AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0734280


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0734280 MtrunA17_Chr5g0430211 96.322 707 23 1 1 707 1 704 0.0 1420
Msa0734280 MtrunA17_Chr5g0437251 49.712 694 296 13 30 706 25 682 0.0 636
Msa0734280 MtrunA17_Chr1g0187591 54.294 652 205 14 1 642 1 569 0.0 615
Msa0734280 MtrunA17_Chr3g0105131 46.213 647 197 17 1 641 1 502 3.07e-157 464
Msa0734280 MtrunA17_Chr7g0257831 42.229 682 291 19 35 663 47 678 2.56e-155 467
Msa0734280 MtrunA17_Chr3g0088521 39.532 726 343 18 33 702 43 728 2.49e-146 444
Msa0734280 MtrunA17_Chr3g0105101 46.465 495 140 12 39 530 29 401 7.66e-125 377
Msa0734280 MtrunA17_Chr3g0113651 46.404 431 161 5 33 462 8 369 2.50e-124 380
Msa0734280 MtrunA17_Chr3g0113651 32.569 218 121 9 483 698 322 515 9.33e-18 87.0
Msa0734280 MtrunA17_Chr1g0171151 40.406 542 255 15 35 538 31 542 7.06e-109 343
Msa0734280 MtrunA17_Chr3g0092171 43.631 369 163 7 32 381 80 422 3.17e-89 288
Msa0734280 MtrunA17_Chr3g0092221 41.194 335 139 10 138 451 51 348 7.52e-73 241
Msa0734280 MtrunA17_Chr3g0105121 38.532 436 177 14 229 660 8 356 1.25e-69 231
Msa0734280 MtrunA17_Chr3g0105141 65.000 140 47 2 199 336 4 143 1.55e-61 203
Msa0734280 MtrunA17_Chr8g0389561 43.498 223 115 3 162 381 21 235 1.08e-54 192
Msa0734280 MtrunA17_Chr6g0487481 57.971 138 48 2 196 332 77 205 4.77e-52 184
Msa0734280 MtrunA17_Chr3g0135351 49.419 172 73 3 202 372 32 190 1.17e-51 181
Msa0734280 MtrunA17_Chr2g0324781 61.261 111 43 0 230 340 77 187 2.20e-47 173
Msa0734280 MtrunA17_Chr4g0040391 57.009 107 46 0 226 332 56 162 2.98e-44 161
Msa0734280 MtrunA17_Chr3g0105151 35.517 290 112 12 394 671 1 227 6.92e-31 121
Msa0734280 MtrunA17_Chr3g0105111 43.103 116 39 5 596 706 17 110 1.51e-14 70.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0734280 AT5G58620.1 47.050 695 267 18 23 706 2 606 0.0 572
Msa0734280 AT2G40140.2 42.297 714 285 17 1 706 1 595 9.74e-174 510
Msa0734280 AT2G40140.1 42.297 714 285 17 1 706 1 595 9.74e-174 510
Msa0734280 AT2G41900.1 39.702 738 300 23 35 702 48 710 5.76e-144 437
Msa0734280 AT3G55980.1 50.000 474 194 13 1 462 1 443 3.97e-142 428
Msa0734280 AT3G55980.1 38.071 197 82 8 514 706 419 579 2.49e-21 99.0
Msa0734280 AT3G55980.2 50.000 474 194 13 1 462 68 510 1.24e-141 429
Msa0734280 AT3G55980.2 38.071 197 82 8 514 706 486 646 4.28e-21 98.6
Msa0734280 AT5G12850.1 38.267 750 306 25 30 702 37 706 1.39e-139 426
Msa0734280 AT4G29190.1 52.273 176 83 1 212 387 62 236 1.74e-54 191
Msa0734280 AT2G25900.2 66.964 112 37 0 226 337 86 197 3.55e-53 186
Msa0734280 AT2G25900.1 66.964 112 37 0 226 337 86 197 3.55e-53 186
Msa0734280 AT2G19810.1 63.333 120 44 0 215 334 63 182 8.46e-53 186
Msa0734280 AT5G07500.1 52.703 148 66 1 189 332 7 154 1.28e-49 174
Msa0734280 AT1G03790.1 51.634 153 66 3 197 345 53 201 2.70e-47 172
Msa0734280 AT5G44260.1 55.970 134 54 2 210 342 44 173 2.69e-45 166

Find 185 sgRNAs with CRISPR-Local

Find 432 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCAGTCTTCAATCTGCTTT+TGG 0.183105 5_1:-48033790 None:intergenic
TCAGACATGTCTTCTGTTTC+CGG 0.194365 5_1:+48033110 Msa0734280:CDS
GATGTATCGGCTTATATTCT+TGG 0.209122 5_1:+48032838 Msa0734280:CDS
CTGAGGAAATCATCTTCTTT+TGG 0.219994 5_1:+48034428 Msa0734280:CDS
CTCTTCATTGTGCGGTTGTT+GGG 0.225881 5_1:+48032911 Msa0734280:CDS
AAAGTTGGTTCGAACAAATT+AGG 0.237750 5_1:+48032766 Msa0734280:CDS
GGGCTCACCCGATGGAAATT+TGG 0.238746 5_1:+48034373 Msa0734280:CDS
CTAGCTGCAGCTGGAGTTAA+AGG 0.264190 5_1:-48034470 None:intergenic
GAGGATGCTACAAGCTCTTT+TGG 0.287126 5_1:+48033068 Msa0734280:CDS
CAAGGGCTTATTCTCATGAT+TGG 0.318225 5_1:+48033289 Msa0734280:CDS
ATACGACCGGGGAACTAAAT+AGG 0.321029 5_1:+48033976 Msa0734280:CDS
GTGTCCCTTGTCCTGAGTTT+CGG 0.340392 5_1:+48033382 Msa0734280:CDS
GCTCTTCATTGTGCGGTTGT+TGG 0.359015 5_1:+48032910 Msa0734280:CDS
GATTCATATTCGGACGCATT+TGG 0.363999 5_1:-48034133 None:intergenic
TGCAGATGCTGATTCATATT+CGG 0.365840 5_1:-48034143 None:intergenic
ACGCCGCCTTTGACTTCATC+TGG 0.368423 5_1:+48033693 Msa0734280:CDS
GTCTTTCCTCTCCTTCCAAC+TGG 0.371979 5_1:+48033904 Msa0734280:CDS
CAATGGAACAGATTCGATTC+CGG 0.374222 5_1:+48034619 Msa0734280:CDS
TATATAGTACCGATGAGTTT+AGG 0.375544 5_1:+48033238 Msa0734280:CDS
TCCTGTGCCCTAGCTGCAGC+TGG 0.377666 5_1:-48034479 None:intergenic
CCTTGGATTGAAGATAGAAT+TGG 0.386827 5_1:-48033043 None:intergenic
CTGCAACAAAACTATTCTTC+AGG 0.389322 5_1:+48034161 Msa0734280:CDS
CGCCCCTTGTATGCTTCTAC+CGG 0.390009 5_1:+48033558 Msa0734280:CDS
GATGGGGTTGGTTTGTGGTA+TGG 0.391400 5_1:+48032739 Msa0734280:CDS
AGCAAAATCTTGATAATCTC+GGG 0.396619 5_1:-48032949 None:intergenic
CATTCCACTTCTAGTGTGAT+TGG 0.397045 5_1:+48034185 Msa0734280:CDS
CACATGGCTGCAGCAGCAAC+GGG 0.402327 5_1:-48033726 None:intergenic
ATTCAGATATTGCAATGCTT+AGG 0.408619 5_1:+48033832 Msa0734280:CDS
AAAATGTCTTCAAGGTTTGT+AGG 0.409953 5_1:-48034014 None:intergenic
TGGAATTTATGCAACATTGA+TGG 0.416189 5_1:-48034050 None:intergenic
ACCTATAGGTTTGATCCATC+TGG 0.416807 5_1:+48034215 Msa0734280:CDS
TTGGGTTAATTCACTTGTAA+AGG 0.417539 5_1:+48034526 Msa0734280:CDS
TTCAGATATTGCAATGCTTA+GGG 0.419562 5_1:+48033833 Msa0734280:CDS
TCGGCTTATATTCTTGGAAC+AGG 0.420142 5_1:+48032844 Msa0734280:CDS
TTGTCAAAAGGATTTGATCA+TGG 0.420181 5_1:+48032591 Msa0734280:CDS
TGATTGGATCGCCGACCTAT+AGG 0.422967 5_1:+48034201 Msa0734280:CDS
TATATCCCATTCTTAATGTC+TGG 0.426530 5_1:-48033219 None:intergenic
CTCATGGTTGCAGCTATGTA+TGG 0.426552 5_1:+48032808 Msa0734280:CDS
GCTTGTAGCATCCTCTTCCT+TGG 0.429452 5_1:-48033060 None:intergenic
TCAAAGTGAAGCCTTGTTCA+AGG 0.431149 5_1:+48033271 Msa0734280:CDS
AAGCAAAATCTTGATAATCT+CGG 0.433411 5_1:-48032950 None:intergenic
CTTGATGCTGCAGGAGCAGC+AGG 0.434896 5_1:+48034083 Msa0734280:CDS
GAGACCCGAAAATGTCTTCA+AGG 0.438096 5_1:-48034022 None:intergenic
CTTATATTCTTGGAACAGGT+CGG 0.443594 5_1:+48032848 Msa0734280:CDS
ATGTTGATGGGGTTGGTTTG+TGG 0.450945 5_1:+48032734 Msa0734280:CDS
GAGTGTCCCTTTGTTCATCC+AGG 0.455762 5_1:+48033315 Msa0734280:CDS
GGTTGCGATGTTGATGGGGT+TGG 0.455769 5_1:+48032727 Msa0734280:CDS
CACCCGATGGAAATTTGGAT+TGG 0.458700 5_1:+48034378 Msa0734280:CDS
AGCGAAACAATCAAATCAAC+TGG 0.459199 5_1:-48033018 None:intergenic
AATCTGTTCCATTGTTAAGA+TGG 0.459769 5_1:-48034610 None:intergenic
AGTTGATTTGATTGTTTCGC+TGG 0.460352 5_1:+48033020 Msa0734280:CDS
CCACATGGCTGCAGCAGCAA+CGG 0.462166 5_1:-48033727 None:intergenic
CAGCTATAATGATATTTCCT+TGG 0.464131 5_1:-48033360 None:intergenic
TGTCAAAAGGATTTGATCAT+GGG 0.468107 5_1:+48032592 Msa0734280:CDS
CTTCTTTGCTCACAAGGTCG+AGG 0.469734 5_1:+48033530 Msa0734280:CDS
ACGAGGGTTGCGATGTTGAT+GGG 0.471244 5_1:+48032722 Msa0734280:CDS
TCTCTTCCAGACATTAAGAA+TGG 0.478120 5_1:+48033213 Msa0734280:CDS
AGAATTTCACTTGATGCTGC+AGG 0.479378 5_1:+48034074 Msa0734280:CDS
CTTTAACTCCAGCTGCAGCT+AGG 0.479692 5_1:+48034471 Msa0734280:CDS
GGAGCAATTGTACATGGATC+AGG 0.480663 5_1:+48034649 Msa0734280:CDS
CTCTTCCAGACATTAAGAAT+GGG 0.482849 5_1:+48033214 Msa0734280:CDS
GCAGTACTGTAATACGATCT+AGG 0.485377 5_1:-48033597 None:intergenic
TACTGCTTCTACATTAGAGA+TGG 0.486960 5_1:+48033614 Msa0734280:CDS
TATGTGAATGGGAATAAAGA+AGG 0.487426 5_1:+48032622 Msa0734280:CDS
CGGAAAGGATCGTGCAGTAA+AGG 0.487429 5_1:+48033402 Msa0734280:CDS
AGATTCGATTCCGGCTTGGT+TGG 0.488203 5_1:+48034628 Msa0734280:CDS
ACCGGAAAAGATGGACTGTT+AGG 0.489839 5_1:-48033939 None:intergenic
AGCTGGAGTTAAAGGAGTAC+TGG 0.489995 5_1:-48034462 None:intergenic
TTATATTCTTGGAACAGGTC+GGG 0.491005 5_1:+48032849 Msa0734280:CDS
TCTTCATTGTGCGGTTGTTG+GGG 0.492583 5_1:+48032912 Msa0734280:CDS
TTGTGGTATGGAAGGAAAGT+TGG 0.493676 5_1:+48032751 Msa0734280:CDS
ATGGGGTGTGAGTATGTGAA+TGG 0.494445 5_1:+48032610 Msa0734280:CDS
GTTGAAGAAACCGGAAAAGA+TGG 0.494753 5_1:-48033948 None:intergenic
CAGGTCGGGTTGATGTTAAT+CGG 0.495738 5_1:+48032863 Msa0734280:CDS
GTATGGAAGCTTGGATGTAT+CGG 0.499389 5_1:+48032825 Msa0734280:CDS
CACTGCGCTCGATAAAGCTC+TGG 0.499905 5_1:-48034292 None:intergenic
TCTGGAAGAGAGACATCAAC+AGG 0.501027 5_1:-48033201 None:intergenic
TTTAACTCCAGCTGCAGCTA+GGG 0.502176 5_1:+48034472 Msa0734280:CDS
TATTTAGTTCCCCGGTCGTA+TGG 0.502935 5_1:-48033974 None:intergenic
AGGAGATGGAATAGCAGAAC+CGG 0.503649 5_1:-48033577 None:intergenic
TCTCAGTTACAATCTCCAAC+TGG 0.504676 5_1:+48034107 Msa0734280:CDS
GTATGGTTGGTTGAAGAAAC+CGG 0.504960 5_1:-48033957 None:intergenic
ATGGAGAACCAAGTGACATT+GGG 0.506623 5_1:-48033647 None:intergenic
GGACGCATTTGGATTCCAGT+TGG 0.507506 5_1:-48034122 None:intergenic
CTATGAACCAGATGTGTCTT+GGG 0.508226 5_1:+48034508 Msa0734280:CDS
TCCAGCTGCAGCTAGGGCAC+AGG 0.510410 5_1:+48034478 Msa0734280:CDS
ACACGGCTTTGCAAGGATGA+AGG 0.512844 5_1:+48033486 Msa0734280:CDS
TGCAGCTATGTATGGAAGCT+TGG 0.514902 5_1:+48032816 Msa0734280:CDS
GAATTAACCCAAGACACATC+TGG 0.517792 5_1:-48034515 None:intergenic
CAAAGTGAAGCCTTGTTCAA+GGG 0.517860 5_1:+48033272 Msa0734280:CDS
ATGCAAGGCGACGCGATCCA+AGG 0.519136 5_1:+48033343 Msa0734280:CDS
TTAGCGTTGAAGATCAGAAA+AGG 0.521469 5_1:+48034576 Msa0734280:CDS
GATGGAGAACCAAGTGACAT+TGG 0.523747 5_1:-48033648 None:intergenic
AACGAGGGTTGCGATGTTGA+TGG 0.524302 5_1:+48032721 Msa0734280:CDS
CGAAAACCTATTTAGTTCCC+CGG 0.524607 5_1:-48033982 None:intergenic
TCTTCAACCAACCATACGAC+CGG 0.524754 5_1:+48033963 Msa0734280:CDS
GAACAGATTCGATTCCGGCT+TGG 0.527010 5_1:+48034624 Msa0734280:CDS
TCAATTAGCCCAATGTCACT+TGG 0.534086 5_1:+48033639 Msa0734280:CDS
GTCCAATCCAAATTTCCATC+GGG 0.538779 5_1:-48034380 None:intergenic
TAGTTCCCCGGTCGTATGGT+TGG 0.539752 5_1:-48033970 None:intergenic
TTGGTTGGAGCAATTGTACA+TGG 0.540592 5_1:+48034643 Msa0734280:CDS
ACTATGAACCAGATGTGTCT+TGG 0.542920 5_1:+48034507 Msa0734280:CDS
CGATCCAATCACACTAGAAG+TGG 0.543683 5_1:-48034189 None:intergenic
ACTGCTTCTACATTAGAGAT+GGG 0.544371 5_1:+48033615 Msa0734280:CDS
TACAATTGCTCCAACCAAGC+CGG 0.546247 5_1:-48034638 None:intergenic
GTCAAAGGCGGCGTTGAGGA+GGG 0.547086 5_1:-48033684 None:intergenic
CTATCTTCAATCCAAGGAAG+AGG 0.548194 5_1:+48033049 Msa0734280:CDS
AGTTTGCTTCTTTGCTCACA+AGG 0.549883 5_1:+48033524 Msa0734280:CDS
CACGATCCTTTCCGAAACTC+AGG 0.550059 5_1:-48033393 None:intergenic
GCGAAAGCAGCAACTACTGA+TGG 0.552696 5_1:+48033869 Msa0734280:CDS
CTTCAACCAACCATACGACC+GGG 0.553306 5_1:+48033964 Msa0734280:CDS
CTGTAATACGATCTAGGAGA+TGG 0.556774 5_1:-48033591 None:intergenic
TCCAGATGGATCAAACCTAT+AGG 0.559606 5_1:-48034216 None:intergenic
CCAATTCTATCTTCAATCCA+AGG 0.560551 5_1:+48033043 Msa0734280:CDS
TCTAACTGGGGCTCACCCGA+TGG 0.560712 5_1:+48034365 Msa0734280:CDS
AGCCGTGTCTTATACTGCGC+AGG 0.561388 5_1:-48033471 None:intergenic
AGTCAAAGGCGGCGTTGAGG+AGG 0.561805 5_1:-48033685 None:intergenic
TCAATGTCATCAATTGTCTC+CGG 0.563566 5_1:-48033129 None:intergenic
TTCATCCAGGGGAAAATGCA+AGG 0.563820 5_1:+48033328 Msa0734280:CDS
AGAACCGGTAGAAGCATACA+AGG 0.565045 5_1:-48033562 None:intergenic
CTACTGATGGATGAGATGTC+CGG 0.565792 5_1:+48033882 Msa0734280:CDS
CCCAAAAGCAGATTGAAGAC+TGG 0.566689 5_1:+48033789 Msa0734280:CDS
GGGTTGGTTTGTGGTATGGA+AGG 0.567780 5_1:+48032743 Msa0734280:CDS
GTTGATGTTAATCGGTCTAG+TGG 0.567818 5_1:+48032871 Msa0734280:CDS
TCAGCTGCAGATGATGTGGT+TGG 0.573637 5_1:+48032679 Msa0734280:CDS
GAGGGTGGTATCAAAACAGA+TGG 0.574942 5_1:-48033666 None:intergenic
TGAAGAGAGGACACCTCTCA+TGG 0.576333 5_1:+48032792 Msa0734280:CDS
ACAAATTAGGTTATGAAGAG+AGG 0.576520 5_1:+48032779 Msa0734280:CDS
AGTGTCCCTTTGTTCATCCA+GGG 0.576667 5_1:+48033316 Msa0734280:CDS
ATGGAATGATTCCAGTTGGA+AGG 0.579291 5_1:-48033915 None:intergenic
CCTTTCCGAAACTCAGGACA+AGG 0.580350 5_1:-48033387 None:intergenic
GTATAAGACACGGCTTTGCA+AGG 0.581068 5_1:+48033479 Msa0734280:CDS
GTTGGAAGGAGAGGAAAGAC+CGG 0.583195 5_1:-48033901 None:intergenic
ATGATTCCAGTTGGAAGGAG+AGG 0.583775 5_1:-48033910 None:intergenic
GACGCGGATAACTCTCCAGA+TGG 0.585826 5_1:-48034230 None:intergenic
AGTCCAATCCAAATTTCCAT+CGG 0.586204 5_1:-48034381 None:intergenic
ATGAAGAGCAGTAGCACCAT+CGG 0.586647 5_1:-48032896 None:intergenic
ATGTGAATGGGAATAAAGAA+GGG 0.588204 5_1:+48032623 Msa0734280:CDS
CCTTGTCCTGAGTTTCGGAA+AGG 0.590059 5_1:+48033387 Msa0734280:CDS
AGGCATGGAATGATTCCAGT+TGG 0.590112 5_1:-48033919 None:intergenic
CCGTTGCTGCTGCAGCCATG+TGG 0.592506 5_1:+48033727 Msa0734280:CDS
CAATCACACTAGAAGTGGAA+TGG 0.595527 5_1:-48034184 None:intergenic
ATCAACTGGTCGGTTACCGT+TGG 0.595630 5_1:-48033004 None:intergenic
ATCTGAATTAATATCTCTAG+CGG 0.595917 5_1:-48033817 None:intergenic
TGGGGTGTGAGTATGTGAAT+GGG 0.600624 5_1:+48032611 Msa0734280:CDS
ATGACATTGACGAATATCAA+AGG 0.602422 5_1:+48033142 Msa0734280:CDS
AATTTGGATTGGACTTCACA+CGG 0.603583 5_1:+48034389 Msa0734280:CDS
CAGCATCAAGTGAAATTCTG+TGG 0.605687 5_1:-48034070 None:intergenic
TGCTACTGCTCTTCATTGTG+CGG 0.605703 5_1:+48032903 Msa0734280:CDS
GAGAATGAAGCTCAGAATGA+CGG 0.613447 5_1:-48034322 None:intergenic
AAAAGATGGACTGTTAGGCA+TGG 0.613610 5_1:-48033934 None:intergenic
ATCTGGAGAGTTATCCGCGT+CGG 0.616369 5_1:+48034232 Msa0734280:CDS
TGGATGAACAAAGGGACACT+CGG 0.617153 5_1:-48033313 None:intergenic
AATCGGTCTAGTGGATCCGA+TGG 0.617627 5_1:+48032880 Msa0734280:CDS
CTGCAGCGCCATCTTAACAA+TGG 0.619796 5_1:+48034602 Msa0734280:CDS
TGTATACATCCTAAACTCAT+CGG 0.621538 5_1:-48033247 None:intergenic
TACATAGCTGCAACCATGAG+AGG 0.624576 5_1:-48032805 None:intergenic
GCAAAATCTTGATAATCTCG+GGG 0.625212 5_1:-48032948 None:intergenic
TGAGAATAAGCCCTTGAACA+AGG 0.627841 5_1:-48033282 None:intergenic
GTCAAAAGGATTTGATCATG+GGG 0.630254 5_1:+48032593 Msa0734280:CDS
GTGTCCCTTTGTTCATCCAG+GGG 0.633464 5_1:+48033317 Msa0734280:CDS
CGAGGGTTGCGATGTTGATG+GGG 0.634282 5_1:+48032723 Msa0734280:CDS
CTTCATTGTGCGGTTGTTGG+GGG 0.635961 5_1:+48032913 Msa0734280:CDS
GATGCTCCAGATGAAGTCAA+AGG 0.639371 5_1:-48033699 None:intergenic
GATGGATCAAACCTATAGGT+CGG 0.639738 5_1:-48034212 None:intergenic
AAACAATCAAATCAACTGGT+CGG 0.641933 5_1:-48033014 None:intergenic
CTAAACTGATGAGATTCTTG+CGG 0.647291 5_1:-48034557 None:intergenic
AAAGGCGGCGTTGAGGAGGG+TGG 0.647882 5_1:-48033681 None:intergenic
GCTAGTGCTGTTGATGCCAA+CGG 0.653244 5_1:+48032988 Msa0734280:CDS
ATTAGACGGTGTCTGCCACA+TGG 0.653248 5_1:-48033742 None:intergenic
TAAAGAAGGGCAGTATCATG+AGG 0.655064 5_1:+48032636 Msa0734280:CDS
TGGAGTTAAAGGAGTACTGG+TGG 0.655843 5_1:-48034459 None:intergenic
TGAAGTCAAAGGCGGCGTTG+AGG 0.657176 5_1:-48033688 None:intergenic
TTCAACCAACCATACGACCG+GGG 0.664294 5_1:+48033965 Msa0734280:CDS
GAGAAGAACTGAATAAGCTG+AGG 0.666361 5_1:+48034411 Msa0734280:CDS
TGCTTAGGGTTGAAACTCAG+CGG 0.673294 5_1:+48033847 Msa0734280:CDS
AACCGGTAGAAGCATACAAG+GGG 0.673738 5_1:-48033560 None:intergenic
GAACCGGTAGAAGCATACAA+GGG 0.683674 5_1:-48033561 None:intergenic
ATCCTGCGCAGTATAAGACA+CGG 0.689588 5_1:+48033469 Msa0734280:CDS
CAAAATCTTGATAATCTCGG+GGG 0.705772 5_1:-48032947 None:intergenic
TCTTGCATTCAAAGCCGACG+CGG 0.707580 5_1:-48034246 None:intergenic
GATTCTTGTGACTATGCACA+CGG 0.716065 5_1:+48033426 Msa0734280:CDS
CTTTCCGAAACTCAGGACAA+GGG 0.724035 5_1:-48033386 None:intergenic
GTAGGGATCGAAACATTAGA+CGG 0.728881 5_1:-48033756 None:intergenic
GCTCCAGATGAAGTCAAAGG+CGG 0.734283 5_1:-48033696 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAGAAAAAAACTTGTCAAA+AGG + chr5_1:48032579-48032598 Msa0734280:CDS 20.0%
!! TAAGAAAAAAACTTGTCAAA+AGG + chr5_1:48032579-48032598 Msa0734280:CDS 20.0%
!! AAGCAAAATCTTGATAATCT+CGG - chr5_1:48032953-48032972 None:intergenic 25.0%
! ATCTGAATTAATATCTCTAG+CGG - chr5_1:48033820-48033839 None:intergenic 25.0%
!! AAGCAAAATCTTGATAATCT+CGG - chr5_1:48032953-48032972 None:intergenic 25.0%
! ATCTGAATTAATATCTCTAG+CGG - chr5_1:48033820-48033839 None:intergenic 25.0%
TTGTCAAAAGGATTTGATCA+TGG + chr5_1:48032591-48032610 Msa0734280:CDS 30.0%
TGTCAAAAGGATTTGATCAT+GGG + chr5_1:48032592-48032611 Msa0734280:CDS 30.0%
TATGTGAATGGGAATAAAGA+AGG + chr5_1:48032622-48032641 Msa0734280:CDS 30.0%
ATGTGAATGGGAATAAAGAA+GGG + chr5_1:48032623-48032642 Msa0734280:CDS 30.0%
AAAAAATGCGATTGAAAACG+AGG + chr5_1:48032705-48032724 Msa0734280:CDS 30.0%
AAAAATGCGATTGAAAACGA+GGG + chr5_1:48032706-48032725 Msa0734280:CDS 30.0%
!! AAAGTTGGTTCGAACAAATT+AGG + chr5_1:48032766-48032785 Msa0734280:CDS 30.0%
ACAAATTAGGTTATGAAGAG+AGG + chr5_1:48032779-48032798 Msa0734280:CDS 30.0%
! AGCAAAATCTTGATAATCTC+GGG - chr5_1:48032952-48032971 None:intergenic 30.0%
AAACAATCAAATCAACTGGT+CGG - chr5_1:48033017-48033036 None:intergenic 30.0%
ATGACATTGACGAATATCAA+AGG + chr5_1:48033142-48033161 Msa0734280:CDS 30.0%
TATATCCCATTCTTAATGTC+TGG - chr5_1:48033222-48033241 None:intergenic 30.0%
!! TATATAGTACCGATGAGTTT+AGG + chr5_1:48033238-48033257 Msa0734280:CDS 30.0%
TGTATACATCCTAAACTCAT+CGG - chr5_1:48033250-48033269 None:intergenic 30.0%
CAGCTATAATGATATTTCCT+TGG - chr5_1:48033363-48033382 None:intergenic 30.0%
ATTCAGATATTGCAATGCTT+AGG + chr5_1:48033832-48033851 Msa0734280:CDS 30.0%
TTCAGATATTGCAATGCTTA+GGG + chr5_1:48033833-48033852 Msa0734280:CDS 30.0%
AAAATGTCTTCAAGGTTTGT+AGG - chr5_1:48034017-48034036 None:intergenic 30.0%
! ACAAACCTTGAAGACATTTT+CGG + chr5_1:48034017-48034036 Msa0734280:CDS 30.0%
TGGAATTTATGCAACATTGA+TGG - chr5_1:48034053-48034072 None:intergenic 30.0%
TTGGGTTAATTCACTTGTAA+AGG + chr5_1:48034526-48034545 Msa0734280:CDS 30.0%
AATCTGTTCCATTGTTAAGA+TGG - chr5_1:48034613-48034632 None:intergenic 30.0%
TTGTCAAAAGGATTTGATCA+TGG + chr5_1:48032591-48032610 Msa0734280:CDS 30.0%
TGTCAAAAGGATTTGATCAT+GGG + chr5_1:48032592-48032611 Msa0734280:CDS 30.0%
TATGTGAATGGGAATAAAGA+AGG + chr5_1:48032622-48032641 Msa0734280:CDS 30.0%
ATGTGAATGGGAATAAAGAA+GGG + chr5_1:48032623-48032642 Msa0734280:CDS 30.0%
AAAAAATGCGATTGAAAACG+AGG + chr5_1:48032705-48032724 Msa0734280:CDS 30.0%
AAAAATGCGATTGAAAACGA+GGG + chr5_1:48032706-48032725 Msa0734280:CDS 30.0%
!! AAAGTTGGTTCGAACAAATT+AGG + chr5_1:48032766-48032785 Msa0734280:CDS 30.0%
ACAAATTAGGTTATGAAGAG+AGG + chr5_1:48032779-48032798 Msa0734280:CDS 30.0%
! AGCAAAATCTTGATAATCTC+GGG - chr5_1:48032952-48032971 None:intergenic 30.0%
AAACAATCAAATCAACTGGT+CGG - chr5_1:48033017-48033036 None:intergenic 30.0%
ATGACATTGACGAATATCAA+AGG + chr5_1:48033142-48033161 Msa0734280:CDS 30.0%
TATATCCCATTCTTAATGTC+TGG - chr5_1:48033222-48033241 None:intergenic 30.0%
!! TATATAGTACCGATGAGTTT+AGG + chr5_1:48033238-48033257 Msa0734280:CDS 30.0%
TGTATACATCCTAAACTCAT+CGG - chr5_1:48033250-48033269 None:intergenic 30.0%
CAGCTATAATGATATTTCCT+TGG - chr5_1:48033363-48033382 None:intergenic 30.0%
ATTCAGATATTGCAATGCTT+AGG + chr5_1:48033832-48033851 Msa0734280:CDS 30.0%
TTCAGATATTGCAATGCTTA+GGG + chr5_1:48033833-48033852 Msa0734280:CDS 30.0%
AAAATGTCTTCAAGGTTTGT+AGG - chr5_1:48034017-48034036 None:intergenic 30.0%
! ACAAACCTTGAAGACATTTT+CGG + chr5_1:48034017-48034036 Msa0734280:CDS 30.0%
TGGAATTTATGCAACATTGA+TGG - chr5_1:48034053-48034072 None:intergenic 30.0%
TTGGGTTAATTCACTTGTAA+AGG + chr5_1:48034526-48034545 Msa0734280:CDS 30.0%
AATCTGTTCCATTGTTAAGA+TGG - chr5_1:48034613-48034632 None:intergenic 30.0%
GTCAAAAGGATTTGATCATG+GGG + chr5_1:48032593-48032612 Msa0734280:CDS 35.0%
!! GATGTATCGGCTTATATTCT+TGG + chr5_1:48032838-48032857 Msa0734280:CDS 35.0%
CTTATATTCTTGGAACAGGT+CGG + chr5_1:48032848-48032867 Msa0734280:CDS 35.0%
TTATATTCTTGGAACAGGTC+GGG + chr5_1:48032849-48032868 Msa0734280:CDS 35.0%
! CAAAATCTTGATAATCTCGG+GGG - chr5_1:48032950-48032969 None:intergenic 35.0%
! GCAAAATCTTGATAATCTCG+GGG - chr5_1:48032951-48032970 None:intergenic 35.0%
! CAAGATTTTGCTTGATGCAT+CGG + chr5_1:48032960-48032979 Msa0734280:CDS 35.0%
AGCGAAACAATCAAATCAAC+TGG - chr5_1:48033021-48033040 None:intergenic 35.0%
!! AGTTGATTTGATTGTTTCGC+TGG + chr5_1:48033020-48033039 Msa0734280:CDS 35.0%
CCTTGGATTGAAGATAGAAT+TGG - chr5_1:48033046-48033065 None:intergenic 35.0%
CCAATTCTATCTTCAATCCA+AGG + chr5_1:48033043-48033062 Msa0734280:CDS 35.0%
TCAATGTCATCAATTGTCTC+CGG - chr5_1:48033132-48033151 None:intergenic 35.0%
!!! GGATAATCTTTTGAAACACG+AGG - chr5_1:48033183-48033202 None:intergenic 35.0%
TCTCTTCCAGACATTAAGAA+TGG + chr5_1:48033213-48033232 Msa0734280:CDS 35.0%
CTCTTCCAGACATTAAGAAT+GGG + chr5_1:48033214-48033233 Msa0734280:CDS 35.0%
TACTGCTTCTACATTAGAGA+TGG + chr5_1:48033614-48033633 Msa0734280:CDS 35.0%
ACTGCTTCTACATTAGAGAT+GGG + chr5_1:48033615-48033634 Msa0734280:CDS 35.0%
! CAAACCTTGAAGACATTTTC+GGG + chr5_1:48034018-48034037 Msa0734280:CDS 35.0%
!! TGCAGATGCTGATTCATATT+CGG - chr5_1:48034146-48034165 None:intergenic 35.0%
CTGCAACAAAACTATTCTTC+AGG + chr5_1:48034161-48034180 Msa0734280:CDS 35.0%
!!! AGCCTTATGCTTTTTCTAAC+TGG + chr5_1:48034351-48034370 Msa0734280:CDS 35.0%
!!! GCCTTATGCTTTTTCTAACT+GGG + chr5_1:48034352-48034371 Msa0734280:CDS 35.0%
!!! CCTTATGCTTTTTCTAACTG+GGG + chr5_1:48034353-48034372 Msa0734280:CDS 35.0%
AGTCCAATCCAAATTTCCAT+CGG - chr5_1:48034384-48034403 None:intergenic 35.0%
! AATTTGGATTGGACTTCACA+CGG + chr5_1:48034389-48034408 Msa0734280:CDS 35.0%
! CTGAGGAAATCATCTTCTTT+TGG + chr5_1:48034428-48034447 Msa0734280:CDS 35.0%
CTAAACTGATGAGATTCTTG+CGG - chr5_1:48034560-48034579 None:intergenic 35.0%
! TTAGCGTTGAAGATCAGAAA+AGG + chr5_1:48034576-48034595 Msa0734280:CDS 35.0%
GTCAAAAGGATTTGATCATG+GGG + chr5_1:48032593-48032612 Msa0734280:CDS 35.0%
!! GATGTATCGGCTTATATTCT+TGG + chr5_1:48032838-48032857 Msa0734280:CDS 35.0%
CTTATATTCTTGGAACAGGT+CGG + chr5_1:48032848-48032867 Msa0734280:CDS 35.0%
TTATATTCTTGGAACAGGTC+GGG + chr5_1:48032849-48032868 Msa0734280:CDS 35.0%
! CAAAATCTTGATAATCTCGG+GGG - chr5_1:48032950-48032969 None:intergenic 35.0%
! GCAAAATCTTGATAATCTCG+GGG - chr5_1:48032951-48032970 None:intergenic 35.0%
! CAAGATTTTGCTTGATGCAT+CGG + chr5_1:48032960-48032979 Msa0734280:CDS 35.0%
AGCGAAACAATCAAATCAAC+TGG - chr5_1:48033021-48033040 None:intergenic 35.0%
!! AGTTGATTTGATTGTTTCGC+TGG + chr5_1:48033020-48033039 Msa0734280:CDS 35.0%
CCTTGGATTGAAGATAGAAT+TGG - chr5_1:48033046-48033065 None:intergenic 35.0%
CCAATTCTATCTTCAATCCA+AGG + chr5_1:48033043-48033062 Msa0734280:CDS 35.0%
TCAATGTCATCAATTGTCTC+CGG - chr5_1:48033132-48033151 None:intergenic 35.0%
!!! GGATAATCTTTTGAAACACG+AGG - chr5_1:48033183-48033202 None:intergenic 35.0%
TCTCTTCCAGACATTAAGAA+TGG + chr5_1:48033213-48033232 Msa0734280:CDS 35.0%
CTCTTCCAGACATTAAGAAT+GGG + chr5_1:48033214-48033233 Msa0734280:CDS 35.0%
TACTGCTTCTACATTAGAGA+TGG + chr5_1:48033614-48033633 Msa0734280:CDS 35.0%
ACTGCTTCTACATTAGAGAT+GGG + chr5_1:48033615-48033634 Msa0734280:CDS 35.0%
! CAAACCTTGAAGACATTTTC+GGG + chr5_1:48034018-48034037 Msa0734280:CDS 35.0%
!! TGCAGATGCTGATTCATATT+CGG - chr5_1:48034146-48034165 None:intergenic 35.0%
CTGCAACAAAACTATTCTTC+AGG + chr5_1:48034161-48034180 Msa0734280:CDS 35.0%
!!! AGCCTTATGCTTTTTCTAAC+TGG + chr5_1:48034351-48034370 Msa0734280:CDS 35.0%
!!! GCCTTATGCTTTTTCTAACT+GGG + chr5_1:48034352-48034371 Msa0734280:CDS 35.0%
!!! CCTTATGCTTTTTCTAACTG+GGG + chr5_1:48034353-48034372 Msa0734280:CDS 35.0%
AGTCCAATCCAAATTTCCAT+CGG - chr5_1:48034384-48034403 None:intergenic 35.0%
! AATTTGGATTGGACTTCACA+CGG + chr5_1:48034389-48034408 Msa0734280:CDS 35.0%
! CTGAGGAAATCATCTTCTTT+TGG + chr5_1:48034428-48034447 Msa0734280:CDS 35.0%
CTAAACTGATGAGATTCTTG+CGG - chr5_1:48034560-48034579 None:intergenic 35.0%
! TTAGCGTTGAAGATCAGAAA+AGG + chr5_1:48034576-48034595 Msa0734280:CDS 35.0%
TAAAGAAGGGCAGTATCATG+AGG + chr5_1:48032636-48032655 Msa0734280:CDS 40.0%
! ATTTTCAGCTGCAGATGATG+TGG + chr5_1:48032675-48032694 Msa0734280:CDS 40.0%
TTGTGGTATGGAAGGAAAGT+TGG + chr5_1:48032751-48032770 Msa0734280:CDS 40.0%
GTATGGAAGCTTGGATGTAT+CGG + chr5_1:48032825-48032844 Msa0734280:CDS 40.0%
TCGGCTTATATTCTTGGAAC+AGG + chr5_1:48032844-48032863 Msa0734280:CDS 40.0%
GTTGATGTTAATCGGTCTAG+TGG + chr5_1:48032871-48032890 Msa0734280:CDS 40.0%
CTATCTTCAATCCAAGGAAG+AGG + chr5_1:48033049-48033068 Msa0734280:CDS 40.0%
! ATGCTACAAGCTCTTTTGGA+TGG + chr5_1:48033072-48033091 Msa0734280:CDS 40.0%
TCAGACATGTCTTCTGTTTC+CGG + chr5_1:48033110-48033129 Msa0734280:CDS 40.0%
!! TCAAAGTGAAGCCTTGTTCA+AGG + chr5_1:48033271-48033290 Msa0734280:CDS 40.0%
!! CAAAGTGAAGCCTTGTTCAA+GGG + chr5_1:48033272-48033291 Msa0734280:CDS 40.0%
TGAGAATAAGCCCTTGAACA+AGG - chr5_1:48033285-48033304 None:intergenic 40.0%
CAAGGGCTTATTCTCATGAT+TGG + chr5_1:48033289-48033308 Msa0734280:CDS 40.0%
! TTTTCCCCTGGATGAACAAA+GGG - chr5_1:48033324-48033343 None:intergenic 40.0%
! ATTTTCCCCTGGATGAACAA+AGG - chr5_1:48033325-48033344 None:intergenic 40.0%
GATTCTTGTGACTATGCACA+CGG + chr5_1:48033426-48033445 Msa0734280:CDS 40.0%
! AGTTTGCTTCTTTGCTCACA+AGG + chr5_1:48033524-48033543 Msa0734280:CDS 40.0%
CTGTAATACGATCTAGGAGA+TGG - chr5_1:48033594-48033613 None:intergenic 40.0%
GCAGTACTGTAATACGATCT+AGG - chr5_1:48033600-48033619 None:intergenic 40.0%
TCAATTAGCCCAATGTCACT+TGG + chr5_1:48033639-48033658 Msa0734280:CDS 40.0%
ATGGAGAACCAAGTGACATT+GGG - chr5_1:48033650-48033669 None:intergenic 40.0%
GTAGGGATCGAAACATTAGA+CGG - chr5_1:48033759-48033778 None:intergenic 40.0%
!! CCAGTCTTCAATCTGCTTTT+GGG - chr5_1:48033792-48033811 None:intergenic 40.0%
! TCCAGTCTTCAATCTGCTTT+TGG - chr5_1:48033793-48033812 None:intergenic 40.0%
ATGGAATGATTCCAGTTGGA+AGG - chr5_1:48033918-48033937 None:intergenic 40.0%
!! AAAAGATGGACTGTTAGGCA+TGG - chr5_1:48033937-48033956 None:intergenic 40.0%
GTTGAAGAAACCGGAAAAGA+TGG - chr5_1:48033951-48033970 None:intergenic 40.0%
! GTATGGTTGGTTGAAGAAAC+CGG - chr5_1:48033960-48033979 None:intergenic 40.0%
! CGAAAACCTATTTAGTTCCC+CGG - chr5_1:48033985-48034004 None:intergenic 40.0%
! CGGGGAACTAAATAGGTTTT+CGG + chr5_1:48033983-48034002 Msa0734280:CDS 40.0%
! GGGGAACTAAATAGGTTTTC+GGG + chr5_1:48033984-48034003 Msa0734280:CDS 40.0%
! GGGAACTAAATAGGTTTTCG+GGG + chr5_1:48033985-48034004 Msa0734280:CDS 40.0%
! GGAACTAAATAGGTTTTCGG+GGG + chr5_1:48033986-48034005 Msa0734280:CDS 40.0%
CAGCATCAAGTGAAATTCTG+TGG - chr5_1:48034073-48034092 None:intergenic 40.0%
AGAATTTCACTTGATGCTGC+AGG + chr5_1:48034074-48034093 Msa0734280:CDS 40.0%
TCTCAGTTACAATCTCCAAC+TGG + chr5_1:48034107-48034126 Msa0734280:CDS 40.0%
GATTCATATTCGGACGCATT+TGG - chr5_1:48034136-48034155 None:intergenic 40.0%
CAATCACACTAGAAGTGGAA+TGG - chr5_1:48034187-48034206 None:intergenic 40.0%
CATTCCACTTCTAGTGTGAT+TGG + chr5_1:48034185-48034204 Msa0734280:CDS 40.0%
GATGGATCAAACCTATAGGT+CGG - chr5_1:48034215-48034234 None:intergenic 40.0%
ACCTATAGGTTTGATCCATC+TGG + chr5_1:48034215-48034234 Msa0734280:CDS 40.0%
TCCAGATGGATCAAACCTAT+AGG - chr5_1:48034219-48034238 None:intergenic 40.0%
! GAGCTGCTGCATTTTCAAAA+CGG + chr5_1:48034267-48034286 Msa0734280:CDS 40.0%
GAGAATGAAGCTCAGAATGA+CGG - chr5_1:48034325-48034344 None:intergenic 40.0%
! GAAAAAGCATAAGGCTTAGC+AGG - chr5_1:48034347-48034366 None:intergenic 40.0%
! CCCCAGTTAGAAAAAGCATA+AGG - chr5_1:48034356-48034375 None:intergenic 40.0%
GTCCAATCCAAATTTCCATC+GGG - chr5_1:48034383-48034402 None:intergenic 40.0%
GAGAAGAACTGAATAAGCTG+AGG + chr5_1:48034411-48034430 Msa0734280:CDS 40.0%
ACTATGAACCAGATGTGTCT+TGG + chr5_1:48034507-48034526 Msa0734280:CDS 40.0%
CTATGAACCAGATGTGTCTT+GGG + chr5_1:48034508-48034527 Msa0734280:CDS 40.0%
GAATTAACCCAAGACACATC+TGG - chr5_1:48034518-48034537 None:intergenic 40.0%
CAATGGAACAGATTCGATTC+CGG + chr5_1:48034619-48034638 Msa0734280:CDS 40.0%
TTGGTTGGAGCAATTGTACA+TGG + chr5_1:48034643-48034662 Msa0734280:CDS 40.0%
TAAAGAAGGGCAGTATCATG+AGG + chr5_1:48032636-48032655 Msa0734280:CDS 40.0%
! ATTTTCAGCTGCAGATGATG+TGG + chr5_1:48032675-48032694 Msa0734280:CDS 40.0%
TTGTGGTATGGAAGGAAAGT+TGG + chr5_1:48032751-48032770 Msa0734280:CDS 40.0%
GTATGGAAGCTTGGATGTAT+CGG + chr5_1:48032825-48032844 Msa0734280:CDS 40.0%
TCGGCTTATATTCTTGGAAC+AGG + chr5_1:48032844-48032863 Msa0734280:CDS 40.0%
GTTGATGTTAATCGGTCTAG+TGG + chr5_1:48032871-48032890 Msa0734280:CDS 40.0%
CTATCTTCAATCCAAGGAAG+AGG + chr5_1:48033049-48033068 Msa0734280:CDS 40.0%
! ATGCTACAAGCTCTTTTGGA+TGG + chr5_1:48033072-48033091 Msa0734280:CDS 40.0%
TCAGACATGTCTTCTGTTTC+CGG + chr5_1:48033110-48033129 Msa0734280:CDS 40.0%
!! TCAAAGTGAAGCCTTGTTCA+AGG + chr5_1:48033271-48033290 Msa0734280:CDS 40.0%
!! CAAAGTGAAGCCTTGTTCAA+GGG + chr5_1:48033272-48033291 Msa0734280:CDS 40.0%
TGAGAATAAGCCCTTGAACA+AGG - chr5_1:48033285-48033304 None:intergenic 40.0%
CAAGGGCTTATTCTCATGAT+TGG + chr5_1:48033289-48033308 Msa0734280:CDS 40.0%
! TTTTCCCCTGGATGAACAAA+GGG - chr5_1:48033324-48033343 None:intergenic 40.0%
! ATTTTCCCCTGGATGAACAA+AGG - chr5_1:48033325-48033344 None:intergenic 40.0%
GATTCTTGTGACTATGCACA+CGG + chr5_1:48033426-48033445 Msa0734280:CDS 40.0%
! AGTTTGCTTCTTTGCTCACA+AGG + chr5_1:48033524-48033543 Msa0734280:CDS 40.0%
CTGTAATACGATCTAGGAGA+TGG - chr5_1:48033594-48033613 None:intergenic 40.0%
GCAGTACTGTAATACGATCT+AGG - chr5_1:48033600-48033619 None:intergenic 40.0%
TCAATTAGCCCAATGTCACT+TGG + chr5_1:48033639-48033658 Msa0734280:CDS 40.0%
ATGGAGAACCAAGTGACATT+GGG - chr5_1:48033650-48033669 None:intergenic 40.0%
GTAGGGATCGAAACATTAGA+CGG - chr5_1:48033759-48033778 None:intergenic 40.0%
!! CCAGTCTTCAATCTGCTTTT+GGG - chr5_1:48033792-48033811 None:intergenic 40.0%
! TCCAGTCTTCAATCTGCTTT+TGG - chr5_1:48033793-48033812 None:intergenic 40.0%
ATGGAATGATTCCAGTTGGA+AGG - chr5_1:48033918-48033937 None:intergenic 40.0%
!! AAAAGATGGACTGTTAGGCA+TGG - chr5_1:48033937-48033956 None:intergenic 40.0%
GTTGAAGAAACCGGAAAAGA+TGG - chr5_1:48033951-48033970 None:intergenic 40.0%
! GTATGGTTGGTTGAAGAAAC+CGG - chr5_1:48033960-48033979 None:intergenic 40.0%
! CGAAAACCTATTTAGTTCCC+CGG - chr5_1:48033985-48034004 None:intergenic 40.0%
! CGGGGAACTAAATAGGTTTT+CGG + chr5_1:48033983-48034002 Msa0734280:CDS 40.0%
! GGGGAACTAAATAGGTTTTC+GGG + chr5_1:48033984-48034003 Msa0734280:CDS 40.0%
! GGGAACTAAATAGGTTTTCG+GGG + chr5_1:48033985-48034004 Msa0734280:CDS 40.0%
! GGAACTAAATAGGTTTTCGG+GGG + chr5_1:48033986-48034005 Msa0734280:CDS 40.0%
CAGCATCAAGTGAAATTCTG+TGG - chr5_1:48034073-48034092 None:intergenic 40.0%
AGAATTTCACTTGATGCTGC+AGG + chr5_1:48034074-48034093 Msa0734280:CDS 40.0%
TCTCAGTTACAATCTCCAAC+TGG + chr5_1:48034107-48034126 Msa0734280:CDS 40.0%
GATTCATATTCGGACGCATT+TGG - chr5_1:48034136-48034155 None:intergenic 40.0%
CAATCACACTAGAAGTGGAA+TGG - chr5_1:48034187-48034206 None:intergenic 40.0%
CATTCCACTTCTAGTGTGAT+TGG + chr5_1:48034185-48034204 Msa0734280:CDS 40.0%
GATGGATCAAACCTATAGGT+CGG - chr5_1:48034215-48034234 None:intergenic 40.0%
ACCTATAGGTTTGATCCATC+TGG + chr5_1:48034215-48034234 Msa0734280:CDS 40.0%
TCCAGATGGATCAAACCTAT+AGG - chr5_1:48034219-48034238 None:intergenic 40.0%
! GAGCTGCTGCATTTTCAAAA+CGG + chr5_1:48034267-48034286 Msa0734280:CDS 40.0%
GAGAATGAAGCTCAGAATGA+CGG - chr5_1:48034325-48034344 None:intergenic 40.0%
! GAAAAAGCATAAGGCTTAGC+AGG - chr5_1:48034347-48034366 None:intergenic 40.0%
! CCCCAGTTAGAAAAAGCATA+AGG - chr5_1:48034356-48034375 None:intergenic 40.0%
GTCCAATCCAAATTTCCATC+GGG - chr5_1:48034383-48034402 None:intergenic 40.0%
GAGAAGAACTGAATAAGCTG+AGG + chr5_1:48034411-48034430 Msa0734280:CDS 40.0%
ACTATGAACCAGATGTGTCT+TGG + chr5_1:48034507-48034526 Msa0734280:CDS 40.0%
CTATGAACCAGATGTGTCTT+GGG + chr5_1:48034508-48034527 Msa0734280:CDS 40.0%
GAATTAACCCAAGACACATC+TGG - chr5_1:48034518-48034537 None:intergenic 40.0%
CAATGGAACAGATTCGATTC+CGG + chr5_1:48034619-48034638 Msa0734280:CDS 40.0%
TTGGTTGGAGCAATTGTACA+TGG + chr5_1:48034643-48034662 Msa0734280:CDS 40.0%
ATGGGGTGTGAGTATGTGAA+TGG + chr5_1:48032610-48032629 Msa0734280:CDS 45.0%
TGGGGTGTGAGTATGTGAAT+GGG + chr5_1:48032611-48032630 Msa0734280:CDS 45.0%
!! ATGTTGATGGGGTTGGTTTG+TGG + chr5_1:48032734-48032753 Msa0734280:CDS 45.0%
TACATAGCTGCAACCATGAG+AGG - chr5_1:48032808-48032827 None:intergenic 45.0%
CTCATGGTTGCAGCTATGTA+TGG + chr5_1:48032808-48032827 Msa0734280:CDS 45.0%
TGCAGCTATGTATGGAAGCT+TGG + chr5_1:48032816-48032835 Msa0734280:CDS 45.0%
!! CAGGTCGGGTTGATGTTAAT+CGG + chr5_1:48032863-48032882 Msa0734280:CDS 45.0%
ATGAAGAGCAGTAGCACCAT+CGG - chr5_1:48032899-48032918 None:intergenic 45.0%
TGCTACTGCTCTTCATTGTG+CGG + chr5_1:48032903-48032922 Msa0734280:CDS 45.0%
CTCTTCATTGTGCGGTTGTT+GGG + chr5_1:48032911-48032930 Msa0734280:CDS 45.0%
TCTTCATTGTGCGGTTGTTG+GGG + chr5_1:48032912-48032931 Msa0734280:CDS 45.0%
! GATTTTGCTTGATGCATCGG+CGG + chr5_1:48032963-48032982 Msa0734280:CDS 45.0%
! GAGGATGCTACAAGCTCTTT+TGG + chr5_1:48033068-48033087 Msa0734280:CDS 45.0%
! GCTCTTTTGGATGGTACAGA+CGG + chr5_1:48033081-48033100 Msa0734280:CDS 45.0%
TCTGGAAGAGAGACATCAAC+AGG - chr5_1:48033204-48033223 None:intergenic 45.0%
TGGATGAACAAAGGGACACT+CGG - chr5_1:48033316-48033335 None:intergenic 45.0%
AGTGTCCCTTTGTTCATCCA+GGG + chr5_1:48033316-48033335 Msa0734280:CDS 45.0%
TTCATCCAGGGGAAAATGCA+AGG + chr5_1:48033328-48033347 Msa0734280:CDS 45.0%
CTTTCCGAAACTCAGGACAA+GGG - chr5_1:48033389-48033408 None:intergenic 45.0%
!!! CACACGGTATTTTTGAGTGC+TGG + chr5_1:48033442-48033461 Msa0734280:CDS 45.0%
ATCCTGCGCAGTATAAGACA+CGG + chr5_1:48033469-48033488 Msa0734280:CDS 45.0%
GTATAAGACACGGCTTTGCA+AGG + chr5_1:48033479-48033498 Msa0734280:CDS 45.0%
! AACCGGTAGAAGCATACAAG+GGG - chr5_1:48033563-48033582 None:intergenic 45.0%
! GAACCGGTAGAAGCATACAA+GGG - chr5_1:48033564-48033583 None:intergenic 45.0%
! AGAACCGGTAGAAGCATACA+AGG - chr5_1:48033565-48033584 None:intergenic 45.0%
AGGAGATGGAATAGCAGAAC+CGG - chr5_1:48033580-48033599 None:intergenic 45.0%
GATGGAGAACCAAGTGACAT+TGG - chr5_1:48033651-48033670 None:intergenic 45.0%
GAGGGTGGTATCAAAACAGA+TGG - chr5_1:48033669-48033688 None:intergenic 45.0%
GATGCTCCAGATGAAGTCAA+AGG - chr5_1:48033702-48033721 None:intergenic 45.0%
!! TTTTGGGAAGCTGAAGGGTA+GGG - chr5_1:48033776-48033795 None:intergenic 45.0%
!! TCTGCTTTTGGGAAGCTGAA+GGG - chr5_1:48033781-48033800 None:intergenic 45.0%
!! ATCTGCTTTTGGGAAGCTGA+AGG - chr5_1:48033782-48033801 None:intergenic 45.0%
CCCAAAAGCAGATTGAAGAC+TGG + chr5_1:48033789-48033808 Msa0734280:CDS 45.0%
TGCTTAGGGTTGAAACTCAG+CGG + chr5_1:48033847-48033866 Msa0734280:CDS 45.0%
! CTACTGATGGATGAGATGTC+CGG + chr5_1:48033882-48033901 Msa0734280:CDS 45.0%
ATGATTCCAGTTGGAAGGAG+AGG - chr5_1:48033913-48033932 None:intergenic 45.0%
AGGCATGGAATGATTCCAGT+TGG - chr5_1:48033922-48033941 None:intergenic 45.0%
! GCCTAACAGTCCATCTTTTC+CGG + chr5_1:48033938-48033957 Msa0734280:CDS 45.0%
!! ACCGGAAAAGATGGACTGTT+AGG - chr5_1:48033942-48033961 None:intergenic 45.0%
TCTTCAACCAACCATACGAC+CGG + chr5_1:48033963-48033982 Msa0734280:CDS 45.0%
! TATTTAGTTCCCCGGTCGTA+TGG - chr5_1:48033977-48033996 None:intergenic 45.0%
ATACGACCGGGGAACTAAAT+AGG + chr5_1:48033976-48033995 Msa0734280:CDS 45.0%
GAGACCCGAAAATGTCTTCA+AGG - chr5_1:48034025-48034044 None:intergenic 45.0%
CGATCCAATCACACTAGAAG+TGG - chr5_1:48034192-48034211 None:intergenic 45.0%
CACCCGATGGAAATTTGGAT+TGG + chr5_1:48034378-48034397 Msa0734280:CDS 45.0%
!! TGGAGTTAAAGGAGTACTGG+TGG - chr5_1:48034462-48034481 None:intergenic 45.0%
! AGCTGGAGTTAAAGGAGTAC+TGG - chr5_1:48034465-48034484 None:intergenic 45.0%
TTTAACTCCAGCTGCAGCTA+GGG + chr5_1:48034472-48034491 Msa0734280:CDS 45.0%
TACAATTGCTCCAACCAAGC+CGG - chr5_1:48034641-48034660 None:intergenic 45.0%
GGAGCAATTGTACATGGATC+AGG + chr5_1:48034649-48034668 Msa0734280:CDS 45.0%
ATGGGGTGTGAGTATGTGAA+TGG + chr5_1:48032610-48032629 Msa0734280:CDS 45.0%
TGGGGTGTGAGTATGTGAAT+GGG + chr5_1:48032611-48032630 Msa0734280:CDS 45.0%
!! ATGTTGATGGGGTTGGTTTG+TGG + chr5_1:48032734-48032753 Msa0734280:CDS 45.0%
TACATAGCTGCAACCATGAG+AGG - chr5_1:48032808-48032827 None:intergenic 45.0%
CTCATGGTTGCAGCTATGTA+TGG + chr5_1:48032808-48032827 Msa0734280:CDS 45.0%
TGCAGCTATGTATGGAAGCT+TGG + chr5_1:48032816-48032835 Msa0734280:CDS 45.0%
!! CAGGTCGGGTTGATGTTAAT+CGG + chr5_1:48032863-48032882 Msa0734280:CDS 45.0%
ATGAAGAGCAGTAGCACCAT+CGG - chr5_1:48032899-48032918 None:intergenic 45.0%
TGCTACTGCTCTTCATTGTG+CGG + chr5_1:48032903-48032922 Msa0734280:CDS 45.0%
CTCTTCATTGTGCGGTTGTT+GGG + chr5_1:48032911-48032930 Msa0734280:CDS 45.0%
TCTTCATTGTGCGGTTGTTG+GGG + chr5_1:48032912-48032931 Msa0734280:CDS 45.0%
! GATTTTGCTTGATGCATCGG+CGG + chr5_1:48032963-48032982 Msa0734280:CDS 45.0%
! GAGGATGCTACAAGCTCTTT+TGG + chr5_1:48033068-48033087 Msa0734280:CDS 45.0%
! GCTCTTTTGGATGGTACAGA+CGG + chr5_1:48033081-48033100 Msa0734280:CDS 45.0%
TCTGGAAGAGAGACATCAAC+AGG - chr5_1:48033204-48033223 None:intergenic 45.0%
TGGATGAACAAAGGGACACT+CGG - chr5_1:48033316-48033335 None:intergenic 45.0%
AGTGTCCCTTTGTTCATCCA+GGG + chr5_1:48033316-48033335 Msa0734280:CDS 45.0%
TTCATCCAGGGGAAAATGCA+AGG + chr5_1:48033328-48033347 Msa0734280:CDS 45.0%
CTTTCCGAAACTCAGGACAA+GGG - chr5_1:48033389-48033408 None:intergenic 45.0%
!!! CACACGGTATTTTTGAGTGC+TGG + chr5_1:48033442-48033461 Msa0734280:CDS 45.0%
ATCCTGCGCAGTATAAGACA+CGG + chr5_1:48033469-48033488 Msa0734280:CDS 45.0%
GTATAAGACACGGCTTTGCA+AGG + chr5_1:48033479-48033498 Msa0734280:CDS 45.0%
! AACCGGTAGAAGCATACAAG+GGG - chr5_1:48033563-48033582 None:intergenic 45.0%
! GAACCGGTAGAAGCATACAA+GGG - chr5_1:48033564-48033583 None:intergenic 45.0%
! AGAACCGGTAGAAGCATACA+AGG - chr5_1:48033565-48033584 None:intergenic 45.0%
AGGAGATGGAATAGCAGAAC+CGG - chr5_1:48033580-48033599 None:intergenic 45.0%
GATGGAGAACCAAGTGACAT+TGG - chr5_1:48033651-48033670 None:intergenic 45.0%
GAGGGTGGTATCAAAACAGA+TGG - chr5_1:48033669-48033688 None:intergenic 45.0%
GATGCTCCAGATGAAGTCAA+AGG - chr5_1:48033702-48033721 None:intergenic 45.0%
!! TTTTGGGAAGCTGAAGGGTA+GGG - chr5_1:48033776-48033795 None:intergenic 45.0%
!! TCTGCTTTTGGGAAGCTGAA+GGG - chr5_1:48033781-48033800 None:intergenic 45.0%
!! ATCTGCTTTTGGGAAGCTGA+AGG - chr5_1:48033782-48033801 None:intergenic 45.0%
CCCAAAAGCAGATTGAAGAC+TGG + chr5_1:48033789-48033808 Msa0734280:CDS 45.0%
TGCTTAGGGTTGAAACTCAG+CGG + chr5_1:48033847-48033866 Msa0734280:CDS 45.0%
! CTACTGATGGATGAGATGTC+CGG + chr5_1:48033882-48033901 Msa0734280:CDS 45.0%
ATGATTCCAGTTGGAAGGAG+AGG - chr5_1:48033913-48033932 None:intergenic 45.0%
AGGCATGGAATGATTCCAGT+TGG - chr5_1:48033922-48033941 None:intergenic 45.0%
! GCCTAACAGTCCATCTTTTC+CGG + chr5_1:48033938-48033957 Msa0734280:CDS 45.0%
!! ACCGGAAAAGATGGACTGTT+AGG - chr5_1:48033942-48033961 None:intergenic 45.0%
TCTTCAACCAACCATACGAC+CGG + chr5_1:48033963-48033982 Msa0734280:CDS 45.0%
! TATTTAGTTCCCCGGTCGTA+TGG - chr5_1:48033977-48033996 None:intergenic 45.0%
ATACGACCGGGGAACTAAAT+AGG + chr5_1:48033976-48033995 Msa0734280:CDS 45.0%
GAGACCCGAAAATGTCTTCA+AGG - chr5_1:48034025-48034044 None:intergenic 45.0%
CGATCCAATCACACTAGAAG+TGG - chr5_1:48034192-48034211 None:intergenic 45.0%
CACCCGATGGAAATTTGGAT+TGG + chr5_1:48034378-48034397 Msa0734280:CDS 45.0%
!! TGGAGTTAAAGGAGTACTGG+TGG - chr5_1:48034462-48034481 None:intergenic 45.0%
! AGCTGGAGTTAAAGGAGTAC+TGG - chr5_1:48034465-48034484 None:intergenic 45.0%
TTTAACTCCAGCTGCAGCTA+GGG + chr5_1:48034472-48034491 Msa0734280:CDS 45.0%
TACAATTGCTCCAACCAAGC+CGG - chr5_1:48034641-48034660 None:intergenic 45.0%
GGAGCAATTGTACATGGATC+AGG + chr5_1:48034649-48034668 Msa0734280:CDS 45.0%
TCAGCTGCAGATGATGTGGT+TGG + chr5_1:48032679-48032698 Msa0734280:CDS 50.0%
AACGAGGGTTGCGATGTTGA+TGG + chr5_1:48032721-48032740 Msa0734280:CDS 50.0%
ACGAGGGTTGCGATGTTGAT+GGG + chr5_1:48032722-48032741 Msa0734280:CDS 50.0%
!! GATGGGGTTGGTTTGTGGTA+TGG + chr5_1:48032739-48032758 Msa0734280:CDS 50.0%
!! GGGTTGGTTTGTGGTATGGA+AGG + chr5_1:48032743-48032762 Msa0734280:CDS 50.0%
TGAAGAGAGGACACCTCTCA+TGG + chr5_1:48032792-48032811 Msa0734280:CDS 50.0%
! AATCGGTCTAGTGGATCCGA+TGG + chr5_1:48032880-48032899 Msa0734280:CDS 50.0%
GCTCTTCATTGTGCGGTTGT+TGG + chr5_1:48032910-48032929 Msa0734280:CDS 50.0%
CTTCATTGTGCGGTTGTTGG+GGG + chr5_1:48032913-48032932 Msa0734280:CDS 50.0%
! GCTAGTGCTGTTGATGCCAA+CGG + chr5_1:48032988-48033007 Msa0734280:CDS 50.0%
ATCAACTGGTCGGTTACCGT+TGG - chr5_1:48033007-48033026 None:intergenic 50.0%
GCTTGTAGCATCCTCTTCCT+TGG - chr5_1:48033063-48033082 None:intergenic 50.0%
GAGTGTCCCTTTGTTCATCC+AGG + chr5_1:48033315-48033334 Msa0734280:CDS 50.0%
GTGTCCCTTTGTTCATCCAG+GGG + chr5_1:48033317-48033336 Msa0734280:CDS 50.0%
GTGTCCCTTGTCCTGAGTTT+CGG + chr5_1:48033382-48033401 Msa0734280:CDS 50.0%
CCTTTCCGAAACTCAGGACA+AGG - chr5_1:48033390-48033409 None:intergenic 50.0%
CCTTGTCCTGAGTTTCGGAA+AGG + chr5_1:48033387-48033406 Msa0734280:CDS 50.0%
CACGATCCTTTCCGAAACTC+AGG - chr5_1:48033396-48033415 None:intergenic 50.0%
CGGAAAGGATCGTGCAGTAA+AGG + chr5_1:48033402-48033421 Msa0734280:CDS 50.0%
ACACGGCTTTGCAAGGATGA+AGG + chr5_1:48033486-48033505 Msa0734280:CDS 50.0%
CTTCTTTGCTCACAAGGTCG+AGG + chr5_1:48033530-48033549 Msa0734280:CDS 50.0%
GCTCCAGATGAAGTCAAAGG+CGG - chr5_1:48033699-48033718 None:intergenic 50.0%
ATTAGACGGTGTCTGCCACA+TGG - chr5_1:48033745-48033764 None:intergenic 50.0%
!! CTTTTGGGAAGCTGAAGGGT+AGG - chr5_1:48033777-48033796 None:intergenic 50.0%
GCGAAAGCAGCAACTACTGA+TGG + chr5_1:48033869-48033888 Msa0734280:CDS 50.0%
GTTGGAAGGAGAGGAAAGAC+CGG - chr5_1:48033904-48033923 None:intergenic 50.0%
GTCTTTCCTCTCCTTCCAAC+TGG + chr5_1:48033904-48033923 Msa0734280:CDS 50.0%
CTTCAACCAACCATACGACC+GGG + chr5_1:48033964-48033983 Msa0734280:CDS 50.0%
TTCAACCAACCATACGACCG+GGG + chr5_1:48033965-48033984 Msa0734280:CDS 50.0%
GGACGCATTTGGATTCCAGT+TGG - chr5_1:48034125-48034144 None:intergenic 50.0%
TGATTGGATCGCCGACCTAT+AGG + chr5_1:48034201-48034220 Msa0734280:CDS 50.0%
ATCTGGAGAGTTATCCGCGT+CGG + chr5_1:48034232-48034251 Msa0734280:CDS 50.0%
TCTTGCATTCAAAGCCGACG+CGG - chr5_1:48034249-48034268 None:intergenic 50.0%
CTAGCTGCAGCTGGAGTTAA+AGG - chr5_1:48034473-48034492 None:intergenic 50.0%
CTTTAACTCCAGCTGCAGCT+AGG + chr5_1:48034471-48034490 Msa0734280:CDS 50.0%
CTGCAGCGCCATCTTAACAA+TGG + chr5_1:48034602-48034621 Msa0734280:CDS 50.0%
GAACAGATTCGATTCCGGCT+TGG + chr5_1:48034624-48034643 Msa0734280:CDS 50.0%
!! AGATTCGATTCCGGCTTGGT+TGG + chr5_1:48034628-48034647 Msa0734280:CDS 50.0%
TCAGCTGCAGATGATGTGGT+TGG + chr5_1:48032679-48032698 Msa0734280:CDS 50.0%
AACGAGGGTTGCGATGTTGA+TGG + chr5_1:48032721-48032740 Msa0734280:CDS 50.0%
ACGAGGGTTGCGATGTTGAT+GGG + chr5_1:48032722-48032741 Msa0734280:CDS 50.0%
!! GATGGGGTTGGTTTGTGGTA+TGG + chr5_1:48032739-48032758 Msa0734280:CDS 50.0%
!! GGGTTGGTTTGTGGTATGGA+AGG + chr5_1:48032743-48032762 Msa0734280:CDS 50.0%
TGAAGAGAGGACACCTCTCA+TGG + chr5_1:48032792-48032811 Msa0734280:CDS 50.0%
! AATCGGTCTAGTGGATCCGA+TGG + chr5_1:48032880-48032899 Msa0734280:CDS 50.0%
GCTCTTCATTGTGCGGTTGT+TGG + chr5_1:48032910-48032929 Msa0734280:CDS 50.0%
CTTCATTGTGCGGTTGTTGG+GGG + chr5_1:48032913-48032932 Msa0734280:CDS 50.0%
! GCTAGTGCTGTTGATGCCAA+CGG + chr5_1:48032988-48033007 Msa0734280:CDS 50.0%
ATCAACTGGTCGGTTACCGT+TGG - chr5_1:48033007-48033026 None:intergenic 50.0%
GCTTGTAGCATCCTCTTCCT+TGG - chr5_1:48033063-48033082 None:intergenic 50.0%
GAGTGTCCCTTTGTTCATCC+AGG + chr5_1:48033315-48033334 Msa0734280:CDS 50.0%
GTGTCCCTTTGTTCATCCAG+GGG + chr5_1:48033317-48033336 Msa0734280:CDS 50.0%
GTGTCCCTTGTCCTGAGTTT+CGG + chr5_1:48033382-48033401 Msa0734280:CDS 50.0%
CCTTTCCGAAACTCAGGACA+AGG - chr5_1:48033390-48033409 None:intergenic 50.0%
CCTTGTCCTGAGTTTCGGAA+AGG + chr5_1:48033387-48033406 Msa0734280:CDS 50.0%
CACGATCCTTTCCGAAACTC+AGG - chr5_1:48033396-48033415 None:intergenic 50.0%
CGGAAAGGATCGTGCAGTAA+AGG + chr5_1:48033402-48033421 Msa0734280:CDS 50.0%
ACACGGCTTTGCAAGGATGA+AGG + chr5_1:48033486-48033505 Msa0734280:CDS 50.0%
CTTCTTTGCTCACAAGGTCG+AGG + chr5_1:48033530-48033549 Msa0734280:CDS 50.0%
GCTCCAGATGAAGTCAAAGG+CGG - chr5_1:48033699-48033718 None:intergenic 50.0%
ATTAGACGGTGTCTGCCACA+TGG - chr5_1:48033745-48033764 None:intergenic 50.0%
!! CTTTTGGGAAGCTGAAGGGT+AGG - chr5_1:48033777-48033796 None:intergenic 50.0%
GCGAAAGCAGCAACTACTGA+TGG + chr5_1:48033869-48033888 Msa0734280:CDS 50.0%
GTTGGAAGGAGAGGAAAGAC+CGG - chr5_1:48033904-48033923 None:intergenic 50.0%
GTCTTTCCTCTCCTTCCAAC+TGG + chr5_1:48033904-48033923 Msa0734280:CDS 50.0%
CTTCAACCAACCATACGACC+GGG + chr5_1:48033964-48033983 Msa0734280:CDS 50.0%
TTCAACCAACCATACGACCG+GGG + chr5_1:48033965-48033984 Msa0734280:CDS 50.0%
GGACGCATTTGGATTCCAGT+TGG - chr5_1:48034125-48034144 None:intergenic 50.0%
TGATTGGATCGCCGACCTAT+AGG + chr5_1:48034201-48034220 Msa0734280:CDS 50.0%
ATCTGGAGAGTTATCCGCGT+CGG + chr5_1:48034232-48034251 Msa0734280:CDS 50.0%
TCTTGCATTCAAAGCCGACG+CGG - chr5_1:48034249-48034268 None:intergenic 50.0%
CTAGCTGCAGCTGGAGTTAA+AGG - chr5_1:48034473-48034492 None:intergenic 50.0%
CTTTAACTCCAGCTGCAGCT+AGG + chr5_1:48034471-48034490 Msa0734280:CDS 50.0%
CTGCAGCGCCATCTTAACAA+TGG + chr5_1:48034602-48034621 Msa0734280:CDS 50.0%
GAACAGATTCGATTCCGGCT+TGG + chr5_1:48034624-48034643 Msa0734280:CDS 50.0%
!! AGATTCGATTCCGGCTTGGT+TGG + chr5_1:48034628-48034647 Msa0734280:CDS 50.0%
CGAGGGTTGCGATGTTGATG+GGG + chr5_1:48032723-48032742 Msa0734280:CDS 55.0%
! GGTTGCGATGTTGATGGGGT+TGG + chr5_1:48032727-48032746 Msa0734280:CDS 55.0%
AGCCGTGTCTTATACTGCGC+AGG - chr5_1:48033474-48033493 None:intergenic 55.0%
CGCCCCTTGTATGCTTCTAC+CGG + chr5_1:48033558-48033577 Msa0734280:CDS 55.0%
TGAAGTCAAAGGCGGCGTTG+AGG - chr5_1:48033691-48033710 None:intergenic 55.0%
! ACGCCGCCTTTGACTTCATC+TGG + chr5_1:48033693-48033712 Msa0734280:CDS 55.0%
TAGTTCCCCGGTCGTATGGT+TGG - chr5_1:48033973-48033992 None:intergenic 55.0%
GACGCGGATAACTCTCCAGA+TGG - chr5_1:48034233-48034252 None:intergenic 55.0%
CACTGCGCTCGATAAAGCTC+TGG - chr5_1:48034295-48034314 None:intergenic 55.0%
GGGCTCACCCGATGGAAATT+TGG + chr5_1:48034373-48034392 Msa0734280:CDS 55.0%
CGAGGGTTGCGATGTTGATG+GGG + chr5_1:48032723-48032742 Msa0734280:CDS 55.0%
! GGTTGCGATGTTGATGGGGT+TGG + chr5_1:48032727-48032746 Msa0734280:CDS 55.0%
AGCCGTGTCTTATACTGCGC+AGG - chr5_1:48033474-48033493 None:intergenic 55.0%
CGCCCCTTGTATGCTTCTAC+CGG + chr5_1:48033558-48033577 Msa0734280:CDS 55.0%
TGAAGTCAAAGGCGGCGTTG+AGG - chr5_1:48033691-48033710 None:intergenic 55.0%
! ACGCCGCCTTTGACTTCATC+TGG + chr5_1:48033693-48033712 Msa0734280:CDS 55.0%
TAGTTCCCCGGTCGTATGGT+TGG - chr5_1:48033973-48033992 None:intergenic 55.0%
GACGCGGATAACTCTCCAGA+TGG - chr5_1:48034233-48034252 None:intergenic 55.0%
CACTGCGCTCGATAAAGCTC+TGG - chr5_1:48034295-48034314 None:intergenic 55.0%
GGGCTCACCCGATGGAAATT+TGG + chr5_1:48034373-48034392 Msa0734280:CDS 55.0%
! CGTCGCCTTGCATTTTCCCC+TGG - chr5_1:48033336-48033355 None:intergenic 60.0%
ATGCAAGGCGACGCGATCCA+AGG + chr5_1:48033343-48033362 Msa0734280:CDS 60.0%
! GTCAAAGGCGGCGTTGAGGA+GGG - chr5_1:48033687-48033706 None:intergenic 60.0%
! AGTCAAAGGCGGCGTTGAGG+AGG - chr5_1:48033688-48033707 None:intergenic 60.0%
CACATGGCTGCAGCAGCAAC+GGG - chr5_1:48033729-48033748 None:intergenic 60.0%
CCACATGGCTGCAGCAGCAA+CGG - chr5_1:48033730-48033749 None:intergenic 60.0%
CTTGATGCTGCAGGAGCAGC+AGG + chr5_1:48034083-48034102 Msa0734280:CDS 60.0%
TCTAACTGGGGCTCACCCGA+TGG + chr5_1:48034365-48034384 Msa0734280:CDS 60.0%
! CGTCGCCTTGCATTTTCCCC+TGG - chr5_1:48033336-48033355 None:intergenic 60.0%
ATGCAAGGCGACGCGATCCA+AGG + chr5_1:48033343-48033362 Msa0734280:CDS 60.0%
! GTCAAAGGCGGCGTTGAGGA+GGG - chr5_1:48033687-48033706 None:intergenic 60.0%
! AGTCAAAGGCGGCGTTGAGG+AGG - chr5_1:48033688-48033707 None:intergenic 60.0%
CACATGGCTGCAGCAGCAAC+GGG - chr5_1:48033729-48033748 None:intergenic 60.0%
CCACATGGCTGCAGCAGCAA+CGG - chr5_1:48033730-48033749 None:intergenic 60.0%
CTTGATGCTGCAGGAGCAGC+AGG + chr5_1:48034083-48034102 Msa0734280:CDS 60.0%
TCTAACTGGGGCTCACCCGA+TGG + chr5_1:48034365-48034384 Msa0734280:CDS 60.0%
! AAAGGCGGCGTTGAGGAGGG+TGG - chr5_1:48033684-48033703 None:intergenic 65.0%
CCGTTGCTGCTGCAGCCATG+TGG + chr5_1:48033727-48033746 Msa0734280:CDS 65.0%
TCCAGCTGCAGCTAGGGCAC+AGG + chr5_1:48034478-48034497 Msa0734280:CDS 65.0%
TCCTGTGCCCTAGCTGCAGC+TGG - chr5_1:48034482-48034501 None:intergenic 65.0%
! AAAGGCGGCGTTGAGGAGGG+TGG - chr5_1:48033684-48033703 None:intergenic 65.0%
CCGTTGCTGCTGCAGCCATG+TGG + chr5_1:48033727-48033746 Msa0734280:CDS 65.0%
TCCAGCTGCAGCTAGGGCAC+AGG + chr5_1:48034478-48034497 Msa0734280:CDS 65.0%
TCCTGTGCCCTAGCTGCAGC+TGG - chr5_1:48034482-48034501 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 48032565 48034688 48032565 ID=Msa0734280;Name=Msa0734280
chr5_1 mRNA 48032565 48034688 48032565 ID=Msa0734280-mRNA-1;Parent=Msa0734280;Name=Msa0734280-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|-1|0|1|-1|1|1|0|707
chr5_1 exon 48032565 48034688 48032565 ID=Msa0734280-mRNA-1:exon:13749;Parent=Msa0734280-mRNA-1
chr5_1 CDS 48032565 48034688 48032565 ID=Msa0734280-mRNA-1:cds;Parent=Msa0734280-mRNA-1
Gene Sequence

>Msa0734280

ATGTGCAGTGATTCTAAGAAAAAAACTTGTCAAAAGGATTTGATCATGGGGTGTGAGTATGTGAATGGGAATAAAGAAGGGCAGTATCATGAGGTTTCTTATTTGCTTGAATTTTCAGCTGCAGATGATGTGGTTGGTTTAAAAAATGCGATTGAAAACGAGGGTTGCGATGTTGATGGGGTTGGTTTGTGGTATGGAAGGAAAGTTGGTTCGAACAAATTAGGTTATGAAGAGAGGACACCTCTCATGGTTGCAGCTATGTATGGAAGCTTGGATGTATCGGCTTATATTCTTGGAACAGGTCGGGTTGATGTTAATCGGTCTAGTGGATCCGATGGTGCTACTGCTCTTCATTGTGCGGTTGTTGGGGGTTCTGCTGCTTCCCCCGAGATTATCAAGATTTTGCTTGATGCATCGGCGGATGCTAGTGCTGTTGATGCCAACGGTAACCGACCAGTTGATTTGATTGTTTCGCTGGCCAATTCTATCTTCAATCCAAGGAAGAGGATGCTACAAGCTCTTTTGGATGGTACAGACGGTGCTGATCAGACATGTCTTCTGTTTCCGGAGACAATTGATGACATTGACGAATATCAAAGGCAAGATGTAAACACGCCTCGTGTTTCAAAAGATTATCCTGTTGATGTCTCTCTTCCAGACATTAAGAATGGGATATATAGTACCGATGAGTTTAGGATGTATACATTCAAAGTGAAGCCTTGTTCAAGGGCTTATTCTCATGATTGGACCGAGTGTCCCTTTGTTCATCCAGGGGAAAATGCAAGGCGACGCGATCCAAGGAAATATCATTATAGCTGTGTCCCTTGTCCTGAGTTTCGGAAAGGATCGTGCAGTAAAGGAGATTCTTGTGACTATGCACACGGTATTTTTGAGTGCTGGCTTCATCCTGCGCAGTATAAGACACGGCTTTGCAAGGATGAAGGTTCATGCATGAGAAGAGTTTGCTTCTTTGCTCACAAGGTCGAGGAGCTTCGCCCCTTGTATGCTTCTACCGGTTCTGCTATTCCATCTCCTAGATCGTATTACAGTACTGCTTCTACATTAGAGATGGGTTCAATTAGCCCAATGTCACTTGGTTCTCCATCTGTTTTGATACCACCCTCCTCAACGCCGCCTTTGACTTCATCTGGAGCATCGTCTCCCGTTGCTGCTGCAGCCATGTGGCAGACACCGTCTAATGTTTCGATCCCTACCCTTCAGCTTCCCAAAAGCAGATTGAAGACTGGAATGACCGCTAGAGATATTAATTCAGATATTGCAATGCTTAGGGTTGAAACTCAGCGGCGAAAGCAGCAACTACTGATGGATGAGATGTCCGGTCTTTCCTCTCCTTCCAACTGGAATCATTCCATGCCTAACAGTCCATCTTTTCCGGTTTCTTCAACCAACCATACGACCGGGGAACTAAATAGGTTTTCGGGGGTGAATCCTACAAACCTTGAAGACATTTTCGGGTCTCTTGATCCATCAATGTTGCATAAATTCCACAGAATTTCACTTGATGCTGCAGGAGCAGCAGGATCTCAGTTACAATCTCCAACTGGAATCCAAATGCGTCCGAATATGAATCAGCATCTGCAACAAAACTATTCTTCAGGCCATTCCACTTCTAGTGTGATTGGATCGCCGACCTATAGGTTTGATCCATCTGGAGAGTTATCCGCGTCGGCTTTGAATGCAAGAGCTGCTGCATTTTCAAAACGGAGCCAGAGCTTTATCGAGCGCAGTGTCACAAACCGTCATTCTGAGCTTCATTCTCCTGCTAAGCCTTATGCTTTTTCTAACTGGGGCTCACCCGATGGAAATTTGGATTGGACTTCACACGGAGAAGAACTGAATAAGCTGAGGAAATCATCTTCTTTTGGATTTCGAACCACCAGTACTCCTTTAACTCCAGCTGCAGCTAGGGCACAGGAAAATGACTATGAACCAGATGTGTCTTGGGTTAATTCACTTGTAAAGGATGCTACGCCGCAAGAATCTCATCAGTTTAGCGTTGAAGATCAGAAAAGGAAACTGCAGCGCCATCTTAACAATGGAACAGATTCGATTCCGGCTTGGTTGGAGCAATTGTACATGGATCAGGAGCAAATAGTGCAGTGA

Protein sequence

>Msa0734280

MCSDSKKKTCQKDLIMGCEYVNGNKEGQYHEVSYLLEFSAADDVVGLKNAIENEGCDVDGVGLWYGRKVGSNKLGYEERTPLMVAAMYGSLDVSAYILGTGRVDVNRSSGSDGATALHCAVVGGSAASPEIIKILLDASADASAVDANGNRPVDLIVSLANSIFNPRKRMLQALLDGTDGADQTCLLFPETIDDIDEYQRQDVNTPRVSKDYPVDVSLPDIKNGIYSTDEFRMYTFKVKPCSRAYSHDWTECPFVHPGENARRRDPRKYHYSCVPCPEFRKGSCSKGDSCDYAHGIFECWLHPAQYKTRLCKDEGSCMRRVCFFAHKVEELRPLYASTGSAIPSPRSYYSTASTLEMGSISPMSLGSPSVLIPPSSTPPLTSSGASSPVAAAAMWQTPSNVSIPTLQLPKSRLKTGMTARDINSDIAMLRVETQRRKQQLLMDEMSGLSSPSNWNHSMPNSPSFPVSSTNHTTGELNRFSGVNPTNLEDIFGSLDPSMLHKFHRISLDAAGAAGSQLQSPTGIQMRPNMNQHLQQNYSSGHSTSSVIGSPTYRFDPSGELSASALNARAAAFSKRSQSFIERSVTNRHSELHSPAKPYAFSNWGSPDGNLDWTSHGEELNKLRKSSSFGFRTTSTPLTPAAARAQENDYEPDVSWVNSLVKDATPQESHQFSVEDQKRKLQRHLNNGTDSIPAWLEQLYMDQEQIVQ*