Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0863280 | XP_003617645.1 | 97.336 | 488 | 12 | 1 | 1 | 488 | 1 | 487 | 0.0 | 948 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0863280 | sp|Q9SZ15|LIP5_ARATH | 48.185 | 496 | 163 | 14 | 4 | 487 | 5 | 418 | 3.16e-115 | 348 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0863280 | G7K8Q1 | 97.336 | 488 | 12 | 1 | 1 | 488 | 1 | 487 | 0.0 | 948 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0743130 | Msa0863280 | 0.965880 | 3.507806e-125 | -8.615850e-47 |
| Msa0780170 | Msa0863280 | 0.895615 | 8.102469e-76 | -8.615850e-47 |
| Msa0294560 | Msa0863280 | 0.800783 | 1.225966e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0863280 | MtrunA17_Chr5g0444891 | 97.336 | 488 | 12 | 1 | 1 | 488 | 1 | 487 | 0.0 | 948 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0863280 | AT4G26750.1 | 48.185 | 496 | 163 | 14 | 4 | 487 | 5 | 418 | 3.21e-116 | 348 |
Find 167 sgRNAs with CRISPR-Local
Find 252 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTGCCTCTGCTATTCTTTC+AGG | 0.134746 | 5_4:-63067664 | None:intergenic |
| TTCTGCTGCTGGAACTGTTT+TGG | 0.177816 | 5_4:-63067573 | None:intergenic |
| TTTGAGATTCTTAATCAATT+TGG | 0.204458 | 5_4:+63066415 | Msa0863280:CDS |
| AACTTGGATAAGATTGAAAA+TGG | 0.218480 | 5_4:-63067438 | None:intergenic |
| TGTTTATTCCTGCAGGATAT+TGG | 0.237590 | 5_4:+63066836 | Msa0863280:intron |
| TTAAGAGTGTCGTTGAATTT+AGG | 0.245833 | 5_4:-63066962 | None:intergenic |
| GAGTTGTTGGCTTGGGTTCC+GGG | 0.246329 | 5_4:-63067606 | None:intergenic |
| TTATTGTTTATAGGATAAAA+AGG | 0.254607 | 5_4:+63065908 | Msa0863280:intron |
| GGAGTTGTTGGCTTGGGTTC+CGG | 0.263293 | 5_4:-63067607 | None:intergenic |
| TGATAATAAGTGTGGTTTAC+TGG | 0.267283 | 5_4:-63067487 | None:intergenic |
| GTGGAGGAGGATGGTATTCT+TGG | 0.285105 | 5_4:-63067159 | None:intergenic |
| GTGGAGGAGGATGGTATTCT+TGG | 0.285105 | 5_4:-63067186 | None:intergenic |
| CATCTTTGCAGTTTCATGAT+AGG | 0.285900 | 5_4:+63067011 | Msa0863280:CDS |
| AAGAAGAGCATTGGTAGTTT+TGG | 0.293479 | 5_4:-63064838 | None:intergenic |
| GAAACTTCTGCTTCTGGTGC+TGG | 0.302418 | 5_4:+63066866 | Msa0863280:CDS |
| GTTTATTCCTGCAGGATATT+GGG | 0.307438 | 5_4:+63066837 | Msa0863280:intron |
| GTTTCGTGAGAAGGGTAATT+AGG | 0.308078 | 5_4:-63067394 | None:intergenic |
| GGATTTGCTTTGAATGTGTT+TGG | 0.322140 | 5_4:+63065969 | Msa0863280:CDS |
| TGAGTATTGTTGGTGGTTGT+AGG | 0.322811 | 5_4:-63067347 | None:intergenic |
| CAAGATCAGTCACAGAATTT+AGG | 0.329866 | 5_4:+63067370 | Msa0863280:CDS |
| GAGGAATGCTTGGCAGATTC+TGG | 0.332427 | 5_4:-63066934 | None:intergenic |
| GTAATCTTGGGATGGTGGAG+GGG | 0.340744 | 5_4:-63067281 | None:intergenic |
| GTGGAGGAGGATGGTAATCC+TGG | 0.345422 | 5_4:-63067240 | None:intergenic |
| TACTGGTATGTCGGAGTTGT+TGG | 0.354417 | 5_4:-63067619 | None:intergenic |
| GCTAGCAGCGTAAAATGTTT+TGG | 0.359188 | 5_4:-63066386 | None:intergenic |
| TAATCTTGGGATGGTGGAGG+GGG | 0.367428 | 5_4:-63067280 | None:intergenic |
| ACTTGGATAAGATTGAAAAT+GGG | 0.376597 | 5_4:-63067437 | None:intergenic |
| TAAGAACTGTCTGATCTTGC+AGG | 0.381758 | 5_4:-63067316 | None:intergenic |
| GTGGAGGCTGATGGTAATCT+TGG | 0.383288 | 5_4:-63067294 | None:intergenic |
| TGAAAATGGGGAAGAGAGTA+AGG | 0.385158 | 5_4:-63067424 | None:intergenic |
| TGGTAATCTTGGGATGGTGG+AGG | 0.385786 | 5_4:-63067283 | None:intergenic |
| GGCAGATTCTGGTAGTTGAC+AGG | 0.387519 | 5_4:-63066923 | None:intergenic |
| ATGGCGGAGGATGGTAATCT+TGG | 0.389781 | 5_4:-63067213 | None:intergenic |
| TGGTATTCTTGGGAAGGTGG+TGG | 0.395977 | 5_4:-63067148 | None:intergenic |
| AAGATTTGCTGTTGGGGCAC+TGG | 0.399437 | 5_4:+63067696 | Msa0863280:CDS |
| ATGGAGGAGGATGGTAGTCT+TGG | 0.402313 | 5_4:-63067105 | None:intergenic |
| CCTGTGGCTGGCCCACCTGC+TGG | 0.403221 | 5_4:+63066672 | Msa0863280:CDS |
| ACTGATCTTGTGAGTATTGT+TGG | 0.408641 | 5_4:-63067357 | None:intergenic |
| ACTACTGAAACTTCTGCTTC+TGG | 0.414352 | 5_4:+63066860 | Msa0863280:CDS |
| AAGCTGCAAGATTTGCTGTT+GGG | 0.416451 | 5_4:+63067689 | Msa0863280:CDS |
| GGTAATCTTGGGATGGTGGA+GGG | 0.421779 | 5_4:-63067282 | None:intergenic |
| GAAGATAATTTATATCTTGA+GGG | 0.424873 | 5_4:+63065948 | Msa0863280:CDS |
| ATCTTTGCAGTTTCATGATA+GGG | 0.431940 | 5_4:+63067012 | Msa0863280:CDS |
| ATGATAACTATGTGTTGAAT+CGG | 0.432222 | 5_4:-63066897 | None:intergenic |
| TCATCGGCGCGTTGAAGGTA+TGG | 0.436007 | 5_4:-63064639 | None:intergenic |
| CATTAATATAGAATTGAGAT+TGG | 0.437174 | 5_4:+63067940 | Msa0863280:intron |
| GAGTATTGTTGGTGGTTGTA+GGG | 0.438226 | 5_4:-63067346 | None:intergenic |
| GATTTGCTTTGAATGTGTTT+GGG | 0.440793 | 5_4:+63065970 | Msa0863280:CDS |
| TCTCATGAAACAGCTTGAAA+AGG | 0.442260 | 5_4:+63064866 | Msa0863280:CDS |
| AATCATACATATATATTACT+AGG | 0.444945 | 5_4:-63066726 | None:intergenic |
| ATAAGAAAGGCTTTGAAAGA+AGG | 0.446815 | 5_4:+63066642 | Msa0863280:CDS |
| GGTATTCTTGGGAAGGTGGT+GGG | 0.448979 | 5_4:-63067147 | None:intergenic |
| GAGAGCTCGGCAGAGCGGAC+AGG | 0.449022 | 5_4:-63066704 | None:intergenic |
| CGCTGGTTCGTTCTCCGCCA+TGG | 0.449805 | 5_4:-63064604 | None:intergenic |
| CTATTCTTTCAGGTGGAGGC+TGG | 0.456145 | 5_4:-63067654 | None:intergenic |
| CTTGAGAAGGTGGAGGAGGA+TGG | 0.462748 | 5_4:-63067249 | None:intergenic |
| AACAGTTCCAGCAGCAGAAA+AGG | 0.463781 | 5_4:+63067577 | Msa0863280:CDS |
| TCAAGATATAAATTATCTTC+AGG | 0.464007 | 5_4:-63065945 | None:intergenic |
| CGTTTATATGCGATGGAAAG+AGG | 0.465990 | 5_4:+63064789 | Msa0863280:CDS |
| GCAATTCATCGGCGCGTTGA+AGG | 0.466290 | 5_4:-63064644 | None:intergenic |
| AGAAACAGAAATATGCAGTA+TGG | 0.466421 | 5_4:+63066607 | Msa0863280:CDS |
| CTTGGGAAGGTGGAGGAGGA+TGG | 0.470573 | 5_4:-63067168 | None:intergenic |
| CTTGGGAAGGTGGAGGAGGA+TGG | 0.470573 | 5_4:-63067195 | None:intergenic |
| CTATCATGAAACTGCAAAGA+TGG | 0.476651 | 5_4:-63067010 | None:intergenic |
| TTCGTGTTTCTGCAATTCAT+CGG | 0.479969 | 5_4:-63064655 | None:intergenic |
| TTGTAGTCAGAGGAGCTGAC+TGG | 0.480299 | 5_4:-63067534 | None:intergenic |
| GGATGGTATTCTTGGGAAGG+TGG | 0.483390 | 5_4:-63067178 | None:intergenic |
| TGGAGGAGGATGGTAGTCTT+GGG | 0.486188 | 5_4:-63067104 | None:intergenic |
| TAATCTTGGGAAGGTGGAGG+AGG | 0.487363 | 5_4:-63067199 | None:intergenic |
| AGGCTGCTTTCTGTAAAACT+TGG | 0.488429 | 5_4:-63067454 | None:intergenic |
| TATGTCGGAGTTGTTGGCTT+GGG | 0.489287 | 5_4:-63067613 | None:intergenic |
| TGAAGATAATTTATATCTTG+AGG | 0.489442 | 5_4:+63065947 | Msa0863280:CDS |
| CCATCCTCCGCCATCTTCCC+AGG | 0.489477 | 5_4:+63067222 | Msa0863280:CDS |
| TATTCTTGGGAAGGTGGAGG+AGG | 0.490689 | 5_4:-63067172 | None:intergenic |
| GGATGGTATTCTTGGGAAGG+TGG | 0.492174 | 5_4:-63067151 | None:intergenic |
| TAATCTTGAGAAGGTGGAGG+AGG | 0.493863 | 5_4:-63067253 | None:intergenic |
| TATGGTAACAAAGGCTTCGC+TGG | 0.495318 | 5_4:-63064621 | None:intergenic |
| TGATGATAATCCTGGGAAGA+TGG | 0.496116 | 5_4:-63067124 | None:intergenic |
| GTGGTGGGTGATGATAATCC+TGG | 0.496882 | 5_4:-63067132 | None:intergenic |
| AAACTTCTGCTTCTGGTGCT+GGG | 0.497466 | 5_4:+63066867 | Msa0863280:CDS |
| GGTGTATAAGAGTGAGATGA+TGG | 0.497876 | 5_4:-63067067 | None:intergenic |
| GAGATTGGTGTCTTTGTCAA+GGG | 0.498931 | 5_4:+63067955 | Msa0863280:three_prime_UTR |
| TCTGCTATTCTTTCAGGTGG+AGG | 0.499453 | 5_4:-63067658 | None:intergenic |
| GCTGGTAACTACTGTCATAC+TGG | 0.499902 | 5_4:-63067636 | None:intergenic |
| CCAGCAGGTGGGCCAGCCAC+AGG | 0.500659 | 5_4:-63066672 | None:intergenic |
| GTATGTCGGAGTTGTTGGCT+TGG | 0.500827 | 5_4:-63067614 | None:intergenic |
| TTAGGTGCAGGAGGAATGCT+TGG | 0.501005 | 5_4:-63066944 | None:intergenic |
| AAATCTTACTGGCCAACTGA+TGG | 0.501251 | 5_4:-63067781 | None:intergenic |
| GGATGGTAATCCTGGGAAGA+TGG | 0.502963 | 5_4:-63067232 | None:intergenic |
| TGGGAAGAATATGAAGCATC+GGG | 0.505824 | 5_4:-63067514 | None:intergenic |
| TCTCCGCCATGGAAAATTCT+CGG | 0.508445 | 5_4:-63064593 | None:intergenic |
| TTTAGGTCGTTTATATGCGA+TGG | 0.510248 | 5_4:+63064782 | Msa0863280:intron |
| TGGAGGAGGATGGTATTCTT+GGG | 0.510443 | 5_4:-63067158 | None:intergenic |
| TGGAGGAGGATGGTATTCTT+GGG | 0.510443 | 5_4:-63067185 | None:intergenic |
| TGGCGGAGGATGGTAATCTT+GGG | 0.517941 | 5_4:-63067212 | None:intergenic |
| GAGAGAAACAAGAAGAGCAT+TGG | 0.519492 | 5_4:-63064847 | None:intergenic |
| GCCTCTGCTATTCTTTCAGG+TGG | 0.521868 | 5_4:-63067661 | None:intergenic |
| GAAGGAAGGAAGCCTGTGGC+TGG | 0.522191 | 5_4:+63066660 | Msa0863280:CDS |
| AAAGCTGCAAGATTTGCTGT+TGG | 0.523329 | 5_4:+63067688 | Msa0863280:CDS |
| GACAGGTCCTCGTCACCAGC+AGG | 0.523402 | 5_4:-63066687 | None:intergenic |
| CTTGGATAAGATTGAAAATG+GGG | 0.523875 | 5_4:-63067436 | None:intergenic |
| CTGTCTGATCTTGCAGGTGG+AGG | 0.526101 | 5_4:-63067310 | None:intergenic |
| AGGTCCTCGTCACCAGCAGG+TGG | 0.527025 | 5_4:-63066684 | None:intergenic |
| AAAATTGGTACTGGTATGAA+TGG | 0.527893 | 5_4:+63067810 | Msa0863280:three_prime_UTR |
| ATGCGATGGAAAGAGGATTG+AGG | 0.529928 | 5_4:+63064796 | Msa0863280:CDS |
| AATCTTACTGGCCAACTGAT+GGG | 0.529939 | 5_4:-63067780 | None:intergenic |
| TGGTATTCTTGGGAAGGTGG+AGG | 0.531288 | 5_4:-63067175 | None:intergenic |
| TGGTAATCTTGGGAAGGTGG+AGG | 0.531288 | 5_4:-63067202 | None:intergenic |
| GAAAGGCTTTGAAAGAAGGA+AGG | 0.532058 | 5_4:+63066646 | Msa0863280:CDS |
| TGAGATTGGTGTCTTTGTCA+AGG | 0.533167 | 5_4:+63067954 | Msa0863280:three_prime_UTR |
| AATGGGGAAGAGAGTAAGGA+GGG | 0.535585 | 5_4:-63067420 | None:intergenic |
| GAAAGCAGCTGATATAAGAA+AGG | 0.537489 | 5_4:+63066629 | Msa0863280:CDS |
| CTGGGAAGAATATGAAGCAT+CGG | 0.541818 | 5_4:-63067515 | None:intergenic |
| TGGAGGCTGATGGTAATCTT+GGG | 0.542772 | 5_4:-63067293 | None:intergenic |
| GTAAACCACACTTATTATCA+AGG | 0.542813 | 5_4:+63067490 | Msa0863280:CDS |
| GTGTCGTTGAATTTAGGTGC+AGG | 0.546530 | 5_4:-63066956 | None:intergenic |
| GATCTTGTGAGTATTGTTGG+TGG | 0.547197 | 5_4:-63067354 | None:intergenic |
| GCAGACAAGCAAGATCGTGC+TGG | 0.548143 | 5_4:+63065996 | Msa0863280:CDS |
| CCATCCTCCTCCATCTTCCC+AGG | 0.549730 | 5_4:+63067114 | Msa0863280:CDS |
| GGCTGATGGTAATCTTGGGA+TGG | 0.550328 | 5_4:-63067289 | None:intergenic |
| TGGGGAAGAGAGTAAGGAGG+GGG | 0.550544 | 5_4:-63067418 | None:intergenic |
| TGTAGTCAGAGGAGCTGACT+GGG | 0.551319 | 5_4:-63067533 | None:intergenic |
| AATGAATGGTTTGTAGTCAG+AGG | 0.554312 | 5_4:-63067544 | None:intergenic |
| GGATGGTAATCTTGGGAAGG+TGG | 0.559838 | 5_4:-63067205 | None:intergenic |
| AGTATTGTTGGTGGTTGTAG+GGG | 0.560541 | 5_4:-63067345 | None:intergenic |
| AGCTGCAAGATTTGCTGTTG+GGG | 0.561218 | 5_4:+63067690 | Msa0863280:CDS |
| TTGCTAACAAACCCATCAGT+TGG | 0.561547 | 5_4:+63067769 | Msa0863280:CDS |
| TGGCCCACCTGCTGGTGACG+AGG | 0.563390 | 5_4:+63066680 | Msa0863280:CDS |
| CCTGGGAAGATGGCGGAGGA+TGG | 0.567339 | 5_4:-63067222 | None:intergenic |
| GCAGATTCTGGTAGTTGACA+GGG | 0.573055 | 5_4:-63066922 | None:intergenic |
| GGAGGATGGTATTCTTGGGA+AGG | 0.584118 | 5_4:-63067154 | None:intergenic |
| GGAGGATGGTATTCTTGGGA+AGG | 0.584118 | 5_4:-63067181 | None:intergenic |
| GGTTGATAATCTTGAGAAGG+TGG | 0.586451 | 5_4:-63067259 | None:intergenic |
| CTACTGTCATACTGGTATGT+CGG | 0.586527 | 5_4:-63067628 | None:intergenic |
| CAGCAGAAAAGGTACTGTCC+CGG | 0.588967 | 5_4:+63067588 | Msa0863280:CDS |
| TCATGAAACTGCAAAGATGG+TGG | 0.589439 | 5_4:-63067007 | None:intergenic |
| TCTTGGGAAGGATAAACTCC+AGG | 0.591333 | 5_4:-63067088 | None:intergenic |
| TGATGGTAATCTTGGGATGG+TGG | 0.592478 | 5_4:-63067286 | None:intergenic |
| TATATATTACTAGGAGAGCT+CGG | 0.600017 | 5_4:-63066717 | None:intergenic |
| TCATCTCACTCTTATACACC+TGG | 0.602585 | 5_4:+63067070 | Msa0863280:CDS |
| GGAGGATGGTAGTCTTGGGA+AGG | 0.602964 | 5_4:-63067100 | None:intergenic |
| AGATTGGTGTCTTTGTCAAG+GGG | 0.605961 | 5_4:+63067956 | Msa0863280:three_prime_UTR |
| TGATAATCTTGAGAAGGTGG+AGG | 0.608409 | 5_4:-63067256 | None:intergenic |
| CCTGGGAAGATGGAGGAGGA+TGG | 0.609866 | 5_4:-63067114 | None:intergenic |
| CGGGACCTTGATAATAAGTG+TGG | 0.610947 | 5_4:-63067495 | None:intergenic |
| ATCTTGCAGGTGGAGGCTGA+TGG | 0.612435 | 5_4:-63067303 | None:intergenic |
| CGTTGAAGGTATGGTAACAA+AGG | 0.615442 | 5_4:-63064630 | None:intergenic |
| TGGAGGAGGATGGTAATCCT+GGG | 0.619455 | 5_4:-63067239 | None:intergenic |
| TAATCCTGGGAAGATGGAGG+AGG | 0.623898 | 5_4:-63067118 | None:intergenic |
| GGTTTACTGGTACCGACGGT+AGG | 0.625435 | 5_4:-63067474 | None:intergenic |
| TACAGAAAGCAGCCTACCGT+CGG | 0.625941 | 5_4:+63067462 | Msa0863280:CDS |
| TGGTAATCCTGGGAAGATGG+CGG | 0.626991 | 5_4:-63067229 | None:intergenic |
| AAATGGGGAAGAGAGTAAGG+AGG | 0.630859 | 5_4:-63067421 | None:intergenic |
| ATGGGGAAGAGAGTAAGGAG+GGG | 0.633348 | 5_4:-63067419 | None:intergenic |
| TAATCCTGGGAAGATGGCGG+AGG | 0.637109 | 5_4:-63067226 | None:intergenic |
| GTGTGGTTTACTGGTACCGA+CGG | 0.643953 | 5_4:-63067478 | None:intergenic |
| TCGTTGAATTTAGGTGCAGG+AGG | 0.645300 | 5_4:-63066953 | None:intergenic |
| GAACTGTCTGATCTTGCAGG+TGG | 0.649066 | 5_4:-63067313 | None:intergenic |
| TCCACCTGAAAGAATAGCAG+AGG | 0.659264 | 5_4:+63067660 | Msa0863280:CDS |
| TGGTGGGTGATGATAATCCT+GGG | 0.660191 | 5_4:-63067131 | None:intergenic |
| TGATAATCCTGGGAAGATGG+AGG | 0.661390 | 5_4:-63067121 | None:intergenic |
| GGTCCTCGTCACCAGCAGGT+GGG | 0.661611 | 5_4:-63066683 | None:intergenic |
| GTGAGATGATGGAGAAACAA+CGG | 0.665021 | 5_4:-63067056 | None:intergenic |
| GGAGGATGGTAATCTTGGGA+AGG | 0.668348 | 5_4:-63067208 | None:intergenic |
| GAAAGAAGGAAGGAAGCCTG+TGG | 0.681972 | 5_4:+63066656 | Msa0863280:CDS |
| TTACAGTAATAAGCAACGAG+AGG | 0.703762 | 5_4:-63064678 | None:intergenic |
| ACTAGGAGAGCTCGGCAGAG+CGG | 0.722295 | 5_4:-63066709 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATATAATTAATATAATT+AGG | - | chr5_4:63064755-63064774 | None:intergenic | 0.0% |
| !!! | TTAATATAATTAGGTTATTT+TGG | - | chr5_4:63064746-63064765 | None:intergenic | 10.0% |
| !!! | ATTATATTTTTTGTGAATTT+AGG | + | chr5_4:63064765-63064784 | Msa0863280:intron | 10.0% |
| !!! | ATAATTTTATAAACATATTG+AGG | - | chr5_4:63065881-63065900 | None:intergenic | 10.0% |
| !! | TGTAAATAATAGTAAATTGA+AGG | - | chr5_4:63065688-63065707 | None:intergenic | 15.0% |
| !! | TTATTGTTTATAGGATAAAA+AGG | + | chr5_4:63065908-63065927 | Msa0863280:intron | 15.0% |
| !! | TATTGTTTATAGGATAAAAA+GGG | + | chr5_4:63065909-63065928 | Msa0863280:intron | 15.0% |
| !! | TTAAAAATACAATTACACAA+AGG | - | chr5_4:63066558-63066577 | None:intergenic | 15.0% |
| !! | AATCATACATATATATTACT+AGG | - | chr5_4:63066729-63066748 | None:intergenic | 15.0% |
| !! | ATTGAATGAATTGAATTCAT+TGG | + | chr5_4:63065203-63065222 | Msa0863280:intron | 20.0% |
| !! | AAAATTTCGTATAGTTAGAT+AGG | + | chr5_4:63065275-63065294 | Msa0863280:intron | 20.0% |
| !! | ATCGTTGTATTATTGTTTAT+AGG | + | chr5_4:63065899-63065918 | Msa0863280:intron | 20.0% |
| !! | TCAAGATATAAATTATCTTC+AGG | - | chr5_4:63065948-63065967 | None:intergenic | 20.0% |
| !! | TGAAGATAATTTATATCTTG+AGG | + | chr5_4:63065947-63065966 | Msa0863280:CDS | 20.0% |
| !! | GAAGATAATTTATATCTTGA+GGG | + | chr5_4:63065948-63065967 | Msa0863280:CDS | 20.0% |
| !!! | TTTGAGATTCTTAATCAATT+TGG | + | chr5_4:63066415-63066434 | Msa0863280:CDS | 20.0% |
| !!! | ATTTTTACACAAAATCTTAC+TGG | - | chr5_4:63067795-63067814 | None:intergenic | 20.0% |
| !!! | GTAAGATTTTGTGTAAAAAT+TGG | + | chr5_4:63067795-63067814 | Msa0863280:exon | 20.0% |
| !! | CATTAATATAGAATTGAGAT+TGG | + | chr5_4:63067940-63067959 | Msa0863280:intron | 20.0% |
| !!! | TAGCTTTTGAAAAATTACAG+TGG | + | chr5_4:63065073-63065092 | Msa0863280:intron | 25.0% |
| !!! | TCATTTTAAGAAAGGAAACT+TGG | + | chr5_4:63065598-63065617 | Msa0863280:intron | 25.0% |
| ! | CAAGTGATAAAGAAAAAAAC+AGG | - | chr5_4:63065793-63065812 | None:intergenic | 25.0% |
| ! | CTATTTAACAACACTGTTAT+AGG | - | chr5_4:63066110-63066129 | None:intergenic | 25.0% |
| ! | TACAAAATGTTGTCAAATAG+CGG | + | chr5_4:63066204-63066223 | Msa0863280:intron | 25.0% |
| ! | ATGATAACTATGTGTTGAAT+CGG | - | chr5_4:63066900-63066919 | None:intergenic | 25.0% |
| ! | ACTTGGATAAGATTGAAAAT+GGG | - | chr5_4:63067440-63067459 | None:intergenic | 25.0% |
| ! | AACTTGGATAAGATTGAAAA+TGG | - | chr5_4:63067441-63067460 | None:intergenic | 25.0% |
| !!! | TGTTTTGGGAATTTAATGAA+TGG | - | chr5_4:63067561-63067580 | None:intergenic | 25.0% |
| !! | TTTTGTGTAAAAATTGGTAC+TGG | + | chr5_4:63067801-63067820 | Msa0863280:three_prime_UTR | 25.0% |
| ! | TGAAAATCATGAAATTTGTC+TGG | + | chr5_4:63067904-63067923 | Msa0863280:intron | 25.0% |
| CATTCATGCACAATAACTTT+GGG | - | chr5_4:63064980-63064999 | None:intergenic | 30.0% | |
| !!! | CAACACAATATTTTGATAGC+CGG | - | chr5_4:63065151-63065170 | None:intergenic | 30.0% |
| !!! | TATACGAAATTTTGACTGCA+TGG | - | chr5_4:63065268-63065287 | None:intergenic | 30.0% |
| ! | GCATTGACAAATCAATAGAT+AGG | + | chr5_4:63065338-63065357 | Msa0863280:intron | 30.0% |
| !!! | CAAACGACTCATTTTAAGTT+TGG | + | chr5_4:63065466-63065485 | Msa0863280:intron | 30.0% |
| !!! | CATTTTAAGTTTGGTGAATC+TGG | + | chr5_4:63065475-63065494 | Msa0863280:intron | 30.0% |
| !! | CGAACAACTCATTTTAAGAA+AGG | + | chr5_4:63065590-63065609 | Msa0863280:intron | 30.0% |
| ATAACCAATCAAACTATGTC+AGG | - | chr5_4:63065831-63065850 | None:intergenic | 30.0% | |
| ! | GATTTGCTTTGAATGTGTTT+GGG | + | chr5_4:63065970-63065989 | Msa0863280:CDS | 30.0% |
| TTGTTAAATAGCAGCTATAG+CGG | + | chr5_4:63066119-63066138 | Msa0863280:intron | 30.0% | |
| ACAAAATGTTGTCAAATAGC+GGG | + | chr5_4:63066205-63066224 | Msa0863280:intron | 30.0% | |
| TAATATTTCGCAAGGCAATA+GGG | - | chr5_4:63066247-63066266 | None:intergenic | 30.0% | |
| TTAATATTTCGCAAGGCAAT+AGG | - | chr5_4:63066248-63066267 | None:intergenic | 30.0% | |
| CTTCTATCACATAACTTTCT+TGG | + | chr5_4:63066294-63066313 | Msa0863280:intron | 30.0% | |
| !!! | ATATTTCTGACCTTTTTTGC+AGG | + | chr5_4:63066356-63066375 | Msa0863280:intron | 30.0% |
| AGAAACAGAAATATGCAGTA+TGG | + | chr5_4:63066607-63066626 | Msa0863280:CDS | 30.0% | |
| !! | ATAAGAAAGGCTTTGAAAGA+AGG | + | chr5_4:63066642-63066661 | Msa0863280:CDS | 30.0% |
| TATATATTACTAGGAGAGCT+CGG | - | chr5_4:63066720-63066739 | None:intergenic | 30.0% | |
| GTATGATTCAAAACTCAACT+CGG | + | chr5_4:63066741-63066760 | Msa0863280:intron | 30.0% | |
| !! | TTAAGAGTGTCGTTGAATTT+AGG | - | chr5_4:63066965-63066984 | None:intergenic | 30.0% |
| ATCTTTGCAGTTTCATGATA+GGG | + | chr5_4:63067012-63067031 | Msa0863280:CDS | 30.0% | |
| CTTGGATAAGATTGAAAATG+GGG | - | chr5_4:63067439-63067458 | None:intergenic | 30.0% | |
| TGATAATAAGTGTGGTTTAC+TGG | - | chr5_4:63067490-63067509 | None:intergenic | 30.0% | |
| GTAAACCACACTTATTATCA+AGG | + | chr5_4:63067490-63067509 | Msa0863280:CDS | 30.0% | |
| !! | AAAATTGGTACTGGTATGAA+TGG | + | chr5_4:63067810-63067829 | Msa0863280:three_prime_UTR | 30.0% |
| ! | TTCGTGTTTCTGCAATTCAT+CGG | - | chr5_4:63064658-63064677 | None:intergenic | 35.0% |
| TTACAGTAATAAGCAACGAG+AGG | - | chr5_4:63064681-63064700 | None:intergenic | 35.0% | |
| TTTAGGTCGTTTATATGCGA+TGG | + | chr5_4:63064782-63064801 | Msa0863280:intron | 35.0% | |
| !!! | AAGAAGAGCATTGGTAGTTT+TGG | - | chr5_4:63064841-63064860 | None:intergenic | 35.0% |
| TCTCATGAAACAGCTTGAAA+AGG | + | chr5_4:63064866-63064885 | Msa0863280:CDS | 35.0% | |
| CCATTCATGCACAATAACTT+TGG | - | chr5_4:63064981-63065000 | None:intergenic | 35.0% | |
| CCAAAGTTATTGTGCATGAA+TGG | + | chr5_4:63064978-63064997 | Msa0863280:intron | 35.0% | |
| ! | ACATGAATGCGTGATTTTCT+TGG | - | chr5_4:63065415-63065434 | None:intergenic | 35.0% |
| CATTCATGTTGTTGCTATGT+TGG | + | chr5_4:63065426-63065445 | Msa0863280:intron | 35.0% | |
| TGTTGCTATGTTGGAACTTA+AGG | + | chr5_4:63065435-63065454 | Msa0863280:intron | 35.0% | |
| ! | CATGAATGTGTGCTTTTCAT+AGG | - | chr5_4:63065540-63065559 | None:intergenic | 35.0% |
| GTTGTTCGATCTTCATTCAA+AGG | - | chr5_4:63065578-63065597 | None:intergenic | 35.0% | |
| GATAAAAAGGGACTCAAGTT+GGG | + | chr5_4:63065921-63065940 | Msa0863280:CDS | 35.0% | |
| ! | ATAAAAAGGGACTCAAGTTG+GGG | + | chr5_4:63065922-63065941 | Msa0863280:CDS | 35.0% |
| ! | GGATTTGCTTTGAATGTGTT+TGG | + | chr5_4:63065969-63065988 | Msa0863280:CDS | 35.0% |
| CACTGTTATAGGCATAACAA+AGG | - | chr5_4:63066099-63066118 | None:intergenic | 35.0% | |
| TTGTACTAAATAGCGTGTCA+CGG | - | chr5_4:63066189-63066208 | None:intergenic | 35.0% | |
| AATATTTCGCAAGGCAATAG+GGG | - | chr5_4:63066246-63066265 | None:intergenic | 35.0% | |
| CGGATTGTTAATATTTCGCA+AGG | - | chr5_4:63066255-63066274 | None:intergenic | 35.0% | |
| TGCATTGAAGTACATACATC+AGG | - | chr5_4:63066451-63066470 | None:intergenic | 35.0% | |
| AAGTTGTTGCCATATAAGAC+AGG | - | chr5_4:63066521-63066540 | None:intergenic | 35.0% | |
| TGTCTTATATGGCAACAACT+TGG | + | chr5_4:63066520-63066539 | Msa0863280:intron | 35.0% | |
| GTCTTATATGGCAACAACTT+GGG | + | chr5_4:63066521-63066540 | Msa0863280:intron | 35.0% | |
| TCTTATATGGCAACAACTTG+GGG | + | chr5_4:63066522-63066541 | Msa0863280:intron | 35.0% | |
| GAAAGCAGCTGATATAAGAA+AGG | + | chr5_4:63066629-63066648 | Msa0863280:CDS | 35.0% | |
| ATTCAACTGTTTATTCCTGC+AGG | + | chr5_4:63066829-63066848 | Msa0863280:intron | 35.0% | |
| TGTTTATTCCTGCAGGATAT+TGG | + | chr5_4:63066836-63066855 | Msa0863280:intron | 35.0% | |
| GTTTATTCCTGCAGGATATT+GGG | + | chr5_4:63066837-63066856 | Msa0863280:intron | 35.0% | |
| CTATCATGAAACTGCAAAGA+TGG | - | chr5_4:63067013-63067032 | None:intergenic | 35.0% | |
| CATCTTTGCAGTTTCATGAT+AGG | + | chr5_4:63067011-63067030 | Msa0863280:CDS | 35.0% | |
| ! | ACTGATCTTGTGAGTATTGT+TGG | - | chr5_4:63067360-63067379 | None:intergenic | 35.0% |
| CAAGATCAGTCACAGAATTT+AGG | + | chr5_4:63067370-63067389 | Msa0863280:CDS | 35.0% | |
| ! | AATGAATGGTTTGTAGTCAG+AGG | - | chr5_4:63067547-63067566 | None:intergenic | 35.0% |
| ! | TTCTCTCCGAGAATTTTCCA+TGG | + | chr5_4:63064587-63064606 | Msa0863280:exon | 40.0% |
| ! | CGTTGAAGGTATGGTAACAA+AGG | - | chr5_4:63064633-63064652 | None:intergenic | 40.0% |
| CGTTTATATGCGATGGAAAG+AGG | + | chr5_4:63064789-63064808 | Msa0863280:CDS | 40.0% | |
| ! | GAGAGAAACAAGAAGAGCAT+TGG | - | chr5_4:63064850-63064869 | None:intergenic | 40.0% |
| CTTGTAACGTGACAAATCCA+CGG | - | chr5_4:63065026-63065045 | None:intergenic | 40.0% | |
| TGAGTGCATGTTTGGTATCA+CGG | - | chr5_4:63065123-63065142 | None:intergenic | 40.0% | |
| GGATAAAAAGGGACTCAAGT+TGG | + | chr5_4:63065920-63065939 | Msa0863280:intron | 40.0% | |
| GCTATATCGCTAAATCGTAG+TGG | + | chr5_4:63066143-63066162 | Msa0863280:intron | 40.0% | |
| !! | TTGTCAAATAGCGGGTATAG+TGG | + | chr5_4:63066213-63066232 | Msa0863280:intron | 40.0% |
| !! | GATAGAAGTGCTGTCAATCT+GGG | - | chr5_4:63066282-63066301 | None:intergenic | 40.0% |
| !! | TGATAGAAGTGCTGTCAATC+TGG | - | chr5_4:63066283-63066302 | None:intergenic | 40.0% |
| TGGCTGTATTCCTGCAAAAA+AGG | - | chr5_4:63066369-63066388 | None:intergenic | 40.0% | |
| ! | GCTAGCAGCGTAAAATGTTT+TGG | - | chr5_4:63066389-63066408 | None:intergenic | 40.0% |
| ! | AGTTGCTAGCCTGTCTTATA+TGG | + | chr5_4:63066509-63066528 | Msa0863280:intron | 40.0% |
| !! | TTCCGAGTTTATTTTCCAGC+TGG | + | chr5_4:63066581-63066600 | Msa0863280:intron | 40.0% |
| CTCCAGCTGGAAAATAAACT+CGG | - | chr5_4:63066586-63066605 | None:intergenic | 40.0% | |
| !! | GAAAGGCTTTGAAAGAAGGA+AGG | + | chr5_4:63066646-63066665 | Msa0863280:CDS | 40.0% |
| ACTACTGAAACTTCTGCTTC+TGG | + | chr5_4:63066860-63066879 | Msa0863280:CDS | 40.0% | |
| TCATGAAACTGCAAAGATGG+TGG | - | chr5_4:63067010-63067029 | None:intergenic | 40.0% | |
| !! | GTGAGATGATGGAGAAACAA+CGG | - | chr5_4:63067059-63067078 | None:intergenic | 40.0% |
| GGTGTATAAGAGTGAGATGA+TGG | - | chr5_4:63067070-63067089 | None:intergenic | 40.0% | |
| TCATCTCACTCTTATACACC+TGG | + | chr5_4:63067070-63067089 | Msa0863280:CDS | 40.0% | |
| TGATGATAATCCTGGGAAGA+TGG | - | chr5_4:63067127-63067146 | None:intergenic | 40.0% | |
| TGATAATCTTGAGAAGGTGG+AGG | - | chr5_4:63067259-63067278 | None:intergenic | 40.0% | |
| !! | GGTTGATAATCTTGAGAAGG+TGG | - | chr5_4:63067262-63067281 | None:intergenic | 40.0% |
| TAAGAACTGTCTGATCTTGC+AGG | - | chr5_4:63067319-63067338 | None:intergenic | 40.0% | |
| !! | AGTATTGTTGGTGGTTGTAG+GGG | - | chr5_4:63067348-63067367 | None:intergenic | 40.0% |
| !! | GAGTATTGTTGGTGGTTGTA+GGG | - | chr5_4:63067349-63067368 | None:intergenic | 40.0% |
| !! | TGAGTATTGTTGGTGGTTGT+AGG | - | chr5_4:63067350-63067369 | None:intergenic | 40.0% |
| ! | GATCTTGTGAGTATTGTTGG+TGG | - | chr5_4:63067357-63067376 | None:intergenic | 40.0% |
| GTTTCGTGAGAAGGGTAATT+AGG | - | chr5_4:63067397-63067416 | None:intergenic | 40.0% | |
| TGAAAATGGGGAAGAGAGTA+AGG | - | chr5_4:63067427-63067446 | None:intergenic | 40.0% | |
| ! | AGGCTGCTTTCTGTAAAACT+TGG | - | chr5_4:63067457-63067476 | None:intergenic | 40.0% |
| ! | TGGGAAGAATATGAAGCATC+GGG | - | chr5_4:63067517-63067536 | None:intergenic | 40.0% |
| CTGGGAAGAATATGAAGCAT+CGG | - | chr5_4:63067518-63067537 | None:intergenic | 40.0% | |
| CTACTGTCATACTGGTATGT+CGG | - | chr5_4:63067631-63067650 | None:intergenic | 40.0% | |
| !! | AAAGCTGCAAGATTTGCTGT+TGG | + | chr5_4:63067688-63067707 | Msa0863280:CDS | 40.0% |
| !! | AAGCTGCAAGATTTGCTGTT+GGG | + | chr5_4:63067689-63067708 | Msa0863280:CDS | 40.0% |
| TTGCTAACAAACCCATCAGT+TGG | + | chr5_4:63067769-63067788 | Msa0863280:CDS | 40.0% | |
| AATCTTACTGGCCAACTGAT+GGG | - | chr5_4:63067783-63067802 | None:intergenic | 40.0% | |
| AAATCTTACTGGCCAACTGA+TGG | - | chr5_4:63067784-63067803 | None:intergenic | 40.0% | |
| ! | TGAGATTGGTGTCTTTGTCA+AGG | + | chr5_4:63067954-63067973 | Msa0863280:three_prime_UTR | 40.0% |
| ! | GAGATTGGTGTCTTTGTCAA+GGG | + | chr5_4:63067955-63067974 | Msa0863280:three_prime_UTR | 40.0% |
| ! | AGATTGGTGTCTTTGTCAAG+GGG | + | chr5_4:63067956-63067975 | Msa0863280:three_prime_UTR | 40.0% |
| ! | TCTCCGAGAATTTTCCATGG+CGG | + | chr5_4:63064590-63064609 | Msa0863280:exon | 45.0% |
| TCTCCGCCATGGAAAATTCT+CGG | - | chr5_4:63064596-63064615 | None:intergenic | 45.0% | |
| TATGGTAACAAAGGCTTCGC+TGG | - | chr5_4:63064624-63064643 | None:intergenic | 45.0% | |
| ATGCGATGGAAAGAGGATTG+AGG | + | chr5_4:63064796-63064815 | Msa0863280:CDS | 45.0% | |
| !! | GTTTTGGTGCGTTCACTTTG+TGG | - | chr5_4:63064825-63064844 | None:intergenic | 45.0% |
| GTGCATGTTTAGTATCACCG+TGG | + | chr5_4:63065006-63065025 | Msa0863280:intron | 45.0% | |
| GTGATACCAAACATGCACTC+AGG | + | chr5_4:63065122-63065141 | Msa0863280:intron | 45.0% | |
| CAAACATGCACTCAGGTTTC+CGG | + | chr5_4:63065129-63065148 | Msa0863280:intron | 45.0% | |
| ATAGGAAACACTGCAGTCAG+CGG | - | chr5_4:63065522-63065541 | None:intergenic | 45.0% | |
| !! | GCTGTTTGATTTTCATCCGC+TGG | + | chr5_4:63065627-63065646 | Msa0863280:intron | 45.0% |
| AAGTCAGTGTATTGAGCCAG+CGG | - | chr5_4:63065646-63065665 | None:intergenic | 45.0% | |
| AGCGCCTGACATAGTTTGAT+TGG | + | chr5_4:63065824-63065843 | Msa0863280:intron | 45.0% | |
| AATAGCGTGTCACGGAATAG+CGG | - | chr5_4:63066181-63066200 | None:intergenic | 45.0% | |
| !! | ATTTCTGTTTCTGCTCCAGC+TGG | - | chr5_4:63066599-63066618 | None:intergenic | 45.0% |
| AAACTTCTGCTTCTGGTGCT+GGG | + | chr5_4:63066867-63066886 | Msa0863280:CDS | 45.0% | |
| GCAGATTCTGGTAGTTGACA+GGG | - | chr5_4:63066925-63066944 | None:intergenic | 45.0% | |
| TCGTTGAATTTAGGTGCAGG+AGG | - | chr5_4:63066956-63066975 | None:intergenic | 45.0% | |
| ! | GTGTCGTTGAATTTAGGTGC+AGG | - | chr5_4:63066959-63066978 | None:intergenic | 45.0% |
| TCTTGGGAAGGATAAACTCC+AGG | - | chr5_4:63067091-63067110 | None:intergenic | 45.0% | |
| TGATAATCCTGGGAAGATGG+AGG | - | chr5_4:63067124-63067143 | None:intergenic | 45.0% | |
| ! | TGGTGGGTGATGATAATCCT+GGG | - | chr5_4:63067134-63067153 | None:intergenic | 45.0% |
| TGGAGGAGGATGGTATTCTT+GGG | - | chr5_4:63067161-63067180 | None:intergenic | 45.0% | |
| TGGAGGAGGATGGTATTCTT+GGG | - | chr5_4:63067161-63067180 | None:intergenic | 45.0% | |
| TAATCTTGAGAAGGTGGAGG+AGG | - | chr5_4:63067256-63067275 | None:intergenic | 45.0% | |
| !! | GGGGGTTGATAATCTTGAGA+AGG | - | chr5_4:63067265-63067284 | None:intergenic | 45.0% |
| TGATGGTAATCTTGGGATGG+TGG | - | chr5_4:63067289-63067308 | None:intergenic | 45.0% | |
| TGGAGGCTGATGGTAATCTT+GGG | - | chr5_4:63067296-63067315 | None:intergenic | 45.0% | |
| AATGGGGAAGAGAGTAAGGA+GGG | - | chr5_4:63067423-63067442 | None:intergenic | 45.0% | |
| AAATGGGGAAGAGAGTAAGG+AGG | - | chr5_4:63067424-63067443 | None:intergenic | 45.0% | |
| ! | CGGGACCTTGATAATAAGTG+TGG | - | chr5_4:63067498-63067517 | None:intergenic | 45.0% |
| ! | TCTGCTGCTGGAACTGTTTT+GGG | - | chr5_4:63067575-63067594 | None:intergenic | 45.0% |
| ! | TTCTGCTGCTGGAACTGTTT+TGG | - | chr5_4:63067576-63067595 | None:intergenic | 45.0% |
| AACAGTTCCAGCAGCAGAAA+AGG | + | chr5_4:63067577-63067596 | Msa0863280:CDS | 45.0% | |
| !! | TATGTCGGAGTTGTTGGCTT+GGG | - | chr5_4:63067616-63067635 | None:intergenic | 45.0% |
| TACTGGTATGTCGGAGTTGT+TGG | - | chr5_4:63067622-63067641 | None:intergenic | 45.0% | |
| GCTGGTAACTACTGTCATAC+TGG | - | chr5_4:63067639-63067658 | None:intergenic | 45.0% | |
| ! | TCTGCTATTCTTTCAGGTGG+AGG | - | chr5_4:63067661-63067680 | None:intergenic | 45.0% |
| TCCACCTGAAAGAATAGCAG+AGG | + | chr5_4:63067660-63067679 | Msa0863280:CDS | 45.0% | |
| TGTGCCTCTGCTATTCTTTC+AGG | - | chr5_4:63067667-63067686 | None:intergenic | 45.0% | |
| !! | AGCTGCAAGATTTGCTGTTG+GGG | + | chr5_4:63067690-63067709 | Msa0863280:CDS | 45.0% |
| CGGAAACCTGAGTGCATGTT+TGG | - | chr5_4:63065131-63065150 | None:intergenic | 50.0% | |
| ! | GTGCTGTCAATCTGGGATAG+CGG | - | chr5_4:63066275-63066294 | None:intergenic | 50.0% |
| GAAAGAAGGAAGGAAGCCTG+TGG | + | chr5_4:63066656-63066675 | Msa0863280:CDS | 50.0% | |
| CAGTAGTCCCAATATCCTGC+AGG | - | chr5_4:63066847-63066866 | None:intergenic | 50.0% | |
| GAAACTTCTGCTTCTGGTGC+TGG | + | chr5_4:63066866-63066885 | Msa0863280:CDS | 50.0% | |
| GGCAGATTCTGGTAGTTGAC+AGG | - | chr5_4:63066926-63066945 | None:intergenic | 50.0% | |
| GAGGAATGCTTGGCAGATTC+TGG | - | chr5_4:63066937-63066956 | None:intergenic | 50.0% | |
| TTAGGTGCAGGAGGAATGCT+TGG | - | chr5_4:63066947-63066966 | None:intergenic | 50.0% | |
| TGGAGGAGGATGGTAGTCTT+GGG | - | chr5_4:63067107-63067126 | None:intergenic | 50.0% | |
| ATGGAGGAGGATGGTAGTCT+TGG | - | chr5_4:63067108-63067127 | None:intergenic | 50.0% | |
| TAATCCTGGGAAGATGGAGG+AGG | - | chr5_4:63067121-63067140 | None:intergenic | 50.0% | |
| !! | GTGGTGGGTGATGATAATCC+TGG | - | chr5_4:63067135-63067154 | None:intergenic | 50.0% |
| GGTATTCTTGGGAAGGTGGT+GGG | - | chr5_4:63067150-63067169 | None:intergenic | 50.0% | |
| TGGTATTCTTGGGAAGGTGG+TGG | - | chr5_4:63067151-63067170 | None:intergenic | 50.0% | |
| GGATGGTATTCTTGGGAAGG+TGG | - | chr5_4:63067154-63067173 | None:intergenic | 50.0% | |
| GGAGGATGGTATTCTTGGGA+AGG | - | chr5_4:63067157-63067176 | None:intergenic | 50.0% | |
| GTGGAGGAGGATGGTATTCT+TGG | - | chr5_4:63067162-63067181 | None:intergenic | 50.0% | |
| TATTCTTGGGAAGGTGGAGG+AGG | - | chr5_4:63067175-63067194 | None:intergenic | 50.0% | |
| TGGTATTCTTGGGAAGGTGG+AGG | - | chr5_4:63067151-63067170 | None:intergenic | 50.0% | |
| GGATGGTATTCTTGGGAAGG+TGG | - | chr5_4:63067154-63067173 | None:intergenic | 50.0% | |
| GGAGGATGGTATTCTTGGGA+AGG | - | chr5_4:63067157-63067176 | None:intergenic | 50.0% | |
| GTGGAGGAGGATGGTATTCT+TGG | - | chr5_4:63067162-63067181 | None:intergenic | 50.0% | |
| TAATCTTGGGAAGGTGGAGG+AGG | - | chr5_4:63067202-63067221 | None:intergenic | 50.0% | |
| TGGTAATCTTGGGAAGGTGG+AGG | - | chr5_4:63067205-63067224 | None:intergenic | 50.0% | |
| GGATGGTAATCTTGGGAAGG+TGG | - | chr5_4:63067208-63067227 | None:intergenic | 50.0% | |
| GGAGGATGGTAATCTTGGGA+AGG | - | chr5_4:63067211-63067230 | None:intergenic | 50.0% | |
| TGGCGGAGGATGGTAATCTT+GGG | - | chr5_4:63067215-63067234 | None:intergenic | 50.0% | |
| ! | ATGGCGGAGGATGGTAATCT+TGG | - | chr5_4:63067216-63067235 | None:intergenic | 50.0% |
| TGGTAATCCTGGGAAGATGG+CGG | - | chr5_4:63067232-63067251 | None:intergenic | 50.0% | |
| GGATGGTAATCCTGGGAAGA+TGG | - | chr5_4:63067235-63067254 | None:intergenic | 50.0% | |
| TGGAGGAGGATGGTAATCCT+GGG | - | chr5_4:63067242-63067261 | None:intergenic | 50.0% | |
| !! | TAATCTTGGGATGGTGGAGG+GGG | - | chr5_4:63067283-63067302 | None:intergenic | 50.0% |
| !! | GTAATCTTGGGATGGTGGAG+GGG | - | chr5_4:63067284-63067303 | None:intergenic | 50.0% |
| !! | GGTAATCTTGGGATGGTGGA+GGG | - | chr5_4:63067285-63067304 | None:intergenic | 50.0% |
| ! | TGGTAATCTTGGGATGGTGG+AGG | - | chr5_4:63067286-63067305 | None:intergenic | 50.0% |
| GGCTGATGGTAATCTTGGGA+TGG | - | chr5_4:63067292-63067311 | None:intergenic | 50.0% | |
| GTGGAGGCTGATGGTAATCT+TGG | - | chr5_4:63067297-63067316 | None:intergenic | 50.0% | |
| GAACTGTCTGATCTTGCAGG+TGG | - | chr5_4:63067316-63067335 | None:intergenic | 50.0% | |
| ATGGGGAAGAGAGTAAGGAG+GGG | - | chr5_4:63067422-63067441 | None:intergenic | 50.0% | |
| TACAGAAAGCAGCCTACCGT+CGG | + | chr5_4:63067462-63067481 | Msa0863280:CDS | 50.0% | |
| ! | GTGTGGTTTACTGGTACCGA+CGG | - | chr5_4:63067481-63067500 | None:intergenic | 50.0% |
| TGTAGTCAGAGGAGCTGACT+GGG | - | chr5_4:63067536-63067555 | None:intergenic | 50.0% | |
| TTGTAGTCAGAGGAGCTGAC+TGG | - | chr5_4:63067537-63067556 | None:intergenic | 50.0% | |
| ! | GACAGTACCTTTTCTGCTGC+TGG | - | chr5_4:63067587-63067606 | None:intergenic | 50.0% |
| !! | CAGCAGAAAAGGTACTGTCC+CGG | + | chr5_4:63067588-63067607 | Msa0863280:CDS | 50.0% |
| ! | GTATGTCGGAGTTGTTGGCT+TGG | - | chr5_4:63067617-63067636 | None:intergenic | 50.0% |
| ! | CTATTCTTTCAGGTGGAGGC+TGG | - | chr5_4:63067657-63067676 | None:intergenic | 50.0% |
| GCCTCTGCTATTCTTTCAGG+TGG | - | chr5_4:63067664-63067683 | None:intergenic | 50.0% | |
| !! | AAGATTTGCTGTTGGGGCAC+TGG | + | chr5_4:63067696-63067715 | Msa0863280:CDS | 50.0% |
| TCATCGGCGCGTTGAAGGTA+TGG | - | chr5_4:63064642-63064661 | None:intergenic | 55.0% | |
| GCAATTCATCGGCGCGTTGA+AGG | - | chr5_4:63064647-63064666 | None:intergenic | 55.0% | |
| GCAGACAAGCAAGATCGTGC+TGG | + | chr5_4:63065996-63066015 | Msa0863280:CDS | 55.0% | |
| ! | GGAGGATGGTAGTCTTGGGA+AGG | - | chr5_4:63067103-63067122 | None:intergenic | 55.0% |
| ! | TAATCCTGGGAAGATGGCGG+AGG | - | chr5_4:63067229-63067248 | None:intergenic | 55.0% |
| GTGGAGGAGGATGGTAATCC+TGG | - | chr5_4:63067243-63067262 | None:intergenic | 55.0% | |
| CTTGAGAAGGTGGAGGAGGA+TGG | - | chr5_4:63067252-63067271 | None:intergenic | 55.0% | |
| ATCTTGCAGGTGGAGGCTGA+TGG | - | chr5_4:63067306-63067325 | None:intergenic | 55.0% | |
| CTGTCTGATCTTGCAGGTGG+AGG | - | chr5_4:63067313-63067332 | None:intergenic | 55.0% | |
| GAGGGGGAGTTTCGTGAGAA+GGG | - | chr5_4:63067405-63067424 | None:intergenic | 55.0% | |
| TGGGGAAGAGAGTAAGGAGG+GGG | - | chr5_4:63067421-63067440 | None:intergenic | 55.0% | |
| !! | GGTTTACTGGTACCGACGGT+AGG | - | chr5_4:63067477-63067496 | None:intergenic | 55.0% |
| !! | GAGTTGTTGGCTTGGGTTCC+GGG | - | chr5_4:63067609-63067628 | None:intergenic | 55.0% |
| !! | GGAGTTGTTGGCTTGGGTTC+CGG | - | chr5_4:63067610-63067629 | None:intergenic | 55.0% |
| GAAGGAAGGAAGCCTGTGGC+TGG | + | chr5_4:63066660-63066679 | Msa0863280:CDS | 60.0% | |
| ACTAGGAGAGCTCGGCAGAG+CGG | - | chr5_4:63066712-63066731 | None:intergenic | 60.0% | |
| CCTGGGAAGATGGAGGAGGA+TGG | - | chr5_4:63067117-63067136 | None:intergenic | 60.0% | |
| CCATCCTCCTCCATCTTCCC+AGG | + | chr5_4:63067114-63067133 | Msa0863280:CDS | 60.0% | |
| CTTGGGAAGGTGGAGGAGGA+TGG | - | chr5_4:63067171-63067190 | None:intergenic | 60.0% | |
| CTTGGGAAGGTGGAGGAGGA+TGG | - | chr5_4:63067171-63067190 | None:intergenic | 60.0% | |
| GGAGGGGGAGTTTCGTGAGA+AGG | - | chr5_4:63067406-63067425 | None:intergenic | 60.0% | |
| !! | CGCTGGTTCGTTCTCCGCCA+TGG | - | chr5_4:63064607-63064626 | None:intergenic | 65.0% |
| GGTCCTCGTCACCAGCAGGT+GGG | - | chr5_4:63066686-63066705 | None:intergenic | 65.0% | |
| AGGTCCTCGTCACCAGCAGG+TGG | - | chr5_4:63066687-63066706 | None:intergenic | 65.0% | |
| GACAGGTCCTCGTCACCAGC+AGG | - | chr5_4:63066690-63066709 | None:intergenic | 65.0% | |
| !! | CCTGGGAAGATGGCGGAGGA+TGG | - | chr5_4:63067225-63067244 | None:intergenic | 65.0% |
| CCATCCTCCGCCATCTTCCC+AGG | + | chr5_4:63067222-63067241 | Msa0863280:CDS | 65.0% | |
| ! | TGGCCCACCTGCTGGTGACG+AGG | + | chr5_4:63066680-63066699 | Msa0863280:CDS | 70.0% |
| GAGAGCTCGGCAGAGCGGAC+AGG | - | chr5_4:63066707-63066726 | None:intergenic | 70.0% | |
| CCAGCAGGTGGGCCAGCCAC+AGG | - | chr5_4:63066675-63066694 | None:intergenic | 75.0% | |
| ! | CCTGTGGCTGGCCCACCTGC+TGG | + | chr5_4:63066672-63066691 | Msa0863280:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 63064541 | 63068014 | 63064541 | ID=Msa0863280;Name=Msa0863280 |
| chr5_4 | mRNA | 63064541 | 63068014 | 63064541 | ID=Msa0863280-mRNA-1;Parent=Msa0863280;Name=Msa0863280-mRNA-1;_AED=0.04;_eAED=0.04;_QI=65|1|1|1|0.83|0.71|7|191|488 |
| chr5_4 | exon | 63064541 | 63064696 | 63064541 | ID=Msa0863280-mRNA-1:exon:19760;Parent=Msa0863280-mRNA-1 |
| chr5_4 | exon | 63064787 | 63064887 | 63064787 | ID=Msa0863280-mRNA-1:exon:19761;Parent=Msa0863280-mRNA-1 |
| chr5_4 | exon | 63065921 | 63066030 | 63065921 | ID=Msa0863280-mRNA-1:exon:19762;Parent=Msa0863280-mRNA-1 |
| chr5_4 | exon | 63066378 | 63066453 | 63066378 | ID=Msa0863280-mRNA-1:exon:19763;Parent=Msa0863280-mRNA-1 |
| chr5_4 | exon | 63066600 | 63066740 | 63066600 | ID=Msa0863280-mRNA-1:exon:19764;Parent=Msa0863280-mRNA-1 |
| chr5_4 | exon | 63066851 | 63067916 | 63066851 | ID=Msa0863280-mRNA-1:exon:19765;Parent=Msa0863280-mRNA-1 |
| chr5_4 | exon | 63067942 | 63068014 | 63067942 | ID=Msa0863280-mRNA-1:exon:19766;Parent=Msa0863280-mRNA-1 |
| chr5_4 | five_prime_UTR | 63064541 | 63064605 | 63064541 | ID=Msa0863280-mRNA-1:five_prime_utr;Parent=Msa0863280-mRNA-1 |
| chr5_4 | CDS | 63064606 | 63064696 | 63064606 | ID=Msa0863280-mRNA-1:cds;Parent=Msa0863280-mRNA-1 |
| chr5_4 | CDS | 63064787 | 63064887 | 63064787 | ID=Msa0863280-mRNA-1:cds;Parent=Msa0863280-mRNA-1 |
| chr5_4 | CDS | 63065921 | 63066030 | 63065921 | ID=Msa0863280-mRNA-1:cds;Parent=Msa0863280-mRNA-1 |
| chr5_4 | CDS | 63066378 | 63066453 | 63066378 | ID=Msa0863280-mRNA-1:cds;Parent=Msa0863280-mRNA-1 |
| chr5_4 | CDS | 63066600 | 63066740 | 63066600 | ID=Msa0863280-mRNA-1:cds;Parent=Msa0863280-mRNA-1 |
| chr5_4 | CDS | 63066851 | 63067798 | 63066851 | ID=Msa0863280-mRNA-1:cds;Parent=Msa0863280-mRNA-1 |
| chr5_4 | three_prime_UTR | 63067799 | 63067916 | 63067799 | ID=Msa0863280-mRNA-1:three_prime_utr;Parent=Msa0863280-mRNA-1 |
| chr5_4 | three_prime_UTR | 63067942 | 63068014 | 63067942 | ID=Msa0863280-mRNA-1:three_prime_utr;Parent=Msa0863280-mRNA-1 |
| Gene Sequence |
| Protein sequence |
