48034365-48034384 | Msa0734280:CDS | 60.0% | |
! | CGTCGCCTTGCATTTTCCCC+TGG | - | chr5_1:48033336-48033355 | None:intergenic | 60.0% |
ATGCAAGGCGACGCGATCCA+AGG | + | chr5_1:48033343-48033362 | Msa0734280:CDS | 60.0% | |
! | GTCAAAGGCGGCGTTGAGGA+GGG | - | chr5_1:48033687-48033706 | None:intergenic | 60.0% |
! | AGTCAAAGGCGGCGTTGAGG+AGG | - | chr5_1:48033688-48033707 | None:intergenic | 60.0% |
CACATGGCTGCAGCAGCAAC+GGG | - | chr5_1:48033729-48033748 | None:intergenic | 60.0% | |
CCACATGGCTGCAGCAGCAA+CGG | - | chr5_1:48033730-48033749 | None:intergenic | 60.0% | |
CTTGATGCTGCAGGAGCAGC+AGG | + | chr5_1:48034083-48034102 | Msa0734280:CDS | 60.0% | |
TCTAACTGGGGCTCACCCGA+TGG | + | chr5_1:48034365-48034384 | Msa0734280:CDS | 60.0% | |
! | AAAGGCGGCGTTGAGGAGGG+TGG | - | chr5_1:48033684-48033703 | None:intergenic | 65.0% |
CCGTTGCTGCTGCAGCCATG+TGG | + | chr5_1:48033727-48033746 | Msa0734280:CDS | 65.0% | |
TCCAGCTGCAGCTAGGGCAC+AGG | + | chr5_1:48034478-48034497 | Msa0734280:CDS | 65.0% | |
TCCTGTGCCCTAGCTGCAGC+TGG | - | chr5_1:48034482-48034501 | None:intergenic | 65.0% | |
! | AAAGGCGGCGTTGAGGAGGG+TGG | - | chr5_1:48033684-48033703 | None:intergenic | 65.0% |
CCGTTGCTGCTGCAGCCATG+TGG | + | chr5_1:48033727-48033746 | Msa0734280:CDS | 65.0% | |
TCCAGCTGCAGCTAGGGCAC+AGG | + | chr5_1:48034478-48034497 | Msa0734280:CDS | 65.0% | |
TCCTGTGCCCTAGCTGCAGC+TGG | - | chr5_1:48034482-48034501 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_1 | gene | 48032565 | 48034688 | 48032565 | ID=Msa0734280;Name=Msa0734280 |
chr5_1 | mRNA | 48032565 | 48034688 | 48032565 | ID=Msa0734280-mRNA-1;Parent=Msa0734280;Name=Msa0734280-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|-1|0|1|-1|1|1|0|707 |
chr5_1 | exon | 48032565 | 48034688 | 48032565 | ID=Msa0734280-mRNA-1:exon:13749;Parent=Msa0734280-mRNA-1 |
chr5_1 | CDS | 48032565 | 48034688 | 48032565 | ID=Msa0734280-mRNA-1:cds;Parent=Msa0734280-mRNA-1 |
Gene Sequence |
Protein sequence |