Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0778430 | sp|P36101|TCD2_YEAST | 35.945 | 434 | 238 | 8 | 29 | 452 | 32 | 435 | 1.62e-73 | 241 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0778430 | G7KG24 | 98.039 | 459 | 9 | 0 | 1 | 459 | 1 | 459 | 0.0 | 926 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0027230 | Msa0778430 | 0.805748 | 1.149221e-49 | -8.615850e-47 |
Msa0778430 | Msa1124110 | 0.811613 | 6.414092e-51 | -8.615850e-47 |
Msa0778430 | Msa1168950 | 0.803028 | 4.238020e-49 | -8.615850e-47 |
Msa0122970 | Msa0778430 | 0.802699 | 4.955544e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0778430 | MtrunA17_Chr5g0434401 | 98.039 | 459 | 9 | 0 | 1 | 459 | 1 | 459 | 0.0 | 926 |
Msa0778430 | MtrunA17_Chr2g0302261 | 31.852 | 135 | 75 | 3 | 88 | 207 | 78 | 210 | 5.31e-13 | 70.5 |
Msa0778430 | MtrunA17_Chr3g0132251 | 31.852 | 135 | 75 | 3 | 88 | 207 | 78 | 210 | 6.35e-13 | 70.5 |
Msa0778430 | MtrunA17_Chr5g0444711 | 29.197 | 137 | 96 | 1 | 85 | 221 | 80 | 215 | 1.92e-11 | 65.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0778430 | AT5G37530.2 | 75.546 | 458 | 104 | 3 | 2 | 457 | 3 | 454 | 0.0 | 664 |
Msa0778430 | AT5G37530.1 | 75.381 | 459 | 104 | 3 | 2 | 457 | 3 | 455 | 0.0 | 663 |
Msa0778430 | AT1G05350.1 | 32.353 | 136 | 74 | 4 | 88 | 207 | 75 | 208 | 2.50e-12 | 68.9 |
Msa0778430 | AT5G55130.1 | 31.387 | 137 | 93 | 1 | 85 | 221 | 81 | 216 | 2.40e-11 | 65.9 |
Find 117 sgRNAs with CRISPR-Local
Find 538 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGTTAAACTGCTTCCATTTA+AGG | 0.095386 | 5_2:+58888410 | Msa0778430:CDS |
GGCACCATCCCTGCAATATT+TGG | 0.184351 | 5_2:+58888761 | Msa0778430:CDS |
TCTCCACTTGGACCCTTAAA+TGG | 0.191266 | 5_2:-58888423 | None:intergenic |
TGTGGTTGTGTAATGGGTTT+CGG | 0.226540 | 5_2:-58882267 | None:intergenic |
GTGGTTGTGTAATGGGTTTC+GGG | 0.243514 | 5_2:-58882266 | None:intergenic |
GCATTTCTCATCAATATTTC+CGG | 0.277755 | 5_2:+58886041 | Msa0778430:CDS |
GTGGTTTGTGGTTGTGTAAT+GGG | 0.320895 | 5_2:-58882273 | None:intergenic |
GTTAAACTGCTTCCATTTAA+GGG | 0.329864 | 5_2:+58888411 | Msa0778430:CDS |
CAAAAGAATCAAATTTGAAA+TGG | 0.339139 | 5_2:-58890743 | None:intergenic |
AGTATATTGCTAAAGAATTA+TGG | 0.342122 | 5_2:+58889943 | Msa0778430:CDS |
GCTTCTATGCTCTTGAGATC+AGG | 0.342703 | 5_2:+58884925 | Msa0778430:CDS |
GTCATTGGTCTTGGAGGGGT+TGG | 0.361060 | 5_2:+58884892 | Msa0778430:CDS |
ATGTCTCCTCATGCTCAATA+AGG | 0.363849 | 5_2:-58888889 | None:intergenic |
GGTGGTTTGTGGTTGTGTAA+TGG | 0.365544 | 5_2:-58882274 | None:intergenic |
TCTTCTTGTGGACTTTGATC+AGG | 0.369024 | 5_2:+58884960 | Msa0778430:CDS |
AAATGGAAGCAGTTTAACTT+TGG | 0.369531 | 5_2:-58888406 | None:intergenic |
GGAAAACCCTTCAGACTATC+AGG | 0.373502 | 5_2:+58888449 | Msa0778430:CDS |
TTGAAGGTTCTATCTGCCAC+TGG | 0.383229 | 5_2:+58886355 | Msa0778430:CDS |
AAACAAGCTGAAAATGACTT+TGG | 0.385221 | 5_2:+58891636 | Msa0778430:CDS |
AATGGAAGCAGTTTAACTTT+GGG | 0.385825 | 5_2:-58888405 | None:intergenic |
GTCCGTATCATACCTGTTCT+AGG | 0.395244 | 5_2:+58888740 | Msa0778430:CDS |
TTGTGGTCATTGGTCTTGGA+GGG | 0.395430 | 5_2:+58884887 | Msa0778430:CDS |
GTTCTATCTGCCACTGGGGC+TGG | 0.398346 | 5_2:+58886361 | Msa0778430:CDS |
CATGGAGCGAAGCAAATGTT+TGG | 0.400140 | 5_2:+58882366 | Msa0778430:exon |
TAAGGCGTTGATGAAGAATA+TGG | 0.400338 | 5_2:-58888871 | None:intergenic |
CTCAAAAGCTCAGTGCCTTA+AGG | 0.405270 | 5_2:+58886017 | Msa0778430:CDS |
GCCTGAGAGAATTTCTTCTT+CGG | 0.413115 | 5_2:-58886106 | None:intergenic |
GCGAAGCAAATGTTTGGTTT+TGG | 0.413385 | 5_2:+58882372 | Msa0778430:CDS |
CTGTCTTGTTCGGTGGTTTG+TGG | 0.420862 | 5_2:-58882285 | None:intergenic |
TATGTTGTGGTCATTGGTCT+TGG | 0.420905 | 5_2:+58884883 | Msa0778430:CDS |
TGCAGGTAAGACACCGTCTA+AGG | 0.423897 | 5_2:+58888331 | Msa0778430:intron |
ATGACTTGTCCAAATATTGC+AGG | 0.433359 | 5_2:-58888770 | None:intergenic |
ACATCGGAGGCTGTCTTGTT+CGG | 0.434219 | 5_2:-58882295 | None:intergenic |
GCATCATATGTTGTGGTCAT+TGG | 0.440912 | 5_2:+58884877 | Msa0778430:CDS |
TGCAACACTACACCACCAAT+TGG | 0.443962 | 5_2:-58891687 | None:intergenic |
AATGAAACTGCTGAATTCAA+TGG | 0.447417 | 5_2:+58882576 | Msa0778430:CDS |
ATCAAATTTGAAATGGATGC+CGG | 0.447657 | 5_2:-58890736 | None:intergenic |
ATGTGTACGTAGGGGCTTGA+AGG | 0.448817 | 5_2:+58886339 | Msa0778430:CDS |
ACAAGACAGCCTCCGATGTC+AGG | 0.453766 | 5_2:+58882299 | Msa0778430:five_prime_UTR |
GCAGGGATGGTGCCTAGAAC+AGG | 0.459263 | 5_2:-58888752 | None:intergenic |
TTGATGAGAAATGCTCCTTA+AGG | 0.462220 | 5_2:-58886032 | None:intergenic |
GAGCTTGAGAAGAAAGAAAG+TGG | 0.468799 | 5_2:-58882425 | None:intergenic |
TGTAGTGTTGCATGTCTAAT+AGG | 0.468884 | 5_2:+58891698 | Msa0778430:three_prime_UTR |
AGAACTATAACTATTCCAAT+TGG | 0.472436 | 5_2:+58891672 | Msa0778430:three_prime_UTR |
AGGAAAGATCATGGCATTGA+TGG | 0.475499 | 5_2:+58888351 | Msa0778430:CDS |
GTTGTGGTCATTGGTCTTGG+AGG | 0.475695 | 5_2:+58884886 | Msa0778430:CDS |
TGGAAGAAGTGCCAGGGAGC+AGG | 0.480348 | 5_2:+58889968 | Msa0778430:CDS |
GGTAGCACAGCAGTCGGGTC+AGG | 0.486818 | 5_2:-58882245 | None:intergenic |
ATACAGTCGAGGACAAAGTC+GGG | 0.487096 | 5_2:-58886132 | None:intergenic |
CTTCTATGCTCTTGAGATCA+GGG | 0.488337 | 5_2:+58884926 | Msa0778430:CDS |
ATTGGATGATGTAAAAGAAA+AGG | 0.490721 | 5_2:+58891578 | Msa0778430:CDS |
GATTGGAAAGCTTCTTCTTG+TGG | 0.491466 | 5_2:+58884948 | Msa0778430:CDS |
TCTTGCTGCATGTGTACGTA+GGG | 0.492701 | 5_2:+58886330 | Msa0778430:CDS |
TGCAATATTTGGACAAGTCA+TGG | 0.494500 | 5_2:+58888772 | Msa0778430:CDS |
TGAAGGTTCTATCTGCCACT+GGG | 0.495632 | 5_2:+58886356 | Msa0778430:CDS |
TAGGTGGGACAGTACGAAAC+CGG | 0.500120 | 5_2:+58890717 | Msa0778430:intron |
TCCATATCAAAATTTACTAC+AGG | 0.506608 | 5_2:-58888842 | None:intergenic |
TGCCATGATCTTTCCTTAGA+CGG | 0.513121 | 5_2:-58888344 | None:intergenic |
GTTGACAGATGCACTATAGC+TGG | 0.514010 | 5_2:+58884046 | Msa0778430:CDS |
CGGAACTTCCATGCATGTGC+AGG | 0.515237 | 5_2:+58888916 | Msa0778430:CDS |
TATGGCATGGAAGAAGTGCC+AGG | 0.515687 | 5_2:+58889961 | Msa0778430:CDS |
TGGCTTTGAATCACAACAGA+AGG | 0.521703 | 5_2:+58884849 | Msa0778430:CDS |
TTGTTTCTGAACAGCTGACT+AGG | 0.524566 | 5_2:+58884116 | Msa0778430:CDS |
ATTTCCGGAGTGTCAAATAG+AGG | 0.529315 | 5_2:+58886056 | Msa0778430:CDS |
ATGCTCTTGAGATCAGGGAT+TGG | 0.538002 | 5_2:+58884931 | Msa0778430:CDS |
GAGCATGAGGAGACATTGTA+CGG | 0.540313 | 5_2:+58888896 | Msa0778430:CDS |
TAGTTATACCTGCACATGCA+TGG | 0.541186 | 5_2:-58888924 | None:intergenic |
TGTGGTCATTGGTCTTGGAG+GGG | 0.541816 | 5_2:+58884888 | Msa0778430:CDS |
GGGTCAGGTCATACAGCAGT+CGG | 0.545772 | 5_2:-58882230 | None:intergenic |
ACCGAAGAAGAAATTCTCTC+AGG | 0.550201 | 5_2:+58886105 | Msa0778430:CDS |
ACTATAACTATTCCAATTGG+TGG | 0.550298 | 5_2:+58891675 | Msa0778430:three_prime_UTR |
TTTGCCTCTATTTGACACTC+CGG | 0.555313 | 5_2:-58886060 | None:intergenic |
TCGGAGGCTGTCTTGTTCGG+TGG | 0.558829 | 5_2:-58882292 | None:intergenic |
AGGTTGCAAAAGACGTTGGA+CGG | 0.563486 | 5_2:+58889988 | Msa0778430:CDS |
TGCTAAATCCGTCAAAACAT+AGG | 0.565829 | 5_2:-58888798 | None:intergenic |
TAAGGGTCCAAGTGGAGAAG+AGG | 0.568996 | 5_2:+58888428 | Msa0778430:CDS |
AACATTACCGATCGAGACAA+TGG | 0.570390 | 5_2:-58886442 | None:intergenic |
GGTTGCAAAAGACGTTGGAC+GGG | 0.575361 | 5_2:+58889989 | Msa0778430:CDS |
TGAGCATGAGTCACGGACAT+TGG | 0.578240 | 5_2:+58891560 | Msa0778430:CDS |
GTTTCGGGTAGCACAGCAGT+CGG | 0.578359 | 5_2:-58882251 | None:intergenic |
AGCTGGAAAGAAGAGTGGTA+AGG | 0.578803 | 5_2:+58884063 | Msa0778430:CDS |
GGTCAGGTCATACAGCAGTC+GGG | 0.581928 | 5_2:-58882229 | None:intergenic |
ATCACTCTACTGTAAAACTC+TGG | 0.585148 | 5_2:-58891603 | None:intergenic |
CACCGTCTAAGGAAAGATCA+TGG | 0.587229 | 5_2:+58888342 | Msa0778430:CDS |
TCAACGCCTTATTGAGCATG+AGG | 0.591670 | 5_2:+58888883 | Msa0778430:CDS |
TGCCTAGAACAGGTATGATA+CGG | 0.591720 | 5_2:-58888742 | None:intergenic |
TCAGCGATGCGTATTCTCGT+TGG | 0.592786 | 5_2:-58886397 | None:intergenic |
GAAATCACCTGATAGTCTGA+AGG | 0.592855 | 5_2:-58888456 | None:intergenic |
TTCTTGCTGCATGTGTACGT+AGG | 0.597754 | 5_2:+58886329 | Msa0778430:CDS |
TAACTCTGTTGGCCTGACAT+CGG | 0.599955 | 5_2:-58882311 | None:intergenic |
AATACAGTCGAGGACAAAGT+CGG | 0.603469 | 5_2:-58886133 | None:intergenic |
TATTGATAACATTGATACAA+AGG | 0.607266 | 5_2:+58886152 | Msa0778430:CDS |
CTCTGTTGGCCTGACATCGG+AGG | 0.611110 | 5_2:-58882308 | None:intergenic |
TAACGATCCATTGTCTCGAT+CGG | 0.611640 | 5_2:+58886435 | Msa0778430:CDS |
ATTGCTAAAGAATTATGGCA+TGG | 0.615056 | 5_2:+58889948 | Msa0778430:CDS |
ATGATACGGACCCTAAAACC+TGG | 0.616259 | 5_2:-58888728 | None:intergenic |
GTTGCGACAAGAGCAGATGT+TGG | 0.616352 | 5_2:+58885991 | Msa0778430:CDS |
AAATCACCTGATAGTCTGAA+GGG | 0.617610 | 5_2:-58888455 | None:intergenic |
TTGTCCAAATATTGCAGGGA+TGG | 0.619227 | 5_2:-58888765 | None:intergenic |
AAAGATCATGGCATTGATGG+TGG | 0.626212 | 5_2:+58888354 | Msa0778430:CDS |
GAGCAGGTTGCAAAAGACGT+TGG | 0.631332 | 5_2:+58889984 | Msa0778430:CDS |
CTTCCATTTAAGGGTCCAAG+TGG | 0.631821 | 5_2:+58888420 | Msa0778430:CDS |
TGACTTGTCCAAATATTGCA+GGG | 0.641613 | 5_2:-58888769 | None:intergenic |
AAGACGTTGGACGGGCAATG+TGG | 0.651648 | 5_2:+58889997 | Msa0778430:CDS |
ATGGCATGGAAGAAGTGCCA+GGG | 0.652276 | 5_2:+58889962 | Msa0778430:CDS |
AGCTCTAGCACCAGCCCCAG+TGG | 0.652736 | 5_2:-58886371 | None:intergenic |
AGGTGGATGAGCATGAGTCA+CGG | 0.655267 | 5_2:+58891553 | Msa0778430:intron |
ACTATAGCTGGAAAGAAGAG+TGG | 0.663449 | 5_2:+58884058 | Msa0778430:CDS |
TTAATGAATTGATGCTTGTG+AGG | 0.664450 | 5_2:+58890027 | Msa0778430:CDS |
CTTGCTGCATGTGTACGTAG+GGG | 0.674097 | 5_2:+58886331 | Msa0778430:CDS |
CAATGTTATCAATACAGTCG+AGG | 0.674794 | 5_2:-58886143 | None:intergenic |
TACAGTCGAGGACAAAGTCG+GGG | 0.678561 | 5_2:-58886131 | None:intergenic |
TTTCTAAAGAAAACACAACA+GGG | 0.688114 | 5_2:-58888380 | None:intergenic |
AGTCGAGGACAAAGTCGGGG+TGG | 0.709352 | 5_2:-58886128 | None:intergenic |
GAAGGTTCTATCTGCCACTG+GGG | 0.721240 | 5_2:+58886357 | Msa0778430:CDS |
TTTGCAGAAGAGGTTTACGG+CGG | 0.727491 | 5_2:+58882541 | Msa0778430:intron |
GGTGAGTGCATCATATGTTG+TGG | 0.730215 | 5_2:+58884870 | Msa0778430:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ACAATTATTAAAAGTAATAA+TGG | - | chr5_2:58883381-58883400 | None:intergenic | 10.0% |
!!! | GACTTTTTTTTTTTTTTTTT+TGG | + | chr5_2:58883893-58883912 | Msa0778430:intron | 10.0% |
!! | TATTTATTTATTAAATGAGA+AGG | + | chr5_2:58885939-58885958 | Msa0778430:intron | 10.0% |
!!! | TAGTTAATCTAAATTTTAAA+TGG | - | chr5_2:58887991-58888010 | None:intergenic | 10.0% |
!!! | ATTTAAAATTTAGATTAACT+AGG | + | chr5_2:58887990-58888009 | Msa0778430:intron | 10.0% |
!!! | TTTGTTTCTATTTTTTTTAT+AGG | + | chr5_2:58889902-58889921 | Msa0778430:intron | 10.0% |
!!! | AAATTAGGAAAAATTTATTT+TGG | - | chr5_2:58891404-58891423 | None:intergenic | 10.0% |
!!! | TAAATTTTTCCTAATTTTAT+AGG | + | chr5_2:58891407-58891426 | Msa0778430:intron | 10.0% |
!!! | AAATTTTTCCTAATTTTATA+GGG | + | chr5_2:58891408-58891427 | Msa0778430:intron | 10.0% |
!! | GTAAATATATTATCTATTTA+TGG | - | chr5_2:58891496-58891515 | None:intergenic | 10.0% |
!!! | ATTATAACTGTTAAATTTTT+TGG | + | chr5_2:58891744-58891763 | Msa0778430:three_prime_UTR | 10.0% |
!! | TTTACAAAATATCATCTTTA+GGG | - | chr5_2:58883314-58883333 | None:intergenic | 15.0% |
!!! | TGTGTATATTAATTGATTTA+CGG | - | chr5_2:58884308-58884327 | None:intergenic | 15.0% |
!!! | CTGTTAACTATTTATATTTT+GGG | + | chr5_2:58884727-58884746 | Msa0778430:intron | 15.0% |
!! | GTAAAATAATTGATAAGATA+AGG | - | chr5_2:58885142-58885161 | None:intergenic | 15.0% |
!!! | AATAAAGTAGTTTTAACTTT+TGG | + | chr5_2:58885861-58885880 | Msa0778430:intron | 15.0% |
!!! | TATGGTTTTTGTTAAAAATT+AGG | - | chr5_2:58889583-58889602 | None:intergenic | 15.0% |
!!! | TATTGCTCTAAAATAAAATT+TGG | + | chr5_2:58890941-58890960 | Msa0778430:intron | 15.0% |
!! | AAGGATAGTTTATTTATTAA+AGG | + | chr5_2:58891163-58891182 | Msa0778430:intron | 15.0% |
!! | AGGATAGTTTATTTATTAAA+GGG | + | chr5_2:58891164-58891183 | Msa0778430:intron | 15.0% |
!!! | AAATTATGAGAAATGTTTTT+TGG | + | chr5_2:58891206-58891225 | Msa0778430:intron | 15.0% |
!!! | ACACAATTTTTGTATTTTTT+AGG | - | chr5_2:58891315-58891334 | None:intergenic | 15.0% |
!! | ACAAATAGATATTTATTATC+TGG | - | chr5_2:58891523-58891542 | None:intergenic | 15.0% |
!! | AGTAAAAAAGACAAGATTAA+AGG | - | chr5_2:58882485-58882504 | None:intergenic | 20.0% |
!!! | TTTTTTTTTTTTTGCAGAAG+AGG | + | chr5_2:58882531-58882550 | Msa0778430:intron | 20.0% |
!! | TGCTATAATACTTAATTAAG+TGG | - | chr5_2:58882699-58882718 | None:intergenic | 20.0% |
!!! | AATTTTGTAACTACAAATGA+AGG | + | chr5_2:58883072-58883091 | Msa0778430:intron | 20.0% |
!!! | TCATTTTCCATTTTCATTTA+TGG | - | chr5_2:58883260-58883279 | None:intergenic | 20.0% |
!! | GTTTACAAAATATCATCTTT+AGG | - | chr5_2:58883315-58883334 | None:intergenic | 20.0% |
!! | TTTGTAAACTGTAAATGTTA+AGG | + | chr5_2:58883326-58883345 | Msa0778430:intron | 20.0% |
!!! | ACTTTTAATAATTGTTGCAT+TGG | + | chr5_2:58883386-58883405 | Msa0778430:intron | 20.0% |
!! | TGAATAAATATTTGAAAGCA+GGG | + | chr5_2:58883455-58883474 | Msa0778430:intron | 20.0% |
!! | TATCAATTCGGATTAAAAAA+GGG | - | chr5_2:58883661-58883680 | None:intergenic | 20.0% |
!! | TTATCAATTCGGATTAAAAA+AGG | - | chr5_2:58883662-58883681 | None:intergenic | 20.0% |
!! | CAGAAATCTTATTAACTTTA+TGG | - | chr5_2:58884007-58884026 | None:intergenic | 20.0% |
!! | AGAGAAAATGTCAAAATAAT+TGG | - | chr5_2:58884157-58884176 | None:intergenic | 20.0% |
!!! | GTGTATATTAATTGATTTAC+GGG | - | chr5_2:58884307-58884326 | None:intergenic | 20.0% |
!!! | TTTCATAAGTTTTCTATTTC+AGG | + | chr5_2:58884508-58884527 | Msa0778430:intron | 20.0% |
!!! | TTCATAAGTTTTCTATTTCA+GGG | + | chr5_2:58884509-58884528 | Msa0778430:intron | 20.0% |
!!! | GCTTTTTTATTTGAGTTAAA+GGG | + | chr5_2:58884531-58884550 | Msa0778430:intron | 20.0% |
!!! | CTTTTTTATTTGAGTTAAAG+GGG | + | chr5_2:58884532-58884551 | Msa0778430:intron | 20.0% |
!!! | TTTTTTATTTGAGTTAAAGG+GGG | + | chr5_2:58884533-58884552 | Msa0778430:intron | 20.0% |
!! | CCAAAATATAAATAGTTAAC+AGG | - | chr5_2:58884729-58884748 | None:intergenic | 20.0% |
!!! | CCTGTTAACTATTTATATTT+TGG | + | chr5_2:58884726-58884745 | Msa0778430:intron | 20.0% |
!!! | TTAACTATTTATATTTTGGG+TGG | + | chr5_2:58884730-58884749 | Msa0778430:intron | 20.0% |
!! | AAAGATTAAACATTATCAAG+AGG | - | chr5_2:58885006-58885025 | None:intergenic | 20.0% |
!!! | AATCTTTCTTCTTTTATTCT+TGG | + | chr5_2:58885019-58885038 | Msa0778430:intron | 20.0% |
!!! | TTGTCGTTTTCAAATTTTAA+AGG | + | chr5_2:58885081-58885100 | Msa0778430:intron | 20.0% |
!! | TCATATCACTTAATGTTATT+TGG | + | chr5_2:58885390-58885409 | Msa0778430:intron | 20.0% |
!! | TAAAATAATCTTCTGATAGT+CGG | - | chr5_2:58885495-58885514 | None:intergenic | 20.0% |
!!! | ATATTGACAACAAGTTTTTT+AGG | - | chr5_2:58885806-58885825 | None:intergenic | 20.0% |
!!! | TATTGATAACATTGATACAA+AGG | + | chr5_2:58886152-58886171 | Msa0778430:CDS | 20.0% |
!!! | CTTTTCCATACATAATATTA+CGG | - | chr5_2:58886595-58886614 | None:intergenic | 20.0% |
!! | GGGAATATTCTATTATAAAA+GGG | - | chr5_2:58886762-58886781 | None:intergenic | 20.0% |
!! | AGGGAATATTCTATTATAAA+AGG | - | chr5_2:58886763-58886782 | None:intergenic | 20.0% |
!! | AATAAATGTGCTCTATTATT+CGG | + | chr5_2:58886872-58886891 | Msa0778430:intron | 20.0% |
!! | TAGACTATGATAAATGATAA+AGG | + | chr5_2:58887098-58887117 | Msa0778430:intron | 20.0% |
!! | TCAAGAAGAGATAATTTATT+AGG | - | chr5_2:58887487-58887506 | None:intergenic | 20.0% |
!! | AGAAAACAATAAATACCTAA+GGG | - | chr5_2:58887845-58887864 | None:intergenic | 20.0% |
!! | TAGAAAACAATAAATACCTA+AGG | - | chr5_2:58887846-58887865 | None:intergenic | 20.0% |
!! | TCTTTGCAATAAATACTTAA+GGG | - | chr5_2:58887954-58887973 | None:intergenic | 20.0% |
!!! | AATTTTGTTTGTGATAGAAA+TGG | - | chr5_2:58888090-58888109 | None:intergenic | 20.0% |
!!! | GGTATAGCATTTTAAAATAA+TGG | + | chr5_2:58888190-58888209 | Msa0778430:intron | 20.0% |
!!! | ATAGCATTTTAAAATAATGG+TGG | + | chr5_2:58888193-58888212 | Msa0778430:intron | 20.0% |
!! | TTCTTAATTGTATAAAGCAA+GGG | - | chr5_2:58889065-58889084 | None:intergenic | 20.0% |
!!! | CTAATTTTTGCATAATTAGA+AGG | + | chr5_2:58889177-58889196 | Msa0778430:intron | 20.0% |
!! | TTGTTAAAAATTAGGATAGA+GGG | - | chr5_2:58889575-58889594 | None:intergenic | 20.0% |
!! | TTTGTTAAAAATTAGGATAG+AGG | - | chr5_2:58889576-58889595 | None:intergenic | 20.0% |
!!! | GTTCACTTAATTTTGTAAAT+CGG | + | chr5_2:58889619-58889638 | Msa0778430:intron | 20.0% |
!!! | TTCACTTAATTTTGTAAATC+GGG | + | chr5_2:58889620-58889639 | Msa0778430:intron | 20.0% |
!! | AGTATATTGCTAAAGAATTA+TGG | + | chr5_2:58889943-58889962 | Msa0778430:CDS | 20.0% |
!! | ATAAAAAAAACAACTTAAGG+AGG | - | chr5_2:58890333-58890352 | None:intergenic | 20.0% |
!!! | TCCTTAAGTTGTTTTTTTTA+TGG | + | chr5_2:58890332-58890351 | Msa0778430:intron | 20.0% |
!! | ACCATAAAAAAAACAACTTA+AGG | - | chr5_2:58890336-58890355 | None:intergenic | 20.0% |
!!! | TAAAATTTGAGACTATTTTG+TGG | + | chr5_2:58890459-58890478 | Msa0778430:intron | 20.0% |
!!! | AAAATTTGAGACTATTTTGT+GGG | + | chr5_2:58890460-58890479 | Msa0778430:intron | 20.0% |
!!! | TTTTCTCTTCTTTTTTGTTT+AGG | + | chr5_2:58890698-58890717 | Msa0778430:intron | 20.0% |
!! | CAAAAGAATCAAATTTGAAA+TGG | - | chr5_2:58890746-58890765 | None:intergenic | 20.0% |
!! | TTAAATAGAAAAACTACTTG+TGG | + | chr5_2:58890870-58890889 | Msa0778430:intron | 20.0% |
!! | TAAATAGAAAAACTACTTGT+GGG | + | chr5_2:58890871-58890890 | Msa0778430:intron | 20.0% |
!!! | ATCTGATTAGTTCTAAATAT+AGG | - | chr5_2:58890902-58890921 | None:intergenic | 20.0% |
!!! | TTTTTTGTAGAGTATAAACA+AGG | - | chr5_2:58891275-58891294 | None:intergenic | 20.0% |
!! | ATATTATCTATTTATGGTAG+TGG | - | chr5_2:58891490-58891509 | None:intergenic | 20.0% |
! | ACCTTAAAAACAAACAAACA+TGG | + | chr5_2:58882348-58882367 | Msa0778430:exon | 25.0% |
!!! | TCCATGTTTGTTTGTTTTTA+AGG | - | chr5_2:58882352-58882371 | None:intergenic | 25.0% |
!!! | AAGTTAAGCATTGACAATTA+GGG | - | chr5_2:58882951-58882970 | None:intergenic | 25.0% |
!!! | TAAGTTAAGCATTGACAATT+AGG | - | chr5_2:58882952-58882971 | None:intergenic | 25.0% |
! | AAAACATCAAGGAAAATGAA+AGG | - | chr5_2:58883008-58883027 | None:intergenic | 25.0% |
! | TAGGAAACAAAGTTAAAATG+AGG | + | chr5_2:58883047-58883066 | Msa0778430:intron | 25.0% |
! | GACAAAACCATAAATGAAAA+TGG | + | chr5_2:58883250-58883269 | Msa0778430:intron | 25.0% |
! | GTAAATGTTAAGGTTCTATT+TGG | + | chr5_2:58883336-58883355 | Msa0778430:intron | 25.0% |
!! | GTTTCAATCTTTGAAAGATT+TGG | + | chr5_2:58883408-58883427 | Msa0778430:intron | 25.0% |
! | CTGAATAAATATTTGAAAGC+AGG | + | chr5_2:58883454-58883473 | Msa0778430:intron | 25.0% |
! | AAATAAAAAACTGAGTGCAT+TGG | + | chr5_2:58883740-58883759 | Msa0778430:intron | 25.0% |
! | AAATACCCTATGAAGAATAA+AGG | - | chr5_2:58884279-58884298 | None:intergenic | 25.0% |
! | TTAGAGATAATTATATAGCC+AGG | + | chr5_2:58884338-58884357 | Msa0778430:intron | 25.0% |
!!! | GGCTTTTTTATTTGAGTTAA+AGG | + | chr5_2:58884530-58884549 | Msa0778430:intron | 25.0% |
!! | TTAGTGTAGATCTATTTTAC+AGG | + | chr5_2:58884564-58884583 | Msa0778430:intron | 25.0% |
!! | TAGTGTAGATCTATTTTACA+GGG | + | chr5_2:58884565-58884584 | Msa0778430:intron | 25.0% |
! | TCAAAATGAACTTATGAAAG+TGG | + | chr5_2:58884633-58884652 | Msa0778430:intron | 25.0% |
! | CAAAATGAACTTATGAAAGT+GGG | + | chr5_2:58884634-58884653 | Msa0778430:intron | 25.0% |
! | AAGAAAAGACAGATATATCA+AGG | - | chr5_2:58884762-58884781 | None:intergenic | 25.0% |
!! | TGATATATCTGTCTTTTCTT+TGG | + | chr5_2:58884762-58884781 | Msa0778430:intron | 25.0% |
!! | TTTCTTCTTTTATTCTTGGA+TGG | + | chr5_2:58885023-58885042 | Msa0778430:intron | 25.0% |
!!! | TGTTAATCAAAGCTATTTCT+TGG | + | chr5_2:58885239-58885258 | Msa0778430:intron | 25.0% |
!!! | AATTTTTTTCTTGCAATCAG+TGG | - | chr5_2:58885348-58885367 | None:intergenic | 25.0% |
! | TCTGTGAAATATTTAAGTGT+TGG | + | chr5_2:58885586-58885605 | Msa0778430:intron | 25.0% |
!! | AACTGTTAGTTATGTTTCTA+TGG | + | chr5_2:58885683-58885702 | Msa0778430:intron | 25.0% |
! | TTATTACTTACTGTAATGCA+TGG | + | chr5_2:58885756-58885775 | Msa0778430:intron | 25.0% |
! | AAATAAGTACTTACAGTGTA+TGG | - | chr5_2:58885924-58885943 | None:intergenic | 25.0% |
! | AAATAAGGAGTTGAATTTAG+AGG | - | chr5_2:58886181-58886200 | None:intergenic | 25.0% |
! | CTTGAGAATGTAATCAAATA+AGG | - | chr5_2:58886196-58886215 | None:intergenic | 25.0% |
! | CTTGATATGTTATGTGTAAT+AGG | + | chr5_2:58886300-58886319 | Msa0778430:intron | 25.0% |
! | TACAATAAAAGAGTCATATG+AGG | - | chr5_2:58886469-58886488 | None:intergenic | 25.0% |
!! | TTAGGATGTACTTTTATACA+AGG | - | chr5_2:58886528-58886547 | None:intergenic | 25.0% |
!! | TATCAGATAATCAGAGTTTT+AGG | - | chr5_2:58886546-58886565 | None:intergenic | 25.0% |
! | CAAAACCGTAATATTATGTA+TGG | + | chr5_2:58886587-58886606 | Msa0778430:intron | 25.0% |
! | CGTAATATTATGTATGGAAA+AGG | + | chr5_2:58886593-58886612 | Msa0778430:intron | 25.0% |
! | TAGAATATTCCCTAAAATCA+AGG | + | chr5_2:58886770-58886789 | Msa0778430:intron | 25.0% |
! | TAATAGAGCACATTTATTGA+AGG | - | chr5_2:58886870-58886889 | None:intergenic | 25.0% |
!! | CGTAATAAGTTTGAAATCAA+TGG | - | chr5_2:58886968-58886987 | None:intergenic | 25.0% |
! | ATGATAAATGATAAAGGTTC+TGG | + | chr5_2:58887104-58887123 | Msa0778430:intron | 25.0% |
! | ATGAAGATTCAAAAGTCTAT+CGG | - | chr5_2:58887531-58887550 | None:intergenic | 25.0% |
!! | TCTTTTAATCTAACAAGTCA+AGG | - | chr5_2:58887610-58887629 | None:intergenic | 25.0% |
! | ATTAAGCTGTAAGTTAATTG+AGG | - | chr5_2:58887642-58887661 | None:intergenic | 25.0% |
! | AAAACAAAACAGTTCTACAA+AGG | - | chr5_2:58887880-58887899 | None:intergenic | 25.0% |
! | AAAAAATGTTGCATTCAACT+TGG | - | chr5_2:58887917-58887936 | None:intergenic | 25.0% |
! | CTCTTTGCAATAAATACTTA+AGG | - | chr5_2:58887955-58887974 | None:intergenic | 25.0% |
! | TATTTATTGCAAAGAGAGAA+AGG | + | chr5_2:58887959-58887978 | Msa0778430:intron | 25.0% |
! | ATTTATTGCAAAGAGAGAAA+GGG | + | chr5_2:58887960-58887979 | Msa0778430:intron | 25.0% |
! | AATTTAGATTAACTAGGTGA+TGG | + | chr5_2:58887996-58888015 | Msa0778430:intron | 25.0% |
!!! | TTTTGTTTTTTTCTTCCATG+GGG | - | chr5_2:58888057-58888076 | None:intergenic | 25.0% |
!!! | GTTTTGTTTTTTTCTTCCAT+GGG | - | chr5_2:58888058-58888077 | None:intergenic | 25.0% |
!!! | AGTTTTGTTTTTTTCTTCCA+TGG | - | chr5_2:58888059-58888078 | None:intergenic | 25.0% |
!!! | TGCGTTTTTTTTTCATTGAA+GGG | + | chr5_2:58888129-58888148 | Msa0778430:intron | 25.0% |
! | TACTAATAAGAGCAATACTA+AGG | - | chr5_2:58888270-58888289 | None:intergenic | 25.0% |
!! | TTTCTAAAGAAAACACAACA+GGG | - | chr5_2:58888383-58888402 | None:intergenic | 25.0% |
!!! | TTTTCTAAAGAAAACACAAC+AGG | - | chr5_2:58888384-58888403 | None:intergenic | 25.0% |
!!! | ACCTGTAGTAAATTTTGATA+TGG | + | chr5_2:58888841-58888860 | Msa0778430:CDS | 25.0% |
! | TCCATATCAAAATTTACTAC+AGG | - | chr5_2:58888845-58888864 | None:intergenic | 25.0% |
!!! | TTTTAAAAGAACCTCTGAAA+AGG | - | chr5_2:58888986-58889005 | None:intergenic | 25.0% |
!!! | GAGGTTCTTTTAAAAAATTG+AGG | + | chr5_2:58888991-58889010 | Msa0778430:intron | 25.0% |
! | TCTTAATTGTATAAAGCAAG+GGG | - | chr5_2:58889064-58889083 | None:intergenic | 25.0% |
! | GTTCTTAATTGTATAAAGCA+AGG | - | chr5_2:58889066-58889085 | None:intergenic | 25.0% |
!!! | TGAGCTTTTTCATAATATGA+TGG | - | chr5_2:58890795-58890814 | None:intergenic | 25.0% |
! | TTGTACAAAATAGTGAAAGA+GGG | + | chr5_2:58890983-58891002 | Msa0778430:intron | 25.0% |
!! | AGAAGGTTGATTATTAACTT+AGG | + | chr5_2:58891080-58891099 | Msa0778430:intron | 25.0% |
! | TTTATTTATTAAAGGGAGAG+AGG | + | chr5_2:58891171-58891190 | Msa0778430:intron | 25.0% |
! | TTATTTATTAAAGGGAGAGA+GGG | + | chr5_2:58891172-58891191 | Msa0778430:intron | 25.0% |
! | GAGTATAAACAAGGTAAAAA+CGG | - | chr5_2:58891266-58891285 | None:intergenic | 25.0% |
! | TTTAACAAAAATGGTGTGTT+TGG | - | chr5_2:58891350-58891369 | None:intergenic | 25.0% |
!!! | CACACCATTTTTGTTAAATA+TGG | + | chr5_2:58891352-58891371 | Msa0778430:intron | 25.0% |
! | GGTTCCATATTTAACAAAAA+TGG | - | chr5_2:58891359-58891378 | None:intergenic | 25.0% |
! | ACCAACAAGAAAATTTATCT+AGG | + | chr5_2:58891376-58891395 | Msa0778430:intron | 25.0% |
! | CCAACAAGAAAATTTATCTA+GGG | + | chr5_2:58891377-58891396 | Msa0778430:intron | 25.0% |
!! | TTTTCCTAATTTTATAGGGA+TGG | + | chr5_2:58891412-58891431 | Msa0778430:intron | 25.0% |
!! | TTTTCCATCCCTATAAAATT+AGG | - | chr5_2:58891419-58891438 | None:intergenic | 25.0% |
! | ATTGGATGATGTAAAAGAAA+AGG | + | chr5_2:58891578-58891597 | Msa0778430:CDS | 25.0% |
! | AGAACTATAACTATTCCAAT+TGG | + | chr5_2:58891672-58891691 | Msa0778430:three_prime_UTR | 25.0% |
! | TGTTTTTCTCTTAACTCTGT+TGG | - | chr5_2:58882325-58882344 | None:intergenic | 30.0% |
!!! | TTTTTTGCAGAAGAGGTTTA+CGG | + | chr5_2:58882538-58882557 | Msa0778430:intron | 30.0% |
AATGAAACTGCTGAATTCAA+TGG | + | chr5_2:58882576-58882595 | Msa0778430:CDS | 30.0% | |
TGGTTTATCATAACAGATCA+TGG | - | chr5_2:58882679-58882698 | None:intergenic | 30.0% | |
TAAACACTTATGAGACTACT+CGG | - | chr5_2:58882890-58882909 | None:intergenic | 30.0% | |
TTCCTATTTCGAATCTTTGA+AGG | - | chr5_2:58883033-58883052 | None:intergenic | 30.0% | |
!! | TACAAGTTTGTTTCTACCAT+CGG | - | chr5_2:58883197-58883216 | None:intergenic | 30.0% |
!!! | TGGACAAGAATTGTTTTTGT+TGG | + | chr5_2:58883428-58883447 | Msa0778430:intron | 30.0% |
TCTACGGTATTACAAATAGT+AGG | - | chr5_2:58883572-58883591 | None:intergenic | 30.0% | |
TTACAATGACAACACCAAAA+GGG | - | chr5_2:58883694-58883713 | None:intergenic | 30.0% | |
ATTACAATGACAACACCAAA+AGG | - | chr5_2:58883695-58883714 | None:intergenic | 30.0% | |
AAATTTAGTACATCTAGTGC+AGG | + | chr5_2:58883773-58883792 | Msa0778430:intron | 30.0% | |
AGTGCAGGTATTTGTATTAA+CGG | + | chr5_2:58883788-58883807 | Msa0778430:intron | 30.0% | |
GTATTAACGGTTAGTATGTT+AGG | + | chr5_2:58883801-58883820 | Msa0778430:intron | 30.0% | |
!! | TAGTATGTTAGGTGTTGAAA+TGG | + | chr5_2:58883812-58883831 | Msa0778430:intron | 30.0% |
TGAATGAGTCTACAGAAAAA+TGG | - | chr5_2:58883860-58883879 | None:intergenic | 30.0% | |
AGCACGAAAACATTTACATT+CGG | - | chr5_2:58884193-58884212 | None:intergenic | 30.0% | |
!! | AGCTGTTTTACCAAATGATT+CGG | - | chr5_2:58884217-58884236 | None:intergenic | 30.0% |
!!! | ACATCGATTCAATTTTACTG+TGG | + | chr5_2:58884467-58884486 | Msa0778430:intron | 30.0% |
!!! | CATCGATTCAATTTTACTGT+GGG | + | chr5_2:58884468-58884487 | Msa0778430:intron | 30.0% |
TTTAGACTGACATTCAATGA+TGG | - | chr5_2:58884681-58884700 | None:intergenic | 30.0% | |
! | ATTGAATGTCAGTCTAAAAC+TGG | + | chr5_2:58884683-58884702 | Msa0778430:intron | 30.0% |
!!! | ACTAGGAACATTCAGTTTTT+TGG | + | chr5_2:58884829-58884848 | Msa0778430:intron | 30.0% |
AATTTGAAAACGACAAAACC+AGG | - | chr5_2:58885077-58885096 | None:intergenic | 30.0% | |
ATGAAGAGAGAGAGAATAAA+TGG | + | chr5_2:58885172-58885191 | Msa0778430:intron | 30.0% | |
TGAAGAGAGAGAGAATAAAT+GGG | + | chr5_2:58885173-58885192 | Msa0778430:intron | 30.0% | |
AACCTTAAAGACATGTACAT+AGG | + | chr5_2:58885274-58885293 | Msa0778430:intron | 30.0% | |
TTCCTATGTACATGTCTTTA+AGG | - | chr5_2:58885279-58885298 | None:intergenic | 30.0% | |
!!! | TAAACATTTTGGCTCTCTAA+AGG | + | chr5_2:58885308-58885327 | Msa0778430:intron | 30.0% |
TTCTATGTAATAGCGTCATT+GGG | - | chr5_2:58885431-58885450 | None:intergenic | 30.0% | |
! | ACGCTATTACATAGAAGTTT+TGG | + | chr5_2:58885435-58885454 | Msa0778430:intron | 30.0% |
GCTTAAGAAAAGCAACAAAT+TGG | + | chr5_2:58885644-58885663 | Msa0778430:intron | 30.0% | |
!! | CTATGGCTTTTTAACTAACA+TGG | + | chr5_2:58885700-58885719 | Msa0778430:intron | 30.0% |
AGCAGAATTTCATAATGCAA+AGG | + | chr5_2:58885831-58885850 | Msa0778430:intron | 30.0% | |
GCATTTCTCATCAATATTTC+CGG | + | chr5_2:58886041-58886060 | Msa0778430:CDS | 30.0% | |
!! | GAGAGTTATTGTTGATGATA+AGG | - | chr5_2:58886234-58886253 | None:intergenic | 30.0% |
ATAACTCTCACTGAAATGTA+TGG | + | chr5_2:58886245-58886264 | Msa0778430:intron | 30.0% | |
GATATGTTATGTGTAATAGG+TGG | + | chr5_2:58886303-58886322 | Msa0778430:intron | 30.0% | |
TTATAAAAGGGAGTAAGTCA+TGG | - | chr5_2:58886750-58886769 | None:intergenic | 30.0% | |
TATTCCCTAAAATCAAGGAA+AGG | + | chr5_2:58886775-58886794 | Msa0778430:intron | 30.0% | |
ATTCCCTAAAATCAAGGAAA+GGG | + | chr5_2:58886776-58886795 | Msa0778430:intron | 30.0% | |
! | CTGATAGATTATAGAAGCAT+AGG | - | chr5_2:58886817-58886836 | None:intergenic | 30.0% |
TTCAAATTACTAAAGAGTGG+AGG | - | chr5_2:58886926-58886945 | None:intergenic | 30.0% | |
TGGTTCAAATTACTAAAGAG+TGG | - | chr5_2:58886929-58886948 | None:intergenic | 30.0% | |
ATGGACATTGATAAATCACA+TGG | - | chr5_2:58886949-58886968 | None:intergenic | 30.0% | |
CCAATTTCAAATCACAAGAT+AGG | - | chr5_2:58887014-58887033 | None:intergenic | 30.0% | |
! | CCTATCTTGTGATTTGAAAT+TGG | + | chr5_2:58887011-58887030 | Msa0778430:intron | 30.0% |
ATTCATCCAACAATCTCAAT+GGG | - | chr5_2:58887554-58887573 | None:intergenic | 30.0% | |
TATTCATCCAACAATCTCAA+TGG | - | chr5_2:58887555-58887574 | None:intergenic | 30.0% | |
TCAATAAACAATACTCCCTT+AGG | + | chr5_2:58887827-58887846 | Msa0778430:intron | 30.0% | |
TATCACAAACAAAATTGCGA+AGG | + | chr5_2:58888094-58888113 | Msa0778430:intron | 30.0% | |
!!! | GTGCGTTTTTTTTTCATTGA+AGG | + | chr5_2:58888128-58888147 | Msa0778430:intron | 30.0% |
!!! | GTGTTTTGTTTTTGTCAAAC+AGG | + | chr5_2:58888153-58888172 | Msa0778430:intron | 30.0% |
!!! | ATTTTAAAATAATGGTGGCG+TGG | + | chr5_2:58888198-58888217 | Msa0778430:intron | 30.0% |
! | AATGGAAGCAGTTTAACTTT+GGG | - | chr5_2:58888408-58888427 | None:intergenic | 30.0% |
! | AAATGGAAGCAGTTTAACTT+TGG | - | chr5_2:58888409-58888428 | None:intergenic | 30.0% |
AGTTAAACTGCTTCCATTTA+AGG | + | chr5_2:58888410-58888429 | Msa0778430:CDS | 30.0% | |
GTTAAACTGCTTCCATTTAA+GGG | + | chr5_2:58888411-58888430 | Msa0778430:CDS | 30.0% | |
AACAGTCACAAAATAGATAG+CGG | - | chr5_2:58888513-58888532 | None:intergenic | 30.0% | |
! | ACAAGCCTAAGTGTAATTTT+CGG | + | chr5_2:58888613-58888632 | Msa0778430:intron | 30.0% |
AATGTCCGAAAATTACACTT+AGG | - | chr5_2:58888621-58888640 | None:intergenic | 30.0% | |
TTATGATAACAAATGCGCAA+TGG | - | chr5_2:58888653-58888672 | None:intergenic | 30.0% | |
ATCATAACATTTAGTCGCAT+TGG | + | chr5_2:58888666-58888685 | Msa0778430:intron | 30.0% | |
! | TGATATCTTAACCTTTTCAG+AGG | + | chr5_2:58888972-58888991 | Msa0778430:intron | 30.0% |
TACTTGTGTCTCAAAATTGT+TGG | - | chr5_2:58889096-58889115 | None:intergenic | 30.0% | |
! | GTGAGGTTTGAAATTTGAAA+GGG | - | chr5_2:58889134-58889153 | None:intergenic | 30.0% |
ATTTGCGAGGATTAAGAAAT+TGG | + | chr5_2:58889253-58889272 | Msa0778430:intron | 30.0% | |
TATCATAACTCATAAGACCT+CGG | - | chr5_2:58889489-58889508 | None:intergenic | 30.0% | |
AAAACCATAGTTAAGTCTAC+TGG | + | chr5_2:58889594-58889613 | Msa0778430:intron | 30.0% | |
GATAGACCATACAAAAAACA+TGG | + | chr5_2:58889728-58889747 | Msa0778430:intron | 30.0% | |
!!! | TTTGGTCCATGTTTTTTGTA+TGG | - | chr5_2:58889737-58889756 | None:intergenic | 30.0% |
ATTGCTAAAGAATTATGGCA+TGG | + | chr5_2:58889948-58889967 | Msa0778430:CDS | 30.0% | |
TTAATGAATTGATGCTTGTG+AGG | + | chr5_2:58890027-58890046 | Msa0778430:CDS | 30.0% | |
! | AATATTGCTGATGGTTTTTG+TGG | - | chr5_2:58890192-58890211 | None:intergenic | 30.0% |
!! | AAAAGCACTAATATTGCTGA+TGG | - | chr5_2:58890201-58890220 | None:intergenic | 30.0% |
!!! | TCTCTTCTTTTTTGTTTAGG+TGG | + | chr5_2:58890701-58890720 | Msa0778430:intron | 30.0% |
!!! | CTCTTCTTTTTTGTTTAGGT+GGG | + | chr5_2:58890702-58890721 | Msa0778430:intron | 30.0% |
! | ATCAAATTTGAAATGGATGC+CGG | - | chr5_2:58890739-58890758 | None:intergenic | 30.0% |
!!! | GATTCTTTTGAAATTCAACG+AGG | + | chr5_2:58890756-58890775 | Msa0778430:CDS | 30.0% |
!! | AATTTGGTGTGAATAGTCAA+AGG | + | chr5_2:58890957-58890976 | Msa0778430:intron | 30.0% |
GTTGTACAAAATAGTGAAAG+AGG | + | chr5_2:58890982-58891001 | Msa0778430:intron | 30.0% | |
TGTACAAAATAGTGAAAGAG+GGG | + | chr5_2:58890984-58891003 | Msa0778430:intron | 30.0% | |
ATCACTTATTGTGCAAAAGA+AGG | + | chr5_2:58891063-58891082 | Msa0778430:intron | 30.0% | |
ATGGAGGCTAAATCTTATAA+AGG | + | chr5_2:58891144-58891163 | Msa0778430:intron | 30.0% | |
AACGGTATAAAAATACAGTG+TGG | - | chr5_2:58891248-58891267 | None:intergenic | 30.0% | |
! | CCCTAGATAAATTTTCTTGT+TGG | - | chr5_2:58891380-58891399 | None:intergenic | 30.0% |
ATCTATTTGTCTGCTCTATT+AGG | + | chr5_2:58891533-58891552 | Msa0778430:intron | 30.0% | |
AAACAAGCTGAAAATGACTT+TGG | + | chr5_2:58891636-58891655 | Msa0778430:CDS | 30.0% | |
ACTATAACTATTCCAATTGG+TGG | + | chr5_2:58891675-58891694 | Msa0778430:three_prime_UTR | 30.0% | |
!!! | AGCAAATGTTTGGTTTTGGT+TGG | + | chr5_2:58882376-58882395 | Msa0778430:CDS | 35.0% |
!!! | AAATGTTTGGTTTTGGTTGG+AGG | + | chr5_2:58882379-58882398 | Msa0778430:CDS | 35.0% |
!!! | TGACTGACTTTTGAGTTTGA+AGG | - | chr5_2:58882450-58882469 | None:intergenic | 35.0% |
AAACACTTATGAGACTACTC+GGG | - | chr5_2:58882889-58882908 | None:intergenic | 35.0% | |
! | CTTTGAAGGTGAAAACATCA+AGG | - | chr5_2:58883019-58883038 | None:intergenic | 35.0% |
CACCTTCAAAGATTCGAAAT+AGG | + | chr5_2:58883028-58883047 | Msa0778430:intron | 35.0% | |
TCACATGTGCACTATAGAAT+TGG | - | chr5_2:58883098-58883117 | None:intergenic | 35.0% | |
TCATACCTCATTTGATCCAA+TGG | - | chr5_2:58883160-58883179 | None:intergenic | 35.0% | |
GGTAGAAACAAACTTGTACA+CGG | + | chr5_2:58883199-58883218 | Msa0778430:intron | 35.0% | |
TCTAATGTGCATAGGTAAGT+TGG | - | chr5_2:58883232-58883251 | None:intergenic | 35.0% | |
!!! | TGGTTTTGTCTAATGTGCAT+AGG | - | chr5_2:58883240-58883259 | None:intergenic | 35.0% |
GAGCTCCTTTATTCTTCATA+GGG | + | chr5_2:58884271-58884290 | Msa0778430:intron | 35.0% | |
GATAATTATATAGCCAGGCT+TGG | + | chr5_2:58884343-58884362 | Msa0778430:intron | 35.0% | |
!! | TACTTTTTGTCCCATCATCT+TGG | + | chr5_2:58884424-58884443 | Msa0778430:intron | 35.0% |
! | GCAAAGTAGTGAACTTTTAC+TGG | - | chr5_2:58884595-58884614 | None:intergenic | 35.0% |
TTGAATTTGATCGCATGAAG+TGG | - | chr5_2:58884617-58884636 | None:intergenic | 35.0% | |
TTATGAAAGTGGGATGATGT+GGG | + | chr5_2:58884644-58884663 | Msa0778430:intron | 35.0% | |
! | GATGGCTTTTATGTTCTTTG+TGG | + | chr5_2:58885041-58885060 | Msa0778430:intron | 35.0% |
! | AACAGAGGGAGTAAACATTT+TGG | + | chr5_2:58885297-58885316 | Msa0778430:intron | 35.0% |
CTTCTATGTAATAGCGTCAT+TGG | - | chr5_2:58885432-58885451 | None:intergenic | 35.0% | |
!!! | ATAGAAGTTTTGGCTCTGTA+TGG | + | chr5_2:58885445-58885464 | Msa0778430:intron | 35.0% |
AATAATCTTCTGATAGTCGG+TGG | - | chr5_2:58885492-58885511 | None:intergenic | 35.0% | |
!! | ATTTTGACCTTTTGCCAAGT+TGG | + | chr5_2:58885555-58885574 | Msa0778430:intron | 35.0% |
ACTGTAATGCATGGCATTAT+AGG | + | chr5_2:58885765-58885784 | Msa0778430:intron | 35.0% | |
TTGATGAGAAATGCTCCTTA+AGG | - | chr5_2:58886035-58886054 | None:intergenic | 35.0% | |
CAATGTTATCAATACAGTCG+AGG | - | chr5_2:58886146-58886165 | None:intergenic | 35.0% | |
ATGGAAAAGGTTGAGCAAAA+AGG | + | chr5_2:58886606-58886625 | Msa0778430:intron | 35.0% | |
AAGATAAACCAGAGTGTGAA+CGG | + | chr5_2:58886658-58886677 | Msa0778430:intron | 35.0% | |
GGAGAAATGTTGTAAGAAGT+TGG | - | chr5_2:58886729-58886748 | None:intergenic | 35.0% | |
! | TAGCCCTTTCCTTGATTTTA+GGG | - | chr5_2:58886782-58886801 | None:intergenic | 35.0% |
! | TTAGCCCTTTCCTTGATTTT+AGG | - | chr5_2:58886783-58886802 | None:intergenic | 35.0% |
AATTACTAAAGAGTGGAGGA+TGG | - | chr5_2:58886922-58886941 | None:intergenic | 35.0% | |
! | CTTGTGATTTGAAATTGGTC+TGG | + | chr5_2:58887016-58887035 | Msa0778430:intron | 35.0% |
! | ACCTTTTTAACCTTCCTCTT+AGG | + | chr5_2:58887053-58887072 | Msa0778430:intron | 35.0% |
TTAGGCACGTATTATTGGAT+TGG | + | chr5_2:58887071-58887090 | Msa0778430:intron | 35.0% | |
! | AAATGATAAAGGTTCTGGTC+TGG | + | chr5_2:58887109-58887128 | Msa0778430:intron | 35.0% |
AGAATAGGCAGTTAGATTCA+TGG | - | chr5_2:58887320-58887339 | None:intergenic | 35.0% | |
AAATATGGCAGTTCCATTCA+AGG | - | chr5_2:58887352-58887371 | None:intergenic | 35.0% | |
CTTACAGCTTAATTCTTGTC+TGG | + | chr5_2:58887649-58887668 | Msa0778430:intron | 35.0% | |
AAGAAGTGAACAACTGAAAG+AGG | + | chr5_2:58887677-58887696 | Msa0778430:intron | 35.0% | |
! | TTTTGTCAAACAGGCAGAAT+TGG | + | chr5_2:58888162-58888181 | Msa0778430:intron | 35.0% |
TTGAACACTCTTTCACTCAT+TGG | - | chr5_2:58888225-58888244 | None:intergenic | 35.0% | |
AAATCACCTGATAGTCTGAA+GGG | - | chr5_2:58888458-58888477 | None:intergenic | 35.0% | |
!! | AGGCTTGTTTGATTGTGTTT+TGG | - | chr5_2:58888601-58888620 | None:intergenic | 35.0% |
! | TCAGATTGTTCCAGGTTTTA+GGG | + | chr5_2:58888718-58888737 | Msa0778430:intron | 35.0% |
! | TGACTTGTCCAAATATTGCA+GGG | - | chr5_2:58888772-58888791 | None:intergenic | 35.0% |
! | ATGACTTGTCCAAATATTGC+AGG | - | chr5_2:58888773-58888792 | None:intergenic | 35.0% |
TGCAATATTTGGACAAGTCA+TGG | + | chr5_2:58888772-58888791 | Msa0778430:CDS | 35.0% | |
TGCTAAATCCGTCAAAACAT+AGG | - | chr5_2:58888801-58888820 | None:intergenic | 35.0% | |
!!! | TATGTTTTGACGGATTTAGC+AGG | + | chr5_2:58888800-58888819 | Msa0778430:CDS | 35.0% |
!! | TAAGGCGTTGATGAAGAATA+TGG | - | chr5_2:58888874-58888893 | None:intergenic | 35.0% |
TGTGTCTCAAAATTGTTGGA+AGG | - | chr5_2:58889092-58889111 | None:intergenic | 35.0% | |
! | GGTGAGGTTTGAAATTTGAA+AGG | - | chr5_2:58889135-58889154 | None:intergenic | 35.0% |
!! | ATTAGTTTGTCTCCTGTGAT+GGG | - | chr5_2:58889162-58889181 | None:intergenic | 35.0% |
!! | AATTAGTTTGTCTCCTGTGA+TGG | - | chr5_2:58889163-58889182 | None:intergenic | 35.0% |
AGCCTAAATATTTGTATCCG+AGG | + | chr5_2:58889469-58889488 | Msa0778430:intron | 35.0% | |
GACCTCGGATACAAATATTT+AGG | - | chr5_2:58889474-58889493 | None:intergenic | 35.0% | |
! | TACTACCTTAGGGCATATTT+TGG | - | chr5_2:58889755-58889774 | None:intergenic | 35.0% |
ACAAAGAGACTACTACCTTA+GGG | - | chr5_2:58889765-58889784 | None:intergenic | 35.0% | |
TACAAAGAGACTACTACCTT+AGG | - | chr5_2:58889766-58889785 | None:intergenic | 35.0% | |
AATTGATGCTTGTGAGGTAT+GGG | + | chr5_2:58890033-58890052 | Msa0778430:intron | 35.0% | |
ATGAAGTAGCTTGATGTCAA+TGG | - | chr5_2:58890228-58890247 | None:intergenic | 35.0% | |
! | ACAGATAAAGATGCTTTGGA+AGG | - | chr5_2:58890285-58890304 | None:intergenic | 35.0% |
AGTGACAGATAAAGATGCTT+TGG | - | chr5_2:58890289-58890308 | None:intergenic | 35.0% | |
!! | GCATCTTTATCTGTCACTTT+AGG | + | chr5_2:58890291-58890310 | Msa0778430:intron | 35.0% |
GCTAACACATATGCTAATGT+AGG | - | chr5_2:58890625-58890644 | None:intergenic | 35.0% | |
GTTTCTCGATCTCTTTCATT+TGG | + | chr5_2:58890653-58890672 | Msa0778430:intron | 35.0% | |
!! | GACCTTTTGAAGAACTAACA+TGG | + | chr5_2:58891125-58891144 | Msa0778430:intron | 35.0% |
! | CTCCATGTTAGTTCTTCAAA+AGG | - | chr5_2:58891130-58891149 | None:intergenic | 35.0% |
!! | CTTTTGAAGAACTAACATGG+AGG | + | chr5_2:58891128-58891147 | Msa0778430:intron | 35.0% |
GGTATAAAAATACAGTGTGG+AGG | - | chr5_2:58891245-58891264 | None:intergenic | 35.0% | |
!! | ATCTATTTATGGTAGTGGAG+TGG | - | chr5_2:58891485-58891504 | None:intergenic | 35.0% |
TATTTGTCTGCTCTATTAGG+TGG | + | chr5_2:58891536-58891555 | Msa0778430:intron | 35.0% | |
ATCACTCTACTGTAAAACTC+TGG | - | chr5_2:58891606-58891625 | None:intergenic | 35.0% | |
TGTAGTGTTGCATGTCTAAT+AGG | + | chr5_2:58891698-58891717 | Msa0778430:three_prime_UTR | 35.0% | |
!! | TGTGGTTGTGTAATGGGTTT+CGG | - | chr5_2:58882270-58882289 | None:intergenic | 40.0% |
! | GTGGTTTGTGGTTGTGTAAT+GGG | - | chr5_2:58882276-58882295 | None:intergenic | 40.0% |
!! | GCGAAGCAAATGTTTGGTTT+TGG | + | chr5_2:58882372-58882391 | Msa0778430:CDS | 40.0% |
GAGCTTGAGAAGAAAGAAAG+TGG | - | chr5_2:58882428-58882447 | None:intergenic | 40.0% | |
CTATAGTGCACATGTGAGAT+AGG | + | chr5_2:58883101-58883120 | Msa0778430:intron | 40.0% | |
GCTTGTTTCAACCATTCCAT+TGG | + | chr5_2:58883141-58883160 | Msa0778430:intron | 40.0% | |
CCTCATTTGATCCAATGGAA+TGG | - | chr5_2:58883155-58883174 | None:intergenic | 40.0% | |
CCATTCCATTGGATCAAATG+AGG | + | chr5_2:58883152-58883171 | Msa0778430:intron | 40.0% | |
GATGTGACTTATTGATCCGA+TGG | + | chr5_2:58883178-58883197 | Msa0778430:intron | 40.0% | |
AATACCGTAGAGTGAATCCT+AGG | + | chr5_2:58883581-58883600 | Msa0778430:intron | 40.0% | |
ATACCGTAGAGTGAATCCTA+GGG | + | chr5_2:58883582-58883601 | Msa0778430:intron | 40.0% | |
GGTTCGCTGCATTATCAATT+CGG | - | chr5_2:58883673-58883692 | None:intergenic | 40.0% | |
! | AAAAAACTGAGTGCATTGGC+TGG | + | chr5_2:58883744-58883763 | Msa0778430:intron | 40.0% |
!! | TTTATGGCGTGAGAGTACTT+AGG | - | chr5_2:58883991-58884010 | None:intergenic | 40.0% |
! | TTCTGTTTTGTGTCTCCTAC+AGG | + | chr5_2:58884022-58884041 | Msa0778430:intron | 40.0% |
ACTATAGCTGGAAAGAAGAG+TGG | + | chr5_2:58884058-58884077 | Msa0778430:CDS | 40.0% | |
!! | TTGTTTCTGAACAGCTGACT+AGG | + | chr5_2:58884116-58884135 | Msa0778430:CDS | 40.0% |
TCATTTGGTAAAACAGCTCC+AGG | + | chr5_2:58884219-58884238 | Msa0778430:intron | 40.0% | |
TGAAGAATAAAGGAGCTCGT+GGG | - | chr5_2:58884269-58884288 | None:intergenic | 40.0% | |
ATGAAGAATAAAGGAGCTCG+TGG | - | chr5_2:58884270-58884289 | None:intergenic | 40.0% | |
CGAGCTCCTTTATTCTTCAT+AGG | + | chr5_2:58884270-58884289 | Msa0778430:intron | 40.0% | |
CCTTGGATATCCAAGATGAT+GGG | - | chr5_2:58884437-58884456 | None:intergenic | 40.0% | |
CCATCATCTTGGATATCCAA+GGG | + | chr5_2:58884435-58884454 | Msa0778430:intron | 40.0% | |
TCGATGTGATAACATTCCCT+TGG | - | chr5_2:58884454-58884473 | None:intergenic | 40.0% | |
CTTATGAAAGTGGGATGATG+TGG | + | chr5_2:58884643-58884662 | Msa0778430:intron | 40.0% | |
!! | GTGTTGTTTCTGCTGTAACT+AGG | + | chr5_2:58884812-58884831 | Msa0778430:intron | 40.0% |
!! | TGGCTTTGAATCACAACAGA+AGG | + | chr5_2:58884849-58884868 | Msa0778430:CDS | 40.0% |
GCATCATATGTTGTGGTCAT+TGG | + | chr5_2:58884877-58884896 | Msa0778430:CDS | 40.0% | |
! | TATGTTGTGGTCATTGGTCT+TGG | + | chr5_2:58884883-58884902 | Msa0778430:CDS | 40.0% |
CTTCTATGCTCTTGAGATCA+GGG | + | chr5_2:58884926-58884945 | Msa0778430:CDS | 40.0% | |
GATTGGAAAGCTTCTTCTTG+TGG | + | chr5_2:58884948-58884967 | Msa0778430:CDS | 40.0% | |
TCTTCTTGTGGACTTTGATC+AGG | + | chr5_2:58884960-58884979 | Msa0778430:CDS | 40.0% | |
AGAGAGAATAAATGGGTGAG+TGG | + | chr5_2:58885180-58885199 | Msa0778430:intron | 40.0% | |
TAAATGGGTGAGTGGATCAA+TGG | + | chr5_2:58885188-58885207 | Msa0778430:intron | 40.0% | |
AGTGGATCAATGGAAACGTA+AGG | + | chr5_2:58885198-58885217 | Msa0778430:intron | 40.0% | |
GTGGATCAATGGAAACGTAA+GGG | + | chr5_2:58885199-58885218 | Msa0778430:intron | 40.0% | |
AGACATGTACATAGGAACAG+AGG | + | chr5_2:58885282-58885301 | Msa0778430:intron | 40.0% | |
GACATGTACATAGGAACAGA+GGG | + | chr5_2:58885283-58885302 | Msa0778430:intron | 40.0% | |
! | ATTTCCGGAGTGTCAAATAG+AGG | + | chr5_2:58886056-58886075 | Msa0778430:CDS | 40.0% |
TTTGCCTCTATTTGACACTC+CGG | - | chr5_2:58886063-58886082 | None:intergenic | 40.0% | |
ACCGAAGAAGAAATTCTCTC+AGG | + | chr5_2:58886105-58886124 | Msa0778430:CDS | 40.0% | |
GCCTGAGAGAATTTCTTCTT+CGG | - | chr5_2:58886109-58886128 | None:intergenic | 40.0% | |
AATACAGTCGAGGACAAAGT+CGG | - | chr5_2:58886136-58886155 | None:intergenic | 40.0% | |
TAACGATCCATTGTCTCGAT+CGG | + | chr5_2:58886435-58886454 | Msa0778430:CDS | 40.0% | |
AACATTACCGATCGAGACAA+TGG | - | chr5_2:58886445-58886464 | None:intergenic | 40.0% | |
GAGCAAAAAGGCTCTACAAA+TGG | + | chr5_2:58886618-58886637 | Msa0778430:intron | 40.0% | |
CAAAAAGGCTCTACAAATGG+TGG | + | chr5_2:58886621-58886640 | Msa0778430:intron | 40.0% | |
AAGAGAGTTTCTCTGTGGTT+AGG | - | chr5_2:58886704-58886723 | None:intergenic | 40.0% | |
TGGTAAAGAGAGTTTCTCTG+TGG | - | chr5_2:58886709-58886728 | None:intergenic | 40.0% | |
AAGGAATCAAGAGAACACCT+GGG | - | chr5_2:58886851-58886870 | None:intergenic | 40.0% | |
GCCTAAGAGGAAGGTTAAAA+AGG | - | chr5_2:58887057-58887076 | None:intergenic | 40.0% | |
ATAATACGTGCCTAAGAGGA+AGG | - | chr5_2:58887066-58887085 | None:intergenic | 40.0% | |
TCCTCTTAGGCACGTATTAT+TGG | + | chr5_2:58887066-58887085 | Msa0778430:intron | 40.0% | |
TCCAATAATACGTGCCTAAG+AGG | - | chr5_2:58887070-58887089 | None:intergenic | 40.0% | |
TGAGAGGCTTCTTAAACTTG+TGG | - | chr5_2:58887287-58887306 | None:intergenic | 40.0% | |
TCATGGTTGTCAAACTTGAG+AGG | - | chr5_2:58887303-58887322 | None:intergenic | 40.0% | |
TCAAGGTTGTAAGCGAGAAT+AGG | - | chr5_2:58887335-58887354 | None:intergenic | 40.0% | |
TTCTCGCTTACAACCTTGAA+TGG | + | chr5_2:58887336-58887355 | Msa0778430:intron | 40.0% | |
TGCCATATTTCTCGAGTCTA+TGG | + | chr5_2:58887362-58887381 | Msa0778430:intron | 40.0% | |
CATATTTCTCGAGTCTATGG+CGG | + | chr5_2:58887365-58887384 | Msa0778430:intron | 40.0% | |
GTGATGAGAAATACGAACCA+GGG | - | chr5_2:58887457-58887476 | None:intergenic | 40.0% | |
CTTCATCCCATTGAGATTGT+TGG | + | chr5_2:58887545-58887564 | Msa0778430:intron | 40.0% | |
GTTGGATGAATATTCTCGCA+TGG | + | chr5_2:58887563-58887582 | Msa0778430:intron | 40.0% | |
!!! | TGTTTTTTTCTTCCATGGGG+TGG | - | chr5_2:58888054-58888073 | None:intergenic | 40.0% |
! | AAACAGGCAGAATTGGTAAC+TGG | + | chr5_2:58888169-58888188 | Msa0778430:intron | 40.0% |
TCATACCTAATTACCGATGC+AGG | + | chr5_2:58888314-58888333 | Msa0778430:intron | 40.0% | |
! | TCTTACCTGCATCGGTAATT+AGG | - | chr5_2:58888322-58888341 | None:intergenic | 40.0% |
TGCCATGATCTTTCCTTAGA+CGG | - | chr5_2:58888347-58888366 | None:intergenic | 40.0% | |
! | AGGAAAGATCATGGCATTGA+TGG | + | chr5_2:58888351-58888370 | Msa0778430:CDS | 40.0% |
!! | AAAGATCATGGCATTGATGG+TGG | + | chr5_2:58888354-58888373 | Msa0778430:CDS | 40.0% |
GAAATCACCTGATAGTCTGA+AGG | - | chr5_2:58888459-58888478 | None:intergenic | 40.0% | |
! | TCCTTTTGTCAGATTGTTCC+AGG | + | chr5_2:58888710-58888729 | Msa0778430:intron | 40.0% |
ACCTGGAACAATCTGACAAA+AGG | - | chr5_2:58888714-58888733 | None:intergenic | 40.0% | |
! | GTCAGATTGTTCCAGGTTTT+AGG | + | chr5_2:58888717-58888736 | Msa0778430:intron | 40.0% |
TGCCTAGAACAGGTATGATA+CGG | - | chr5_2:58888745-58888764 | None:intergenic | 40.0% | |
TTGTCCAAATATTGCAGGGA+TGG | - | chr5_2:58888768-58888787 | None:intergenic | 40.0% | |
!! | CATGGCTTCCTATGTTTTGA+CGG | + | chr5_2:58888790-58888809 | Msa0778430:CDS | 40.0% |
ATGTCTCCTCATGCTCAATA+AGG | - | chr5_2:58888892-58888911 | None:intergenic | 40.0% | |
TAGTTATACCTGCACATGCA+TGG | - | chr5_2:58888927-58888946 | None:intergenic | 40.0% | |
ACACACTACTTGTATTTGCG+AGG | + | chr5_2:58889240-58889259 | Msa0778430:intron | 40.0% | |
TTTAGGCTACTCGTGATCAT+GGG | - | chr5_2:58889457-58889476 | None:intergenic | 40.0% | |
ATTTAGGCTACTCGTGATCA+TGG | - | chr5_2:58889458-58889477 | None:intergenic | 40.0% | |
ACTGCCAGTAGACTTAACTA+TGG | - | chr5_2:58889601-58889620 | None:intergenic | 40.0% | |
ATGGACCAAAATATGCCCTA+AGG | + | chr5_2:58889747-58889766 | Msa0778430:intron | 40.0% | |
GAATTGATGCTTGTGAGGTA+TGG | + | chr5_2:58890032-58890051 | Msa0778430:intron | 40.0% | |
ATTGATGCTTGTGAGGTATG+GGG | + | chr5_2:58890034-58890053 | Msa0778430:intron | 40.0% | |
TGACATCAAGCTACTTCATC+TGG | + | chr5_2:58890229-58890248 | Msa0778430:intron | 40.0% | |
!! | AATCTCATGATGCTTGCTGT+TGG | + | chr5_2:58890520-58890539 | Msa0778430:intron | 40.0% |
TCTGCTATGTTGTCTCAACT+CGG | + | chr5_2:58890588-58890607 | Msa0778430:intron | 40.0% | |
!! | ATGGTAGTGGAGTGGAAAAA+AGG | - | chr5_2:58891477-58891496 | None:intergenic | 40.0% |
!! | GTGGTTGTGTAATGGGTTTC+GGG | - | chr5_2:58882269-58882288 | None:intergenic | 45.0% |
! | GGTGGTTTGTGGTTGTGTAA+TGG | - | chr5_2:58882277-58882296 | None:intergenic | 45.0% |
! | TAACTCTGTTGGCCTGACAT+CGG | - | chr5_2:58882314-58882333 | None:intergenic | 45.0% |
CATGGAGCGAAGCAAATGTT+TGG | + | chr5_2:58882366-58882385 | Msa0778430:exon | 45.0% | |
!!! | TGTTTGGTTTTGGTTGGAGG+TGG | + | chr5_2:58882382-58882401 | Msa0778430:CDS | 45.0% |
TTTGCAGAAGAGGTTTACGG+CGG | + | chr5_2:58882541-58882560 | Msa0778430:intron | 45.0% | |
GGTTGAAACAAGCTTGTGCA+TGG | - | chr5_2:58883134-58883153 | None:intergenic | 45.0% | |
CATCCCTAGGATTCACTCTA+CGG | - | chr5_2:58883588-58883607 | None:intergenic | 45.0% | |
GTAGAGTGAATCCTAGGGAT+GGG | + | chr5_2:58883587-58883606 | Msa0778430:intron | 45.0% | |
! | GATAATGCAGCGAACCCTTT+TGG | + | chr5_2:58883677-58883696 | Msa0778430:intron | 45.0% |
GTTGACAGATGCACTATAGC+TGG | + | chr5_2:58884046-58884065 | Msa0778430:CDS | 45.0% | |
AGCTGGAAAGAAGAGTGGTA+AGG | + | chr5_2:58884063-58884082 | Msa0778430:CDS | 45.0% | |
TTTCGTGCTGCCGAATCATT+TGG | + | chr5_2:58884204-58884223 | Msa0778430:intron | 45.0% | |
GAAATGAGATTGCACGTTCC+TGG | - | chr5_2:58884240-58884259 | None:intergenic | 45.0% | |
TGGCATGTTTAGGCTGAACA+TGG | + | chr5_2:58884363-58884382 | Msa0778430:intron | 45.0% | |
CCCATCATCTTGGATATCCA+AGG | + | chr5_2:58884434-58884453 | Msa0778430:intron | 45.0% | |
CCCTTGGATATCCAAGATGA+TGG | - | chr5_2:58884438-58884457 | None:intergenic | 45.0% | |
GGTGAGTGCATCATATGTTG+TGG | + | chr5_2:58884870-58884889 | Msa0778430:CDS | 45.0% | |
!! | TTGTGGTCATTGGTCTTGGA+GGG | + | chr5_2:58884887-58884906 | Msa0778430:CDS | 45.0% |
GCTTCTATGCTCTTGAGATC+AGG | + | chr5_2:58884925-58884944 | Msa0778430:CDS | 45.0% | |
ATGCTCTTGAGATCAGGGAT+TGG | + | chr5_2:58884931-58884950 | Msa0778430:CDS | 45.0% | |
! | CTTTGTGGATTTTTCCTGCC+TGG | + | chr5_2:58885056-58885075 | Msa0778430:intron | 45.0% |
TGAAAACGACAAAACCAGGC+AGG | - | chr5_2:58885073-58885092 | None:intergenic | 45.0% | |
TTTCCAGCCAACTTGGCAAA+AGG | - | chr5_2:58885565-58885584 | None:intergenic | 45.0% | |
CACAGAATTTCCAGCCAACT+TGG | - | chr5_2:58885572-58885591 | None:intergenic | 45.0% | |
CTCAAAAGCTCAGTGCCTTA+AGG | + | chr5_2:58886017-58886036 | Msa0778430:CDS | 45.0% | |
ATACAGTCGAGGACAAAGTC+GGG | - | chr5_2:58886135-58886154 | None:intergenic | 45.0% | |
TTCTTGCTGCATGTGTACGT+AGG | + | chr5_2:58886329-58886348 | Msa0778430:CDS | 45.0% | |
TCTTGCTGCATGTGTACGTA+GGG | + | chr5_2:58886330-58886349 | Msa0778430:CDS | 45.0% | |
TTGAAGGTTCTATCTGCCAC+TGG | + | chr5_2:58886355-58886374 | Msa0778430:CDS | 45.0% | |
TGAAGGTTCTATCTGCCACT+GGG | + | chr5_2:58886356-58886375 | Msa0778430:CDS | 45.0% | |
AGGAGTCGAGAGAAGAGATA+TGG | - | chr5_2:58886508-58886527 | None:intergenic | 45.0% | |
GAAGGAATCAAGAGAACACC+TGG | - | chr5_2:58886852-58886871 | None:intergenic | 45.0% | |
ACTAAAGAGTGGAGGATGGT+GGG | - | chr5_2:58886918-58886937 | None:intergenic | 45.0% | |
TACTAAAGAGTGGAGGATGG+TGG | - | chr5_2:58886919-58886938 | None:intergenic | 45.0% | |
CGCCATAGACTCGAGAAATA+TGG | - | chr5_2:58887367-58887386 | None:intergenic | 45.0% | |
CGTGATGAGAAATACGAACC+AGG | - | chr5_2:58887458-58887477 | None:intergenic | 45.0% | |
AAACATATCCATCCACCCCA+TGG | + | chr5_2:58888039-58888058 | Msa0778430:intron | 45.0% | |
! | TTTTTCTTCCATGGGGTGGA+TGG | - | chr5_2:58888050-58888069 | None:intergenic | 45.0% |
CACCGTCTAAGGAAAGATCA+TGG | + | chr5_2:58888342-58888361 | Msa0778430:CDS | 45.0% | |
CTTCCATTTAAGGGTCCAAG+TGG | + | chr5_2:58888420-58888439 | Msa0778430:CDS | 45.0% | |
TCTCCACTTGGACCCTTAAA+TGG | - | chr5_2:58888426-58888445 | None:intergenic | 45.0% | |
GGAAAACCCTTCAGACTATC+AGG | + | chr5_2:58888449-58888468 | Msa0778430:CDS | 45.0% | |
ATGATACGGACCCTAAAACC+TGG | - | chr5_2:58888731-58888750 | None:intergenic | 45.0% | |
GTCCGTATCATACCTGTTCT+AGG | + | chr5_2:58888740-58888759 | Msa0778430:CDS | 45.0% | |
! | TCAACGCCTTATTGAGCATG+AGG | + | chr5_2:58888883-58888902 | Msa0778430:CDS | 45.0% |
GAGCATGAGGAGACATTGTA+CGG | + | chr5_2:58888896-58888915 | Msa0778430:CDS | 45.0% | |
AGCAAGGGGTAATGTGCAAT+TGG | - | chr5_2:58889050-58889069 | None:intergenic | 45.0% | |
!!! | TTGTCTCCTGTGATGGGTTT+TGG | - | chr5_2:58889156-58889175 | None:intergenic | 45.0% |
CTCGTGATCATGGGGAAAAT+TGG | - | chr5_2:58889448-58889467 | None:intergenic | 45.0% | |
TTAGGCTACTCGTGATCATG+GGG | - | chr5_2:58889456-58889475 | None:intergenic | 45.0% | |
ATTAGAGTGACACGTCTGCA+TGG | + | chr5_2:58889652-58889671 | Msa0778430:intron | 45.0% | |
AGGTTGCAAAAGACGTTGGA+CGG | + | chr5_2:58889988-58890007 | Msa0778430:CDS | 45.0% | |
TGCAACACTACACCACCAAT+TGG | - | chr5_2:58891690-58891709 | None:intergenic | 45.0% | |
!!! | TTTTTATATAAATTTTTTGT+TGG | + | chr5_2:58889805-58889824 | Msa0778430:intron | 5.0% |
! | CTGTCTTGTTCGGTGGTTTG+TGG | - | chr5_2:58882288-58882307 | None:intergenic | 50.0% |
! | ACATCGGAGGCTGTCTTGTT+CGG | - | chr5_2:58882298-58882317 | None:intergenic | 50.0% |
! | GTTGGAGGTGGTGCTCTTTT+AGG | + | chr5_2:58882394-58882413 | Msa0778430:CDS | 50.0% |
CGTAGAGTGAATCCTAGGGA+TGG | + | chr5_2:58883586-58883605 | Msa0778430:intron | 50.0% | |
CTAAAGCTCCTGCATACGCA+GGG | - | chr5_2:58883626-58883645 | None:intergenic | 50.0% | |
ACTAAAGCTCCTGCATACGC+AGG | - | chr5_2:58883627-58883646 | None:intergenic | 50.0% | |
CGGATTAAAAAAGGGCAGCC+TGG | - | chr5_2:58883653-58883672 | None:intergenic | 50.0% | |
GTGCATCTGTCAACACCTGT+AGG | - | chr5_2:58884040-58884059 | None:intergenic | 50.0% | |
TAGCCAGGCTTGGCATGTTT+AGG | + | chr5_2:58884353-58884372 | Msa0778430:intron | 50.0% | |
!! | GTTGTGGTCATTGGTCTTGG+AGG | + | chr5_2:58884886-58884905 | Msa0778430:CDS | 50.0% |
!! | TGTGGTCATTGGTCTTGGAG+GGG | + | chr5_2:58884888-58884907 | Msa0778430:CDS | 50.0% |
!! | TGACCTTTTGCCAAGTTGGC+TGG | + | chr5_2:58885559-58885578 | Msa0778430:intron | 50.0% |
GTTGCGACAAGAGCAGATGT+TGG | + | chr5_2:58885991-58886010 | Msa0778430:CDS | 50.0% | |
TACAGTCGAGGACAAAGTCG+GGG | - | chr5_2:58886134-58886153 | None:intergenic | 50.0% | |
CTTGCTGCATGTGTACGTAG+GGG | + | chr5_2:58886331-58886350 | Msa0778430:CDS | 50.0% | |
ATGTGTACGTAGGGGCTTGA+AGG | + | chr5_2:58886339-58886358 | Msa0778430:CDS | 50.0% | |
GAAGGTTCTATCTGCCACTG+GGG | + | chr5_2:58886357-58886376 | Msa0778430:CDS | 50.0% | |
TCAGCGATGCGTATTCTCGT+TGG | - | chr5_2:58886400-58886419 | None:intergenic | 50.0% | |
!! | TAGGAGCATTGTGCTCTGGT+AGG | - | chr5_2:58886685-58886704 | None:intergenic | 50.0% |
!! | TGGTTAGGAGCATTGTGCTC+TGG | - | chr5_2:58886689-58886708 | None:intergenic | 50.0% |
ATCAAGAGAACACCTGGGCA+AGG | - | chr5_2:58886846-58886865 | None:intergenic | 50.0% | |
TCGAGTCTATGGCGGTTTGA+CGG | + | chr5_2:58887373-58887392 | Msa0778430:intron | 50.0% | |
AGACGGTGTCTTACCTGCAT+CGG | - | chr5_2:58888330-58888349 | None:intergenic | 50.0% | |
TGCAGGTAAGACACCGTCTA+AGG | + | chr5_2:58888331-58888350 | Msa0778430:intron | 50.0% | |
TAAGGGTCCAAGTGGAGAAG+AGG | + | chr5_2:58888428-58888447 | Msa0778430:CDS | 50.0% | |
! | GGGTTTTCCTCTTCTCCACT+TGG | - | chr5_2:58888438-58888457 | None:intergenic | 50.0% |
GGCACCATCCCTGCAATATT+TGG | + | chr5_2:58888761-58888780 | Msa0778430:CDS | 50.0% | |
ACCTCACCAAAACCCATCAC+AGG | + | chr5_2:58889147-58889166 | Msa0778430:intron | 50.0% | |
!!! | TCCTGTGATGGGTTTTGGTG+AGG | - | chr5_2:58889151-58889170 | None:intergenic | 50.0% |
AGTGACACGTCTGCATGGTA+TGG | + | chr5_2:58889657-58889676 | Msa0778430:intron | 50.0% | |
!! | TATGGCATGGAAGAAGTGCC+AGG | + | chr5_2:58889961-58889980 | Msa0778430:CDS | 50.0% |
!! | ATGGCATGGAAGAAGTGCCA+GGG | + | chr5_2:58889962-58889981 | Msa0778430:CDS | 50.0% |
GAGCAGGTTGCAAAAGACGT+TGG | + | chr5_2:58889984-58890003 | Msa0778430:CDS | 50.0% | |
GGTTGCAAAAGACGTTGGAC+GGG | + | chr5_2:58889989-58890008 | Msa0778430:CDS | 50.0% | |
TAGGTGGGACAGTACGAAAC+CGG | + | chr5_2:58890717-58890736 | Msa0778430:intron | 50.0% | |
AGGTGGATGAGCATGAGTCA+CGG | + | chr5_2:58891553-58891572 | Msa0778430:intron | 50.0% | |
TGAGCATGAGTCACGGACAT+TGG | + | chr5_2:58891560-58891579 | Msa0778430:CDS | 50.0% | |
GGTCAGGTCATACAGCAGTC+GGG | - | chr5_2:58882232-58882251 | None:intergenic | 55.0% | |
GGGTCAGGTCATACAGCAGT+CGG | - | chr5_2:58882233-58882252 | None:intergenic | 55.0% | |
! | TTTCGGGTAGCACAGCAGTC+GGG | - | chr5_2:58882253-58882272 | None:intergenic | 55.0% |
! | GTTTCGGGTAGCACAGCAGT+CGG | - | chr5_2:58882254-58882273 | None:intergenic | 55.0% |
ACAAGACAGCCTCCGATGTC+AGG | + | chr5_2:58882299-58882318 | Msa0778430:five_prime_UTR | 55.0% | |
! | TGCAGGAGCTTTAGTGCTCC+AGG | + | chr5_2:58883632-58883651 | Msa0778430:intron | 55.0% |
CAGCCTAAACATGCCAAGCC+TGG | - | chr5_2:58884359-58884378 | None:intergenic | 55.0% | |
!! | GTCATTGGTCTTGGAGGGGT+TGG | + | chr5_2:58884892-58884911 | Msa0778430:CDS | 55.0% |
TGGTAGGACCGTTCACACTC+TGG | - | chr5_2:58886669-58886688 | None:intergenic | 55.0% | |
TATCAGATCGTGCCTTGCCC+AGG | + | chr5_2:58886831-58886850 | Msa0778430:intron | 55.0% | |
CGAGTCTATGGCGGTTTGAC+GGG | + | chr5_2:58887374-58887393 | Msa0778430:intron | 55.0% | |
GGCATCTTGCATACATGCCC+TGG | + | chr5_2:58887437-58887456 | Msa0778430:intron | 55.0% | |
CGGAACTTCCATGCATGTGC+AGG | + | chr5_2:58888916-58888935 | Msa0778430:CDS | 55.0% | |
! | GTCTTTTGCAACCTGCTCCC+TGG | - | chr5_2:58889982-58890001 | None:intergenic | 55.0% |
AAGACGTTGGACGGGCAATG+TGG | + | chr5_2:58889997-58890016 | Msa0778430:CDS | 55.0% | |
! | TCGGAGGCTGTCTTGTTCGG+TGG | - | chr5_2:58882295-58882314 | None:intergenic | 60.0% |
! | CTCTGTTGGCCTGACATCGG+AGG | - | chr5_2:58882311-58882330 | None:intergenic | 60.0% |
AGTCGAGGACAAAGTCGGGG+TGG | - | chr5_2:58886131-58886150 | None:intergenic | 60.0% | |
GTTCTATCTGCCACTGGGGC+TGG | + | chr5_2:58886361-58886380 | Msa0778430:CDS | 60.0% | |
!! | GAGTGGAGGATGGTGGGACT+GGG | - | chr5_2:58886912-58886931 | None:intergenic | 60.0% |
!! | AGAGTGGAGGATGGTGGGAC+TGG | - | chr5_2:58886913-58886932 | None:intergenic | 60.0% |
GCAGGGATGGTGCCTAGAAC+AGG | - | chr5_2:58888755-58888774 | None:intergenic | 60.0% | |
!! | TGGAAGAAGTGCCAGGGAGC+AGG | + | chr5_2:58889968-58889987 | Msa0778430:CDS | 60.0% |
GGTAGCACAGCAGTCGGGTC+AGG | - | chr5_2:58882248-58882267 | None:intergenic | 65.0% | |
CTAGGGATGGGACCCCTTCC+CGG | + | chr5_2:58883599-58883618 | Msa0778430:intron | 65.0% | |
CATACGCAGGGTCCGGGAAG+GGG | - | chr5_2:58883614-58883633 | None:intergenic | 65.0% | |
GCATACGCAGGGTCCGGGAA+GGG | - | chr5_2:58883615-58883634 | None:intergenic | 65.0% | |
TGCATACGCAGGGTCCGGGA+AGG | - | chr5_2:58883616-58883635 | None:intergenic | 65.0% | |
TTCCCGGACCCTGCGTATGC+AGG | + | chr5_2:58883615-58883634 | Msa0778430:intron | 65.0% | |
CTCCTGCATACGCAGGGTCC+GGG | - | chr5_2:58883620-58883639 | None:intergenic | 65.0% | |
GCTCCTGCATACGCAGGGTC+CGG | - | chr5_2:58883621-58883640 | None:intergenic | 65.0% | |
! | AGCTCTAGCACCAGCCCCAG+TGG | - | chr5_2:58886374-58886393 | None:intergenic | 65.0% |
CGGGAAGGGGTCCCATCCCT+AGG | - | chr5_2:58883601-58883620 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_2 | gene | 58882229 | 58891840 | 58882229 | ID=Msa0778430;Name=Msa0778430 |
chr5_2 | mRNA | 58882229 | 58891840 | 58882229 | ID=Msa0778430-mRNA-1;Parent=Msa0778430;Name=Msa0778430-mRNA-1;_AED=0.03;_eAED=0.03;_QI=138|1|1|1|1|1|11|175|459 |
chr5_2 | exon | 58882229 | 58882461 | 58882229 | ID=Msa0778430-mRNA-1:exon:17332;Parent=Msa0778430-mRNA-1 |
chr5_2 | exon | 58882548 | 58882597 | 58882548 | ID=Msa0778430-mRNA-1:exon:17333;Parent=Msa0778430-mRNA-1 |
chr5_2 | exon | 58884044 | 58884137 | 58884044 | ID=Msa0778430-mRNA-1:exon:17334;Parent=Msa0778430-mRNA-1 |
chr5_2 | exon | 58884834 | 58884981 | 58884834 | ID=Msa0778430-mRNA-1:exon:17335;Parent=Msa0778430-mRNA-1 |
chr5_2 | exon | 58885961 | 58886173 | 58885961 | ID=Msa0778430-mRNA-1:exon:17336;Parent=Msa0778430-mRNA-1 |
chr5_2 | exon | 58886322 | 58886456 | 58886322 | ID=Msa0778430-mRNA-1:exon:17337;Parent=Msa0778430-mRNA-1 |
chr5_2 | exon | 58888336 | 58888470 | 58888336 | ID=Msa0778430-mRNA-1:exon:17338;Parent=Msa0778430-mRNA-1 |
chr5_2 | exon | 58888722 | 58888937 | 58888722 | ID=Msa0778430-mRNA-1:exon:17339;Parent=Msa0778430-mRNA-1 |
chr5_2 | exon | 58889924 | 58890048 | 58889924 | ID=Msa0778430-mRNA-1:exon:17340;Parent=Msa0778430-mRNA-1 |
chr5_2 | exon | 58890720 | 58890777 | 58890720 | ID=Msa0778430-mRNA-1:exon:17341;Parent=Msa0778430-mRNA-1 |
chr5_2 | exon | 58891555 | 58891840 | 58891555 | ID=Msa0778430-mRNA-1:exon:17342;Parent=Msa0778430-mRNA-1 |
chr5_2 | five_prime_UTR | 58882229 | 58882366 | 58882229 | ID=Msa0778430-mRNA-1:five_prime_utr;Parent=Msa0778430-mRNA-1 |
chr5_2 | CDS | 58882367 | 58882461 | 58882367 | ID=Msa0778430-mRNA-1:cds;Parent=Msa0778430-mRNA-1 |
chr5_2 | CDS | 58882548 | 58882597 | 58882548 | ID=Msa0778430-mRNA-1:cds;Parent=Msa0778430-mRNA-1 |
chr5_2 | CDS | 58884044 | 58884137 | 58884044 | ID=Msa0778430-mRNA-1:cds;Parent=Msa0778430-mRNA-1 |
chr5_2 | CDS | 58884834 | 58884981 | 58884834 | ID=Msa0778430-mRNA-1:cds;Parent=Msa0778430-mRNA-1 |
chr5_2 | CDS | 58885961 | 58886173 | 58885961 | ID=Msa0778430-mRNA-1:cds;Parent=Msa0778430-mRNA-1 |
chr5_2 | CDS | 58886322 | 58886456 | 58886322 | ID=Msa0778430-mRNA-1:cds;Parent=Msa0778430-mRNA-1 |
chr5_2 | CDS | 58888336 | 58888470 | 58888336 | ID=Msa0778430-mRNA-1:cds;Parent=Msa0778430-mRNA-1 |
chr5_2 | CDS | 58888722 | 58888937 | 58888722 | ID=Msa0778430-mRNA-1:cds;Parent=Msa0778430-mRNA-1 |
chr5_2 | CDS | 58889924 | 58890048 | 58889924 | ID=Msa0778430-mRNA-1:cds;Parent=Msa0778430-mRNA-1 |
chr5_2 | CDS | 58890720 | 58890777 | 58890720 | ID=Msa0778430-mRNA-1:cds;Parent=Msa0778430-mRNA-1 |
chr5_2 | CDS | 58891555 | 58891665 | 58891555 | ID=Msa0778430-mRNA-1:cds;Parent=Msa0778430-mRNA-1 |
chr5_2 | three_prime_UTR | 58891666 | 58891840 | 58891666 | ID=Msa0778430-mRNA-1:three_prime_utr;Parent=Msa0778430-mRNA-1 |
Gene Sequence |
Protein sequence |