Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0785440 | RHN57038.1 | 93.056 | 504 | 7 | 1 | 1 | 476 | 113 | 616 | 0.0 | 974 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0785440 | sp|Q0WSN2|DAR2_ARATH | 62.109 | 512 | 147 | 9 | 8 | 476 | 21 | 528 | 0.0 | 605 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0785440 | A0A396HX06 | 93.056 | 504 | 7 | 1 | 1 | 476 | 113 | 616 | 0.0 | 974 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0785440 | TR | Others |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0737810 | Msa0785440 | 0.813816 | 2.113697e-51 | -8.615850e-47 |
| Msa0785440 | Msa0817280 | 0.818580 | 1.819846e-52 | -8.615850e-47 |
| Msa0785440 | Msa0857540 | 0.825075 | 5.711106e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0785440 | MtrunA17_Chr5g0436051 | 93.056 | 504 | 7 | 1 | 1 | 476 | 113 | 616 | 0.0 | 974 |
| Msa0785440 | MtrunA17_Chr3g0112601 | 68.665 | 517 | 117 | 6 | 1 | 476 | 1 | 513 | 0.0 | 703 |
| Msa0785440 | MtrunA17_Chr1g0154501 | 49.269 | 479 | 197 | 8 | 32 | 475 | 1 | 468 | 3.47e-156 | 451 |
| Msa0785440 | MtrunA17_Chr8g0373781 | 48.321 | 536 | 180 | 10 | 32 | 475 | 1 | 531 | 4.58e-154 | 448 |
| Msa0785440 | MtrunA17_Chr5g0403301 | 57.475 | 301 | 100 | 3 | 182 | 475 | 27 | 306 | 1.75e-116 | 344 |
| Msa0785440 | MtrunA17_Chr5g0403261 | 34.239 | 368 | 133 | 8 | 32 | 292 | 1 | 366 | 2.71e-60 | 201 |
| Msa0785440 | MtrunA17_Chr5g0403271 | 64.706 | 153 | 49 | 1 | 328 | 475 | 1 | 153 | 1.14e-59 | 192 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0785440 | AT2G39830.1 | 62.109 | 512 | 147 | 9 | 8 | 476 | 21 | 528 | 0.0 | 605 |
| Msa0785440 | AT2G39830.2 | 61.748 | 515 | 147 | 10 | 8 | 476 | 21 | 531 | 0.0 | 599 |
| Msa0785440 | AT2G39830.3 | 61.690 | 509 | 145 | 9 | 8 | 476 | 21 | 519 | 0.0 | 596 |
| Msa0785440 | AT2G39830.4 | 59.524 | 420 | 127 | 8 | 8 | 388 | 21 | 436 | 1.08e-165 | 475 |
| Msa0785440 | AT4G36860.1 | 57.245 | 421 | 137 | 5 | 92 | 475 | 139 | 553 | 1.59e-158 | 461 |
| Msa0785440 | AT4G36860.3 | 57.245 | 421 | 137 | 5 | 92 | 475 | 163 | 577 | 6.09e-158 | 460 |
| Msa0785440 | AT1G19270.1 | 45.131 | 534 | 202 | 8 | 32 | 476 | 1 | 532 | 1.30e-150 | 440 |
| Msa0785440 | AT1G19270.2 | 45.131 | 534 | 202 | 8 | 32 | 476 | 1 | 532 | 1.30e-150 | 440 |
| Msa0785440 | AT4G36860.2 | 55.590 | 322 | 102 | 4 | 92 | 378 | 139 | 454 | 7.60e-117 | 351 |
| Msa0785440 | AT5G66620.1 | 48.596 | 356 | 154 | 3 | 142 | 468 | 285 | 640 | 3.98e-111 | 342 |
| Msa0785440 | AT5G66620.3 | 48.315 | 356 | 155 | 3 | 142 | 468 | 276 | 631 | 6.63e-111 | 342 |
| Msa0785440 | AT5G66620.4 | 48.315 | 356 | 155 | 3 | 142 | 468 | 276 | 631 | 6.63e-111 | 342 |
| Msa0785440 | AT5G66610.3 | 48.442 | 353 | 156 | 4 | 142 | 469 | 73 | 424 | 7.97e-108 | 327 |
| Msa0785440 | AT5G66610.1 | 48.442 | 353 | 156 | 4 | 142 | 469 | 200 | 551 | 6.20e-107 | 329 |
| Msa0785440 | AT5G66610.2 | 45.000 | 380 | 156 | 5 | 142 | 469 | 200 | 578 | 4.23e-101 | 315 |
| Msa0785440 | AT5G66630.1 | 45.225 | 356 | 163 | 5 | 142 | 468 | 346 | 698 | 1.13e-98 | 311 |
| Msa0785440 | AT5G66640.3 | 47.222 | 324 | 151 | 5 | 163 | 468 | 10 | 331 | 2.31e-95 | 292 |
| Msa0785440 | AT5G66640.1 | 47.222 | 324 | 151 | 5 | 163 | 468 | 117 | 438 | 5.71e-94 | 292 |
| Msa0785440 | AT5G66640.7 | 47.222 | 324 | 151 | 5 | 163 | 468 | 117 | 438 | 5.71e-94 | 292 |
| Msa0785440 | AT5G66640.4 | 47.222 | 324 | 151 | 5 | 163 | 468 | 148 | 469 | 1.44e-93 | 292 |
| Msa0785440 | AT5G66640.5 | 47.222 | 324 | 151 | 5 | 163 | 468 | 149 | 470 | 1.50e-93 | 292 |
| Msa0785440 | AT5G17890.1 | 44.904 | 363 | 162 | 6 | 143 | 468 | 1240 | 1601 | 1.72e-86 | 290 |
| Msa0785440 | AT5G66640.2 | 42.284 | 324 | 163 | 6 | 163 | 468 | 148 | 465 | 3.84e-77 | 249 |
| Msa0785440 | AT5G66640.6 | 42.284 | 324 | 163 | 6 | 163 | 468 | 149 | 466 | 3.98e-77 | 249 |
| Msa0785440 | AT5G66620.2 | 44.292 | 219 | 100 | 3 | 142 | 338 | 276 | 494 | 5.14e-59 | 202 |
Find 135 sgRNAs with CRISPR-Local
Find 267 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTCTCTCTGCCTTGAGTTT+TGG | 0.178098 | 5_2:+70461759 | None:intergenic |
| AGGCATAAACCTCTTGTTTC+TGG | 0.186251 | 5_2:+70462782 | None:intergenic |
| AATATGTGTATATACCTTTA+AGG | 0.205624 | 5_2:+70462282 | None:intergenic |
| GTCTCATGTTGAAAACAAAT+TGG | 0.214527 | 5_2:-70462036 | Msa0785440:CDS |
| ATAATCTATGGAAATTGTTT+AGG | 0.254459 | 5_2:-70464155 | Msa0785440:CDS |
| CTGTATTCATTGGGATAAAA+TGG | 0.256062 | 5_2:+70464292 | None:intergenic |
| AATGAAGCTGTTAATAAATA+TGG | 0.258522 | 5_2:-70461945 | Msa0785440:CDS |
| ACAGCAATTCTTGTTCTATA+TGG | 0.261118 | 5_2:-70462533 | Msa0785440:CDS |
| CATGAGATGGACAATACTTT+TGG | 0.265205 | 5_2:+70463271 | None:intergenic |
| CCCTCACTCTCCCACCCTTA+TGG | 0.270734 | 5_2:-70465929 | Msa0785440:exon |
| CATGCATGGTTACGCCTTAA+AGG | 0.286050 | 5_2:-70462296 | Msa0785440:intron |
| AGTATAGATGCCACCCCTTT+TGG | 0.293022 | 5_2:-70463296 | Msa0785440:CDS |
| GGAGAAAATGATGAAGATTA+TGG | 0.298017 | 5_2:-70464370 | Msa0785440:CDS |
| AATGATTCTTCTCCAGCTTA+TGG | 0.306927 | 5_2:-70461987 | Msa0785440:CDS |
| CTTTCTCATCCATGTATATA+TGG | 0.313577 | 5_2:-70465880 | Msa0785440:intron |
| ATTGGAGGCCATAGACTTAT+AGG | 0.316467 | 5_2:-70462599 | Msa0785440:CDS |
| AACTACCTCGCGCTCGGTAA+TGG | 0.338884 | 5_2:+70464076 | None:intergenic |
| ATCAAACCAGCAGCATTTAT+AGG | 0.343784 | 5_2:+70463321 | None:intergenic |
| GAAAGTCTGGTTTCATGAAA+TGG | 0.348540 | 5_2:-70465364 | Msa0785440:CDS |
| AACAAGAGGTTTATGCCTTT+CGG | 0.351720 | 5_2:-70462777 | Msa0785440:CDS |
| AAGGTTTCACCTGTATTCAT+TGG | 0.352606 | 5_2:+70464282 | None:intergenic |
| ACGACCACTCCTTCCTCTAT+TGG | 0.353168 | 5_2:+70465316 | None:intergenic |
| GTGCATGGAATCTGCTATAA+TGG | 0.356084 | 5_2:-70463038 | Msa0785440:CDS |
| ACTACCTCGCGCTCGGTAAT+GGG | 0.362527 | 5_2:+70464077 | None:intergenic |
| GGACACATGTTCTCTAAGTA+TGG | 0.363281 | 5_2:-70461867 | Msa0785440:three_prime_UTR |
| TAATCTATGGAAATTGTTTA+GGG | 0.366146 | 5_2:-70464154 | Msa0785440:CDS |
| AGTCTATGGCCTCCAATTCT+TGG | 0.369796 | 5_2:+70462605 | None:intergenic |
| GGTGGGAGAGTGAGGGGAGA+AGG | 0.371742 | 5_2:+70465936 | None:intergenic |
| CAGAAGGAGAAAGAGGATTT+AGG | 0.374040 | 5_2:-70464558 | Msa0785440:CDS |
| GCACTTAATGATGCTATTGT+TGG | 0.375277 | 5_2:-70462911 | Msa0785440:CDS |
| ATGAAACCAGACTTTCTCTC+TGG | 0.376624 | 5_2:+70465371 | None:intergenic |
| TTCTCATGCCTATAAGTCTA+TGG | 0.380772 | 5_2:+70462591 | None:intergenic |
| AACCTCTTGTTTCTGGCAAA+TGG | 0.381781 | 5_2:+70462789 | None:intergenic |
| AATAATAAGCTAAATACATT+AGG | 0.385158 | 5_2:+70461657 | None:intergenic |
| CATTAGCCCATCAAGGATAT+AGG | 0.386946 | 5_2:-70464399 | Msa0785440:intron |
| ATTGTTCTACAAGTGACTAT+TGG | 0.392656 | 5_2:-70461817 | Msa0785440:three_prime_UTR |
| ATGGCATGCAGGTTACTAAC+AGG | 0.396063 | 5_2:-70462344 | Msa0785440:intron |
| CTCGAACATATTCGTTTGAC+TGG | 0.400738 | 5_2:-70461909 | Msa0785440:CDS |
| CATAATAATCTCTGATTGAA+TGG | 0.404836 | 5_2:+70462990 | None:intergenic |
| CTGTAGTTGTGAAAGATTAG+AGG | 0.408619 | 5_2:-70463226 | Msa0785440:intron |
| TGCAATCAGGAGATAATCTA+TGG | 0.410658 | 5_2:-70464167 | Msa0785440:CDS |
| AGGCTCGAACAACTTCTATA+TGG | 0.413581 | 5_2:-70461739 | Msa0785440:three_prime_UTR |
| TGTTGTTTCAGATTCATAGA+AGG | 0.415721 | 5_2:-70462628 | Msa0785440:intron |
| TTGTTTACCAAAGCTCTAGA+TGG | 0.420805 | 5_2:+70465251 | None:intergenic |
| GAATCTGCTATAATGGATAC+TGG | 0.421279 | 5_2:-70463031 | Msa0785440:CDS |
| ATTCATAGAAGGCCAAGAAT+TGG | 0.426756 | 5_2:-70462617 | Msa0785440:CDS |
| AGGTTTCACCTGTATTCATT+GGG | 0.428419 | 5_2:+70464283 | None:intergenic |
| TTATCCAACTTGGTCTCTTG+TGG | 0.433491 | 5_2:-70461788 | Msa0785440:three_prime_UTR |
| CATATGCCTTCCTCTACTTC+AGG | 0.435073 | 5_2:+70462170 | None:intergenic |
| TTCAAAGGTGGGTCCAATAG+AGG | 0.438064 | 5_2:-70465329 | Msa0785440:CDS |
| TCAATCAGAGATTATTATGA+AGG | 0.445893 | 5_2:-70462986 | Msa0785440:CDS |
| CAAGACATGCCTTCCTCTGC+AGG | 0.450171 | 5_2:+70465281 | None:intergenic |
| TCTTCTCCAGCTTATGGTGG+TGG | 0.452845 | 5_2:-70461981 | Msa0785440:CDS |
| TCTCATGTTGAAAACAAATT+GGG | 0.452858 | 5_2:-70462035 | Msa0785440:CDS |
| GCGTGCTCCATCTAGAGCTT+TGG | 0.454192 | 5_2:-70465258 | Msa0785440:intron |
| TAAAATGGTGCAGGAGCATA+AGG | 0.458370 | 5_2:+70464307 | None:intergenic |
| TCACACCCAGAGAGAAAGTC+TGG | 0.460029 | 5_2:-70465377 | Msa0785440:CDS |
| CAGATTCCTATAAATGCTGC+TGG | 0.468618 | 5_2:-70463327 | Msa0785440:CDS |
| TGGAAATTGTTTAGGGTGCA+TGG | 0.469911 | 5_2:-70464147 | Msa0785440:CDS |
| AGACTTTGCACCTTTCTTTG+AGG | 0.470152 | 5_2:+70462055 | None:intergenic |
| GAGTGGCATCGAAAGCAGTC+TGG | 0.476246 | 5_2:+70464110 | None:intergenic |
| ATGCAATGAGAGTTTGTTGC+TGG | 0.480588 | 5_2:+70462107 | None:intergenic |
| ATCAGAAGAAGGAGCCATAA+GGG | 0.482630 | 5_2:+70465915 | None:intergenic |
| GCCATAAGGGTGGGAGAGTG+AGG | 0.492342 | 5_2:+70465928 | None:intergenic |
| AGAGTGAGGGGAGAAGGAAG+AGG | 0.493876 | 5_2:+70465942 | None:intergenic |
| GAAGATATGAAGAGACCAAA+TGG | 0.499622 | 5_2:-70464510 | Msa0785440:intron |
| TTCTCTTTCAACAAGAAGCA+TGG | 0.501914 | 5_2:+70462934 | None:intergenic |
| GATCAGAAGAAGGAGCCATA+AGG | 0.502155 | 5_2:+70465914 | None:intergenic |
| CTAAAACCACCACCATAAGC+TGG | 0.509878 | 5_2:+70461975 | None:intergenic |
| GTGAGGGGAGAAGGAAGAGG+TGG | 0.512378 | 5_2:+70465945 | None:intergenic |
| CTGCAGAGGAAGGCATGTCT+TGG | 0.516391 | 5_2:-70465280 | Msa0785440:CDS |
| TAGAGCTCAGAAGGAGAAAG+AGG | 0.516816 | 5_2:-70464565 | Msa0785440:CDS |
| ACCATGCATGCATCAACTCA+TGG | 0.520688 | 5_2:+70462309 | None:intergenic |
| CATAAGGGTGGGAGAGTGAG+GGG | 0.527731 | 5_2:+70465930 | None:intergenic |
| TGATCGTGCTAGAGCTCAGA+AGG | 0.527771 | 5_2:-70464574 | Msa0785440:CDS |
| TTATTTGCATTAGCCCATCA+AGG | 0.527904 | 5_2:-70464406 | Msa0785440:intron |
| CCATAAGGGTGGGAGAGTGA+GGG | 0.530900 | 5_2:+70465929 | None:intergenic |
| TCTCTGATTGAATGGTATAG+AGG | 0.533543 | 5_2:+70462998 | None:intergenic |
| GGATCAAACTACCTCGCGCT+CGG | 0.536169 | 5_2:+70464070 | None:intergenic |
| GCTGCTTCTTCCTCAAAGAA+AGG | 0.536522 | 5_2:-70462065 | Msa0785440:CDS |
| CATAGAAGGCCAAGAATTGG+AGG | 0.541624 | 5_2:-70462614 | Msa0785440:CDS |
| GTCAGGTTCTGTCATATATG+TGG | 0.544593 | 5_2:-70462148 | Msa0785440:CDS |
| TCTCTTTCAACAAGAAGCAT+GGG | 0.545613 | 5_2:+70462935 | None:intergenic |
| AAGCTTGTGCTTAGAGTGCA+TGG | 0.547235 | 5_2:-70463053 | Msa0785440:CDS |
| CCCATCAAGGATATAGGTGG+GGG | 0.548766 | 5_2:-70464393 | Msa0785440:CDS |
| CACCATTTGCCAGAAACAAG+AGG | 0.548780 | 5_2:-70462791 | Msa0785440:CDS |
| TCATTGGGATAAAATGGTGC+AGG | 0.553987 | 5_2:+70464298 | None:intergenic |
| TGAAACCAGACTTTCTCTCT+GGG | 0.553994 | 5_2:+70465372 | None:intergenic |
| CATTATGATCCTGCAGAGGA+AGG | 0.555932 | 5_2:-70465290 | Msa0785440:CDS |
| AGAGAGAGATGGAAAAGAAG+AGG | 0.560854 | 5_2:+70465998 | None:intergenic |
| GATTCTTCTCCAGCTTATGG+TGG | 0.562395 | 5_2:-70461984 | Msa0785440:CDS |
| AGTAGAGGAAGGCATATGTC+AGG | 0.562990 | 5_2:-70462165 | Msa0785440:CDS |
| CTATAGTATTTCGTATTCCG+AGG | 0.568127 | 5_2:+70463091 | None:intergenic |
| GAAGAAGGAGCCATAAGGGT+GGG | 0.573427 | 5_2:+70465919 | None:intergenic |
| CCATGCATGCATCAACTCAT+GGG | 0.575521 | 5_2:+70462310 | None:intergenic |
| AGCCCATCAAGGATATAGGT+GGG | 0.576893 | 5_2:-70464395 | Msa0785440:CDS |
| CCCATGAGTTGATGCATGCA+TGG | 0.580940 | 5_2:-70462310 | Msa0785440:CDS |
| AGCAACAAACTCTCATTGCA+TGG | 0.581985 | 5_2:-70462105 | Msa0785440:CDS |
| TCACAGTTTGCTCTTCCGAA+AGG | 0.583186 | 5_2:+70462762 | None:intergenic |
| CTGAAGAAAGTGACATTGCA+TGG | 0.583861 | 5_2:+70464535 | None:intergenic |
| AAATGATGAAGATTATGGAA+AGG | 0.584158 | 5_2:-70464365 | Msa0785440:CDS |
| GTATTGTCATATTCATGAGA+TGG | 0.585321 | 5_2:+70463258 | None:intergenic |
| ATGACACAAAGAGAGAGAGA+TGG | 0.585935 | 5_2:+70465987 | None:intergenic |
| GTGGATTGCTCCAAAACTCA+AGG | 0.589321 | 5_2:-70461769 | Msa0785440:three_prime_UTR |
| GCCCATCAAGGATATAGGTG+GGG | 0.591148 | 5_2:-70464394 | Msa0785440:CDS |
| CAATCTCAGTCCTGAAGTAG+AGG | 0.592599 | 5_2:-70462180 | Msa0785440:CDS |
| TGAGGAAGAAGCAGCAGCTG+TGG | 0.594186 | 5_2:+70462073 | None:intergenic |
| CCAAAACTCAAGGCAGAGAG+AGG | 0.597527 | 5_2:-70461759 | Msa0785440:three_prime_UTR |
| TTGTTCTATATGGTCTGCCA+AGG | 0.597552 | 5_2:-70462523 | Msa0785440:intron |
| AACATGTGTCCTTATTACAC+AGG | 0.597623 | 5_2:+70461879 | None:intergenic |
| TAGCCCATCAAGGATATAGG+TGG | 0.597899 | 5_2:-70464396 | Msa0785440:CDS |
| TGATTGATATGATCAGAAGA+AGG | 0.604305 | 5_2:+70465904 | None:intergenic |
| CATCAAGGATATAGGTGGGG+GGG | 0.609524 | 5_2:-70464391 | Msa0785440:CDS |
| CATTGAACAGAAGACTATGT+GGG | 0.609543 | 5_2:-70464193 | Msa0785440:intron |
| AATACTATAGACTCGAGGAC+GGG | 0.611229 | 5_2:-70463078 | Msa0785440:CDS |
| CTCAGTCCTGAAGTAGAGGA+AGG | 0.619865 | 5_2:-70462176 | Msa0785440:CDS |
| TTGTACTCTGACATCCTCAC+AGG | 0.622459 | 5_2:+70461715 | None:intergenic |
| AATGGTGCAGGAGCATAAGG+AGG | 0.625823 | 5_2:+70464310 | None:intergenic |
| AGTAAAGTACCATATATACA+TGG | 0.626223 | 5_2:+70465871 | None:intergenic |
| TTCTCCCATTACCGAGCGCG+AGG | 0.628667 | 5_2:-70464081 | Msa0785440:intron |
| CAATCCACAAGAGACCAAGT+TGG | 0.637995 | 5_2:+70461784 | None:intergenic |
| AGAAGAAGGAGCCATAAGGG+TGG | 0.645148 | 5_2:+70465918 | None:intergenic |
| AAGGTGGGTCCAATAGAGGA+AGG | 0.645391 | 5_2:-70465325 | Msa0785440:CDS |
| ATTGAACAGAAGACTATGTG+GGG | 0.648467 | 5_2:-70464192 | Msa0785440:intron |
| AAATACTATAGACTCGAGGA+CGG | 0.654015 | 5_2:-70463079 | Msa0785440:CDS |
| GCATTGAACAGAAGACTATG+TGG | 0.658253 | 5_2:-70464194 | Msa0785440:intron |
| AACTTCTATATGGTCCTGTG+AGG | 0.664585 | 5_2:-70461729 | Msa0785440:three_prime_UTR |
| GGGTCCAATAGAGGAAGGAG+TGG | 0.672837 | 5_2:-70465320 | Msa0785440:CDS |
| ATGGTGCAGGAGCATAAGGA+GGG | 0.678829 | 5_2:+70464311 | None:intergenic |
| CCATCAAGGATATAGGTGGG+GGG | 0.680331 | 5_2:-70464392 | Msa0785440:CDS |
| TAATGGGAGAATGACAAGAG+TGG | 0.685159 | 5_2:+70464093 | None:intergenic |
| ACATGTGTCCTTATTACACA+GGG | 0.695284 | 5_2:+70461880 | None:intergenic |
| TACGAAATACTATAGACTCG+AGG | 0.695310 | 5_2:-70463083 | Msa0785440:CDS |
| TCATCATTATGATCCTGCAG+AGG | 0.695986 | 5_2:-70465294 | Msa0785440:CDS |
| TTGAACAGAAGACTATGTGG+GGG | 0.724066 | 5_2:-70464191 | Msa0785440:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTCATTTGATTTAATTAAA+AGG | - | chr5_2:70461930-70461949 | Msa0785440:CDS | 10.0% |
| !!! | TTCATTTGATTTAATTAAAA+GGG | - | chr5_2:70461931-70461950 | Msa0785440:CDS | 10.0% |
| !! | GATAATAATTGAATATAATA+TGG | + | chr5_2:70462941-70462960 | None:intergenic | 10.0% |
| !!! | AAATCAAAATTTTCTTAAGT+GGG | + | chr5_2:70461860-70461879 | None:intergenic | 15.0% |
| !!! | AAAATCAAAATTTTCTTAAG+TGG | + | chr5_2:70461861-70461880 | None:intergenic | 15.0% |
| !!! | TTTTCATATGAATCTAAAAA+AGG | - | chr5_2:70461978-70461997 | Msa0785440:CDS | 15.0% |
| !!! | TTTTTTTTTTTTTTGACTCA+AGG | - | chr5_2:70462976-70462995 | Msa0785440:CDS | 15.0% |
| !!! | ATTTTGCTATCATTTATAAT+TGG | - | chr5_2:70463380-70463399 | Msa0785440:intron | 15.0% |
| !! | TATAGATTAAAGTTATTCAT+TGG | + | chr5_2:70464464-70464483 | None:intergenic | 15.0% |
| !!! | TAAAATTGAAATGTTTTTAC+CGG | - | chr5_2:70465236-70465255 | Msa0785440:intron | 15.0% |
| !! | AATAATAAGCTAAATACATT+AGG | + | chr5_2:70465957-70465976 | None:intergenic | 15.0% |
| !! | CTTATTGAATCATGAAAATT+TGG | - | chr5_2:70462187-70462206 | Msa0785440:CDS | 20.0% |
| !! | GTATTATTTGGACTAATAAT+TGG | - | chr5_2:70462866-70462885 | Msa0785440:intron | 20.0% |
| !! | ACAATACTATTGATGTAATT+AGG | - | chr5_2:70463013-70463032 | Msa0785440:CDS | 20.0% |
| !! | ATAATCTATGGAAATTGTTT+AGG | - | chr5_2:70463456-70463475 | Msa0785440:intron | 20.0% |
| !! | TAATCTATGGAAATTGTTTA+GGG | - | chr5_2:70463457-70463476 | Msa0785440:intron | 20.0% |
| !! | TTAAAACAAGATTTGTGATA+TGG | + | chr5_2:70463668-70463687 | None:intergenic | 20.0% |
| !! | AATTATGAAACAATTTAGAG+TGG | + | chr5_2:70464425-70464444 | None:intergenic | 20.0% |
| !! | AACAATATAGAGTAATTAAG+AGG | + | chr5_2:70464786-70464805 | None:intergenic | 20.0% |
| !!! | TGATCTACAATTTTTTCATA+AGG | + | chr5_2:70465160-70465179 | None:intergenic | 20.0% |
| !!! | TAAATTGATGATTCACTAAA+TGG | + | chr5_2:70465192-70465211 | None:intergenic | 20.0% |
| !! | AATATGTGTATATACCTTTA+AGG | + | chr5_2:70465332-70465351 | None:intergenic | 20.0% |
| !! | AATGAAGCTGTTAATAAATA+TGG | - | chr5_2:70465666-70465685 | Msa0785440:intron | 20.0% |
| !! | AGTAAAGTACCATATATACA+TGG | + | chr5_2:70461743-70461762 | None:intergenic | 25.0% |
| ! | TTTGAATATCAAAGTGCATA+AGG | + | chr5_2:70461808-70461827 | None:intergenic | 25.0% |
| ! | AGTTCAAATAATAGCATCAT+GGG | + | chr5_2:70461902-70461921 | None:intergenic | 25.0% |
| ! | AAGTTCAAATAATAGCATCA+TGG | + | chr5_2:70461903-70461922 | None:intergenic | 25.0% |
| ! | ATTGAATCATGAAAATTTGG+TGG | - | chr5_2:70462190-70462209 | Msa0785440:CDS | 25.0% |
| ! | TGAAGAAAAATGAAATTGAG+TGG | + | chr5_2:70462388-70462407 | None:intergenic | 25.0% |
| !!! | TGATTCTTGTTTGTTATGAA+TGG | - | chr5_2:70462426-70462445 | Msa0785440:intron | 25.0% |
| ! | GAAATATATGTGTAACTAAG+GGG | + | chr5_2:70462517-70462536 | None:intergenic | 25.0% |
| ! | GGAAATATATGTGTAACTAA+GGG | + | chr5_2:70462518-70462537 | None:intergenic | 25.0% |
| ! | TGGAAATATATGTGTAACTA+AGG | + | chr5_2:70462519-70462538 | None:intergenic | 25.0% |
| !!! | TGTGTGATTTTTTAGAAACA+TGG | - | chr5_2:70462561-70462580 | Msa0785440:CDS | 25.0% |
| ! | CTTATTATGTACTAAATCCA+CGG | - | chr5_2:70462631-70462650 | Msa0785440:intron | 25.0% |
| !! | ATTATTTGGTGATTTGTAAG+AGG | + | chr5_2:70462661-70462680 | None:intergenic | 25.0% |
| ! | GCGTTAACATAGTAATTATT+TGG | + | chr5_2:70462675-70462694 | None:intergenic | 25.0% |
| ! | AAGTGAGACTTAGTATTATT+TGG | - | chr5_2:70462854-70462873 | Msa0785440:intron | 25.0% |
| ! | AAAATTAAGTACCAACCATT+TGG | + | chr5_2:70463119-70463138 | None:intergenic | 25.0% |
| ! | AAATGATGAAGATTATGGAA+AGG | - | chr5_2:70463246-70463265 | Msa0785440:CDS | 25.0% |
| ! | TTCATTTATTAAGAGAGCAA+AGG | + | chr5_2:70463351-70463370 | None:intergenic | 25.0% |
| ! | CAACAAACAAAAAAATAGTC+AGG | + | chr5_2:70463617-70463636 | None:intergenic | 25.0% |
| ! | GGAAGATTAATCTTACAAAT+TGG | + | chr5_2:70463724-70463743 | None:intergenic | 25.0% |
| ! | CTTATGTCATAGTTCTTATA+AGG | + | chr5_2:70463804-70463823 | None:intergenic | 25.0% |
| ! | GAAGTAAATTATCAATGAGA+GGG | + | chr5_2:70463904-70463923 | None:intergenic | 25.0% |
| ! | TGAAGTAAATTATCAATGAG+AGG | + | chr5_2:70463905-70463924 | None:intergenic | 25.0% |
| !!! | AAGTTATTCATTGGTTGTTT+TGG | + | chr5_2:70464455-70464474 | None:intergenic | 25.0% |
| ! | CATAATAATCTCTGATTGAA+TGG | + | chr5_2:70464624-70464643 | None:intergenic | 25.0% |
| ! | TCAATCAGAGATTATTATGA+AGG | - | chr5_2:70464625-70464644 | Msa0785440:intron | 25.0% |
| ! | TGTGTTAAAATATCATACAC+TGG | + | chr5_2:70464875-70464894 | None:intergenic | 25.0% |
| !! | TGTTTTCTTTGATTAGAATG+TGG | - | chr5_2:70464903-70464922 | Msa0785440:intron | 25.0% |
| !!! | CATTTTCTTATTAGCTTTTG+AGG | + | chr5_2:70465051-70465070 | None:intergenic | 25.0% |
| ! | TTTCATAAGGTAATTTCTGA+GGG | + | chr5_2:70465147-70465166 | None:intergenic | 25.0% |
| !! | TTTTCATAAGGTAATTTCTG+AGG | + | chr5_2:70465148-70465167 | None:intergenic | 25.0% |
| !!! | GTTTTTACCGGATATTTTTA+TGG | - | chr5_2:70465248-70465267 | Msa0785440:intron | 25.0% |
| !! | CATATTTTTCATCCTTATGT+TGG | - | chr5_2:70465346-70465365 | Msa0785440:CDS | 25.0% |
| ! | TTGTTCATCTTGAAATATGT+AGG | - | chr5_2:70465402-70465421 | Msa0785440:intron | 25.0% |
| ! | TCTCATGTTGAAAACAAATT+GGG | - | chr5_2:70465576-70465595 | Msa0785440:intron | 25.0% |
| TGATTGATATGATCAGAAGA+AGG | + | chr5_2:70461710-70461729 | None:intergenic | 30.0% | |
| CTTTCTCATCCATGTATATA+TGG | - | chr5_2:70461731-70461750 | Msa0785440:three_prime_UTR | 30.0% | |
| AGAAAAAGAGAAAAGAGAGA+AGG | + | chr5_2:70461768-70461787 | None:intergenic | 30.0% | |
| ! | CAAAATTTTCTTAAGTGGGT+CGG | + | chr5_2:70461856-70461875 | None:intergenic | 30.0% |
| GTTCAAATAATAGCATCATG+GGG | + | chr5_2:70461901-70461920 | None:intergenic | 30.0% | |
| TATTACTGATATCGATGTGT+CGG | + | chr5_2:70462058-70462077 | None:intergenic | 30.0% | |
| TTGAATGTAATAACACGTGT+CGG | - | chr5_2:70462098-70462117 | Msa0785440:CDS | 30.0% | |
| ! | TTAGTAAGCTTTTCAAAGGT+GGG | - | chr5_2:70462271-70462290 | Msa0785440:intron | 30.0% |
| !! | TTCTTGTTTGTTATGAATGG+AGG | - | chr5_2:70462429-70462448 | Msa0785440:intron | 30.0% |
| TGTTGGAACTTATTGAATGT+TGG | + | chr5_2:70462539-70462558 | None:intergenic | 30.0% | |
| CTAAAAAATCACACACATGT+TGG | + | chr5_2:70462556-70462575 | None:intergenic | 30.0% | |
| !!! | GTGATTTTTTAGAAACATGG+TGG | - | chr5_2:70462564-70462583 | Msa0785440:CDS | 30.0% |
| TTCATCTTGATGAGATCAAT+AGG | + | chr5_2:70462836-70462855 | None:intergenic | 30.0% | |
| GGAGAAAATGATGAAGATTA+TGG | - | chr5_2:70463241-70463260 | Msa0785440:CDS | 30.0% | |
| CTGTATTCATTGGGATAAAA+TGG | + | chr5_2:70463322-70463341 | None:intergenic | 30.0% | |
| ! | CATTTTATCCCAATGAATAC+AGG | - | chr5_2:70463320-70463339 | Msa0785440:CDS | 30.0% |
| !! | ATAATTGGTAATGTGTGTTG+TGG | - | chr5_2:70463395-70463414 | Msa0785440:intron | 30.0% |
| GATCTCAAAATCTCATAAAG+AGG | + | chr5_2:70463565-70463584 | None:intergenic | 30.0% | |
| AGAATAACTTGAGTAAGCAA+AGG | + | chr5_2:70463745-70463764 | None:intergenic | 30.0% | |
| !! | TTCAAAAGTCCAGCTTTATT+CGG | + | chr5_2:70463861-70463880 | None:intergenic | 30.0% |
| AATTATCAATGAGAGGGAAA+TGG | + | chr5_2:70463898-70463917 | None:intergenic | 30.0% | |
| !!! | TAAGTTGTTTTTCGCAAACA+GGG | + | chr5_2:70463997-70464016 | None:intergenic | 30.0% |
| !!! | TTAAGTTGTTTTTCGCAAAC+AGG | + | chr5_2:70463998-70464017 | None:intergenic | 30.0% |
| ATATGTGTCTATGCTATAAG+TGG | + | chr5_2:70464025-70464044 | None:intergenic | 30.0% | |
| GTTATGTATAATTGCACAAG+TGG | - | chr5_2:70464055-70464074 | Msa0785440:intron | 30.0% | |
| GTACATAAACTCAAAAAAGC+TGG | - | chr5_2:70464218-70464237 | Msa0785440:intron | 30.0% | |
| ! | ATGAGATGGACAATACTTTT+GGG | + | chr5_2:70464342-70464361 | None:intergenic | 30.0% |
| GTATTGTCATATTCATGAGA+TGG | + | chr5_2:70464356-70464375 | None:intergenic | 30.0% | |
| !! | TACTCTATATTGTTTCTGTC+AGG | - | chr5_2:70464792-70464811 | Msa0785440:intron | 30.0% |
| !! | ACTCTATATTGTTTCTGTCA+GGG | - | chr5_2:70464793-70464812 | Msa0785440:intron | 30.0% |
| !! | TGTTGTTTCAGATTCATAGA+AGG | - | chr5_2:70464983-70465002 | Msa0785440:intron | 30.0% |
| ACAGCAATTCTTGTTCTATA+TGG | - | chr5_2:70465078-70465097 | Msa0785440:intron | 30.0% | |
| TTCATAAGGTAATTTCTGAG+GGG | + | chr5_2:70465146-70465165 | None:intergenic | 30.0% | |
| TTTAGTGCTTGAAATAGAAC+AGG | - | chr5_2:70465208-70465227 | Msa0785440:intron | 30.0% | |
| AGTCATGTATACTTAGAAGT+TGG | + | chr5_2:70465376-70465395 | None:intergenic | 30.0% | |
| GTCTCATGTTGAAAACAAAT+TGG | - | chr5_2:70465575-70465594 | Msa0785440:intron | 30.0% | |
| ATTGTTCTACAAGTGACTAT+TGG | - | chr5_2:70465794-70465813 | Msa0785440:intron | 30.0% | |
| !!! | TTGGTCTTTTTTATCCAACT+TGG | - | chr5_2:70465813-70465832 | Msa0785440:intron | 30.0% |
| GATGCTTCATGTAAACTACA+TGG | + | chr5_2:70462019-70462038 | None:intergenic | 35.0% | |
| ! | ATGAAGCATCAACACAAACA+TGG | - | chr5_2:70462029-70462048 | Msa0785440:CDS | 35.0% |
| GTTTGTGATCACTATTCAAG+AGG | - | chr5_2:70462153-70462172 | Msa0785440:CDS | 35.0% | |
| !! | ATGAAAATTTGGTGGTGATC+AGG | - | chr5_2:70462198-70462217 | Msa0785440:intron | 35.0% |
| !! | TGAAAATTTGGTGGTGATCA+GGG | - | chr5_2:70462199-70462218 | Msa0785440:intron | 35.0% |
| ! | GAAAGTCTGGTTTCATGAAA+TGG | - | chr5_2:70462247-70462266 | Msa0785440:intron | 35.0% |
| ! | TGGCTTAGTAAGCTTTTCAA+AGG | - | chr5_2:70462267-70462286 | Msa0785440:intron | 35.0% |
| ! | CTTAGTAAGCTTTTCAAAGG+TGG | - | chr5_2:70462270-70462289 | Msa0785440:intron | 35.0% |
| !! | TTGTTTACCAAAGCTCTAGA+TGG | + | chr5_2:70462363-70462382 | None:intergenic | 35.0% |
| ATATATGTGTAACTAAGGGG+AGG | + | chr5_2:70462514-70462533 | None:intergenic | 35.0% | |
| TATGTTAACGCATTCTCTAG+TGG | - | chr5_2:70462684-70462703 | Msa0785440:intron | 35.0% | |
| GAAGATATGAAGAGACCAAA+TGG | - | chr5_2:70463101-70463120 | Msa0785440:intron | 35.0% | |
| ATATGAAGAGACCAAATGGT+TGG | - | chr5_2:70463105-70463124 | Msa0785440:intron | 35.0% | |
| !!! | AAAAGTGCTTTTTGCTCACT+TGG | - | chr5_2:70463143-70463162 | Msa0785440:intron | 35.0% |
| TTATTTGCATTAGCCCATCA+AGG | - | chr5_2:70463205-70463224 | Msa0785440:intron | 35.0% | |
| AGGTTTCACCTGTATTCATT+GGG | + | chr5_2:70463331-70463350 | None:intergenic | 35.0% | |
| AAGGTTTCACCTGTATTCAT+TGG | + | chr5_2:70463332-70463351 | None:intergenic | 35.0% | |
| CATTGAACAGAAGACTATGT+GGG | - | chr5_2:70463418-70463437 | Msa0785440:intron | 35.0% | |
| ATTGAACAGAAGACTATGTG+GGG | - | chr5_2:70463419-70463438 | Msa0785440:intron | 35.0% | |
| TGCAATCAGGAGATAATCTA+TGG | - | chr5_2:70463444-70463463 | Msa0785440:intron | 35.0% | |
| ! | TGATCCAAGTTTTCTTTGTC+AGG | - | chr5_2:70463635-70463654 | Msa0785440:intron | 35.0% |
| ! | GATCCAAGTTTTCTTTGTCA+GGG | - | chr5_2:70463636-70463655 | Msa0785440:intron | 35.0% |
| ! | GGAAGCAAACTTCACATTTT+GGG | + | chr5_2:70463703-70463722 | None:intergenic | 35.0% |
| ! | TGGAAGCAAACTTCACATTT+TGG | + | chr5_2:70463704-70463723 | None:intergenic | 35.0% |
| ATAGACACATATTGCACAAG+TGG | - | chr5_2:70464033-70464052 | Msa0785440:intron | 35.0% | |
| TTGTAGAAACTCTACCAAAC+AGG | - | chr5_2:70464180-70464199 | Msa0785440:CDS | 35.0% | |
| ! | TAAGCACTTTTAAGCCTGTT+TGG | + | chr5_2:70464197-70464216 | None:intergenic | 35.0% |
| TCAAAAAAGCTGGTCAAAAC+AGG | - | chr5_2:70464228-70464247 | Msa0785440:intron | 35.0% | |
| ATCAAACCAGCAGCATTTAT+AGG | + | chr5_2:70464293-70464312 | None:intergenic | 35.0% | |
| !!! | AATACTTTTGGGACCAAAAG+GGG | + | chr5_2:70464331-70464350 | None:intergenic | 35.0% |
| !!! | CAATACTTTTGGGACCAAAA+GGG | + | chr5_2:70464332-70464351 | None:intergenic | 35.0% |
| !!! | ACAATACTTTTGGGACCAAA+AGG | + | chr5_2:70464333-70464352 | None:intergenic | 35.0% |
| ! | CATGAGATGGACAATACTTT+TGG | + | chr5_2:70464343-70464362 | None:intergenic | 35.0% |
| CTGTAGTTGTGAAAGATTAG+AGG | - | chr5_2:70464385-70464404 | Msa0785440:CDS | 35.0% | |
| CTATAGTATTTCGTATTCCG+AGG | + | chr5_2:70464523-70464542 | None:intergenic | 35.0% | |
| TACGAAATACTATAGACTCG+AGG | - | chr5_2:70464528-70464547 | Msa0785440:CDS | 35.0% | |
| AAATACTATAGACTCGAGGA+CGG | - | chr5_2:70464532-70464551 | Msa0785440:CDS | 35.0% | |
| !! | GAATCTGCTATAATGGATAC+TGG | - | chr5_2:70464580-70464599 | Msa0785440:intron | 35.0% |
| TCTCTGATTGAATGGTATAG+AGG | + | chr5_2:70464616-70464635 | None:intergenic | 35.0% | |
| ! | TCTCTTTCAACAAGAAGCAT+GGG | + | chr5_2:70464679-70464698 | None:intergenic | 35.0% |
| TTCTCTTTCAACAAGAAGCA+TGG | + | chr5_2:70464680-70464699 | None:intergenic | 35.0% | |
| GCACTTAATGATGCTATTGT+TGG | - | chr5_2:70464700-70464719 | Msa0785440:intron | 35.0% | |
| AACAAGAGGTTTATGCCTTT+CGG | - | chr5_2:70464834-70464853 | Msa0785440:intron | 35.0% | |
| ATTCATAGAAGGCCAAGAAT+TGG | - | chr5_2:70464994-70465013 | Msa0785440:intron | 35.0% | |
| TTCTCATGCCTATAAGTCTA+TGG | + | chr5_2:70465023-70465042 | None:intergenic | 35.0% | |
| CTGCATGCCATAAAAATATC+CGG | + | chr5_2:70465258-70465277 | None:intergenic | 35.0% | |
| GAAGTTGGAATACCAACATA+AGG | + | chr5_2:70465361-70465380 | None:intergenic | 35.0% | |
| AATGATTCTTCTCCAGCTTA+TGG | - | chr5_2:70465624-70465643 | Msa0785440:intron | 35.0% | |
| !! | GGTTTTATCCCTGTGTAATA+AGG | - | chr5_2:70465723-70465742 | Msa0785440:intron | 35.0% |
| ACATGTGTCCTTATTACACA+GGG | + | chr5_2:70465734-70465753 | None:intergenic | 35.0% | |
| AACATGTGTCCTTATTACAC+AGG | + | chr5_2:70465735-70465754 | None:intergenic | 35.0% | |
| ATGACACAAAGAGAGAGAGA+TGG | + | chr5_2:70461627-70461646 | None:intergenic | 40.0% | |
| ATCAGAAGAAGGAGCCATAA+GGG | + | chr5_2:70461699-70461718 | None:intergenic | 40.0% | |
| CAAATAATAGCATCATGGGG+TGG | + | chr5_2:70461898-70461917 | None:intergenic | 40.0% | |
| !! | GAAAATTTGGTGGTGATCAG+GGG | - | chr5_2:70462200-70462219 | Msa0785440:intron | 40.0% |
| TGAAACCAGACTTTCTCTCT+GGG | + | chr5_2:70462242-70462261 | None:intergenic | 40.0% | |
| ATGAAACCAGACTTTCTCTC+TGG | + | chr5_2:70462243-70462262 | None:intergenic | 40.0% | |
| TCATCATTATGATCCTGCAG+AGG | - | chr5_2:70462317-70462336 | Msa0785440:CDS | 40.0% | |
| TTCCATTCCCTTGACTAAGA+TGG | - | chr5_2:70462906-70462925 | Msa0785440:CDS | 40.0% | |
| TTCCATCTTAGTCAAGGGAA+TGG | + | chr5_2:70462911-70462930 | None:intergenic | 40.0% | |
| TCCTCTTCCATCTTAGTCAA+GGG | + | chr5_2:70462916-70462935 | None:intergenic | 40.0% | |
| TTCCTCTTCCATCTTAGTCA+AGG | + | chr5_2:70462917-70462936 | None:intergenic | 40.0% | |
| CAGAAGGAGAAAGAGGATTT+AGG | - | chr5_2:70463053-70463072 | Msa0785440:CDS | 40.0% | |
| CTGAAGAAAGTGACATTGCA+TGG | + | chr5_2:70463079-70463098 | None:intergenic | 40.0% | |
| CATTAGCCCATCAAGGATAT+AGG | - | chr5_2:70463212-70463231 | Msa0785440:intron | 40.0% | |
| ! | TAAAATGGTGCAGGAGCATA+AGG | + | chr5_2:70463307-70463326 | None:intergenic | 40.0% |
| TCATTGGGATAAAATGGTGC+AGG | + | chr5_2:70463316-70463335 | None:intergenic | 40.0% | |
| GCATTGAACAGAAGACTATG+TGG | - | chr5_2:70463417-70463436 | Msa0785440:intron | 40.0% | |
| TTGAACAGAAGACTATGTGG+GGG | - | chr5_2:70463420-70463439 | Msa0785440:intron | 40.0% | |
| ! | TGGAAATTGTTTAGGGTGCA+TGG | - | chr5_2:70463464-70463483 | Msa0785440:intron | 40.0% |
| TAATGGGAGAATGACAAGAG+TGG | + | chr5_2:70463521-70463540 | None:intergenic | 40.0% | |
| CTTCCCTGACAAAGAAAACT+TGG | + | chr5_2:70463642-70463661 | None:intergenic | 40.0% | |
| TCGGAGACTAGAATGCTAAT+TGG | + | chr5_2:70463842-70463861 | None:intergenic | 40.0% | |
| TTCTAGTCTCCGAATAAAGC+TGG | - | chr5_2:70463849-70463868 | Msa0785440:intron | 40.0% | |
| GTCAACTCCTGTCTATCAAT+TGG | - | chr5_2:70463950-70463969 | Msa0785440:intron | 40.0% | |
| TGTTAGGCCAATTGATAGAC+AGG | + | chr5_2:70463960-70463979 | None:intergenic | 40.0% | |
| GGCCTAACATCTTCACATTT+AGG | - | chr5_2:70463971-70463990 | Msa0785440:intron | 40.0% | |
| GGCCTAAATGTGAAGATGTT+AGG | + | chr5_2:70463976-70463995 | None:intergenic | 40.0% | |
| CAGATTCCTATAAATGCTGC+TGG | - | chr5_2:70464284-70464303 | Msa0785440:intron | 40.0% | |
| TTATCTTCCTCTTGAAGCCT+CGG | - | chr5_2:70464503-70464522 | Msa0785440:intron | 40.0% | |
| AATACTATAGACTCGAGGAC+GGG | - | chr5_2:70464533-70464552 | Msa0785440:CDS | 40.0% | |
| GTGCATGGAATCTGCTATAA+TGG | - | chr5_2:70464573-70464592 | Msa0785440:CDS | 40.0% | |
| !! | AACCTCTTGTTTCTGGCAAA+TGG | + | chr5_2:70464825-70464844 | None:intergenic | 40.0% |
| ! | AGGCATAAACCTCTTGTTTC+TGG | + | chr5_2:70464832-70464851 | None:intergenic | 40.0% |
| ATTGGAGGCCATAGACTTAT+AGG | - | chr5_2:70465012-70465031 | Msa0785440:intron | 40.0% | |
| TTGTTCTATATGGTCTGCCA+AGG | - | chr5_2:70465088-70465107 | Msa0785440:intron | 40.0% | |
| AACTATGGACAGTGGAAACT+TGG | - | chr5_2:70465112-70465131 | Msa0785440:intron | 40.0% | |
| !! | CGGATATTTTTATGGCATGC+AGG | - | chr5_2:70465256-70465275 | Msa0785440:intron | 40.0% |
| GTCAGGTTCTGTCATATATG+TGG | - | chr5_2:70465463-70465482 | Msa0785440:intron | 40.0% | |
| !! | ATGCAATGAGAGTTTGTTGC+TGG | + | chr5_2:70465507-70465526 | None:intergenic | 40.0% |
| AGCAACAAACTCTCATTGCA+TGG | - | chr5_2:70465506-70465525 | Msa0785440:intron | 40.0% | |
| AGACTTTGCACCTTTCTTTG+AGG | + | chr5_2:70465559-70465578 | None:intergenic | 40.0% | |
| CTCGAACATATTCGTTTGAC+TGG | - | chr5_2:70465702-70465721 | Msa0785440:intron | 40.0% | |
| GGACACATGTTCTCTAAGTA+TGG | - | chr5_2:70465744-70465763 | Msa0785440:intron | 40.0% | |
| TTATCCAACTTGGTCTCTTG+TGG | - | chr5_2:70465823-70465842 | Msa0785440:intron | 40.0% | |
| AGGCTCGAACAACTTCTATA+TGG | - | chr5_2:70465872-70465891 | Msa0785440:intron | 40.0% | |
| AACTTCTATATGGTCCTGTG+AGG | - | chr5_2:70465882-70465901 | Msa0785440:CDS | 40.0% | |
| GATCAGAAGAAGGAGCCATA+AGG | + | chr5_2:70461700-70461719 | None:intergenic | 45.0% | |
| ! | AACCCAACTGAAGGCATGTT+CGG | + | chr5_2:70462136-70462155 | None:intergenic | 45.0% |
| GTGATCACAAACCCAACTGA+AGG | + | chr5_2:70462145-70462164 | None:intergenic | 45.0% | |
| TTCAAAGGTGGGTCCAATAG+AGG | - | chr5_2:70462282-70462301 | Msa0785440:intron | 45.0% | |
| CATTATGATCCTGCAGAGGA+AGG | - | chr5_2:70462321-70462340 | Msa0785440:CDS | 45.0% | |
| GATTTGTAAGAGGATCACCG+TGG | + | chr5_2:70462651-70462670 | None:intergenic | 45.0% | |
| TCCCTTGACTAAGATGGAAG+AGG | - | chr5_2:70462912-70462931 | Msa0785440:CDS | 45.0% | |
| TAGAGCTCAGAAGGAGAAAG+AGG | - | chr5_2:70463046-70463065 | Msa0785440:CDS | 45.0% | |
| TAGCCCATCAAGGATATAGG+TGG | - | chr5_2:70463215-70463234 | Msa0785440:intron | 45.0% | |
| AGCCCATCAAGGATATAGGT+GGG | - | chr5_2:70463216-70463235 | Msa0785440:intron | 45.0% | |
| ! | AGTATAGATGCCACCCCTTT+TGG | - | chr5_2:70464315-70464334 | Msa0785440:CDS | 45.0% |
| AAGCTTGTGCTTAGAGTGCA+TGG | - | chr5_2:70464558-70464577 | Msa0785440:CDS | 45.0% | |
| CACCATTTGCCAGAAACAAG+AGG | - | chr5_2:70464820-70464839 | Msa0785440:intron | 45.0% | |
| ! | TCACAGTTTGCTCTTCCGAA+AGG | + | chr5_2:70464852-70464871 | None:intergenic | 45.0% |
| CATAGAAGGCCAAGAATTGG+AGG | - | chr5_2:70464997-70465016 | Msa0785440:intron | 45.0% | |
| AGTCTATGGCCTCCAATTCT+TGG | + | chr5_2:70465009-70465028 | None:intergenic | 45.0% | |
| ATGGTCTGCCAAGGTAACTA+TGG | - | chr5_2:70465097-70465116 | Msa0785440:intron | 45.0% | |
| TCCACTGTCCATAGTTACCT+TGG | + | chr5_2:70465108-70465127 | None:intergenic | 45.0% | |
| ATGGCATGCAGGTTACTAAC+AGG | - | chr5_2:70465267-70465286 | Msa0785440:CDS | 45.0% | |
| CCATGCATGCATCAACTCAT+GGG | + | chr5_2:70465304-70465323 | None:intergenic | 45.0% | |
| ACCATGCATGCATCAACTCA+TGG | + | chr5_2:70465305-70465324 | None:intergenic | 45.0% | |
| CATGCATGGTTACGCCTTAA+AGG | - | chr5_2:70465315-70465334 | Msa0785440:CDS | 45.0% | |
| CAATCTCAGTCCTGAAGTAG+AGG | - | chr5_2:70465431-70465450 | Msa0785440:intron | 45.0% | |
| CATATGCCTTCCTCTACTTC+AGG | + | chr5_2:70465444-70465463 | None:intergenic | 45.0% | |
| ! | AGTAGAGGAAGGCATATGTC+AGG | - | chr5_2:70465446-70465465 | Msa0785440:intron | 45.0% |
| GCTGCTTCTTCCTCAAAGAA+AGG | - | chr5_2:70465546-70465565 | Msa0785440:intron | 45.0% | |
| GATTCTTCTCCAGCTTATGG+TGG | - | chr5_2:70465627-70465646 | Msa0785440:intron | 45.0% | |
| CTAAAACCACCACCATAAGC+TGG | + | chr5_2:70465639-70465658 | None:intergenic | 45.0% | |
| CAATCCACAAGAGACCAAGT+TGG | + | chr5_2:70465830-70465849 | None:intergenic | 45.0% | |
| ! | GTGGATTGCTCCAAAACTCA+AGG | - | chr5_2:70465842-70465861 | Msa0785440:intron | 45.0% |
| TTGTACTCTGACATCCTCAC+AGG | + | chr5_2:70465899-70465918 | None:intergenic | 45.0% | |
| GAAGAAGGAGCCATAAGGGT+GGG | + | chr5_2:70461695-70461714 | None:intergenic | 50.0% | |
| AGAAGAAGGAGCCATAAGGG+TGG | + | chr5_2:70461696-70461715 | None:intergenic | 50.0% | |
| ACACCGAACATGCCTTCAGT+TGG | - | chr5_2:70462130-70462149 | Msa0785440:CDS | 50.0% | |
| CACCGAACATGCCTTCAGTT+GGG | - | chr5_2:70462131-70462150 | Msa0785440:CDS | 50.0% | |
| TCACACCCAGAGAGAAAGTC+TGG | - | chr5_2:70462234-70462253 | Msa0785440:intron | 50.0% | |
| AAGGTGGGTCCAATAGAGGA+AGG | - | chr5_2:70462286-70462305 | Msa0785440:intron | 50.0% | |
| ACGACCACTCCTTCCTCTAT+TGG | + | chr5_2:70462298-70462317 | None:intergenic | 50.0% | |
| TGTCGTGAACATTAGCGCAG+TGG | + | chr5_2:70462751-70462770 | None:intergenic | 50.0% | |
| TGATCGTGCTAGAGCTCAGA+AGG | - | chr5_2:70463037-70463056 | Msa0785440:CDS | 50.0% | |
| GCCCATCAAGGATATAGGTG+GGG | - | chr5_2:70463217-70463236 | Msa0785440:intron | 50.0% | |
| CCCCCACCTATATCCTTGAT+GGG | + | chr5_2:70463221-70463240 | None:intergenic | 50.0% | |
| CCCATCAAGGATATAGGTGG+GGG | - | chr5_2:70463218-70463237 | Msa0785440:intron | 50.0% | |
| CCATCAAGGATATAGGTGGG+GGG | - | chr5_2:70463219-70463238 | Msa0785440:intron | 50.0% | |
| CATCAAGGATATAGGTGGGG+GGG | - | chr5_2:70463220-70463239 | Msa0785440:intron | 50.0% | |
| ! | ATGGTGCAGGAGCATAAGGA+GGG | + | chr5_2:70463303-70463322 | None:intergenic | 50.0% |
| ! | AATGGTGCAGGAGCATAAGG+AGG | + | chr5_2:70463304-70463323 | None:intergenic | 50.0% |
| !!! | ACTTTTGGGACCAAAAGGGG+TGG | + | chr5_2:70464328-70464347 | None:intergenic | 50.0% |
| TCGTATTCCGAGGCTTCAAG+AGG | + | chr5_2:70464513-70464532 | None:intergenic | 50.0% | |
| GCCAAGGTAACTATGGACAG+TGG | - | chr5_2:70465104-70465123 | Msa0785440:intron | 50.0% | |
| !! | CCCATGAGTTGATGCATGCA+TGG | - | chr5_2:70465301-70465320 | Msa0785440:CDS | 50.0% |
| CTCAGTCCTGAAGTAGAGGA+AGG | - | chr5_2:70465435-70465454 | Msa0785440:intron | 50.0% | |
| TCTTCTCCAGCTTATGGTGG+TGG | - | chr5_2:70465630-70465649 | Msa0785440:intron | 50.0% | |
| ! | CCTCTCTCTGCCTTGAGTTT+TGG | + | chr5_2:70465855-70465874 | None:intergenic | 50.0% |
| CCAAAACTCAAGGCAGAGAG+AGG | - | chr5_2:70465852-70465871 | Msa0785440:intron | 50.0% | |
| AGAGTGAGGGGAGAAGGAAG+AGG | + | chr5_2:70461672-70461691 | None:intergenic | 55.0% | |
| CATAAGGGTGGGAGAGTGAG+GGG | + | chr5_2:70461684-70461703 | None:intergenic | 55.0% | |
| CCATAAGGGTGGGAGAGTGA+GGG | + | chr5_2:70461685-70461704 | None:intergenic | 55.0% | |
| GGGTCCAATAGAGGAAGGAG+TGG | - | chr5_2:70462291-70462310 | Msa0785440:intron | 55.0% | |
| CAAGACATGCCTTCCTCTGC+AGG | + | chr5_2:70462333-70462352 | None:intergenic | 55.0% | |
| ! | CTGCAGAGGAAGGCATGTCT+TGG | - | chr5_2:70462331-70462350 | Msa0785440:CDS | 55.0% |
| ! | GCGTGCTCCATCTAGAGCTT+TGG | - | chr5_2:70462353-70462372 | Msa0785440:intron | 55.0% |
| CCCCCCACCTATATCCTTGA+TGG | + | chr5_2:70463222-70463241 | None:intergenic | 55.0% | |
| ACTATGTGGGGGCTGCAATC+AGG | - | chr5_2:70463431-70463450 | Msa0785440:intron | 55.0% | |
| ! | GAGTGGCATCGAAAGCAGTC+TGG | + | chr5_2:70463504-70463523 | None:intergenic | 55.0% |
| ACTACCTCGCGCTCGGTAAT+GGG | + | chr5_2:70463537-70463556 | None:intergenic | 55.0% | |
| AACTACCTCGCGCTCGGTAA+TGG | + | chr5_2:70463538-70463557 | None:intergenic | 55.0% | |
| GGATCAAACTACCTCGCGCT+CGG | + | chr5_2:70463544-70463563 | None:intergenic | 55.0% | |
| TGAGGAAGAAGCAGCAGCTG+TGG | + | chr5_2:70465541-70465560 | None:intergenic | 55.0% | |
| GTGAGGGGAGAAGGAAGAGG+TGG | + | chr5_2:70461669-70461688 | None:intergenic | 60.0% | |
| CCCTCACTCTCCCACCCTTA+TGG | - | chr5_2:70461682-70461701 | Msa0785440:three_prime_UTR | 60.0% | |
| GCCATAAGGGTGGGAGAGTG+AGG | + | chr5_2:70461686-70461705 | None:intergenic | 60.0% | |
| TTCTCCCATTACCGAGCGCG+AGG | - | chr5_2:70463530-70463549 | Msa0785440:intron | 60.0% | |
| GGTGGGAGAGTGAGGGGAGA+AGG | + | chr5_2:70461678-70461697 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 70461614 | 70466019 | 70461614 | ID=Msa0785440;Name=Msa0785440 |
| chr5_2 | mRNA | 70461614 | 70466019 | 70461614 | ID=Msa0785440-mRNA-1;Parent=Msa0785440;Name=Msa0785440-mRNA-1;_AED=0.12;_eAED=0.12;_QI=87|0.9|1|1|1|1|11|279|476 |
| chr5_2 | exon | 70461614 | 70462209 | 70461614 | ID=Msa0785440-mRNA-1:exon:21251;Parent=Msa0785440-mRNA-1 |
| chr5_2 | exon | 70462297 | 70462355 | 70462297 | ID=Msa0785440-mRNA-1:exon:21250;Parent=Msa0785440-mRNA-1 |
| chr5_2 | exon | 70462524 | 70462639 | 70462524 | ID=Msa0785440-mRNA-1:exon:21249;Parent=Msa0785440-mRNA-1 |
| chr5_2 | exon | 70462757 | 70462819 | 70462757 | ID=Msa0785440-mRNA-1:exon:21248;Parent=Msa0785440-mRNA-1 |
| chr5_2 | exon | 70462901 | 70463113 | 70462901 | ID=Msa0785440-mRNA-1:exon:21247;Parent=Msa0785440-mRNA-1 |
| chr5_2 | exon | 70463227 | 70463346 | 70463227 | ID=Msa0785440-mRNA-1:exon:21246;Parent=Msa0785440-mRNA-1 |
| chr5_2 | exon | 70464082 | 70464205 | 70464082 | ID=Msa0785440-mRNA-1:exon:21245;Parent=Msa0785440-mRNA-1 |
| chr5_2 | exon | 70464292 | 70464415 | 70464292 | ID=Msa0785440-mRNA-1:exon:21244;Parent=Msa0785440-mRNA-1 |
| chr5_2 | exon | 70464511 | 70464598 | 70464511 | ID=Msa0785440-mRNA-1:exon:21243;Parent=Msa0785440-mRNA-1 |
| chr5_2 | exon | 70465259 | 70465413 | 70465259 | ID=Msa0785440-mRNA-1:exon:21242;Parent=Msa0785440-mRNA-1 |
| chr5_2 | exon | 70465881 | 70466019 | 70465881 | ID=Msa0785440-mRNA-1:exon:21241;Parent=Msa0785440-mRNA-1 |
| chr5_2 | five_prime_UTR | 70465933 | 70466019 | 70465933 | ID=Msa0785440-mRNA-1:five_prime_utr;Parent=Msa0785440-mRNA-1 |
| chr5_2 | CDS | 70465881 | 70465932 | 70465881 | ID=Msa0785440-mRNA-1:cds;Parent=Msa0785440-mRNA-1 |
| chr5_2 | CDS | 70465259 | 70465413 | 70465259 | ID=Msa0785440-mRNA-1:cds;Parent=Msa0785440-mRNA-1 |
| chr5_2 | CDS | 70464511 | 70464598 | 70464511 | ID=Msa0785440-mRNA-1:cds;Parent=Msa0785440-mRNA-1 |
| chr5_2 | CDS | 70464292 | 70464415 | 70464292 | ID=Msa0785440-mRNA-1:cds;Parent=Msa0785440-mRNA-1 |
| chr5_2 | CDS | 70464082 | 70464205 | 70464082 | ID=Msa0785440-mRNA-1:cds;Parent=Msa0785440-mRNA-1 |
| chr5_2 | CDS | 70463227 | 70463346 | 70463227 | ID=Msa0785440-mRNA-1:cds;Parent=Msa0785440-mRNA-1 |
| chr5_2 | CDS | 70462901 | 70463113 | 70462901 | ID=Msa0785440-mRNA-1:cds;Parent=Msa0785440-mRNA-1 |
| chr5_2 | CDS | 70462757 | 70462819 | 70462757 | ID=Msa0785440-mRNA-1:cds;Parent=Msa0785440-mRNA-1 |
| chr5_2 | CDS | 70462524 | 70462639 | 70462524 | ID=Msa0785440-mRNA-1:cds;Parent=Msa0785440-mRNA-1 |
| chr5_2 | CDS | 70462297 | 70462355 | 70462297 | ID=Msa0785440-mRNA-1:cds;Parent=Msa0785440-mRNA-1 |
| chr5_2 | CDS | 70461893 | 70462209 | 70461893 | ID=Msa0785440-mRNA-1:cds;Parent=Msa0785440-mRNA-1 |
| chr5_2 | three_prime_UTR | 70461614 | 70461892 | 70461614 | ID=Msa0785440-mRNA-1:three_prime_utr;Parent=Msa0785440-mRNA-1 |
| Gene Sequence |
| Protein sequence |
