Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0780170 | sp|Q9SZ15|LIP5_ARATH | 49.098 | 499 | 154 | 14 | 4 | 487 | 5 | 418 | 2.47e-119 | 359 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0780170 | G7K8Q1 | 96.926 | 488 | 14 | 1 | 1 | 488 | 1 | 487 | 0.0 | 939 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0743130 | Msa0780170 | 0.853947 | 1.705776e-61 | -8.615850e-47 |
| Msa0780170 | Msa0863280 | 0.895615 | 8.102469e-76 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0780170 | MtrunA17_Chr5g0444891 | 96.926 | 488 | 14 | 1 | 1 | 488 | 1 | 487 | 0.0 | 939 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0780170 | AT4G26750.1 | 49.098 | 499 | 154 | 14 | 4 | 487 | 5 | 418 | 2.51e-120 | 359 |
Find 166 sgRNAs with CRISPR-Local
Find 251 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTGCCTCTGCTATTCTTTC+AGG | 0.134746 | 5_2:-61883407 | None:intergenic |
| TTCTGCTGCTGGAACTGTTT+TGG | 0.177816 | 5_2:-61883316 | None:intergenic |
| TTTGAGATTCTTAATCAATT+TGG | 0.204458 | 5_2:+61882157 | Msa0780170:CDS |
| AACTTGGATAAGATTGAAAA+TGG | 0.218480 | 5_2:-61883181 | None:intergenic |
| TGTTTATTCCTGCAGGATAT+TGG | 0.237590 | 5_2:+61882579 | Msa0780170:intron |
| TTAAGAGTGTCGTTGAATTT+AGG | 0.245833 | 5_2:-61882705 | None:intergenic |
| GAGTTGTTGGCTTGGGTTCC+GGG | 0.246329 | 5_2:-61883349 | None:intergenic |
| TTATTGTTTATAGGATAAAA+AGG | 0.254607 | 5_2:+61881652 | Msa0780170:intron |
| GGAGTTGTTGGCTTGGGTTC+CGG | 0.263293 | 5_2:-61883350 | None:intergenic |
| TGATAATAAGTGTGGTTTAC+TGG | 0.267283 | 5_2:-61883230 | None:intergenic |
| GTGGAGGAGGATGGTATTCT+TGG | 0.285105 | 5_2:-61882902 | None:intergenic |
| GTGGAGGAGGATGGTATTCT+TGG | 0.285105 | 5_2:-61882929 | None:intergenic |
| CATCTTTGCAGTTTCATGAT+AGG | 0.285900 | 5_2:+61882754 | Msa0780170:CDS |
| AAGAAGAGCATTGGTAGTTT+TGG | 0.293479 | 5_2:-61880591 | None:intergenic |
| GAAACTTCTGCTTCTGGTGC+TGG | 0.302418 | 5_2:+61882609 | Msa0780170:CDS |
| GTTTATTCCTGCAGGATATT+GGG | 0.307438 | 5_2:+61882580 | Msa0780170:intron |
| GTTTCGTGAGAAGGGTAATT+AGG | 0.308078 | 5_2:-61883137 | None:intergenic |
| GGATTTGCTTTGAATGTGTT+TGG | 0.322140 | 5_2:+61881713 | Msa0780170:CDS |
| TGAGTATTGTTGGTGGTTGT+AGG | 0.322811 | 5_2:-61883090 | None:intergenic |
| CAAGATCAGTCACAGAATTT+AGG | 0.329866 | 5_2:+61883113 | Msa0780170:CDS |
| GAGATTGGTGTCTTTGTAAA+GGG | 0.332111 | 5_2:+61883671 | Msa0780170:three_prime_UTR |
| GAGGAATGCTTGGCAGATTC+TGG | 0.332427 | 5_2:-61882677 | None:intergenic |
| GTAATCTTGGGATGGTGGAG+GGG | 0.340744 | 5_2:-61883024 | None:intergenic |
| GTGGAGGAGGATGGTAATCC+TGG | 0.345422 | 5_2:-61882983 | None:intergenic |
| TACTGGTATGTCGGAGTTGT+TGG | 0.354417 | 5_2:-61883362 | None:intergenic |
| GCTAGCAGCGTAAAATGTTT+TGG | 0.359188 | 5_2:-61882128 | None:intergenic |
| GTGAAGGAGGATGGTAATCC+TGG | 0.365061 | 5_2:-61882875 | None:intergenic |
| TAATCTTGGGATGGTGGAGG+GGG | 0.367428 | 5_2:-61883023 | None:intergenic |
| ACTTGGATAAGATTGAAAAT+GGG | 0.376597 | 5_2:-61883180 | None:intergenic |
| TAAGAACTGTCTGATCTTGC+AGG | 0.381758 | 5_2:-61883059 | None:intergenic |
| GTGGAGGCTGATGGTAATCT+TGG | 0.383288 | 5_2:-61883037 | None:intergenic |
| TGAAAATGGGGAAGAGAGTA+AGG | 0.385158 | 5_2:-61883167 | None:intergenic |
| TGGTAATCTTGGGATGGTGG+AGG | 0.385786 | 5_2:-61883026 | None:intergenic |
| GGCAGATTCTGGTAGTTGAC+AGG | 0.387519 | 5_2:-61882666 | None:intergenic |
| ATGGCGGAGGATGGTAATCT+TGG | 0.389781 | 5_2:-61882956 | None:intergenic |
| ATGGAGGAAGATGGTAGTCT+TGG | 0.399221 | 5_2:-61882848 | None:intergenic |
| AAGATTTGCTGTTGGGGCAC+TGG | 0.399437 | 5_2:+61883439 | Msa0780170:CDS |
| CCTGTGGCTGGCCCACCTGC+TGG | 0.403221 | 5_2:+61882415 | Msa0780170:CDS |
| ACTGATCTTGTGAGTATTGT+TGG | 0.408641 | 5_2:-61883100 | None:intergenic |
| ACTACTGAAACTTCTGCTTC+TGG | 0.414352 | 5_2:+61882603 | Msa0780170:CDS |
| AAGCTGCAAGATTTGCTGTT+GGG | 0.416451 | 5_2:+61883432 | Msa0780170:CDS |
| GGTAATCTTGGGATGGTGGA+GGG | 0.421779 | 5_2:-61883025 | None:intergenic |
| GAAGATAATTTATATCTTGA+GGG | 0.424873 | 5_2:+61881692 | Msa0780170:CDS |
| ATCTTTGCAGTTTCATGATA+GGG | 0.431940 | 5_2:+61882755 | Msa0780170:CDS |
| ATGATAACTATGTGTTGAAT+CGG | 0.432222 | 5_2:-61882640 | None:intergenic |
| TCATCGGCGCGTTGAAGGTA+TGG | 0.436007 | 5_2:-61880392 | None:intergenic |
| GAGTATTGTTGGTGGTTGTA+GGG | 0.438226 | 5_2:-61883089 | None:intergenic |
| GATTTGCTTTGAATGTGTTT+GGG | 0.440793 | 5_2:+61881714 | Msa0780170:CDS |
| TCTCATGAAACAGCTTGAAA+AGG | 0.442260 | 5_2:+61880619 | Msa0780170:CDS |
| AATCATACATATATATTACT+AGG | 0.444945 | 5_2:-61882469 | None:intergenic |
| ATAAGAAAGGCTTTGAAAGA+AGG | 0.446815 | 5_2:+61882385 | Msa0780170:CDS |
| GAGAGCTCGGCAGAGCGGAC+AGG | 0.449022 | 5_2:-61882447 | None:intergenic |
| CGCTGGTTCGTTCTCCGCCA+TGG | 0.449805 | 5_2:-61880357 | None:intergenic |
| CTATTCTTTCAGGTGGAGGC+TGG | 0.456145 | 5_2:-61883397 | None:intergenic |
| TGAGATTGGTGTCTTTGTAA+AGG | 0.457402 | 5_2:+61883670 | Msa0780170:three_prime_UTR |
| CTTGAGAAGGTGGAGGAGGA+TGG | 0.462748 | 5_2:-61882992 | None:intergenic |
| AACAGTTCCAGCAGCAGAAA+AGG | 0.463781 | 5_2:+61883320 | Msa0780170:CDS |
| TCAAGATATAAATTATCTTC+AGG | 0.464007 | 5_2:-61881689 | None:intergenic |
| CGTTTATATGCGATGGAAAG+AGG | 0.465990 | 5_2:+61880542 | Msa0780170:CDS |
| GCAATTCATCGGCGCGTTGA+AGG | 0.466290 | 5_2:-61880397 | None:intergenic |
| AGAAACAGAAATATGCAGTA+TGG | 0.466421 | 5_2:+61882350 | Msa0780170:CDS |
| CTTGGGAAGGTGGAGGAGGA+TGG | 0.470573 | 5_2:-61882911 | None:intergenic |
| CTTGGGAAGGTGGAGGAGGA+TGG | 0.470573 | 5_2:-61882938 | None:intergenic |
| GGATGGTAATCCTGGGAAGA+TGG | 0.470666 | 5_2:-61882867 | None:intergenic |
| CTATCATGAAACTGCAAAGA+TGG | 0.476651 | 5_2:-61882753 | None:intergenic |
| TTCGTGTTTCTGCAATTCAT+CGG | 0.479969 | 5_2:-61880408 | None:intergenic |
| AGGCTGCTTTCTGTAAAACT+TGG | 0.480094 | 5_2:-61883197 | None:intergenic |
| AATTAATATAGAATTGAGAT+TGG | 0.481610 | 5_2:+61883656 | Msa0780170:three_prime_UTR |
| AATGAATGGTTTGTAGTCAA+AGG | 0.483160 | 5_2:-61883287 | None:intergenic |
| GGATGGTATTCTTGGGAAGG+TGG | 0.483390 | 5_2:-61882921 | None:intergenic |
| TGGAGGAAGATGGTAGTCTT+GGG | 0.486188 | 5_2:-61882847 | None:intergenic |
| TAATCTTGGGAAGGTGGAGG+AGG | 0.487363 | 5_2:-61882942 | None:intergenic |
| CTTGGGAAGGTGAAGGAGGA+TGG | 0.488808 | 5_2:-61882884 | None:intergenic |
| TATGTCGGAGTTGTTGGCTT+GGG | 0.489287 | 5_2:-61883356 | None:intergenic |
| TGAAGATAATTTATATCTTG+AGG | 0.489442 | 5_2:+61881691 | Msa0780170:CDS |
| CCATCCTCCGCCATCTTCCC+AGG | 0.489477 | 5_2:+61882965 | Msa0780170:CDS |
| TATTCTTGGGAAGGTGGAGG+AGG | 0.490689 | 5_2:-61882915 | None:intergenic |
| TAATCTTGAGAAGGTGGAGG+AGG | 0.493863 | 5_2:-61882996 | None:intergenic |
| TATGGTAACAAAGGCTTCGC+TGG | 0.495318 | 5_2:-61880374 | None:intergenic |
| AAACTTCTGCTTCTGGTGCT+GGG | 0.497466 | 5_2:+61882610 | Msa0780170:CDS |
| GGTGTATAAGAGTGAGATGA+TGG | 0.497876 | 5_2:-61882810 | None:intergenic |
| TCTGCTATTCTTTCAGGTGG+AGG | 0.499453 | 5_2:-61883401 | None:intergenic |
| GCTGGTAACTACTGTCATAC+TGG | 0.499902 | 5_2:-61883379 | None:intergenic |
| CCAGCAGGTGGGCCAGCCAC+AGG | 0.500659 | 5_2:-61882415 | None:intergenic |
| GTATGTCGGAGTTGTTGGCT+TGG | 0.500827 | 5_2:-61883357 | None:intergenic |
| TTAGGTGCAGGAGGAATGCT+TGG | 0.501005 | 5_2:-61882687 | None:intergenic |
| AAATCTTACTGGCCAACTGA+TGG | 0.501251 | 5_2:-61883524 | None:intergenic |
| TTGTAGTCAAAGGAGCTGAC+TGG | 0.501804 | 5_2:-61883277 | None:intergenic |
| GGATGGTAATCCTGGGAAGA+TGG | 0.502963 | 5_2:-61882975 | None:intergenic |
| TGGGAAGAATATGAAGCATC+GGG | 0.505824 | 5_2:-61883257 | None:intergenic |
| TCTCCGCCATGGAAAATTCT+CGG | 0.508445 | 5_2:-61880346 | None:intergenic |
| TTTAGGTCGTTTATATGCGA+TGG | 0.510248 | 5_2:+61880535 | Msa0780170:intron |
| TGGAGGAGGATGGTATTCTT+GGG | 0.510443 | 5_2:-61882901 | None:intergenic |
| TGGAGGAGGATGGTATTCTT+GGG | 0.510443 | 5_2:-61882928 | None:intergenic |
| TGGCGGAGGATGGTAATCTT+GGG | 0.517941 | 5_2:-61882955 | None:intergenic |
| CCATCTTCCTCCATCTTCCC+AGG | 0.519168 | 5_2:+61882857 | Msa0780170:CDS |
| GAGAGAAACAAGAAGAGCAT+TGG | 0.519492 | 5_2:-61880600 | None:intergenic |
| GCCTCTGCTATTCTTTCAGG+TGG | 0.521868 | 5_2:-61883404 | None:intergenic |
| GAAGGAAGGAAGCCTGTGGC+TGG | 0.522191 | 5_2:+61882403 | Msa0780170:CDS |
| AAAGCTGCAAGATTTGCTGT+TGG | 0.523329 | 5_2:+61883431 | Msa0780170:CDS |
| GACAGGTCCTCGTCACCAGC+AGG | 0.523402 | 5_2:-61882430 | None:intergenic |
| CTTGGATAAGATTGAAAATG+GGG | 0.523875 | 5_2:-61883179 | None:intergenic |
| CTGTCTGATCTTGCAGGTGG+AGG | 0.526101 | 5_2:-61883053 | None:intergenic |
| AGGTCCTCGTCACCAGCAGG+TGG | 0.527025 | 5_2:-61882427 | None:intergenic |
| AAAATTGGTACTGGTATGAA+TGG | 0.527893 | 5_2:+61883553 | Msa0780170:three_prime_UTR |
| ATGCGATGGAAAGAGGATTG+AGG | 0.529928 | 5_2:+61880549 | Msa0780170:CDS |
| AATCTTACTGGCCAACTGAT+GGG | 0.529939 | 5_2:-61883523 | None:intergenic |
| TGGTATTCTTGGGAAGGTGG+AGG | 0.531288 | 5_2:-61882918 | None:intergenic |
| TGGTAATCTTGGGAAGGTGG+AGG | 0.531288 | 5_2:-61882945 | None:intergenic |
| GAAAGGCTTTGAAAGAAGGA+AGG | 0.532058 | 5_2:+61882389 | Msa0780170:CDS |
| AATGGGGAAGAGAGTAAGGA+GGG | 0.535585 | 5_2:-61883163 | None:intergenic |
| GAAAGCAGCTGATATAAGAA+AGG | 0.537489 | 5_2:+61882372 | Msa0780170:CDS |
| TGTAGTCAAAGGAGCTGACT+GGG | 0.538243 | 5_2:-61883276 | None:intergenic |
| CTGGGAAGAATATGAAGCAT+CGG | 0.541818 | 5_2:-61883258 | None:intergenic |
| TGGAGGCTGATGGTAATCTT+GGG | 0.542772 | 5_2:-61883036 | None:intergenic |
| GTAAACCACACTTATTATCA+AGG | 0.542813 | 5_2:+61883233 | Msa0780170:CDS |
| GTGTCGTTGAATTTAGGTGC+AGG | 0.546530 | 5_2:-61882699 | None:intergenic |
| GATCTTGTGAGTATTGTTGG+TGG | 0.547197 | 5_2:-61883097 | None:intergenic |
| GCAGACAAGCAAGATCGTGC+TGG | 0.548143 | 5_2:+61881740 | Msa0780170:CDS |
| TGGTATTCTTGGGAAGGTGA+AGG | 0.548593 | 5_2:-61882891 | None:intergenic |
| GGCTGATGGTAATCTTGGGA+TGG | 0.550328 | 5_2:-61883032 | None:intergenic |
| TGGGGAAGAGAGTAAGGAGG+GGG | 0.550544 | 5_2:-61883161 | None:intergenic |
| GGATGGTAATCTTGGGAAGG+TGG | 0.559838 | 5_2:-61882948 | None:intergenic |
| AGTATTGTTGGTGGTTGTAG+GGG | 0.560541 | 5_2:-61883088 | None:intergenic |
| AGCTGCAAGATTTGCTGTTG+GGG | 0.561218 | 5_2:+61883433 | Msa0780170:CDS |
| TTGCTAACAAACCCATCAGT+TGG | 0.561547 | 5_2:+61883512 | Msa0780170:CDS |
| AGATTGGTGTCTTTGTAAAG+GGG | 0.561839 | 5_2:+61883672 | Msa0780170:three_prime_UTR |
| TGGCCCACCTGCTGGTGACG+AGG | 0.563390 | 5_2:+61882423 | Msa0780170:CDS |
| CCTGGGAAGATGGAGGAAGA+TGG | 0.564186 | 5_2:-61882857 | None:intergenic |
| CCTGGGAAGATGGCGGAGGA+TGG | 0.567339 | 5_2:-61882965 | None:intergenic |
| GCAGATTCTGGTAGTTGACA+GGG | 0.573055 | 5_2:-61882665 | None:intergenic |
| TACAGAAAGCAGCCTACCAT+CGG | 0.580464 | 5_2:+61883205 | Msa0780170:CDS |
| TATTCTTGGGAAGGTGAAGG+AGG | 0.581609 | 5_2:-61882888 | None:intergenic |
| GGAGGATGGTATTCTTGGGA+AGG | 0.584118 | 5_2:-61882924 | None:intergenic |
| GGAAGATGGTAGTCTTGGGA+AGG | 0.585665 | 5_2:-61882843 | None:intergenic |
| GGTTGATAATCTTGAGAAGG+TGG | 0.586451 | 5_2:-61883002 | None:intergenic |
| CTACTGTCATACTGGTATGT+CGG | 0.586527 | 5_2:-61883371 | None:intergenic |
| CAGCAGAAAAGGTACTGTCC+CGG | 0.588967 | 5_2:+61883331 | Msa0780170:CDS |
| TCATGAAACTGCAAAGATGG+TGG | 0.589439 | 5_2:-61882750 | None:intergenic |
| TCTTGGGAAGGATAAACTCC+AGG | 0.591333 | 5_2:-61882831 | None:intergenic |
| GGAGGATGGTATTCTTGGGA+AGG | 0.591554 | 5_2:-61882897 | None:intergenic |
| TGATGGTAATCTTGGGATGG+TGG | 0.592478 | 5_2:-61883029 | None:intergenic |
| TATATATTACTAGGAGAGCT+CGG | 0.600017 | 5_2:-61882460 | None:intergenic |
| GGTTTACTGGTACCGATGGT+AGG | 0.602355 | 5_2:-61883217 | None:intergenic |
| TCATCTCACTCTTATACACC+TGG | 0.602585 | 5_2:+61882813 | Msa0780170:CDS |
| GTGTGGTTTACTGGTACCGA+TGG | 0.605810 | 5_2:-61883221 | None:intergenic |
| TGATAATCTTGAGAAGGTGG+AGG | 0.608409 | 5_2:-61882999 | None:intergenic |
| CGGGACCTTGATAATAAGTG+TGG | 0.610947 | 5_2:-61883238 | None:intergenic |
| TGAAGGAGGATGGTAATCCT+GGG | 0.611980 | 5_2:-61882874 | None:intergenic |
| ATCTTGCAGGTGGAGGCTGA+TGG | 0.612435 | 5_2:-61883046 | None:intergenic |
| CGTTGAAGGTATGGTAACAA+AGG | 0.615442 | 5_2:-61880383 | None:intergenic |
| TGGAGGAGGATGGTAATCCT+GGG | 0.619455 | 5_2:-61882982 | None:intergenic |
| TGGTAATCCTGGGAAGATGG+CGG | 0.626991 | 5_2:-61882972 | None:intergenic |
| AAATGGGGAAGAGAGTAAGG+AGG | 0.630859 | 5_2:-61883164 | None:intergenic |
| ATGGGGAAGAGAGTAAGGAG+GGG | 0.633348 | 5_2:-61883162 | None:intergenic |
| TAATCCTGGGAAGATGGCGG+AGG | 0.637109 | 5_2:-61882969 | None:intergenic |
| TCGTTGAATTTAGGTGCAGG+AGG | 0.645300 | 5_2:-61882696 | None:intergenic |
| GAACTGTCTGATCTTGCAGG+TGG | 0.649066 | 5_2:-61883056 | None:intergenic |
| TGGTAATCCTGGGAAGATGG+AGG | 0.655008 | 5_2:-61882864 | None:intergenic |
| TCCACCTGAAAGAATAGCAG+AGG | 0.659264 | 5_2:+61883403 | Msa0780170:CDS |
| GGTCCTCGTCACCAGCAGGT+GGG | 0.661611 | 5_2:-61882426 | None:intergenic |
| GTGAGATGATGGAGAAACAA+CGG | 0.665021 | 5_2:-61882799 | None:intergenic |
| GGAGGATGGTAATCTTGGGA+AGG | 0.668348 | 5_2:-61882951 | None:intergenic |
| GAAAGAAGGAAGGAAGCCTG+TGG | 0.681972 | 5_2:+61882399 | Msa0780170:CDS |
| TTACAGTAATAAGCAACGAG+AGG | 0.703762 | 5_2:-61880431 | None:intergenic |
| ACTAGGAGAGCTCGGCAGAG+CGG | 0.722295 | 5_2:-61882452 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATATAATTAATATAATT+AGG | - | chr5_2:61880508-61880527 | None:intergenic | 0.0% |
| !!! | TTAATATAATTAGGTTATTT+TGG | - | chr5_2:61880499-61880518 | None:intergenic | 10.0% |
| !!! | ATTATATTTTTTGTGAATTT+AGG | + | chr5_2:61880518-61880537 | Msa0780170:intron | 10.0% |
| !!! | ATAATTTTATAAACATATTG+AGG | - | chr5_2:61881625-61881644 | None:intergenic | 10.0% |
| !! | TGTAAATAATAGTAAATTGA+AGG | - | chr5_2:61881432-61881451 | None:intergenic | 15.0% |
| !! | TTATTGTTTATAGGATAAAA+AGG | + | chr5_2:61881652-61881671 | Msa0780170:intron | 15.0% |
| !! | TATTGTTTATAGGATAAAAA+GGG | + | chr5_2:61881653-61881672 | Msa0780170:intron | 15.0% |
| !! | TAAAAATACAATTACACAAA+AGG | - | chr5_2:61882300-61882319 | None:intergenic | 15.0% |
| !! | AATCATACATATATATTACT+AGG | - | chr5_2:61882472-61882491 | None:intergenic | 15.0% |
| !! | AATTAATATAGAATTGAGAT+TGG | + | chr5_2:61883656-61883675 | Msa0780170:three_prime_UTR | 15.0% |
| !! | TGAATGAAAATTGAATTCAT+TGG | + | chr5_2:61880947-61880966 | Msa0780170:intron | 20.0% |
| !! | AAAATTTCGTATAGTTAGAT+AGG | + | chr5_2:61881019-61881038 | Msa0780170:intron | 20.0% |
| !! | ATCGTTGTATTATTGTTTAT+AGG | + | chr5_2:61881643-61881662 | Msa0780170:intron | 20.0% |
| !! | TCAAGATATAAATTATCTTC+AGG | - | chr5_2:61881692-61881711 | None:intergenic | 20.0% |
| !! | TGAAGATAATTTATATCTTG+AGG | + | chr5_2:61881691-61881710 | Msa0780170:CDS | 20.0% |
| !! | GAAGATAATTTATATCTTGA+GGG | + | chr5_2:61881692-61881711 | Msa0780170:CDS | 20.0% |
| !!! | TTTGAGATTCTTAATCAATT+TGG | + | chr5_2:61882157-61882176 | Msa0780170:CDS | 20.0% |
| !!! | ATTTTTACACAAAATCTTAC+TGG | - | chr5_2:61883538-61883557 | None:intergenic | 20.0% |
| !!! | GTAAGATTTTGTGTAAAAAT+TGG | + | chr5_2:61883538-61883557 | Msa0780170:exon | 20.0% |
| !!! | TAGCTTTTGAAAAATTACAG+TGG | + | chr5_2:61880826-61880845 | Msa0780170:intron | 25.0% |
| ! | CAAGTGATAAAGAAAAAAAC+AGG | - | chr5_2:61881537-61881556 | None:intergenic | 25.0% |
| ! | CTATTTAACAACACTGTTAT+AGG | - | chr5_2:61881852-61881871 | None:intergenic | 25.0% |
| ! | TACAAAATGTTGTCAAATAG+CGG | + | chr5_2:61881946-61881965 | Msa0780170:intron | 25.0% |
| ! | TAATATTTCGTAAGGCAATA+GGG | - | chr5_2:61881989-61882008 | None:intergenic | 25.0% |
| ! | TTAATATTTCGTAAGGCAAT+AGG | - | chr5_2:61881990-61882009 | None:intergenic | 25.0% |
| ! | ATGATAACTATGTGTTGAAT+CGG | - | chr5_2:61882643-61882662 | None:intergenic | 25.0% |
| ! | ACTTGGATAAGATTGAAAAT+GGG | - | chr5_2:61883183-61883202 | None:intergenic | 25.0% |
| ! | AACTTGGATAAGATTGAAAA+TGG | - | chr5_2:61883184-61883203 | None:intergenic | 25.0% |
| !!! | TGTTTTGGGAATTTAATGAA+TGG | - | chr5_2:61883304-61883323 | None:intergenic | 25.0% |
| !! | TTTTGTGTAAAAATTGGTAC+TGG | + | chr5_2:61883544-61883563 | Msa0780170:three_prime_UTR | 25.0% |
| CATTCATGCACAATAACTTT+GGG | - | chr5_2:61880733-61880752 | None:intergenic | 30.0% | |
| !!! | CAACACAATATTTTGATAGC+CGG | - | chr5_2:61880904-61880923 | None:intergenic | 30.0% |
| !!! | TATACGAAATTTTGACTGCA+TGG | - | chr5_2:61881012-61881031 | None:intergenic | 30.0% |
| ! | GCATTGACAAATCAATAGAT+AGG | + | chr5_2:61881082-61881101 | Msa0780170:intron | 30.0% |
| CATTCATGTTGTTGCTATAT+TGG | + | chr5_2:61881170-61881189 | Msa0780170:intron | 30.0% | |
| TGTTGCTATATTGGAACTTA+AGG | + | chr5_2:61881179-61881198 | Msa0780170:intron | 30.0% | |
| !!! | CAAACGACTCATTTTAAGTT+AGG | + | chr5_2:61881210-61881229 | Msa0780170:intron | 30.0% |
| !!! | CATTTTAAGTTAGGTGAATC+TGG | + | chr5_2:61881219-61881238 | Msa0780170:intron | 30.0% |
| !! | CGAACAACTCATTTTAAGAA+AGG | + | chr5_2:61881334-61881353 | Msa0780170:intron | 30.0% |
| AACATCAAAATTCAAGCATG+AGG | - | chr5_2:61881489-61881508 | None:intergenic | 30.0% | |
| TCACTTGAAAACAATTTCAG+TGG | + | chr5_2:61881550-61881569 | Msa0780170:intron | 30.0% | |
| ! | GATTTGCTTTGAATGTGTTT+GGG | + | chr5_2:61881714-61881733 | Msa0780170:CDS | 30.0% |
| TTGTTAAATAGCAGCTATAG+CGG | + | chr5_2:61881861-61881880 | Msa0780170:intron | 30.0% | |
| ACAAAATGTTGTCAAATAGC+GGG | + | chr5_2:61881947-61881966 | Msa0780170:intron | 30.0% | |
| CGGATTGTTAATATTTCGTA+AGG | - | chr5_2:61881997-61882016 | None:intergenic | 30.0% | |
| CTTCTATCACATAACTTTCT+TGG | + | chr5_2:61882036-61882055 | Msa0780170:intron | 30.0% | |
| !!! | ATATTTCTGACCTTTTTTGC+AGG | + | chr5_2:61882098-61882117 | Msa0780170:intron | 30.0% |
| AGAAACAGAAATATGCAGTA+TGG | + | chr5_2:61882350-61882369 | Msa0780170:CDS | 30.0% | |
| !! | ATAAGAAAGGCTTTGAAAGA+AGG | + | chr5_2:61882385-61882404 | Msa0780170:CDS | 30.0% |
| TATATATTACTAGGAGAGCT+CGG | - | chr5_2:61882463-61882482 | None:intergenic | 30.0% | |
| GTATGATTCAAAACTCAACT+CGG | + | chr5_2:61882484-61882503 | Msa0780170:intron | 30.0% | |
| !! | TTAAGAGTGTCGTTGAATTT+AGG | - | chr5_2:61882708-61882727 | None:intergenic | 30.0% |
| ATCTTTGCAGTTTCATGATA+GGG | + | chr5_2:61882755-61882774 | Msa0780170:CDS | 30.0% | |
| CTTGGATAAGATTGAAAATG+GGG | - | chr5_2:61883182-61883201 | None:intergenic | 30.0% | |
| TGATAATAAGTGTGGTTTAC+TGG | - | chr5_2:61883233-61883252 | None:intergenic | 30.0% | |
| GTAAACCACACTTATTATCA+AGG | + | chr5_2:61883233-61883252 | Msa0780170:CDS | 30.0% | |
| ! | AATGAATGGTTTGTAGTCAA+AGG | - | chr5_2:61883290-61883309 | None:intergenic | 30.0% |
| !! | AAAATTGGTACTGGTATGAA+TGG | + | chr5_2:61883553-61883572 | Msa0780170:three_prime_UTR | 30.0% |
| ! | TTCGTGTTTCTGCAATTCAT+CGG | - | chr5_2:61880411-61880430 | None:intergenic | 35.0% |
| TTACAGTAATAAGCAACGAG+AGG | - | chr5_2:61880434-61880453 | None:intergenic | 35.0% | |
| TTTAGGTCGTTTATATGCGA+TGG | + | chr5_2:61880535-61880554 | Msa0780170:intron | 35.0% | |
| !!! | AAGAAGAGCATTGGTAGTTT+TGG | - | chr5_2:61880594-61880613 | None:intergenic | 35.0% |
| TCTCATGAAACAGCTTGAAA+AGG | + | chr5_2:61880619-61880638 | Msa0780170:CDS | 35.0% | |
| CCATTCATGCACAATAACTT+TGG | - | chr5_2:61880734-61880753 | None:intergenic | 35.0% | |
| CCAAAGTTATTGTGCATGAA+TGG | + | chr5_2:61880731-61880750 | Msa0780170:intron | 35.0% | |
| GAATCTAAACGCTTAGATAG+AGG | + | chr5_2:61881041-61881060 | Msa0780170:intron | 35.0% | |
| ! | ACATGAATGCGTGATTTTCT+TGG | - | chr5_2:61881159-61881178 | None:intergenic | 35.0% |
| ! | CATGAATGTGTGCTTTTCAT+AGG | - | chr5_2:61881284-61881303 | None:intergenic | 35.0% |
| GTTGTTCGATCTTCATTCAA+AGG | - | chr5_2:61881322-61881341 | None:intergenic | 35.0% | |
| GATAAAAAGGGACTCAAGTT+GGG | + | chr5_2:61881665-61881684 | Msa0780170:CDS | 35.0% | |
| ! | ATAAAAAGGGACTCAAGTTG+GGG | + | chr5_2:61881666-61881685 | Msa0780170:CDS | 35.0% |
| ! | GGATTTGCTTTGAATGTGTT+TGG | + | chr5_2:61881713-61881732 | Msa0780170:CDS | 35.0% |
| CACTGTTATAGGCATAACAA+AGG | - | chr5_2:61881841-61881860 | None:intergenic | 35.0% | |
| TTGTACTAAATAGCGTGTCA+CGG | - | chr5_2:61881931-61881950 | None:intergenic | 35.0% | |
| TGCATTGAAGTACATACATC+AGG | - | chr5_2:61882193-61882212 | None:intergenic | 35.0% | |
| AAGTTGTTGCCATATAAGAC+AGG | - | chr5_2:61882263-61882282 | None:intergenic | 35.0% | |
| TGTCTTATATGGCAACAACT+TGG | + | chr5_2:61882262-61882281 | Msa0780170:intron | 35.0% | |
| GTCTTATATGGCAACAACTT+GGG | + | chr5_2:61882263-61882282 | Msa0780170:intron | 35.0% | |
| TCTTATATGGCAACAACTTG+GGG | + | chr5_2:61882264-61882283 | Msa0780170:intron | 35.0% | |
| GAAAGCAGCTGATATAAGAA+AGG | + | chr5_2:61882372-61882391 | Msa0780170:CDS | 35.0% | |
| ATTCAACTGTTTATTCCTGC+AGG | + | chr5_2:61882572-61882591 | Msa0780170:intron | 35.0% | |
| TGTTTATTCCTGCAGGATAT+TGG | + | chr5_2:61882579-61882598 | Msa0780170:intron | 35.0% | |
| GTTTATTCCTGCAGGATATT+GGG | + | chr5_2:61882580-61882599 | Msa0780170:intron | 35.0% | |
| CTATCATGAAACTGCAAAGA+TGG | - | chr5_2:61882756-61882775 | None:intergenic | 35.0% | |
| CATCTTTGCAGTTTCATGAT+AGG | + | chr5_2:61882754-61882773 | Msa0780170:CDS | 35.0% | |
| ! | ACTGATCTTGTGAGTATTGT+TGG | - | chr5_2:61883103-61883122 | None:intergenic | 35.0% |
| CAAGATCAGTCACAGAATTT+AGG | + | chr5_2:61883113-61883132 | Msa0780170:CDS | 35.0% | |
| ! | TGAGATTGGTGTCTTTGTAA+AGG | + | chr5_2:61883670-61883689 | Msa0780170:three_prime_UTR | 35.0% |
| ! | GAGATTGGTGTCTTTGTAAA+GGG | + | chr5_2:61883671-61883690 | Msa0780170:three_prime_UTR | 35.0% |
| ! | AGATTGGTGTCTTTGTAAAG+GGG | + | chr5_2:61883672-61883691 | Msa0780170:three_prime_UTR | 35.0% |
| ! | TTCTCTCCGAGAATTTTCCA+TGG | + | chr5_2:61880340-61880359 | Msa0780170:exon | 40.0% |
| ! | CGTTGAAGGTATGGTAACAA+AGG | - | chr5_2:61880386-61880405 | None:intergenic | 40.0% |
| CGTTTATATGCGATGGAAAG+AGG | + | chr5_2:61880542-61880561 | Msa0780170:CDS | 40.0% | |
| ! | GAGAGAAACAAGAAGAGCAT+TGG | - | chr5_2:61880603-61880622 | None:intergenic | 40.0% |
| CTTGTAACGTGACAAATCCA+CGG | - | chr5_2:61880779-61880798 | None:intergenic | 40.0% | |
| TGAGTGCATGTTTGGTATCA+CGG | - | chr5_2:61880876-61880895 | None:intergenic | 40.0% | |
| AGTGGCTGACATAGTTTGAT+TGG | + | chr5_2:61881568-61881587 | Msa0780170:intron | 40.0% | |
| GGATAAAAAGGGACTCAAGT+TGG | + | chr5_2:61881664-61881683 | Msa0780170:intron | 40.0% | |
| GCTATATCGCTAAATCGTAG+TGG | + | chr5_2:61881885-61881904 | Msa0780170:intron | 40.0% | |
| !! | TTGTCAAATAGCGGGTATAG+TGG | + | chr5_2:61881955-61881974 | Msa0780170:intron | 40.0% |
| !! | GATAGAAGTGCTGTCAATCT+GGG | - | chr5_2:61882024-61882043 | None:intergenic | 40.0% |
| !! | TGATAGAAGTGCTGTCAATC+TGG | - | chr5_2:61882025-61882044 | None:intergenic | 40.0% |
| TGGCTGTATTCCTGCAAAAA+AGG | - | chr5_2:61882111-61882130 | None:intergenic | 40.0% | |
| ! | GCTAGCAGCGTAAAATGTTT+TGG | - | chr5_2:61882131-61882150 | None:intergenic | 40.0% |
| ! | AGTTGCTAGCCTGTCTTATA+TGG | + | chr5_2:61882251-61882270 | Msa0780170:intron | 40.0% |
| !! | TTCCGAGTTTATTTTCCAGC+TGG | + | chr5_2:61882324-61882343 | Msa0780170:intron | 40.0% |
| CTCCAGCTGGAAAATAAACT+CGG | - | chr5_2:61882329-61882348 | None:intergenic | 40.0% | |
| !! | GAAAGGCTTTGAAAGAAGGA+AGG | + | chr5_2:61882389-61882408 | Msa0780170:CDS | 40.0% |
| AACTCGGTCTGTTATGAGTT+TGG | + | chr5_2:61882500-61882519 | Msa0780170:intron | 40.0% | |
| ACTACTGAAACTTCTGCTTC+TGG | + | chr5_2:61882603-61882622 | Msa0780170:CDS | 40.0% | |
| TCATGAAACTGCAAAGATGG+TGG | - | chr5_2:61882753-61882772 | None:intergenic | 40.0% | |
| !! | GTGAGATGATGGAGAAACAA+CGG | - | chr5_2:61882802-61882821 | None:intergenic | 40.0% |
| GGTGTATAAGAGTGAGATGA+TGG | - | chr5_2:61882813-61882832 | None:intergenic | 40.0% | |
| TCATCTCACTCTTATACACC+TGG | + | chr5_2:61882813-61882832 | Msa0780170:CDS | 40.0% | |
| TGATAATCTTGAGAAGGTGG+AGG | - | chr5_2:61883002-61883021 | None:intergenic | 40.0% | |
| !! | GGTTGATAATCTTGAGAAGG+TGG | - | chr5_2:61883005-61883024 | None:intergenic | 40.0% |
| TAAGAACTGTCTGATCTTGC+AGG | - | chr5_2:61883062-61883081 | None:intergenic | 40.0% | |
| !! | AGTATTGTTGGTGGTTGTAG+GGG | - | chr5_2:61883091-61883110 | None:intergenic | 40.0% |
| !! | GAGTATTGTTGGTGGTTGTA+GGG | - | chr5_2:61883092-61883111 | None:intergenic | 40.0% |
| !! | TGAGTATTGTTGGTGGTTGT+AGG | - | chr5_2:61883093-61883112 | None:intergenic | 40.0% |
| ! | GATCTTGTGAGTATTGTTGG+TGG | - | chr5_2:61883100-61883119 | None:intergenic | 40.0% |
| GTTTCGTGAGAAGGGTAATT+AGG | - | chr5_2:61883140-61883159 | None:intergenic | 40.0% | |
| TGAAAATGGGGAAGAGAGTA+AGG | - | chr5_2:61883170-61883189 | None:intergenic | 40.0% | |
| ! | AGGCTGCTTTCTGTAAAACT+TGG | - | chr5_2:61883200-61883219 | None:intergenic | 40.0% |
| ! | TGGGAAGAATATGAAGCATC+GGG | - | chr5_2:61883260-61883279 | None:intergenic | 40.0% |
| CTGGGAAGAATATGAAGCAT+CGG | - | chr5_2:61883261-61883280 | None:intergenic | 40.0% | |
| CTACTGTCATACTGGTATGT+CGG | - | chr5_2:61883374-61883393 | None:intergenic | 40.0% | |
| !! | AAAGCTGCAAGATTTGCTGT+TGG | + | chr5_2:61883431-61883450 | Msa0780170:CDS | 40.0% |
| !! | AAGCTGCAAGATTTGCTGTT+GGG | + | chr5_2:61883432-61883451 | Msa0780170:CDS | 40.0% |
| TTGCTAACAAACCCATCAGT+TGG | + | chr5_2:61883512-61883531 | Msa0780170:CDS | 40.0% | |
| AATCTTACTGGCCAACTGAT+GGG | - | chr5_2:61883526-61883545 | None:intergenic | 40.0% | |
| AAATCTTACTGGCCAACTGA+TGG | - | chr5_2:61883527-61883546 | None:intergenic | 40.0% | |
| ! | TCTCCGAGAATTTTCCATGG+CGG | + | chr5_2:61880343-61880362 | Msa0780170:exon | 45.0% |
| TCTCCGCCATGGAAAATTCT+CGG | - | chr5_2:61880349-61880368 | None:intergenic | 45.0% | |
| TATGGTAACAAAGGCTTCGC+TGG | - | chr5_2:61880377-61880396 | None:intergenic | 45.0% | |
| ATGCGATGGAAAGAGGATTG+AGG | + | chr5_2:61880549-61880568 | Msa0780170:CDS | 45.0% | |
| !! | GTTTTGGTGCGATCACTTTG+TGG | - | chr5_2:61880578-61880597 | None:intergenic | 45.0% |
| GTGCATGTTTAGTATCACCG+TGG | + | chr5_2:61880759-61880778 | Msa0780170:intron | 45.0% | |
| GTGATACCAAACATGCACTC+AGG | + | chr5_2:61880875-61880894 | Msa0780170:intron | 45.0% | |
| CAAACATGCACTCAGGTTTC+CGG | + | chr5_2:61880882-61880901 | Msa0780170:intron | 45.0% | |
| ATAGGAAACACTGCAGTCAG+CGG | - | chr5_2:61881266-61881285 | None:intergenic | 45.0% | |
| !! | GCTGTTTGATTTTCATCCGC+TGG | + | chr5_2:61881371-61881390 | Msa0780170:intron | 45.0% |
| AAGTCAGTGTATTGAGCCAG+CGG | - | chr5_2:61881390-61881409 | None:intergenic | 45.0% | |
| AATAGCGTGTCACGGAATAG+CGG | - | chr5_2:61881923-61881942 | None:intergenic | 45.0% | |
| !! | ATTTCTGTTTCTGCTCCAGC+TGG | - | chr5_2:61882342-61882361 | None:intergenic | 45.0% |
| AAACTTCTGCTTCTGGTGCT+GGG | + | chr5_2:61882610-61882629 | Msa0780170:CDS | 45.0% | |
| GCAGATTCTGGTAGTTGACA+GGG | - | chr5_2:61882668-61882687 | None:intergenic | 45.0% | |
| TCGTTGAATTTAGGTGCAGG+AGG | - | chr5_2:61882699-61882718 | None:intergenic | 45.0% | |
| ! | GTGTCGTTGAATTTAGGTGC+AGG | - | chr5_2:61882702-61882721 | None:intergenic | 45.0% |
| TCTTGGGAAGGATAAACTCC+AGG | - | chr5_2:61882834-61882853 | None:intergenic | 45.0% | |
| TGGAGGAAGATGGTAGTCTT+GGG | - | chr5_2:61882850-61882869 | None:intergenic | 45.0% | |
| ATGGAGGAAGATGGTAGTCT+TGG | - | chr5_2:61882851-61882870 | None:intergenic | 45.0% | |
| TGAAGGAGGATGGTAATCCT+GGG | - | chr5_2:61882877-61882896 | None:intergenic | 45.0% | |
| TATTCTTGGGAAGGTGAAGG+AGG | - | chr5_2:61882891-61882910 | None:intergenic | 45.0% | |
| TGGTATTCTTGGGAAGGTGA+AGG | - | chr5_2:61882894-61882913 | None:intergenic | 45.0% | |
| TGGAGGAGGATGGTATTCTT+GGG | - | chr5_2:61882904-61882923 | None:intergenic | 45.0% | |
| TGGAGGAGGATGGTATTCTT+GGG | - | chr5_2:61882904-61882923 | None:intergenic | 45.0% | |
| TAATCTTGAGAAGGTGGAGG+AGG | - | chr5_2:61882999-61883018 | None:intergenic | 45.0% | |
| !! | GGGGGTTGATAATCTTGAGA+AGG | - | chr5_2:61883008-61883027 | None:intergenic | 45.0% |
| TGATGGTAATCTTGGGATGG+TGG | - | chr5_2:61883032-61883051 | None:intergenic | 45.0% | |
| TGGAGGCTGATGGTAATCTT+GGG | - | chr5_2:61883039-61883058 | None:intergenic | 45.0% | |
| AATGGGGAAGAGAGTAAGGA+GGG | - | chr5_2:61883166-61883185 | None:intergenic | 45.0% | |
| AAATGGGGAAGAGAGTAAGG+AGG | - | chr5_2:61883167-61883186 | None:intergenic | 45.0% | |
| TACAGAAAGCAGCCTACCAT+CGG | + | chr5_2:61883205-61883224 | Msa0780170:CDS | 45.0% | |
| ! | CGGGACCTTGATAATAAGTG+TGG | - | chr5_2:61883241-61883260 | None:intergenic | 45.0% |
| TGTAGTCAAAGGAGCTGACT+GGG | - | chr5_2:61883279-61883298 | None:intergenic | 45.0% | |
| TTGTAGTCAAAGGAGCTGAC+TGG | - | chr5_2:61883280-61883299 | None:intergenic | 45.0% | |
| ! | TCTGCTGCTGGAACTGTTTT+GGG | - | chr5_2:61883318-61883337 | None:intergenic | 45.0% |
| ! | TTCTGCTGCTGGAACTGTTT+TGG | - | chr5_2:61883319-61883338 | None:intergenic | 45.0% |
| AACAGTTCCAGCAGCAGAAA+AGG | + | chr5_2:61883320-61883339 | Msa0780170:CDS | 45.0% | |
| !! | TATGTCGGAGTTGTTGGCTT+GGG | - | chr5_2:61883359-61883378 | None:intergenic | 45.0% |
| TACTGGTATGTCGGAGTTGT+TGG | - | chr5_2:61883365-61883384 | None:intergenic | 45.0% | |
| GCTGGTAACTACTGTCATAC+TGG | - | chr5_2:61883382-61883401 | None:intergenic | 45.0% | |
| ! | TCTGCTATTCTTTCAGGTGG+AGG | - | chr5_2:61883404-61883423 | None:intergenic | 45.0% |
| TCCACCTGAAAGAATAGCAG+AGG | + | chr5_2:61883403-61883422 | Msa0780170:CDS | 45.0% | |
| TGTGCCTCTGCTATTCTTTC+AGG | - | chr5_2:61883410-61883429 | None:intergenic | 45.0% | |
| !! | AGCTGCAAGATTTGCTGTTG+GGG | + | chr5_2:61883433-61883452 | Msa0780170:CDS | 45.0% |
| CGGAAACCTGAGTGCATGTT+TGG | - | chr5_2:61880884-61880903 | None:intergenic | 50.0% | |
| ! | GTGCTGTCAATCTGGGATAG+CGG | - | chr5_2:61882017-61882036 | None:intergenic | 50.0% |
| GAAAGAAGGAAGGAAGCCTG+TGG | + | chr5_2:61882399-61882418 | Msa0780170:CDS | 50.0% | |
| CAGTAGTCCCAATATCCTGC+AGG | - | chr5_2:61882590-61882609 | None:intergenic | 50.0% | |
| GAAACTTCTGCTTCTGGTGC+TGG | + | chr5_2:61882609-61882628 | Msa0780170:CDS | 50.0% | |
| GGCAGATTCTGGTAGTTGAC+AGG | - | chr5_2:61882669-61882688 | None:intergenic | 50.0% | |
| GAGGAATGCTTGGCAGATTC+TGG | - | chr5_2:61882680-61882699 | None:intergenic | 50.0% | |
| TTAGGTGCAGGAGGAATGCT+TGG | - | chr5_2:61882690-61882709 | None:intergenic | 50.0% | |
| ! | GGAAGATGGTAGTCTTGGGA+AGG | - | chr5_2:61882846-61882865 | None:intergenic | 50.0% |
| TGGTAATCCTGGGAAGATGG+AGG | - | chr5_2:61882867-61882886 | None:intergenic | 50.0% | |
| GGATGGTAATCCTGGGAAGA+TGG | - | chr5_2:61882870-61882889 | None:intergenic | 50.0% | |
| GTGAAGGAGGATGGTAATCC+TGG | - | chr5_2:61882878-61882897 | None:intergenic | 50.0% | |
| GGAGGATGGTATTCTTGGGA+AGG | - | chr5_2:61882900-61882919 | None:intergenic | 50.0% | |
| GTGGAGGAGGATGGTATTCT+TGG | - | chr5_2:61882905-61882924 | None:intergenic | 50.0% | |
| TATTCTTGGGAAGGTGGAGG+AGG | - | chr5_2:61882918-61882937 | None:intergenic | 50.0% | |
| TGGTATTCTTGGGAAGGTGG+AGG | - | chr5_2:61882921-61882940 | None:intergenic | 50.0% | |
| GGATGGTATTCTTGGGAAGG+TGG | - | chr5_2:61882897-61882916 | None:intergenic | 50.0% | |
| GGAGGATGGTATTCTTGGGA+AGG | - | chr5_2:61882900-61882919 | None:intergenic | 50.0% | |
| GTGGAGGAGGATGGTATTCT+TGG | - | chr5_2:61882905-61882924 | None:intergenic | 50.0% | |
| TAATCTTGGGAAGGTGGAGG+AGG | - | chr5_2:61882945-61882964 | None:intergenic | 50.0% | |
| TGGTAATCTTGGGAAGGTGG+AGG | - | chr5_2:61882948-61882967 | None:intergenic | 50.0% | |
| GGATGGTAATCTTGGGAAGG+TGG | - | chr5_2:61882951-61882970 | None:intergenic | 50.0% | |
| GGAGGATGGTAATCTTGGGA+AGG | - | chr5_2:61882954-61882973 | None:intergenic | 50.0% | |
| TGGCGGAGGATGGTAATCTT+GGG | - | chr5_2:61882958-61882977 | None:intergenic | 50.0% | |
| ! | ATGGCGGAGGATGGTAATCT+TGG | - | chr5_2:61882959-61882978 | None:intergenic | 50.0% |
| TGGTAATCCTGGGAAGATGG+CGG | - | chr5_2:61882867-61882886 | None:intergenic | 50.0% | |
| GGATGGTAATCCTGGGAAGA+TGG | - | chr5_2:61882870-61882889 | None:intergenic | 50.0% | |
| TGGAGGAGGATGGTAATCCT+GGG | - | chr5_2:61882985-61883004 | None:intergenic | 50.0% | |
| !! | TAATCTTGGGATGGTGGAGG+GGG | - | chr5_2:61883026-61883045 | None:intergenic | 50.0% |
| !! | GTAATCTTGGGATGGTGGAG+GGG | - | chr5_2:61883027-61883046 | None:intergenic | 50.0% |
| !! | GGTAATCTTGGGATGGTGGA+GGG | - | chr5_2:61883028-61883047 | None:intergenic | 50.0% |
| ! | TGGTAATCTTGGGATGGTGG+AGG | - | chr5_2:61883029-61883048 | None:intergenic | 50.0% |
| GGCTGATGGTAATCTTGGGA+TGG | - | chr5_2:61883035-61883054 | None:intergenic | 50.0% | |
| GTGGAGGCTGATGGTAATCT+TGG | - | chr5_2:61883040-61883059 | None:intergenic | 50.0% | |
| GAACTGTCTGATCTTGCAGG+TGG | - | chr5_2:61883059-61883078 | None:intergenic | 50.0% | |
| ATGGGGAAGAGAGTAAGGAG+GGG | - | chr5_2:61883165-61883184 | None:intergenic | 50.0% | |
| !! | GGTTTACTGGTACCGATGGT+AGG | - | chr5_2:61883220-61883239 | None:intergenic | 50.0% |
| ! | GTGTGGTTTACTGGTACCGA+TGG | - | chr5_2:61883224-61883243 | None:intergenic | 50.0% |
| ! | GACAGTACCTTTTCTGCTGC+TGG | - | chr5_2:61883330-61883349 | None:intergenic | 50.0% |
| !! | CAGCAGAAAAGGTACTGTCC+CGG | + | chr5_2:61883331-61883350 | Msa0780170:CDS | 50.0% |
| ! | GTATGTCGGAGTTGTTGGCT+TGG | - | chr5_2:61883360-61883379 | None:intergenic | 50.0% |
| ! | CTATTCTTTCAGGTGGAGGC+TGG | - | chr5_2:61883400-61883419 | None:intergenic | 50.0% |
| GCCTCTGCTATTCTTTCAGG+TGG | - | chr5_2:61883407-61883426 | None:intergenic | 50.0% | |
| !! | AAGATTTGCTGTTGGGGCAC+TGG | + | chr5_2:61883439-61883458 | Msa0780170:CDS | 50.0% |
| TCATCGGCGCGTTGAAGGTA+TGG | - | chr5_2:61880395-61880414 | None:intergenic | 55.0% | |
| GCAATTCATCGGCGCGTTGA+AGG | - | chr5_2:61880400-61880419 | None:intergenic | 55.0% | |
| GCAGACAAGCAAGATCGTGC+TGG | + | chr5_2:61881740-61881759 | Msa0780170:CDS | 55.0% | |
| CCTGGGAAGATGGAGGAAGA+TGG | - | chr5_2:61882860-61882879 | None:intergenic | 55.0% | |
| CCATCTTCCTCCATCTTCCC+AGG | + | chr5_2:61882857-61882876 | Msa0780170:CDS | 55.0% | |
| CTTGGGAAGGTGAAGGAGGA+TGG | - | chr5_2:61882887-61882906 | None:intergenic | 55.0% | |
| ! | TAATCCTGGGAAGATGGCGG+AGG | - | chr5_2:61882972-61882991 | None:intergenic | 55.0% |
| GTGGAGGAGGATGGTAATCC+TGG | - | chr5_2:61882986-61883005 | None:intergenic | 55.0% | |
| CTTGAGAAGGTGGAGGAGGA+TGG | - | chr5_2:61882995-61883014 | None:intergenic | 55.0% | |
| ATCTTGCAGGTGGAGGCTGA+TGG | - | chr5_2:61883049-61883068 | None:intergenic | 55.0% | |
| CTGTCTGATCTTGCAGGTGG+AGG | - | chr5_2:61883056-61883075 | None:intergenic | 55.0% | |
| GAGGGGGAGTTTCGTGAGAA+GGG | - | chr5_2:61883148-61883167 | None:intergenic | 55.0% | |
| TGGGGAAGAGAGTAAGGAGG+GGG | - | chr5_2:61883164-61883183 | None:intergenic | 55.0% | |
| !! | GAGTTGTTGGCTTGGGTTCC+GGG | - | chr5_2:61883352-61883371 | None:intergenic | 55.0% |
| !! | GGAGTTGTTGGCTTGGGTTC+CGG | - | chr5_2:61883353-61883372 | None:intergenic | 55.0% |
| GAAGGAAGGAAGCCTGTGGC+TGG | + | chr5_2:61882403-61882422 | Msa0780170:CDS | 60.0% | |
| ACTAGGAGAGCTCGGCAGAG+CGG | - | chr5_2:61882455-61882474 | None:intergenic | 60.0% | |
| CTTGGGAAGGTGGAGGAGGA+TGG | - | chr5_2:61882914-61882933 | None:intergenic | 60.0% | |
| CTTGGGAAGGTGGAGGAGGA+TGG | - | chr5_2:61882914-61882933 | None:intergenic | 60.0% | |
| GGAGGGGGAGTTTCGTGAGA+AGG | - | chr5_2:61883149-61883168 | None:intergenic | 60.0% | |
| !! | CGCTGGTTCGTTCTCCGCCA+TGG | - | chr5_2:61880360-61880379 | None:intergenic | 65.0% |
| GGTCCTCGTCACCAGCAGGT+GGG | - | chr5_2:61882429-61882448 | None:intergenic | 65.0% | |
| AGGTCCTCGTCACCAGCAGG+TGG | - | chr5_2:61882430-61882449 | None:intergenic | 65.0% | |
| GACAGGTCCTCGTCACCAGC+AGG | - | chr5_2:61882433-61882452 | None:intergenic | 65.0% | |
| !! | CCTGGGAAGATGGCGGAGGA+TGG | - | chr5_2:61882968-61882987 | None:intergenic | 65.0% |
| CCATCCTCCGCCATCTTCCC+AGG | + | chr5_2:61882965-61882984 | Msa0780170:CDS | 65.0% | |
| ! | TGGCCCACCTGCTGGTGACG+AGG | + | chr5_2:61882423-61882442 | Msa0780170:CDS | 70.0% |
| GAGAGCTCGGCAGAGCGGAC+AGG | - | chr5_2:61882450-61882469 | None:intergenic | 70.0% | |
| CCAGCAGGTGGGCCAGCCAC+AGG | - | chr5_2:61882418-61882437 | None:intergenic | 75.0% | |
| ! | CCTGTGGCTGGCCCACCTGC+TGG | + | chr5_2:61882415-61882434 | Msa0780170:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 61880294 | 61883727 | 61880294 | ID=Msa0780170;Name=Msa0780170 |
| chr5_2 | mRNA | 61880294 | 61883727 | 61880294 | ID=Msa0780170-mRNA-1;Parent=Msa0780170;Name=Msa0780170-mRNA-1;_AED=0.06;_eAED=0.06;_QI=65|1|1|1|1|1|6|186|488 |
| chr5_2 | exon | 61880294 | 61880449 | 61880294 | ID=Msa0780170-mRNA-1:exon:18161;Parent=Msa0780170-mRNA-1 |
| chr5_2 | exon | 61880540 | 61880640 | 61880540 | ID=Msa0780170-mRNA-1:exon:18162;Parent=Msa0780170-mRNA-1 |
| chr5_2 | exon | 61881665 | 61881774 | 61881665 | ID=Msa0780170-mRNA-1:exon:18163;Parent=Msa0780170-mRNA-1 |
| chr5_2 | exon | 61882120 | 61882195 | 61882120 | ID=Msa0780170-mRNA-1:exon:18164;Parent=Msa0780170-mRNA-1 |
| chr5_2 | exon | 61882343 | 61882483 | 61882343 | ID=Msa0780170-mRNA-1:exon:18165;Parent=Msa0780170-mRNA-1 |
| chr5_2 | exon | 61882594 | 61883727 | 61882594 | ID=Msa0780170-mRNA-1:exon:18166;Parent=Msa0780170-mRNA-1 |
| chr5_2 | five_prime_UTR | 61880294 | 61880358 | 61880294 | ID=Msa0780170-mRNA-1:five_prime_utr;Parent=Msa0780170-mRNA-1 |
| chr5_2 | CDS | 61880359 | 61880449 | 61880359 | ID=Msa0780170-mRNA-1:cds;Parent=Msa0780170-mRNA-1 |
| chr5_2 | CDS | 61880540 | 61880640 | 61880540 | ID=Msa0780170-mRNA-1:cds;Parent=Msa0780170-mRNA-1 |
| chr5_2 | CDS | 61881665 | 61881774 | 61881665 | ID=Msa0780170-mRNA-1:cds;Parent=Msa0780170-mRNA-1 |
| chr5_2 | CDS | 61882120 | 61882195 | 61882120 | ID=Msa0780170-mRNA-1:cds;Parent=Msa0780170-mRNA-1 |
| chr5_2 | CDS | 61882343 | 61882483 | 61882343 | ID=Msa0780170-mRNA-1:cds;Parent=Msa0780170-mRNA-1 |
| chr5_2 | CDS | 61882594 | 61883541 | 61882594 | ID=Msa0780170-mRNA-1:cds;Parent=Msa0780170-mRNA-1 |
| chr5_2 | three_prime_UTR | 61883542 | 61883727 | 61883542 | ID=Msa0780170-mRNA-1:three_prime_utr;Parent=Msa0780170-mRNA-1 |
| Gene Sequence |
| Protein sequence |
