AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0778430


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0778430 MtrunA17_Chr5g0434401 98.039 459 9 0 1 459 1 459 0.0 926
Msa0778430 MtrunA17_Chr2g0302261 31.852 135 75 3 88 207 78 210 5.31e-13 70.5
Msa0778430 MtrunA17_Chr3g0132251 31.852 135 75 3 88 207 78 210 6.35e-13 70.5
Msa0778430 MtrunA17_Chr5g0444711 29.197 137 96 1 85 221 80 215 1.92e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0778430 AT5G37530.2 75.546 458 104 3 2 457 3 454 0.0 664
Msa0778430 AT5G37530.1 75.381 459 104 3 2 457 3 455 0.0 663
Msa0778430 AT1G05350.1 32.353 136 74 4 88 207 75 208 2.50e-12 68.9
Msa0778430 AT5G55130.1 31.387 137 93 1 85 221 81 216 2.40e-11 65.9

Find 117 sgRNAs with CRISPR-Local

Find 538 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTTAAACTGCTTCCATTTA+AGG 0.095386 5_2:+58888410 Msa0778430:CDS
GGCACCATCCCTGCAATATT+TGG 0.184351 5_2:+58888761 Msa0778430:CDS
TCTCCACTTGGACCCTTAAA+TGG 0.191266 5_2:-58888423 None:intergenic
TGTGGTTGTGTAATGGGTTT+CGG 0.226540 5_2:-58882267 None:intergenic
GTGGTTGTGTAATGGGTTTC+GGG 0.243514 5_2:-58882266 None:intergenic
GCATTTCTCATCAATATTTC+CGG 0.277755 5_2:+58886041 Msa0778430:CDS
GTGGTTTGTGGTTGTGTAAT+GGG 0.320895 5_2:-58882273 None:intergenic
GTTAAACTGCTTCCATTTAA+GGG 0.329864 5_2:+58888411 Msa0778430:CDS
CAAAAGAATCAAATTTGAAA+TGG 0.339139 5_2:-58890743 None:intergenic
AGTATATTGCTAAAGAATTA+TGG 0.342122 5_2:+58889943 Msa0778430:CDS
GCTTCTATGCTCTTGAGATC+AGG 0.342703 5_2:+58884925 Msa0778430:CDS
GTCATTGGTCTTGGAGGGGT+TGG 0.361060 5_2:+58884892 Msa0778430:CDS
ATGTCTCCTCATGCTCAATA+AGG 0.363849 5_2:-58888889 None:intergenic
GGTGGTTTGTGGTTGTGTAA+TGG 0.365544 5_2:-58882274 None:intergenic
TCTTCTTGTGGACTTTGATC+AGG 0.369024 5_2:+58884960 Msa0778430:CDS
AAATGGAAGCAGTTTAACTT+TGG 0.369531 5_2:-58888406 None:intergenic
GGAAAACCCTTCAGACTATC+AGG 0.373502 5_2:+58888449 Msa0778430:CDS
TTGAAGGTTCTATCTGCCAC+TGG 0.383229 5_2:+58886355 Msa0778430:CDS
AAACAAGCTGAAAATGACTT+TGG 0.385221 5_2:+58891636 Msa0778430:CDS
AATGGAAGCAGTTTAACTTT+GGG 0.385825 5_2:-58888405 None:intergenic
GTCCGTATCATACCTGTTCT+AGG 0.395244 5_2:+58888740 Msa0778430:CDS
TTGTGGTCATTGGTCTTGGA+GGG 0.395430 5_2:+58884887 Msa0778430:CDS
GTTCTATCTGCCACTGGGGC+TGG 0.398346 5_2:+58886361 Msa0778430:CDS
CATGGAGCGAAGCAAATGTT+TGG 0.400140 5_2:+58882366 Msa0778430:exon
TAAGGCGTTGATGAAGAATA+TGG 0.400338 5_2:-58888871 None:intergenic
CTCAAAAGCTCAGTGCCTTA+AGG 0.405270 5_2:+58886017 Msa0778430:CDS
GCCTGAGAGAATTTCTTCTT+CGG 0.413115 5_2:-58886106 None:intergenic
GCGAAGCAAATGTTTGGTTT+TGG 0.413385 5_2:+58882372 Msa0778430:CDS
CTGTCTTGTTCGGTGGTTTG+TGG 0.420862 5_2:-58882285 None:intergenic
TATGTTGTGGTCATTGGTCT+TGG 0.420905 5_2:+58884883 Msa0778430:CDS
TGCAGGTAAGACACCGTCTA+AGG 0.423897 5_2:+58888331 Msa0778430:intron
ATGACTTGTCCAAATATTGC+AGG 0.433359 5_2:-58888770 None:intergenic
ACATCGGAGGCTGTCTTGTT+CGG 0.434219 5_2:-58882295 None:intergenic
GCATCATATGTTGTGGTCAT+TGG 0.440912 5_2:+58884877 Msa0778430:CDS
TGCAACACTACACCACCAAT+TGG 0.443962 5_2:-58891687 None:intergenic
AATGAAACTGCTGAATTCAA+TGG 0.447417 5_2:+58882576 Msa0778430:CDS
ATCAAATTTGAAATGGATGC+CGG 0.447657 5_2:-58890736 None:intergenic
ATGTGTACGTAGGGGCTTGA+AGG 0.448817 5_2:+58886339 Msa0778430:CDS
ACAAGACAGCCTCCGATGTC+AGG 0.453766 5_2:+58882299 Msa0778430:five_prime_UTR
GCAGGGATGGTGCCTAGAAC+AGG 0.459263 5_2:-58888752 None:intergenic
TTGATGAGAAATGCTCCTTA+AGG 0.462220 5_2:-58886032 None:intergenic
GAGCTTGAGAAGAAAGAAAG+TGG 0.468799 5_2:-58882425 None:intergenic
TGTAGTGTTGCATGTCTAAT+AGG 0.468884 5_2:+58891698 Msa0778430:three_prime_UTR
AGAACTATAACTATTCCAAT+TGG 0.472436 5_2:+58891672 Msa0778430:three_prime_UTR
AGGAAAGATCATGGCATTGA+TGG 0.475499 5_2:+58888351 Msa0778430:CDS
GTTGTGGTCATTGGTCTTGG+AGG 0.475695 5_2:+58884886 Msa0778430:CDS
TGGAAGAAGTGCCAGGGAGC+AGG 0.480348 5_2:+58889968 Msa0778430:CDS
GGTAGCACAGCAGTCGGGTC+AGG 0.486818 5_2:-58882245 None:intergenic
ATACAGTCGAGGACAAAGTC+GGG 0.487096 5_2:-58886132 None:intergenic
CTTCTATGCTCTTGAGATCA+GGG 0.488337 5_2:+58884926 Msa0778430:CDS
ATTGGATGATGTAAAAGAAA+AGG 0.490721 5_2:+58891578 Msa0778430:CDS
GATTGGAAAGCTTCTTCTTG+TGG 0.491466 5_2:+58884948 Msa0778430:CDS
TCTTGCTGCATGTGTACGTA+GGG 0.492701 5_2:+58886330 Msa0778430:CDS
TGCAATATTTGGACAAGTCA+TGG 0.494500 5_2:+58888772 Msa0778430:CDS
TGAAGGTTCTATCTGCCACT+GGG 0.495632 5_2:+58886356 Msa0778430:CDS
TAGGTGGGACAGTACGAAAC+CGG 0.500120 5_2:+58890717 Msa0778430:intron
TCCATATCAAAATTTACTAC+AGG 0.506608 5_2:-58888842 None:intergenic
TGCCATGATCTTTCCTTAGA+CGG 0.513121 5_2:-58888344 None:intergenic
GTTGACAGATGCACTATAGC+TGG 0.514010 5_2:+58884046 Msa0778430:CDS
CGGAACTTCCATGCATGTGC+AGG 0.515237 5_2:+58888916 Msa0778430:CDS
TATGGCATGGAAGAAGTGCC+AGG 0.515687 5_2:+58889961 Msa0778430:CDS
TGGCTTTGAATCACAACAGA+AGG 0.521703 5_2:+58884849 Msa0778430:CDS
TTGTTTCTGAACAGCTGACT+AGG 0.524566 5_2:+58884116 Msa0778430:CDS
ATTTCCGGAGTGTCAAATAG+AGG 0.529315 5_2:+58886056 Msa0778430:CDS
ATGCTCTTGAGATCAGGGAT+TGG 0.538002 5_2:+58884931 Msa0778430:CDS
GAGCATGAGGAGACATTGTA+CGG 0.540313 5_2:+58888896 Msa0778430:CDS
TAGTTATACCTGCACATGCA+TGG 0.541186 5_2:-58888924 None:intergenic
TGTGGTCATTGGTCTTGGAG+GGG 0.541816 5_2:+58884888 Msa0778430:CDS
GGGTCAGGTCATACAGCAGT+CGG 0.545772 5_2:-58882230 None:intergenic
ACCGAAGAAGAAATTCTCTC+AGG 0.550201 5_2:+58886105 Msa0778430:CDS
ACTATAACTATTCCAATTGG+TGG 0.550298 5_2:+58891675 Msa0778430:three_prime_UTR
TTTGCCTCTATTTGACACTC+CGG 0.555313 5_2:-58886060 None:intergenic
TCGGAGGCTGTCTTGTTCGG+TGG 0.558829 5_2:-58882292 None:intergenic
AGGTTGCAAAAGACGTTGGA+CGG 0.563486 5_2:+58889988 Msa0778430:CDS
TGCTAAATCCGTCAAAACAT+AGG 0.565829 5_2:-58888798 None:intergenic
TAAGGGTCCAAGTGGAGAAG+AGG 0.568996 5_2:+58888428 Msa0778430:CDS
AACATTACCGATCGAGACAA+TGG 0.570390 5_2:-58886442 None:intergenic
GGTTGCAAAAGACGTTGGAC+GGG 0.575361 5_2:+58889989 Msa0778430:CDS
TGAGCATGAGTCACGGACAT+TGG 0.578240 5_2:+58891560 Msa0778430:CDS
GTTTCGGGTAGCACAGCAGT+CGG 0.578359 5_2:-58882251 None:intergenic
AGCTGGAAAGAAGAGTGGTA+AGG 0.578803 5_2:+58884063 Msa0778430:CDS
GGTCAGGTCATACAGCAGTC+GGG 0.581928 5_2:-58882229 None:intergenic
ATCACTCTACTGTAAAACTC+TGG 0.585148 5_2:-58891603 None:intergenic
CACCGTCTAAGGAAAGATCA+TGG 0.587229 5_2:+58888342 Msa0778430:CDS
TCAACGCCTTATTGAGCATG+AGG 0.591670 5_2:+58888883 Msa0778430:CDS
TGCCTAGAACAGGTATGATA+CGG 0.591720 5_2:-58888742 None:intergenic
TCAGCGATGCGTATTCTCGT+TGG 0.592786 5_2:-58886397 None:intergenic
GAAATCACCTGATAGTCTGA+AGG 0.592855 5_2:-58888456 None:intergenic
TTCTTGCTGCATGTGTACGT+AGG 0.597754 5_2:+58886329 Msa0778430:CDS
TAACTCTGTTGGCCTGACAT+CGG 0.599955 5_2:-58882311 None:intergenic
AATACAGTCGAGGACAAAGT+CGG 0.603469 5_2:-58886133 None:intergenic
TATTGATAACATTGATACAA+AGG 0.607266 5_2:+58886152 Msa0778430:CDS
CTCTGTTGGCCTGACATCGG+AGG 0.611110 5_2:-58882308 None:intergenic
TAACGATCCATTGTCTCGAT+CGG 0.611640 5_2:+58886435 Msa0778430:CDS
ATTGCTAAAGAATTATGGCA+TGG 0.615056 5_2:+58889948 Msa0778430:CDS
ATGATACGGACCCTAAAACC+TGG 0.616259 5_2:-58888728 None:intergenic
GTTGCGACAAGAGCAGATGT+TGG 0.616352 5_2:+58885991 Msa0778430:CDS
AAATCACCTGATAGTCTGAA+GGG 0.617610 5_2:-58888455 None:intergenic
TTGTCCAAATATTGCAGGGA+TGG 0.619227 5_2:-58888765 None:intergenic
AAAGATCATGGCATTGATGG+TGG 0.626212 5_2:+58888354 Msa0778430:CDS
GAGCAGGTTGCAAAAGACGT+TGG 0.631332 5_2:+58889984 Msa0778430:CDS
CTTCCATTTAAGGGTCCAAG+TGG 0.631821 5_2:+58888420 Msa0778430:CDS
TGACTTGTCCAAATATTGCA+GGG 0.641613 5_2:-58888769 None:intergenic
AAGACGTTGGACGGGCAATG+TGG 0.651648 5_2:+58889997 Msa0778430:CDS
ATGGCATGGAAGAAGTGCCA+GGG 0.652276 5_2:+58889962 Msa0778430:CDS
AGCTCTAGCACCAGCCCCAG+TGG 0.652736 5_2:-58886371 None:intergenic
AGGTGGATGAGCATGAGTCA+CGG 0.655267 5_2:+58891553 Msa0778430:intron
ACTATAGCTGGAAAGAAGAG+TGG 0.663449 5_2:+58884058 Msa0778430:CDS
TTAATGAATTGATGCTTGTG+AGG 0.664450 5_2:+58890027 Msa0778430:CDS
CTTGCTGCATGTGTACGTAG+GGG 0.674097 5_2:+58886331 Msa0778430:CDS
CAATGTTATCAATACAGTCG+AGG 0.674794 5_2:-58886143 None:intergenic
TACAGTCGAGGACAAAGTCG+GGG 0.678561 5_2:-58886131 None:intergenic
TTTCTAAAGAAAACACAACA+GGG 0.688114 5_2:-58888380 None:intergenic
AGTCGAGGACAAAGTCGGGG+TGG 0.709352 5_2:-58886128 None:intergenic
GAAGGTTCTATCTGCCACTG+GGG 0.721240 5_2:+58886357 Msa0778430:CDS
TTTGCAGAAGAGGTTTACGG+CGG 0.727491 5_2:+58882541 Msa0778430:intron
GGTGAGTGCATCATATGTTG+TGG 0.730215 5_2:+58884870 Msa0778430:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACAATTATTAAAAGTAATAA+TGG - chr5_2:58883381-58883400 None:intergenic 10.0%
!!! GACTTTTTTTTTTTTTTTTT+TGG + chr5_2:58883893-58883912 Msa0778430:intron 10.0%
!! TATTTATTTATTAAATGAGA+AGG + chr5_2:58885939-58885958 Msa0778430:intron 10.0%
!!! TAGTTAATCTAAATTTTAAA+TGG - chr5_2:58887991-58888010 None:intergenic 10.0%
!!! ATTTAAAATTTAGATTAACT+AGG + chr5_2:58887990-58888009 Msa0778430:intron 10.0%
!!! TTTGTTTCTATTTTTTTTAT+AGG + chr5_2:58889902-58889921 Msa0778430:intron 10.0%
!!! AAATTAGGAAAAATTTATTT+TGG - chr5_2:58891404-58891423 None:intergenic 10.0%
!!! TAAATTTTTCCTAATTTTAT+AGG + chr5_2:58891407-58891426 Msa0778430:intron 10.0%
!!! AAATTTTTCCTAATTTTATA+GGG + chr5_2:58891408-58891427 Msa0778430:intron 10.0%
!! GTAAATATATTATCTATTTA+TGG - chr5_2:58891496-58891515 None:intergenic 10.0%
!!! ATTATAACTGTTAAATTTTT+TGG + chr5_2:58891744-58891763 Msa0778430:three_prime_UTR 10.0%
!! TTTACAAAATATCATCTTTA+GGG - chr5_2:58883314-58883333 None:intergenic 15.0%
!!! TGTGTATATTAATTGATTTA+CGG - chr5_2:58884308-58884327 None:intergenic 15.0%
!!! CTGTTAACTATTTATATTTT+GGG + chr5_2:58884727-58884746 Msa0778430:intron 15.0%
!! GTAAAATAATTGATAAGATA+AGG - chr5_2:58885142-58885161 None:intergenic 15.0%
!!! AATAAAGTAGTTTTAACTTT+TGG + chr5_2:58885861-58885880 Msa0778430:intron 15.0%
!!! TATGGTTTTTGTTAAAAATT+AGG - chr5_2:58889583-58889602 None:intergenic 15.0%
!!! TATTGCTCTAAAATAAAATT+TGG + chr5_2:58890941-58890960 Msa0778430:intron 15.0%
!! AAGGATAGTTTATTTATTAA+AGG + chr5_2:58891163-58891182 Msa0778430:intron 15.0%
!! AGGATAGTTTATTTATTAAA+GGG + chr5_2:58891164-58891183 Msa0778430:intron 15.0%
!!! AAATTATGAGAAATGTTTTT+TGG + chr5_2:58891206-58891225 Msa0778430:intron 15.0%
!!! ACACAATTTTTGTATTTTTT+AGG - chr5_2:58891315-58891334 None:intergenic 15.0%
!! ACAAATAGATATTTATTATC+TGG - chr5_2:58891523-58891542 None:intergenic 15.0%
!! AGTAAAAAAGACAAGATTAA+AGG - chr5_2:58882485-58882504 None:intergenic 20.0%
!!! TTTTTTTTTTTTTGCAGAAG+AGG + chr5_2:58882531-58882550 Msa0778430:intron 20.0%
!! TGCTATAATACTTAATTAAG+TGG - chr5_2:58882699-58882718 None:intergenic 20.0%
!!! AATTTTGTAACTACAAATGA+AGG + chr5_2:58883072-58883091 Msa0778430:intron 20.0%
!!! TCATTTTCCATTTTCATTTA+TGG - chr5_2:58883260-58883279 None:intergenic 20.0%
!! GTTTACAAAATATCATCTTT+AGG - chr5_2:58883315-58883334 None:intergenic 20.0%
!! TTTGTAAACTGTAAATGTTA+AGG + chr5_2:58883326-58883345 Msa0778430:intron 20.0%
!!! ACTTTTAATAATTGTTGCAT+TGG + chr5_2:58883386-58883405 Msa0778430:intron 20.0%
!! TGAATAAATATTTGAAAGCA+GGG + chr5_2:58883455-58883474 Msa0778430:intron 20.0%
!! TATCAATTCGGATTAAAAAA+GGG - chr5_2:58883661-58883680 None:intergenic 20.0%
!! TTATCAATTCGGATTAAAAA+AGG - chr5_2:58883662-58883681 None:intergenic 20.0%
!! CAGAAATCTTATTAACTTTA+TGG - chr5_2:58884007-58884026 None:intergenic 20.0%
!! AGAGAAAATGTCAAAATAAT+TGG - chr5_2:58884157-58884176 None:intergenic 20.0%
!!! GTGTATATTAATTGATTTAC+GGG - chr5_2:58884307-58884326 None:intergenic 20.0%
!!! TTTCATAAGTTTTCTATTTC+AGG + chr5_2:58884508-58884527 Msa0778430:intron 20.0%
!!! TTCATAAGTTTTCTATTTCA+GGG + chr5_2:58884509-58884528 Msa0778430:intron 20.0%
!!! GCTTTTTTATTTGAGTTAAA+GGG + chr5_2:58884531-58884550 Msa0778430:intron 20.0%
!!! CTTTTTTATTTGAGTTAAAG+GGG + chr5_2:58884532-58884551 Msa0778430:intron 20.0%
!!! TTTTTTATTTGAGTTAAAGG+GGG + chr5_2:58884533-58884552 Msa0778430:intron 20.0%
!! CCAAAATATAAATAGTTAAC+AGG - chr5_2:58884729-58884748 None:intergenic 20.0%
!!! CCTGTTAACTATTTATATTT+TGG + chr5_2:58884726-58884745 Msa0778430:intron 20.0%
!!! TTAACTATTTATATTTTGGG+TGG + chr5_2:58884730-58884749 Msa0778430:intron 20.0%
!! AAAGATTAAACATTATCAAG+AGG - chr5_2:58885006-58885025 None:intergenic 20.0%
!!! AATCTTTCTTCTTTTATTCT+TGG + chr5_2:58885019-58885038 Msa0778430:intron 20.0%
!!! TTGTCGTTTTCAAATTTTAA+AGG + chr5_2:58885081-58885100 Msa0778430:intron 20.0%
!! TCATATCACTTAATGTTATT+TGG + chr5_2:58885390-58885409 Msa0778430:intron 20.0%
!! TAAAATAATCTTCTGATAGT+CGG - chr5_2:58885495-58885514 None:intergenic 20.0%
!!! ATATTGACAACAAGTTTTTT+AGG - chr5_2:58885806-58885825 None:intergenic 20.0%
!!! TATTGATAACATTGATACAA+AGG + chr5_2:58886152-58886171 Msa0778430:CDS 20.0%
!!! CTTTTCCATACATAATATTA+CGG - chr5_2:58886595-58886614 None:intergenic 20.0%
!! GGGAATATTCTATTATAAAA+GGG - chr5_2:58886762-58886781 None:intergenic 20.0%
!! AGGGAATATTCTATTATAAA+AGG - chr5_2:58886763-58886782 None:intergenic 20.0%
!! AATAAATGTGCTCTATTATT+CGG + chr5_2:58886872-58886891 Msa0778430:intron 20.0%
!! TAGACTATGATAAATGATAA+AGG + chr5_2:58887098-58887117 Msa0778430:intron 20.0%
!! TCAAGAAGAGATAATTTATT+AGG - chr5_2:58887487-58887506 None:intergenic 20.0%
!! AGAAAACAATAAATACCTAA+GGG - chr5_2:58887845-58887864 None:intergenic 20.0%
!! TAGAAAACAATAAATACCTA+AGG - chr5_2:58887846-58887865 None:intergenic 20.0%
!! TCTTTGCAATAAATACTTAA+GGG - chr5_2:58887954-58887973 None:intergenic 20.0%
!!! AATTTTGTTTGTGATAGAAA+TGG - chr5_2:58888090-58888109 None:intergenic 20.0%
!!! GGTATAGCATTTTAAAATAA+TGG + chr5_2:58888190-58888209 Msa0778430:intron 20.0%
!!! ATAGCATTTTAAAATAATGG+TGG + chr5_2:58888193-58888212 Msa0778430:intron 20.0%
!! TTCTTAATTGTATAAAGCAA+GGG - chr5_2:58889065-58889084 None:intergenic 20.0%
!!! CTAATTTTTGCATAATTAGA+AGG + chr5_2:58889177-58889196 Msa0778430:intron 20.0%
!! TTGTTAAAAATTAGGATAGA+GGG - chr5_2:58889575-58889594 None:intergenic 20.0%
!! TTTGTTAAAAATTAGGATAG+AGG - chr5_2:58889576-58889595 None:intergenic 20.0%
!!! GTTCACTTAATTTTGTAAAT+CGG + chr5_2:58889619-58889638 Msa0778430:intron 20.0%
!!! TTCACTTAATTTTGTAAATC+GGG + chr5_2:58889620-58889639 Msa0778430:intron 20.0%
!! AGTATATTGCTAAAGAATTA+TGG + chr5_2:58889943-58889962 Msa0778430:CDS 20.0%
!! ATAAAAAAAACAACTTAAGG+AGG - chr5_2:58890333-58890352 None:intergenic 20.0%
!!! TCCTTAAGTTGTTTTTTTTA+TGG + chr5_2:58890332-58890351 Msa0778430:intron 20.0%
!! ACCATAAAAAAAACAACTTA+AGG - chr5_2:58890336-58890355 None:intergenic 20.0%
!!! TAAAATTTGAGACTATTTTG+TGG + chr5_2:58890459-58890478 Msa0778430:intron 20.0%
!!! AAAATTTGAGACTATTTTGT+GGG + chr5_2:58890460-58890479 Msa0778430:intron 20.0%
!!! TTTTCTCTTCTTTTTTGTTT+AGG + chr5_2:58890698-58890717 Msa0778430:intron 20.0%
!! CAAAAGAATCAAATTTGAAA+TGG - chr5_2:58890746-58890765 None:intergenic 20.0%
!! TTAAATAGAAAAACTACTTG+TGG + chr5_2:58890870-58890889 Msa0778430:intron 20.0%
!! TAAATAGAAAAACTACTTGT+GGG + chr5_2:58890871-58890890 Msa0778430:intron 20.0%
!!! ATCTGATTAGTTCTAAATAT+AGG - chr5_2:58890902-58890921 None:intergenic 20.0%
!!! TTTTTTGTAGAGTATAAACA+AGG - chr5_2:58891275-58891294 None:intergenic 20.0%
!! ATATTATCTATTTATGGTAG+TGG - chr5_2:58891490-58891509 None:intergenic 20.0%
! ACCTTAAAAACAAACAAACA+TGG + chr5_2:58882348-58882367 Msa0778430:exon 25.0%
!!! TCCATGTTTGTTTGTTTTTA+AGG - chr5_2:58882352-58882371 None:intergenic 25.0%
!!! AAGTTAAGCATTGACAATTA+GGG - chr5_2:58882951-58882970 None:intergenic 25.0%
!!! TAAGTTAAGCATTGACAATT+AGG - chr5_2:58882952-58882971 None:intergenic 25.0%
! AAAACATCAAGGAAAATGAA+AGG - chr5_2:58883008-58883027 None:intergenic 25.0%
! TAGGAAACAAAGTTAAAATG+AGG + chr5_2:58883047-58883066 Msa0778430:intron 25.0%
! GACAAAACCATAAATGAAAA+TGG + chr5_2:58883250-58883269 Msa0778430:intron 25.0%
! GTAAATGTTAAGGTTCTATT+TGG + chr5_2:58883336-58883355 Msa0778430:intron 25.0%
!! GTTTCAATCTTTGAAAGATT+TGG + chr5_2:58883408-58883427 Msa0778430:intron 25.0%
! CTGAATAAATATTTGAAAGC+AGG + chr5_2:58883454-58883473 Msa0778430:intron 25.0%
! AAATAAAAAACTGAGTGCAT+TGG + chr5_2:58883740-58883759 Msa0778430:intron 25.0%
! AAATACCCTATGAAGAATAA+AGG - chr5_2:58884279-58884298 None:intergenic 25.0%
! TTAGAGATAATTATATAGCC+AGG + chr5_2:58884338-58884357 Msa0778430:intron 25.0%
!!! GGCTTTTTTATTTGAGTTAA+AGG + chr5_2:58884530-58884549 Msa0778430:intron 25.0%
!! TTAGTGTAGATCTATTTTAC+AGG + chr5_2:58884564-58884583 Msa0778430:intron 25.0%
!! TAGTGTAGATCTATTTTACA+GGG + chr5_2:58884565-58884584 Msa0778430:intron 25.0%
! TCAAAATGAACTTATGAAAG+TGG + chr5_2:58884633-58884652 Msa0778430:intron 25.0%
! CAAAATGAACTTATGAAAGT+GGG + chr5_2:58884634-58884653 Msa0778430:intron 25.0%
! AAGAAAAGACAGATATATCA+AGG - chr5_2:58884762-58884781 None:intergenic 25.0%
!! TGATATATCTGTCTTTTCTT+TGG + chr5_2:58884762-58884781 Msa0778430:intron 25.0%
!! TTTCTTCTTTTATTCTTGGA+TGG + chr5_2:58885023-58885042 Msa0778430:intron 25.0%
!!! TGTTAATCAAAGCTATTTCT+TGG + chr5_2:58885239-58885258 Msa0778430:intron 25.0%
!!! AATTTTTTTCTTGCAATCAG+TGG - chr5_2:58885348-58885367 None:intergenic 25.0%
! TCTGTGAAATATTTAAGTGT+TGG + chr5_2:58885586-58885605 Msa0778430:intron 25.0%
!! AACTGTTAGTTATGTTTCTA+TGG + chr5_2:58885683-58885702 Msa0778430:intron 25.0%
! TTATTACTTACTGTAATGCA+TGG + chr5_2:58885756-58885775 Msa0778430:intron 25.0%
! AAATAAGTACTTACAGTGTA+TGG - chr5_2:58885924-58885943 None:intergenic 25.0%
! AAATAAGGAGTTGAATTTAG+AGG - chr5_2:58886181-58886200 None:intergenic 25.0%
! CTTGAGAATGTAATCAAATA+AGG - chr5_2:58886196-58886215 None:intergenic 25.0%
! CTTGATATGTTATGTGTAAT+AGG + chr5_2:58886300-58886319 Msa0778430:intron 25.0%
! TACAATAAAAGAGTCATATG+AGG - chr5_2:58886469-58886488 None:intergenic 25.0%
!! TTAGGATGTACTTTTATACA+AGG - chr5_2:58886528-58886547 None:intergenic 25.0%
!! TATCAGATAATCAGAGTTTT+AGG - chr5_2:58886546-58886565 None:intergenic 25.0%
! CAAAACCGTAATATTATGTA+TGG + chr5_2:58886587-58886606 Msa0778430:intron 25.0%
! CGTAATATTATGTATGGAAA+AGG + chr5_2:58886593-58886612 Msa0778430:intron 25.0%
! TAGAATATTCCCTAAAATCA+AGG + chr5_2:58886770-58886789 Msa0778430:intron 25.0%
! TAATAGAGCACATTTATTGA+AGG - chr5_2:58886870-58886889 None:intergenic 25.0%
!! CGTAATAAGTTTGAAATCAA+TGG - chr5_2:58886968-58886987 None:intergenic 25.0%
! ATGATAAATGATAAAGGTTC+TGG + chr5_2:58887104-58887123 Msa0778430:intron 25.0%
! ATGAAGATTCAAAAGTCTAT+CGG - chr5_2:58887531-58887550 None:intergenic 25.0%
!! TCTTTTAATCTAACAAGTCA+AGG - chr5_2:58887610-58887629 None:intergenic 25.0%
! ATTAAGCTGTAAGTTAATTG+AGG - chr5_2:58887642-58887661 None:intergenic 25.0%
! AAAACAAAACAGTTCTACAA+AGG - chr5_2:58887880-58887899 None:intergenic 25.0%
! AAAAAATGTTGCATTCAACT+TGG - chr5_2:58887917-58887936 None:intergenic 25.0%
! CTCTTTGCAATAAATACTTA+AGG - chr5_2:58887955-58887974 None:intergenic 25.0%
! TATTTATTGCAAAGAGAGAA+AGG + chr5_2:58887959-58887978 Msa0778430:intron 25.0%
! ATTTATTGCAAAGAGAGAAA+GGG + chr5_2:58887960-58887979 Msa0778430:intron 25.0%
! AATTTAGATTAACTAGGTGA+TGG + chr5_2:58887996-58888015 Msa0778430:intron 25.0%
!!! TTTTGTTTTTTTCTTCCATG+GGG - chr5_2:58888057-58888076 None:intergenic 25.0%
!!! GTTTTGTTTTTTTCTTCCAT+GGG - chr5_2:58888058-58888077 None:intergenic 25.0%
!!! AGTTTTGTTTTTTTCTTCCA+TGG - chr5_2:58888059-58888078 None:intergenic 25.0%
!!! TGCGTTTTTTTTTCATTGAA+GGG + chr5_2:58888129-58888148 Msa0778430:intron 25.0%
! TACTAATAAGAGCAATACTA+AGG - chr5_2:58888270-58888289 None:intergenic 25.0%
!! TTTCTAAAGAAAACACAACA+GGG - chr5_2:58888383-58888402 None:intergenic 25.0%
!!! TTTTCTAAAGAAAACACAAC+AGG - chr5_2:58888384-58888403 None:intergenic 25.0%
!!! ACCTGTAGTAAATTTTGATA+TGG + chr5_2:58888841-58888860 Msa0778430:CDS 25.0%
! TCCATATCAAAATTTACTAC+AGG - chr5_2:58888845-58888864 None:intergenic 25.0%
!!! TTTTAAAAGAACCTCTGAAA+AGG - chr5_2:58888986-58889005 None:intergenic 25.0%
!!! GAGGTTCTTTTAAAAAATTG+AGG + chr5_2:58888991-58889010 Msa0778430:intron 25.0%
! TCTTAATTGTATAAAGCAAG+GGG - chr5_2:58889064-58889083 None:intergenic 25.0%
! GTTCTTAATTGTATAAAGCA+AGG - chr5_2:58889066-58889085 None:intergenic 25.0%
!!! TGAGCTTTTTCATAATATGA+TGG - chr5_2:58890795-58890814 None:intergenic 25.0%
! TTGTACAAAATAGTGAAAGA+GGG + chr5_2:58890983-58891002 Msa0778430:intron 25.0%
!! AGAAGGTTGATTATTAACTT+AGG + chr5_2:58891080-58891099 Msa0778430:intron 25.0%
! TTTATTTATTAAAGGGAGAG+AGG + chr5_2:58891171-58891190 Msa0778430:intron 25.0%
! TTATTTATTAAAGGGAGAGA+GGG + chr5_2:58891172-58891191 Msa0778430:intron 25.0%
! GAGTATAAACAAGGTAAAAA+CGG - chr5_2:58891266-58891285 None:intergenic 25.0%
! TTTAACAAAAATGGTGTGTT+TGG - chr5_2:58891350-58891369 None:intergenic 25.0%
!!! CACACCATTTTTGTTAAATA+TGG + chr5_2:58891352-58891371 Msa0778430:intron 25.0%
! GGTTCCATATTTAACAAAAA+TGG - chr5_2:58891359-58891378 None:intergenic 25.0%
! ACCAACAAGAAAATTTATCT+AGG + chr5_2:58891376-58891395 Msa0778430:intron 25.0%
! CCAACAAGAAAATTTATCTA+GGG + chr5_2:58891377-58891396 Msa0778430:intron 25.0%
!! TTTTCCTAATTTTATAGGGA+TGG + chr5_2:58891412-58891431 Msa0778430:intron 25.0%
!! TTTTCCATCCCTATAAAATT+AGG - chr5_2:58891419-58891438 None:intergenic 25.0%
! ATTGGATGATGTAAAAGAAA+AGG + chr5_2:58891578-58891597 Msa0778430:CDS 25.0%
! AGAACTATAACTATTCCAAT+TGG + chr5_2:58891672-58891691 Msa0778430:three_prime_UTR 25.0%
! TGTTTTTCTCTTAACTCTGT+TGG - chr5_2:58882325-58882344 None:intergenic 30.0%
!!! TTTTTTGCAGAAGAGGTTTA+CGG + chr5_2:58882538-58882557 Msa0778430:intron 30.0%
AATGAAACTGCTGAATTCAA+TGG + chr5_2:58882576-58882595 Msa0778430:CDS 30.0%
TGGTTTATCATAACAGATCA+TGG - chr5_2:58882679-58882698 None:intergenic 30.0%
TAAACACTTATGAGACTACT+CGG - chr5_2:58882890-58882909 None:intergenic 30.0%
TTCCTATTTCGAATCTTTGA+AGG - chr5_2:58883033-58883052 None:intergenic 30.0%
!! TACAAGTTTGTTTCTACCAT+CGG - chr5_2:58883197-58883216 None:intergenic 30.0%
!!! TGGACAAGAATTGTTTTTGT+TGG + chr5_2:58883428-58883447 Msa0778430:intron 30.0%
TCTACGGTATTACAAATAGT+AGG - chr5_2:58883572-58883591 None:intergenic 30.0%
TTACAATGACAACACCAAAA+GGG - chr5_2:58883694-58883713 None:intergenic 30.0%
ATTACAATGACAACACCAAA+AGG - chr5_2:58883695-58883714 None:intergenic 30.0%
AAATTTAGTACATCTAGTGC+AGG + chr5_2:58883773-58883792 Msa0778430:intron 30.0%
AGTGCAGGTATTTGTATTAA+CGG + chr5_2:58883788-58883807 Msa0778430:intron 30.0%
GTATTAACGGTTAGTATGTT+AGG + chr5_2:58883801-58883820 Msa0778430:intron 30.0%
!! TAGTATGTTAGGTGTTGAAA+TGG + chr5_2:58883812-58883831 Msa0778430:intron 30.0%
TGAATGAGTCTACAGAAAAA+TGG - chr5_2:58883860-58883879 None:intergenic 30.0%
AGCACGAAAACATTTACATT+CGG - chr5_2:58884193-58884212 None:intergenic 30.0%
!! AGCTGTTTTACCAAATGATT+CGG - chr5_2:58884217-58884236 None:intergenic 30.0%
!!! ACATCGATTCAATTTTACTG+TGG + chr5_2:58884467-58884486 Msa0778430:intron 30.0%
!!! CATCGATTCAATTTTACTGT+GGG + chr5_2:58884468-58884487 Msa0778430:intron 30.0%
TTTAGACTGACATTCAATGA+TGG - chr5_2:58884681-58884700 None:intergenic 30.0%
! ATTGAATGTCAGTCTAAAAC+TGG + chr5_2:58884683-58884702 Msa0778430:intron 30.0%
!!! ACTAGGAACATTCAGTTTTT+TGG + chr5_2:58884829-58884848 Msa0778430:intron 30.0%
AATTTGAAAACGACAAAACC+AGG - chr5_2:58885077-58885096 None:intergenic 30.0%
ATGAAGAGAGAGAGAATAAA+TGG + chr5_2:58885172-58885191 Msa0778430:intron 30.0%
TGAAGAGAGAGAGAATAAAT+GGG + chr5_2:58885173-58885192 Msa0778430:intron 30.0%
AACCTTAAAGACATGTACAT+AGG + chr5_2:58885274-58885293 Msa0778430:intron 30.0%
TTCCTATGTACATGTCTTTA+AGG - chr5_2:58885279-58885298 None:intergenic 30.0%
!!! TAAACATTTTGGCTCTCTAA+AGG + chr5_2:58885308-58885327 Msa0778430:intron 30.0%
TTCTATGTAATAGCGTCATT+GGG - chr5_2:58885431-58885450 None:intergenic 30.0%
! ACGCTATTACATAGAAGTTT+TGG + chr5_2:58885435-58885454 Msa0778430:intron 30.0%
GCTTAAGAAAAGCAACAAAT+TGG + chr5_2:58885644-58885663 Msa0778430:intron 30.0%
!! CTATGGCTTTTTAACTAACA+TGG + chr5_2:58885700-58885719 Msa0778430:intron 30.0%
AGCAGAATTTCATAATGCAA+AGG + chr5_2:58885831-58885850 Msa0778430:intron 30.0%
GCATTTCTCATCAATATTTC+CGG + chr5_2:58886041-58886060 Msa0778430:CDS 30.0%
!! GAGAGTTATTGTTGATGATA+AGG - chr5_2:58886234-58886253 None:intergenic 30.0%
ATAACTCTCACTGAAATGTA+TGG + chr5_2:58886245-58886264 Msa0778430:intron 30.0%
GATATGTTATGTGTAATAGG+TGG + chr5_2:58886303-58886322 Msa0778430:intron 30.0%
TTATAAAAGGGAGTAAGTCA+TGG - chr5_2:58886750-58886769 None:intergenic 30.0%
TATTCCCTAAAATCAAGGAA+AGG + chr5_2:58886775-58886794 Msa0778430:intron 30.0%
ATTCCCTAAAATCAAGGAAA+GGG + chr5_2:58886776-58886795 Msa0778430:intron 30.0%
! CTGATAGATTATAGAAGCAT+AGG - chr5_2:58886817-58886836 None:intergenic 30.0%
TTCAAATTACTAAAGAGTGG+AGG - chr5_2:58886926-58886945 None:intergenic 30.0%
TGGTTCAAATTACTAAAGAG+TGG - chr5_2:58886929-58886948 None:intergenic 30.0%
ATGGACATTGATAAATCACA+TGG - chr5_2:58886949-58886968 None:intergenic 30.0%
CCAATTTCAAATCACAAGAT+AGG - chr5_2:58887014-58887033 None:intergenic 30.0%
! CCTATCTTGTGATTTGAAAT+TGG + chr5_2:58887011-58887030 Msa0778430:intron 30.0%
ATTCATCCAACAATCTCAAT+GGG - chr5_2:58887554-58887573 None:intergenic 30.0%
TATTCATCCAACAATCTCAA+TGG - chr5_2:58887555-58887574 None:intergenic 30.0%
TCAATAAACAATACTCCCTT+AGG + chr5_2:58887827-58887846 Msa0778430:intron 30.0%
TATCACAAACAAAATTGCGA+AGG + chr5_2:58888094-58888113 Msa0778430:intron 30.0%
!!! GTGCGTTTTTTTTTCATTGA+AGG + chr5_2:58888128-58888147 Msa0778430:intron 30.0%
!!! GTGTTTTGTTTTTGTCAAAC+AGG + chr5_2:58888153-58888172 Msa0778430:intron 30.0%
!!! ATTTTAAAATAATGGTGGCG+TGG + chr5_2:58888198-58888217 Msa0778430:intron 30.0%
! AATGGAAGCAGTTTAACTTT+GGG - chr5_2:58888408-58888427 None:intergenic 30.0%
! AAATGGAAGCAGTTTAACTT+TGG - chr5_2:58888409-58888428 None:intergenic 30.0%
AGTTAAACTGCTTCCATTTA+AGG + chr5_2:58888410-58888429 Msa0778430:CDS 30.0%
GTTAAACTGCTTCCATTTAA+GGG + chr5_2:58888411-58888430 Msa0778430:CDS 30.0%
AACAGTCACAAAATAGATAG+CGG - chr5_2:58888513-58888532 None:intergenic 30.0%
! ACAAGCCTAAGTGTAATTTT+CGG + chr5_2:58888613-58888632 Msa0778430:intron 30.0%
AATGTCCGAAAATTACACTT+AGG - chr5_2:58888621-58888640 None:intergenic 30.0%
TTATGATAACAAATGCGCAA+TGG - chr5_2:58888653-58888672 None:intergenic 30.0%
ATCATAACATTTAGTCGCAT+TGG + chr5_2:58888666-58888685 Msa0778430:intron 30.0%
! TGATATCTTAACCTTTTCAG+AGG + chr5_2:58888972-58888991 Msa0778430:intron 30.0%
TACTTGTGTCTCAAAATTGT+TGG - chr5_2:58889096-58889115 None:intergenic 30.0%
! GTGAGGTTTGAAATTTGAAA+GGG - chr5_2:58889134-58889153 None:intergenic 30.0%
ATTTGCGAGGATTAAGAAAT+TGG + chr5_2:58889253-58889272 Msa0778430:intron 30.0%
TATCATAACTCATAAGACCT+CGG - chr5_2:58889489-58889508 None:intergenic 30.0%
AAAACCATAGTTAAGTCTAC+TGG + chr5_2:58889594-58889613 Msa0778430:intron 30.0%
GATAGACCATACAAAAAACA+TGG + chr5_2:58889728-58889747 Msa0778430:intron 30.0%
!!! TTTGGTCCATGTTTTTTGTA+TGG - chr5_2:58889737-58889756 None:intergenic 30.0%
ATTGCTAAAGAATTATGGCA+TGG + chr5_2:58889948-58889967 Msa0778430:CDS 30.0%
TTAATGAATTGATGCTTGTG+AGG + chr5_2:58890027-58890046 Msa0778430:CDS 30.0%
! AATATTGCTGATGGTTTTTG+TGG - chr5_2:58890192-58890211 None:intergenic 30.0%
!! AAAAGCACTAATATTGCTGA+TGG - chr5_2:58890201-58890220 None:intergenic 30.0%
!!! TCTCTTCTTTTTTGTTTAGG+TGG + chr5_2:58890701-58890720 Msa0778430:intron 30.0%
!!! CTCTTCTTTTTTGTTTAGGT+GGG + chr5_2:58890702-58890721 Msa0778430:intron 30.0%
! ATCAAATTTGAAATGGATGC+CGG - chr5_2:58890739-58890758 None:intergenic 30.0%
!!! GATTCTTTTGAAATTCAACG+AGG + chr5_2:58890756-58890775 Msa0778430:CDS 30.0%
!! AATTTGGTGTGAATAGTCAA+AGG + chr5_2:58890957-58890976 Msa0778430:intron 30.0%
GTTGTACAAAATAGTGAAAG+AGG + chr5_2:58890982-58891001 Msa0778430:intron 30.0%
TGTACAAAATAGTGAAAGAG+GGG + chr5_2:58890984-58891003 Msa0778430:intron 30.0%
ATCACTTATTGTGCAAAAGA+AGG + chr5_2:58891063-58891082 Msa0778430:intron 30.0%
ATGGAGGCTAAATCTTATAA+AGG + chr5_2:58891144-58891163 Msa0778430:intron 30.0%
AACGGTATAAAAATACAGTG+TGG - chr5_2:58891248-58891267 None:intergenic 30.0%
! CCCTAGATAAATTTTCTTGT+TGG - chr5_2:58891380-58891399 None:intergenic 30.0%
ATCTATTTGTCTGCTCTATT+AGG + chr5_2:58891533-58891552 Msa0778430:intron 30.0%
AAACAAGCTGAAAATGACTT+TGG + chr5_2:58891636-58891655 Msa0778430:CDS 30.0%
ACTATAACTATTCCAATTGG+TGG + chr5_2:58891675-58891694 Msa0778430:three_prime_UTR 30.0%
!!! AGCAAATGTTTGGTTTTGGT+TGG + chr5_2:58882376-58882395 Msa0778430:CDS 35.0%
!!! AAATGTTTGGTTTTGGTTGG+AGG + chr5_2:58882379-58882398 Msa0778430:CDS 35.0%
!!! TGACTGACTTTTGAGTTTGA+AGG - chr5_2:58882450-58882469 None:intergenic 35.0%
AAACACTTATGAGACTACTC+GGG - chr5_2:58882889-58882908 None:intergenic 35.0%
! CTTTGAAGGTGAAAACATCA+AGG - chr5_2:58883019-58883038 None:intergenic 35.0%
CACCTTCAAAGATTCGAAAT+AGG + chr5_2:58883028-58883047 Msa0778430:intron 35.0%
TCACATGTGCACTATAGAAT+TGG - chr5_2:58883098-58883117 None:intergenic 35.0%
TCATACCTCATTTGATCCAA+TGG - chr5_2:58883160-58883179 None:intergenic 35.0%
GGTAGAAACAAACTTGTACA+CGG + chr5_2:58883199-58883218 Msa0778430:intron 35.0%
TCTAATGTGCATAGGTAAGT+TGG - chr5_2:58883232-58883251 None:intergenic 35.0%
!!! TGGTTTTGTCTAATGTGCAT+AGG - chr5_2:58883240-58883259 None:intergenic 35.0%
GAGCTCCTTTATTCTTCATA+GGG + chr5_2:58884271-58884290 Msa0778430:intron 35.0%
GATAATTATATAGCCAGGCT+TGG + chr5_2:58884343-58884362 Msa0778430:intron 35.0%
!! TACTTTTTGTCCCATCATCT+TGG + chr5_2:58884424-58884443 Msa0778430:intron 35.0%
! GCAAAGTAGTGAACTTTTAC+TGG - chr5_2:58884595-58884614 None:intergenic 35.0%
TTGAATTTGATCGCATGAAG+TGG - chr5_2:58884617-58884636 None:intergenic 35.0%
TTATGAAAGTGGGATGATGT+GGG + chr5_2:58884644-58884663 Msa0778430:intron 35.0%
! GATGGCTTTTATGTTCTTTG+TGG + chr5_2:58885041-58885060 Msa0778430:intron 35.0%
! AACAGAGGGAGTAAACATTT+TGG + chr5_2:58885297-58885316 Msa0778430:intron 35.0%
CTTCTATGTAATAGCGTCAT+TGG - chr5_2:58885432-58885451 None:intergenic 35.0%
!!! ATAGAAGTTTTGGCTCTGTA+TGG + chr5_2:58885445-58885464 Msa0778430:intron 35.0%
AATAATCTTCTGATAGTCGG+TGG - chr5_2:58885492-58885511 None:intergenic 35.0%
!! ATTTTGACCTTTTGCCAAGT+TGG + chr5_2:58885555-58885574 Msa0778430:intron 35.0%
ACTGTAATGCATGGCATTAT+AGG + chr5_2:58885765-58885784 Msa0778430:intron 35.0%
TTGATGAGAAATGCTCCTTA+AGG - chr5_2:58886035-58886054 None:intergenic 35.0%
CAATGTTATCAATACAGTCG+AGG - chr5_2:58886146-58886165 None:intergenic 35.0%
ATGGAAAAGGTTGAGCAAAA+AGG + chr5_2:58886606-58886625 Msa0778430:intron 35.0%
AAGATAAACCAGAGTGTGAA+CGG + chr5_2:58886658-58886677 Msa0778430:intron 35.0%
GGAGAAATGTTGTAAGAAGT+TGG - chr5_2:58886729-58886748 None:intergenic 35.0%
! TAGCCCTTTCCTTGATTTTA+GGG - chr5_2:58886782-58886801 None:intergenic 35.0%
! TTAGCCCTTTCCTTGATTTT+AGG - chr5_2:58886783-58886802 None:intergenic 35.0%
AATTACTAAAGAGTGGAGGA+TGG - chr5_2:58886922-58886941 None:intergenic 35.0%
! CTTGTGATTTGAAATTGGTC+TGG + chr5_2:58887016-58887035 Msa0778430:intron 35.0%
! ACCTTTTTAACCTTCCTCTT+AGG + chr5_2:58887053-58887072 Msa0778430:intron 35.0%
TTAGGCACGTATTATTGGAT+TGG + chr5_2:58887071-58887090 Msa0778430:intron 35.0%
! AAATGATAAAGGTTCTGGTC+TGG + chr5_2:58887109-58887128 Msa0778430:intron 35.0%
AGAATAGGCAGTTAGATTCA+TGG - chr5_2:58887320-58887339 None:intergenic 35.0%
AAATATGGCAGTTCCATTCA+AGG - chr5_2:58887352-58887371 None:intergenic 35.0%
CTTACAGCTTAATTCTTGTC+TGG + chr5_2:58887649-58887668 Msa0778430:intron 35.0%
AAGAAGTGAACAACTGAAAG+AGG + chr5_2:58887677-58887696 Msa0778430:intron 35.0%
! TTTTGTCAAACAGGCAGAAT+TGG + chr5_2:58888162-58888181 Msa0778430:intron 35.0%
TTGAACACTCTTTCACTCAT+TGG - chr5_2:58888225-58888244 None:intergenic 35.0%
AAATCACCTGATAGTCTGAA+GGG - chr5_2:58888458-58888477 None:intergenic 35.0%
!! AGGCTTGTTTGATTGTGTTT+TGG - chr5_2:58888601-58888620 None:intergenic 35.0%
! TCAGATTGTTCCAGGTTTTA+GGG + chr5_2:58888718-58888737 Msa0778430:intron 35.0%
! TGACTTGTCCAAATATTGCA+GGG - chr5_2:58888772-58888791 None:intergenic 35.0%
! ATGACTTGTCCAAATATTGC+AGG - chr5_2:58888773-58888792 None:intergenic 35.0%
TGCAATATTTGGACAAGTCA+TGG + chr5_2:58888772-58888791 Msa0778430:CDS 35.0%
TGCTAAATCCGTCAAAACAT+AGG - chr5_2:58888801-58888820 None:intergenic 35.0%
!!! TATGTTTTGACGGATTTAGC+AGG + chr5_2:58888800-58888819 Msa0778430:CDS 35.0%
!! TAAGGCGTTGATGAAGAATA+TGG - chr5_2:58888874-58888893 None:intergenic 35.0%
TGTGTCTCAAAATTGTTGGA+AGG - chr5_2:58889092-58889111 None:intergenic 35.0%
! GGTGAGGTTTGAAATTTGAA+AGG - chr5_2:58889135-58889154 None:intergenic 35.0%
!! ATTAGTTTGTCTCCTGTGAT+GGG - chr5_2:58889162-58889181 None:intergenic 35.0%
!! AATTAGTTTGTCTCCTGTGA+TGG - chr5_2:58889163-58889182 None:intergenic 35.0%
AGCCTAAATATTTGTATCCG+AGG + chr5_2:58889469-58889488 Msa0778430:intron 35.0%
GACCTCGGATACAAATATTT+AGG - chr5_2:58889474-58889493 None:intergenic 35.0%
! TACTACCTTAGGGCATATTT+TGG - chr5_2:58889755-58889774 None:intergenic 35.0%
ACAAAGAGACTACTACCTTA+GGG - chr5_2:58889765-58889784 None:intergenic 35.0%
TACAAAGAGACTACTACCTT+AGG - chr5_2:58889766-58889785 None:intergenic 35.0%
AATTGATGCTTGTGAGGTAT+GGG + chr5_2:58890033-58890052 Msa0778430:intron 35.0%
ATGAAGTAGCTTGATGTCAA+TGG - chr5_2:58890228-58890247 None:intergenic 35.0%
! ACAGATAAAGATGCTTTGGA+AGG - chr5_2:58890285-58890304 None:intergenic 35.0%
AGTGACAGATAAAGATGCTT+TGG - chr5_2:58890289-58890308 None:intergenic 35.0%
!! GCATCTTTATCTGTCACTTT+AGG + chr5_2:58890291-58890310 Msa0778430:intron 35.0%
GCTAACACATATGCTAATGT+AGG - chr5_2:58890625-58890644 None:intergenic 35.0%
GTTTCTCGATCTCTTTCATT+TGG + chr5_2:58890653-58890672 Msa0778430:intron 35.0%
!! GACCTTTTGAAGAACTAACA+TGG + chr5_2:58891125-58891144 Msa0778430:intron 35.0%
! CTCCATGTTAGTTCTTCAAA+AGG - chr5_2:58891130-58891149 None:intergenic 35.0%
!! CTTTTGAAGAACTAACATGG+AGG + chr5_2:58891128-58891147 Msa0778430:intron 35.0%
GGTATAAAAATACAGTGTGG+AGG - chr5_2:58891245-58891264 None:intergenic 35.0%
!! ATCTATTTATGGTAGTGGAG+TGG - chr5_2:58891485-58891504 None:intergenic 35.0%
TATTTGTCTGCTCTATTAGG+TGG + chr5_2:58891536-58891555 Msa0778430:intron 35.0%
ATCACTCTACTGTAAAACTC+TGG - chr5_2:58891606-58891625 None:intergenic 35.0%
TGTAGTGTTGCATGTCTAAT+AGG + chr5_2:58891698-58891717 Msa0778430:three_prime_UTR 35.0%
!! TGTGGTTGTGTAATGGGTTT+CGG - chr5_2:58882270-58882289 None:intergenic 40.0%
! GTGGTTTGTGGTTGTGTAAT+GGG - chr5_2:58882276-58882295 None:intergenic 40.0%
!! GCGAAGCAAATGTTTGGTTT+TGG + chr5_2:58882372-58882391 Msa0778430:CDS 40.0%
GAGCTTGAGAAGAAAGAAAG+TGG - chr5_2:58882428-58882447 None:intergenic 40.0%
CTATAGTGCACATGTGAGAT+AGG + chr5_2:58883101-58883120 Msa0778430:intron 40.0%
GCTTGTTTCAACCATTCCAT+TGG + chr5_2:58883141-58883160 Msa0778430:intron 40.0%
CCTCATTTGATCCAATGGAA+TGG - chr5_2:58883155-58883174 None:intergenic 40.0%
CCATTCCATTGGATCAAATG+AGG + chr5_2:58883152-58883171 Msa0778430:intron 40.0%
GATGTGACTTATTGATCCGA+TGG + chr5_2:58883178-58883197 Msa0778430:intron 40.0%
AATACCGTAGAGTGAATCCT+AGG + chr5_2:58883581-58883600 Msa0778430:intron 40.0%
ATACCGTAGAGTGAATCCTA+GGG + chr5_2:58883582-58883601 Msa0778430:intron 40.0%
GGTTCGCTGCATTATCAATT+CGG - chr5_2:58883673-58883692 None:intergenic 40.0%
! AAAAAACTGAGTGCATTGGC+TGG + chr5_2:58883744-58883763 Msa0778430:intron 40.0%
!! TTTATGGCGTGAGAGTACTT+AGG - chr5_2:58883991-58884010 None:intergenic 40.0%
! TTCTGTTTTGTGTCTCCTAC+AGG + chr5_2:58884022-58884041 Msa0778430:intron 40.0%
ACTATAGCTGGAAAGAAGAG+TGG + chr5_2:58884058-58884077 Msa0778430:CDS 40.0%
!! TTGTTTCTGAACAGCTGACT+AGG + chr5_2:58884116-58884135 Msa0778430:CDS 40.0%
TCATTTGGTAAAACAGCTCC+AGG + chr5_2:58884219-58884238 Msa0778430:intron 40.0%
TGAAGAATAAAGGAGCTCGT+GGG - chr5_2:58884269-58884288 None:intergenic 40.0%
ATGAAGAATAAAGGAGCTCG+TGG - chr5_2:58884270-58884289 None:intergenic 40.0%
CGAGCTCCTTTATTCTTCAT+AGG + chr5_2:58884270-58884289 Msa0778430:intron 40.0%
CCTTGGATATCCAAGATGAT+GGG - chr5_2:58884437-58884456 None:intergenic 40.0%
CCATCATCTTGGATATCCAA+GGG + chr5_2:58884435-58884454 Msa0778430:intron 40.0%
TCGATGTGATAACATTCCCT+TGG - chr5_2:58884454-58884473 None:intergenic 40.0%
CTTATGAAAGTGGGATGATG+TGG + chr5_2:58884643-58884662 Msa0778430:intron 40.0%
!! GTGTTGTTTCTGCTGTAACT+AGG + chr5_2:58884812-58884831 Msa0778430:intron 40.0%
!! TGGCTTTGAATCACAACAGA+AGG + chr5_2:58884849-58884868 Msa0778430:CDS 40.0%
GCATCATATGTTGTGGTCAT+TGG + chr5_2:58884877-58884896 Msa0778430:CDS 40.0%
! TATGTTGTGGTCATTGGTCT+TGG + chr5_2:58884883-58884902 Msa0778430:CDS 40.0%
CTTCTATGCTCTTGAGATCA+GGG + chr5_2:58884926-58884945 Msa0778430:CDS 40.0%
GATTGGAAAGCTTCTTCTTG+TGG + chr5_2:58884948-58884967 Msa0778430:CDS 40.0%
TCTTCTTGTGGACTTTGATC+AGG + chr5_2:58884960-58884979 Msa0778430:CDS 40.0%
AGAGAGAATAAATGGGTGAG+TGG + chr5_2:58885180-58885199 Msa0778430:intron 40.0%
TAAATGGGTGAGTGGATCAA+TGG + chr5_2:58885188-58885207 Msa0778430:intron 40.0%
AGTGGATCAATGGAAACGTA+AGG + chr5_2:58885198-58885217 Msa0778430:intron 40.0%
GTGGATCAATGGAAACGTAA+GGG + chr5_2:58885199-58885218 Msa0778430:intron 40.0%
AGACATGTACATAGGAACAG+AGG + chr5_2:58885282-58885301 Msa0778430:intron 40.0%
GACATGTACATAGGAACAGA+GGG + chr5_2:58885283-58885302 Msa0778430:intron 40.0%
! ATTTCCGGAGTGTCAAATAG+AGG + chr5_2:58886056-58886075 Msa0778430:CDS 40.0%
TTTGCCTCTATTTGACACTC+CGG - chr5_2:58886063-58886082 None:intergenic 40.0%
ACCGAAGAAGAAATTCTCTC+AGG + chr5_2:58886105-58886124 Msa0778430:CDS 40.0%
GCCTGAGAGAATTTCTTCTT+CGG - chr5_2:58886109-58886128 None:intergenic 40.0%
AATACAGTCGAGGACAAAGT+CGG - chr5_2:58886136-58886155 None:intergenic 40.0%
TAACGATCCATTGTCTCGAT+CGG + chr5_2:58886435-58886454 Msa0778430:CDS 40.0%
AACATTACCGATCGAGACAA+TGG - chr5_2:58886445-58886464 None:intergenic 40.0%
GAGCAAAAAGGCTCTACAAA+TGG + chr5_2:58886618-58886637 Msa0778430:intron 40.0%
CAAAAAGGCTCTACAAATGG+TGG + chr5_2:58886621-58886640 Msa0778430:intron 40.0%
AAGAGAGTTTCTCTGTGGTT+AGG - chr5_2:58886704-58886723 None:intergenic 40.0%
TGGTAAAGAGAGTTTCTCTG+TGG - chr5_2:58886709-58886728 None:intergenic 40.0%
AAGGAATCAAGAGAACACCT+GGG - chr5_2:58886851-58886870 None:intergenic 40.0%
GCCTAAGAGGAAGGTTAAAA+AGG - chr5_2:58887057-58887076 None:intergenic 40.0%
ATAATACGTGCCTAAGAGGA+AGG - chr5_2:58887066-58887085 None:intergenic 40.0%
TCCTCTTAGGCACGTATTAT+TGG + chr5_2:58887066-58887085 Msa0778430:intron 40.0%
TCCAATAATACGTGCCTAAG+AGG - chr5_2:58887070-58887089 None:intergenic 40.0%
TGAGAGGCTTCTTAAACTTG+TGG - chr5_2:58887287-58887306 None:intergenic 40.0%
TCATGGTTGTCAAACTTGAG+AGG - chr5_2:58887303-58887322 None:intergenic 40.0%
TCAAGGTTGTAAGCGAGAAT+AGG - chr5_2:58887335-58887354 None:intergenic 40.0%
TTCTCGCTTACAACCTTGAA+TGG + chr5_2:58887336-58887355 Msa0778430:intron 40.0%
TGCCATATTTCTCGAGTCTA+TGG + chr5_2:58887362-58887381 Msa0778430:intron 40.0%
CATATTTCTCGAGTCTATGG+CGG + chr5_2:58887365-58887384 Msa0778430:intron 40.0%
GTGATGAGAAATACGAACCA+GGG - chr5_2:58887457-58887476 None:intergenic 40.0%
CTTCATCCCATTGAGATTGT+TGG + chr5_2:58887545-58887564 Msa0778430:intron 40.0%
GTTGGATGAATATTCTCGCA+TGG + chr5_2:58887563-58887582 Msa0778430:intron 40.0%
!!! TGTTTTTTTCTTCCATGGGG+TGG - chr5_2:58888054-58888073 None:intergenic 40.0%
! AAACAGGCAGAATTGGTAAC+TGG + chr5_2:58888169-58888188 Msa0778430:intron 40.0%
TCATACCTAATTACCGATGC+AGG + chr5_2:58888314-58888333 Msa0778430:intron 40.0%
! TCTTACCTGCATCGGTAATT+AGG - chr5_2:58888322-58888341 None:intergenic 40.0%
TGCCATGATCTTTCCTTAGA+CGG - chr5_2:58888347-58888366 None:intergenic 40.0%
! AGGAAAGATCATGGCATTGA+TGG + chr5_2:58888351-58888370 Msa0778430:CDS 40.0%
!! AAAGATCATGGCATTGATGG+TGG + chr5_2:58888354-58888373 Msa0778430:CDS 40.0%
GAAATCACCTGATAGTCTGA+AGG - chr5_2:58888459-58888478 None:intergenic 40.0%
! TCCTTTTGTCAGATTGTTCC+AGG + chr5_2:58888710-58888729 Msa0778430:intron 40.0%
ACCTGGAACAATCTGACAAA+AGG - chr5_2:58888714-58888733 None:intergenic 40.0%
! GTCAGATTGTTCCAGGTTTT+AGG + chr5_2:58888717-58888736 Msa0778430:intron 40.0%
TGCCTAGAACAGGTATGATA+CGG - chr5_2:58888745-58888764 None:intergenic 40.0%
TTGTCCAAATATTGCAGGGA+TGG - chr5_2:58888768-58888787 None:intergenic 40.0%
!! CATGGCTTCCTATGTTTTGA+CGG + chr5_2:58888790-58888809 Msa0778430:CDS 40.0%
ATGTCTCCTCATGCTCAATA+AGG - chr5_2:58888892-58888911 None:intergenic 40.0%
TAGTTATACCTGCACATGCA+TGG - chr5_2:58888927-58888946 None:intergenic 40.0%
ACACACTACTTGTATTTGCG+AGG + chr5_2:58889240-58889259 Msa0778430:intron 40.0%
TTTAGGCTACTCGTGATCAT+GGG - chr5_2:58889457-58889476 None:intergenic 40.0%
ATTTAGGCTACTCGTGATCA+TGG - chr5_2:58889458-58889477 None:intergenic 40.0%
ACTGCCAGTAGACTTAACTA+TGG - chr5_2:58889601-58889620 None:intergenic 40.0%
ATGGACCAAAATATGCCCTA+AGG + chr5_2:58889747-58889766 Msa0778430:intron 40.0%
GAATTGATGCTTGTGAGGTA+TGG + chr5_2:58890032-58890051 Msa0778430:intron 40.0%
ATTGATGCTTGTGAGGTATG+GGG + chr5_2:58890034-58890053 Msa0778430:intron 40.0%
TGACATCAAGCTACTTCATC+TGG + chr5_2:58890229-58890248 Msa0778430:intron 40.0%
!! AATCTCATGATGCTTGCTGT+TGG + chr5_2:58890520-58890539 Msa0778430:intron 40.0%
TCTGCTATGTTGTCTCAACT+CGG + chr5_2:58890588-58890607 Msa0778430:intron 40.0%
!! ATGGTAGTGGAGTGGAAAAA+AGG - chr5_2:58891477-58891496 None:intergenic 40.0%
!! GTGGTTGTGTAATGGGTTTC+GGG - chr5_2:58882269-58882288 None:intergenic 45.0%
! GGTGGTTTGTGGTTGTGTAA+TGG - chr5_2:58882277-58882296 None:intergenic 45.0%
! TAACTCTGTTGGCCTGACAT+CGG - chr5_2:58882314-58882333 None:intergenic 45.0%
CATGGAGCGAAGCAAATGTT+TGG + chr5_2:58882366-58882385 Msa0778430:exon 45.0%
!!! TGTTTGGTTTTGGTTGGAGG+TGG + chr5_2:58882382-58882401 Msa0778430:CDS 45.0%
TTTGCAGAAGAGGTTTACGG+CGG + chr5_2:58882541-58882560 Msa0778430:intron 45.0%
GGTTGAAACAAGCTTGTGCA+TGG - chr5_2:58883134-58883153 None:intergenic 45.0%
CATCCCTAGGATTCACTCTA+CGG - chr5_2:58883588-58883607 None:intergenic 45.0%
GTAGAGTGAATCCTAGGGAT+GGG + chr5_2:58883587-58883606 Msa0778430:intron 45.0%
! GATAATGCAGCGAACCCTTT+TGG + chr5_2:58883677-58883696 Msa0778430:intron 45.0%
GTTGACAGATGCACTATAGC+TGG + chr5_2:58884046-58884065 Msa0778430:CDS 45.0%
AGCTGGAAAGAAGAGTGGTA+AGG + chr5_2:58884063-58884082 Msa0778430:CDS 45.0%
TTTCGTGCTGCCGAATCATT+TGG + chr5_2:58884204-58884223 Msa0778430:intron 45.0%
GAAATGAGATTGCACGTTCC+TGG - chr5_2:58884240-58884259 None:intergenic 45.0%
TGGCATGTTTAGGCTGAACA+TGG + chr5_2:58884363-58884382 Msa0778430:intron 45.0%
CCCATCATCTTGGATATCCA+AGG + chr5_2:58884434-58884453 Msa0778430:intron 45.0%
CCCTTGGATATCCAAGATGA+TGG - chr5_2:58884438-58884457 None:intergenic 45.0%
GGTGAGTGCATCATATGTTG+TGG + chr5_2:58884870-58884889 Msa0778430:CDS 45.0%
!! TTGTGGTCATTGGTCTTGGA+GGG + chr5_2:58884887-58884906 Msa0778430:CDS 45.0%
GCTTCTATGCTCTTGAGATC+AGG + chr5_2:58884925-58884944 Msa0778430:CDS 45.0%
ATGCTCTTGAGATCAGGGAT+TGG + chr5_2:58884931-58884950 Msa0778430:CDS 45.0%
! CTTTGTGGATTTTTCCTGCC+TGG + chr5_2:58885056-58885075 Msa0778430:intron 45.0%
TGAAAACGACAAAACCAGGC+AGG - chr5_2:58885073-58885092 None:intergenic 45.0%
TTTCCAGCCAACTTGGCAAA+AGG - chr5_2:58885565-58885584 None:intergenic 45.0%
CACAGAATTTCCAGCCAACT+TGG - chr5_2:58885572-58885591 None:intergenic 45.0%
CTCAAAAGCTCAGTGCCTTA+AGG + chr5_2:58886017-58886036 Msa0778430:CDS 45.0%
ATACAGTCGAGGACAAAGTC+GGG - chr5_2:58886135-58886154 None:intergenic 45.0%
TTCTTGCTGCATGTGTACGT+AGG + chr5_2:58886329-58886348 Msa0778430:CDS 45.0%
TCTTGCTGCATGTGTACGTA+GGG + chr5_2:58886330-58886349 Msa0778430:CDS 45.0%
TTGAAGGTTCTATCTGCCAC+TGG + chr5_2:58886355-58886374 Msa0778430:CDS 45.0%
TGAAGGTTCTATCTGCCACT+GGG + chr5_2:58886356-58886375 Msa0778430:CDS 45.0%
AGGAGTCGAGAGAAGAGATA+TGG - chr5_2:58886508-58886527 None:intergenic 45.0%
GAAGGAATCAAGAGAACACC+TGG - chr5_2:58886852-58886871 None:intergenic 45.0%
ACTAAAGAGTGGAGGATGGT+GGG - chr5_2:58886918-58886937 None:intergenic 45.0%
TACTAAAGAGTGGAGGATGG+TGG - chr5_2:58886919-58886938 None:intergenic 45.0%
CGCCATAGACTCGAGAAATA+TGG - chr5_2:58887367-58887386 None:intergenic 45.0%
CGTGATGAGAAATACGAACC+AGG - chr5_2:58887458-58887477 None:intergenic 45.0%
AAACATATCCATCCACCCCA+TGG + chr5_2:58888039-58888058 Msa0778430:intron 45.0%
! TTTTTCTTCCATGGGGTGGA+TGG - chr5_2:58888050-58888069 None:intergenic 45.0%
CACCGTCTAAGGAAAGATCA+TGG + chr5_2:58888342-58888361 Msa0778430:CDS 45.0%
CTTCCATTTAAGGGTCCAAG+TGG + chr5_2:58888420-58888439 Msa0778430:CDS 45.0%
TCTCCACTTGGACCCTTAAA+TGG - chr5_2:58888426-58888445 None:intergenic 45.0%
GGAAAACCCTTCAGACTATC+AGG + chr5_2:58888449-58888468 Msa0778430:CDS 45.0%
ATGATACGGACCCTAAAACC+TGG - chr5_2:58888731-58888750 None:intergenic 45.0%
GTCCGTATCATACCTGTTCT+AGG + chr5_2:58888740-58888759 Msa0778430:CDS 45.0%
! TCAACGCCTTATTGAGCATG+AGG + chr5_2:58888883-58888902 Msa0778430:CDS 45.0%
GAGCATGAGGAGACATTGTA+CGG + chr5_2:58888896-58888915 Msa0778430:CDS 45.0%
AGCAAGGGGTAATGTGCAAT+TGG - chr5_2:58889050-58889069 None:intergenic 45.0%
!!! TTGTCTCCTGTGATGGGTTT+TGG - chr5_2:58889156-58889175 None:intergenic 45.0%
CTCGTGATCATGGGGAAAAT+TGG - chr5_2:58889448-58889467 None:intergenic 45.0%
TTAGGCTACTCGTGATCATG+GGG - chr5_2:58889456-58889475 None:intergenic 45.0%
ATTAGAGTGACACGTCTGCA+TGG + chr5_2:58889652-58889671 Msa0778430:intron 45.0%
AGGTTGCAAAAGACGTTGGA+CGG + chr5_2:58889988-58890007 Msa0778430:CDS 45.0%
TGCAACACTACACCACCAAT+TGG - chr5_2:58891690-58891709 None:intergenic 45.0%
!!! TTTTTATATAAATTTTTTGT+TGG + chr5_2:58889805-58889824 Msa0778430:intron 5.0%
! CTGTCTTGTTCGGTGGTTTG+TGG - chr5_2:58882288-58882307 None:intergenic 50.0%
! ACATCGGAGGCTGTCTTGTT+CGG - chr5_2:58882298-58882317 None:intergenic 50.0%
! GTTGGAGGTGGTGCTCTTTT+AGG + chr5_2:58882394-58882413 Msa0778430:CDS 50.0%
CGTAGAGTGAATCCTAGGGA+TGG + chr5_2:58883586-58883605 Msa0778430:intron 50.0%
CTAAAGCTCCTGCATACGCA+GGG - chr5_2:58883626-58883645 None:intergenic 50.0%
ACTAAAGCTCCTGCATACGC+AGG - chr5_2:58883627-58883646 None:intergenic 50.0%
CGGATTAAAAAAGGGCAGCC+TGG - chr5_2:58883653-58883672 None:intergenic 50.0%
GTGCATCTGTCAACACCTGT+AGG - chr5_2:58884040-58884059 None:intergenic 50.0%
TAGCCAGGCTTGGCATGTTT+AGG + chr5_2:58884353-58884372 Msa0778430:intron 50.0%
!! GTTGTGGTCATTGGTCTTGG+AGG + chr5_2:58884886-58884905 Msa0778430:CDS 50.0%
!! TGTGGTCATTGGTCTTGGAG+GGG + chr5_2:58884888-58884907 Msa0778430:CDS 50.0%
!! TGACCTTTTGCCAAGTTGGC+TGG + chr5_2:58885559-58885578 Msa0778430:intron 50.0%
GTTGCGACAAGAGCAGATGT+TGG + chr5_2:58885991-58886010 Msa0778430:CDS 50.0%
TACAGTCGAGGACAAAGTCG+GGG - chr5_2:58886134-58886153 None:intergenic 50.0%
CTTGCTGCATGTGTACGTAG+GGG + chr5_2:58886331-58886350 Msa0778430:CDS 50.0%
ATGTGTACGTAGGGGCTTGA+AGG + chr5_2:58886339-58886358 Msa0778430:CDS 50.0%
GAAGGTTCTATCTGCCACTG+GGG + chr5_2:58886357-58886376 Msa0778430:CDS 50.0%
TCAGCGATGCGTATTCTCGT+TGG - chr5_2:58886400-58886419 None:intergenic 50.0%
!! TAGGAGCATTGTGCTCTGGT+AGG - chr5_2:58886685-58886704 None:intergenic 50.0%
!! TGGTTAGGAGCATTGTGCTC+TGG - chr5_2:58886689-58886708 None:intergenic 50.0%
ATCAAGAGAACACCTGGGCA+AGG - chr5_2:58886846-58886865 None:intergenic 50.0%
TCGAGTCTATGGCGGTTTGA+CGG + chr5_2:58887373-58887392 Msa0778430:intron 50.0%
AGACGGTGTCTTACCTGCAT+CGG - chr5_2:58888330-58888349 None:intergenic 50.0%
TGCAGGTAAGACACCGTCTA+AGG + chr5_2:58888331-58888350 Msa0778430:intron 50.0%
TAAGGGTCCAAGTGGAGAAG+AGG + chr5_2:58888428-58888447 Msa0778430:CDS 50.0%
! GGGTTTTCCTCTTCTCCACT+TGG - chr5_2:58888438-58888457 None:intergenic 50.0%
GGCACCATCCCTGCAATATT+TGG + chr5_2:58888761-58888780 Msa0778430:CDS 50.0%
ACCTCACCAAAACCCATCAC+AGG + chr5_2:58889147-58889166 Msa0778430:intron 50.0%
!!! TCCTGTGATGGGTTTTGGTG+AGG - chr5_2:58889151-58889170 None:intergenic 50.0%
AGTGACACGTCTGCATGGTA+TGG + chr5_2:58889657-58889676 Msa0778430:intron 50.0%
!! TATGGCATGGAAGAAGTGCC+AGG + chr5_2:58889961-58889980 Msa0778430:CDS 50.0%
!! ATGGCATGGAAGAAGTGCCA+GGG + chr5_2:58889962-58889981 Msa0778430:CDS 50.0%
GAGCAGGTTGCAAAAGACGT+TGG + chr5_2:58889984-58890003 Msa0778430:CDS 50.0%
GGTTGCAAAAGACGTTGGAC+GGG + chr5_2:58889989-58890008 Msa0778430:CDS 50.0%
TAGGTGGGACAGTACGAAAC+CGG + chr5_2:58890717-58890736 Msa0778430:intron 50.0%
AGGTGGATGAGCATGAGTCA+CGG + chr5_2:58891553-58891572 Msa0778430:intron 50.0%
TGAGCATGAGTCACGGACAT+TGG + chr5_2:58891560-58891579 Msa0778430:CDS 50.0%
GGTCAGGTCATACAGCAGTC+GGG - chr5_2:58882232-58882251 None:intergenic 55.0%
GGGTCAGGTCATACAGCAGT+CGG - chr5_2:58882233-58882252 None:intergenic 55.0%
! TTTCGGGTAGCACAGCAGTC+GGG - chr5_2:58882253-58882272 None:intergenic 55.0%
! GTTTCGGGTAGCACAGCAGT+CGG - chr5_2:58882254-58882273 None:intergenic 55.0%
ACAAGACAGCCTCCGATGTC+AGG + chr5_2:58882299-58882318 Msa0778430:five_prime_UTR 55.0%
! TGCAGGAGCTTTAGTGCTCC+AGG + chr5_2:58883632-58883651 Msa0778430:intron 55.0%
CAGCCTAAACATGCCAAGCC+TGG - chr5_2:58884359-58884378 None:intergenic 55.0%
!! GTCATTGGTCTTGGAGGGGT+TGG + chr5_2:58884892-58884911 Msa0778430:CDS 55.0%
TGGTAGGACCGTTCACACTC+TGG - chr5_2:58886669-58886688 None:intergenic 55.0%
TATCAGATCGTGCCTTGCCC+AGG + chr5_2:58886831-58886850 Msa0778430:intron 55.0%
CGAGTCTATGGCGGTTTGAC+GGG + chr5_2:58887374-58887393 Msa0778430:intron 55.0%
GGCATCTTGCATACATGCCC+TGG + chr5_2:58887437-58887456 Msa0778430:intron 55.0%
CGGAACTTCCATGCATGTGC+AGG + chr5_2:58888916-58888935 Msa0778430:CDS 55.0%
! GTCTTTTGCAACCTGCTCCC+TGG - chr5_2:58889982-58890001 None:intergenic 55.0%
AAGACGTTGGACGGGCAATG+TGG + chr5_2:58889997-58890016 Msa0778430:CDS 55.0%
! TCGGAGGCTGTCTTGTTCGG+TGG - chr5_2:58882295-58882314 None:intergenic 60.0%
! CTCTGTTGGCCTGACATCGG+AGG - chr5_2:58882311-58882330 None:intergenic 60.0%
AGTCGAGGACAAAGTCGGGG+TGG - chr5_2:58886131-58886150 None:intergenic 60.0%
GTTCTATCTGCCACTGGGGC+TGG + chr5_2:58886361-58886380 Msa0778430:CDS 60.0%
!! GAGTGGAGGATGGTGGGACT+GGG - chr5_2:58886912-58886931 None:intergenic 60.0%
!! AGAGTGGAGGATGGTGGGAC+TGG - chr5_2:58886913-58886932 None:intergenic 60.0%
GCAGGGATGGTGCCTAGAAC+AGG - chr5_2:58888755-58888774 None:intergenic 60.0%
!! TGGAAGAAGTGCCAGGGAGC+AGG + chr5_2:58889968-58889987 Msa0778430:CDS 60.0%
GGTAGCACAGCAGTCGGGTC+AGG - chr5_2:58882248-58882267 None:intergenic 65.0%
CTAGGGATGGGACCCCTTCC+CGG + chr5_2:58883599-58883618 Msa0778430:intron 65.0%
CATACGCAGGGTCCGGGAAG+GGG - chr5_2:58883614-58883633 None:intergenic 65.0%
GCATACGCAGGGTCCGGGAA+GGG - chr5_2:58883615-58883634 None:intergenic 65.0%
TGCATACGCAGGGTCCGGGA+AGG - chr5_2:58883616-58883635 None:intergenic 65.0%
TTCCCGGACCCTGCGTATGC+AGG + chr5_2:58883615-58883634 Msa0778430:intron 65.0%
CTCCTGCATACGCAGGGTCC+GGG - chr5_2:58883620-58883639 None:intergenic 65.0%
GCTCCTGCATACGCAGGGTC+CGG - chr5_2:58883621-58883640 None:intergenic 65.0%
! AGCTCTAGCACCAGCCCCAG+TGG - chr5_2:58886374-58886393 None:intergenic 65.0%
CGGGAAGGGGTCCCATCCCT+AGG - chr5_2:58883601-58883620 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 58882229 58891840 58882229 ID=Msa0778430;Name=Msa0778430
chr5_2 mRNA 58882229 58891840 58882229 ID=Msa0778430-mRNA-1;Parent=Msa0778430;Name=Msa0778430-mRNA-1;_AED=0.03;_eAED=0.03;_QI=138|1|1|1|1|1|11|175|459
chr5_2 exon 58882229 58882461 58882229 ID=Msa0778430-mRNA-1:exon:17332;Parent=Msa0778430-mRNA-1
chr5_2 exon 58882548 58882597 58882548 ID=Msa0778430-mRNA-1:exon:17333;Parent=Msa0778430-mRNA-1
chr5_2 exon 58884044 58884137 58884044 ID=Msa0778430-mRNA-1:exon:17334;Parent=Msa0778430-mRNA-1
chr5_2 exon 58884834 58884981 58884834 ID=Msa0778430-mRNA-1:exon:17335;Parent=Msa0778430-mRNA-1
chr5_2 exon 58885961 58886173 58885961 ID=Msa0778430-mRNA-1:exon:17336;Parent=Msa0778430-mRNA-1
chr5_2 exon 58886322 58886456 58886322 ID=Msa0778430-mRNA-1:exon:17337;Parent=Msa0778430-mRNA-1
chr5_2 exon 58888336 58888470 58888336 ID=Msa0778430-mRNA-1:exon:17338;Parent=Msa0778430-mRNA-1
chr5_2 exon 58888722 58888937 58888722 ID=Msa0778430-mRNA-1:exon:17339;Parent=Msa0778430-mRNA-1
chr5_2 exon 58889924 58890048 58889924 ID=Msa0778430-mRNA-1:exon:17340;Parent=Msa0778430-mRNA-1
chr5_2 exon 58890720 58890777 58890720 ID=Msa0778430-mRNA-1:exon:17341;Parent=Msa0778430-mRNA-1
chr5_2 exon 58891555 58891840 58891555 ID=Msa0778430-mRNA-1:exon:17342;Parent=Msa0778430-mRNA-1
chr5_2 five_prime_UTR 58882229 58882366 58882229 ID=Msa0778430-mRNA-1:five_prime_utr;Parent=Msa0778430-mRNA-1
chr5_2 CDS 58882367 58882461 58882367 ID=Msa0778430-mRNA-1:cds;Parent=Msa0778430-mRNA-1
chr5_2 CDS 58882548 58882597 58882548 ID=Msa0778430-mRNA-1:cds;Parent=Msa0778430-mRNA-1
chr5_2 CDS 58884044 58884137 58884044 ID=Msa0778430-mRNA-1:cds;Parent=Msa0778430-mRNA-1
chr5_2 CDS 58884834 58884981 58884834 ID=Msa0778430-mRNA-1:cds;Parent=Msa0778430-mRNA-1
chr5_2 CDS 58885961 58886173 58885961 ID=Msa0778430-mRNA-1:cds;Parent=Msa0778430-mRNA-1
chr5_2 CDS 58886322 58886456 58886322 ID=Msa0778430-mRNA-1:cds;Parent=Msa0778430-mRNA-1
chr5_2 CDS 58888336 58888470 58888336 ID=Msa0778430-mRNA-1:cds;Parent=Msa0778430-mRNA-1
chr5_2 CDS 58888722 58888937 58888722 ID=Msa0778430-mRNA-1:cds;Parent=Msa0778430-mRNA-1
chr5_2 CDS 58889924 58890048 58889924 ID=Msa0778430-mRNA-1:cds;Parent=Msa0778430-mRNA-1
chr5_2 CDS 58890720 58890777 58890720 ID=Msa0778430-mRNA-1:cds;Parent=Msa0778430-mRNA-1
chr5_2 CDS 58891555 58891665 58891555 ID=Msa0778430-mRNA-1:cds;Parent=Msa0778430-mRNA-1
chr5_2 three_prime_UTR 58891666 58891840 58891666 ID=Msa0778430-mRNA-1:three_prime_utr;Parent=Msa0778430-mRNA-1
Gene Sequence

>Msa0778430

ATGGAGCGAAGCAAATGTTTGGTTTTGGTTGGAGGTGGTGCTCTTTTAGGTTCTCTCTCCACTTTCTTTCTTCTCAAGCTCCTTCAAACTCAAAAAAGAGGTTTACGGCGGCAATGTAATGAGAATGAAACTGCTGAATTCAATGGTGTTGACAGATGCACTATAGCTGGAAAGAAGAGTGGTAAGGTGATTAGTGACGATCTTCTGAAAGACGAGATTGTTTCTGAACAGCTGACTAGGAACATTCAGTTTTTTGGCTTTGAATCACAACAGAAGGTGAGTGCATCATATGTTGTGGTCATTGGTCTTGGAGGGGTTGGAAGTCATGCTGCTTCTATGCTCTTGAGATCAGGGATTGGAAAGCTTCTTCTTGTGGACTTTGATCAGGTTTCTCTTTCATCACTAAATCGACACGCTGTTGCGACAAGAGCAGATGTTGGCATCTCAAAAGCTCAGTGCCTTAAGGAGCATTTCTCATCAATATTTCCGGAGTGTCAAATAGAGGCAAAAGTGATGTTATATGATTCATCAACCGAAGAAGAAATTCTCTCAGGCCACCCCGACTTTGTCCTCGACTGTATTGATAACATTGATACAAAGGTGGCACTTCTTGCTGCATGTGTACGTAGGGGCTTGAAGGTTCTATCTGCCACTGGGGCTGGTGCTAGAGCTGATCCAACGAGAATACGCATCGCTGATCTAAGAGAATCTACTAACGATCCATTGTCTCGATCGGTAAGACACCGTCTAAGGAAAGATCATGGCATTGATGGTGGTATCCCTGTTGTGTTTTCTTTAGAAAAACCCAAAGTTAAACTGCTTCCATTTAAGGGTCCAAGTGGAGAAGAGGAAAACCCTTCAGACTATCAGATTGTTCCAGGTTTTAGGGTCCGTATCATACCTGTTCTAGGCACCATCCCTGCAATATTTGGACAAGTCATGGCTTCCTATGTTTTGACGGATTTAGCAGGATTGCATGTTCAAACAGAACCTGTAGTAAATTTTGATATGGATCATTACCATATTCTTCATCAACGCCTTATTGAGCATGAGGAGACATTGTACGGAACTTCCATGCATGTGCAGGTAGACGCTGAAGAAGTGAAGTATATTGCTAAAGAATTATGGCATGGAAGAAGTGCCAGGGAGCAGGTTGCAAAAGACGTTGGACGGGCAATGTGGCGATCAGTTAATGAATTGATGCTTGTGAGGTGGGACAGTACGAAACCGGCATCCATTTCAAATTTGATTCTTTTGAAATTCAACGAGGTGGATGAGCATGAGTCACGGACATTGGATGATGTAAAAGAAAAGGAACCAGAGTTTTACAGTAGAGTGATTGCTGTGTTAAAACAAGCTGAAAATGACTTTGGATTATGA

Protein sequence

>Msa0778430

MERSKCLVLVGGGALLGSLSTFFLLKLLQTQKRGLRRQCNENETAEFNGVDRCTIAGKKSGKVISDDLLKDEIVSEQLTRNIQFFGFESQQKVSASYVVVIGLGGVGSHAASMLLRSGIGKLLLVDFDQVSLSSLNRHAVATRADVGISKAQCLKEHFSSIFPECQIEAKVMLYDSSTEEEILSGHPDFVLDCIDNIDTKVALLAACVRRGLKVLSATGAGARADPTRIRIADLRESTNDPLSRSVRHRLRKDHGIDGGIPVVFSLEKPKVKLLPFKGPSGEEENPSDYQIVPGFRVRIIPVLGTIPAIFGQVMASYVLTDLAGLHVQTEPVVNFDMDHYHILHQRLIEHEETLYGTSMHVQVDAEEVKYIAKELWHGRSAREQVAKDVGRAMWRSVNELMLVRWDSTKPASISNLILLKFNEVDEHESRTLDDVKEKEPEFYSRVIAVLKQAENDFGL*