Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0788680 | XP_013453021.1 | 98.058 | 515 | 10 | 0 | 1 | 515 | 85 | 599 | 0.0 | 1041 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0788680 | sp|Q9LS46|ALMT9_ARATH | 64.535 | 516 | 151 | 7 | 1 | 503 | 80 | 576 | 0.0 | 657 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0788680 | A0A072UB78 | 98.058 | 515 | 10 | 0 | 1 | 515 | 85 | 599 | 0.0 | 1041 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0788680 | Msa0927990 | 0.857122 | 2.023084e-62 | -8.615850e-47 |
| Msa0788680 | Msa0964440 | 0.887516 | 1.332465e-72 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0788680 | MtrunA17_Chr6g0484691 | 98.058 | 515 | 10 | 0 | 1 | 515 | 85 | 599 | 0.0 | 1041 |
| Msa0788680 | MtrunA17_Chr8g0390921 | 73.218 | 519 | 130 | 5 | 1 | 513 | 61 | 576 | 0.0 | 763 |
| Msa0788680 | MtrunA17_Chr8g0390931 | 69.333 | 525 | 135 | 8 | 1 | 515 | 60 | 568 | 0.0 | 717 |
| Msa0788680 | MtrunA17_Chr8g0390901 | 73.662 | 467 | 107 | 7 | 55 | 513 | 10 | 468 | 0.0 | 699 |
| Msa0788680 | MtrunA17_Chr1g0210101 | 58.669 | 496 | 182 | 7 | 1 | 496 | 114 | 586 | 0.0 | 570 |
| Msa0788680 | MtrunA17_Chr1g0212251 | 32.389 | 494 | 299 | 9 | 1 | 492 | 38 | 498 | 5.91e-80 | 259 |
| Msa0788680 | MtrunA17_Chr4g0054741 | 34.483 | 493 | 285 | 10 | 1 | 492 | 50 | 505 | 3.43e-78 | 254 |
| Msa0788680 | MtrunA17_Chr1g0212201 | 32.121 | 495 | 301 | 11 | 1 | 492 | 42 | 504 | 4.60e-77 | 251 |
| Msa0788680 | MtrunA17_Chr1g0188871 | 36.919 | 344 | 202 | 5 | 1 | 342 | 47 | 377 | 4.04e-76 | 247 |
| Msa0788680 | MtrunA17_Chr1g0212291 | 33.467 | 499 | 293 | 11 | 1 | 492 | 39 | 505 | 1.20e-74 | 245 |
| Msa0788680 | MtrunA17_Chr2g0321971 | 37.963 | 324 | 187 | 5 | 1 | 321 | 38 | 350 | 1.39e-69 | 229 |
| Msa0788680 | MtrunA17_Chr1g0188881 | 36.047 | 344 | 206 | 5 | 1 | 342 | 53 | 384 | 3.59e-69 | 229 |
| Msa0788680 | MtrunA17_Chr7g0259731 | 34.503 | 342 | 205 | 8 | 5 | 340 | 61 | 389 | 1.29e-61 | 208 |
| Msa0788680 | MtrunA17_Chr7g0267471 | 38.509 | 322 | 185 | 5 | 1 | 321 | 43 | 352 | 1.83e-61 | 209 |
| Msa0788680 | MtrunA17_Chr2g0321961 | 36.196 | 326 | 193 | 6 | 1 | 323 | 38 | 351 | 9.73e-61 | 206 |
| Msa0788680 | MtrunA17_Chr4g0025591 | 33.438 | 320 | 202 | 4 | 5 | 323 | 46 | 355 | 1.18e-60 | 206 |
| Msa0788680 | MtrunA17_Chr5g0400471 | 31.185 | 481 | 260 | 14 | 56 | 502 | 3 | 446 | 5.95e-56 | 194 |
| Msa0788680 | MtrunA17_Chr4g0054771 | 29.545 | 396 | 232 | 9 | 103 | 492 | 3 | 357 | 5.24e-50 | 176 |
| Msa0788680 | MtrunA17_Chr6g0454771 | 70.238 | 84 | 23 | 1 | 55 | 138 | 39 | 120 | 1.37e-32 | 121 |
| Msa0788680 | MtrunA17_Chr1g0189041 | 68.966 | 58 | 16 | 1 | 78 | 135 | 1 | 56 | 3.06e-21 | 87.4 |
| Msa0788680 | MtrunA17_Chr8g0390911 | 76.786 | 56 | 12 | 1 | 1 | 55 | 65 | 120 | 3.69e-21 | 89.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0788680 | AT3G18440.1 | 64.535 | 516 | 151 | 7 | 1 | 503 | 80 | 576 | 0.0 | 657 |
| Msa0788680 | AT1G18420.1 | 59.961 | 512 | 175 | 9 | 1 | 496 | 84 | 581 | 0.0 | 599 |
| Msa0788680 | AT1G18420.2 | 59.961 | 512 | 175 | 9 | 1 | 496 | 1 | 498 | 0.0 | 599 |
| Msa0788680 | AT1G25480.1 | 56.324 | 506 | 197 | 7 | 1 | 499 | 60 | 548 | 0.0 | 537 |
| Msa0788680 | AT1G68600.1 | 56.400 | 500 | 199 | 6 | 1 | 496 | 49 | 533 | 0.0 | 535 |
| Msa0788680 | AT2G17470.2 | 53.876 | 516 | 207 | 7 | 1 | 507 | 54 | 547 | 0.0 | 527 |
| Msa0788680 | AT2G17470.1 | 53.876 | 516 | 207 | 7 | 1 | 507 | 32 | 525 | 0.0 | 526 |
| Msa0788680 | AT5G46610.1 | 33.400 | 500 | 302 | 9 | 1 | 492 | 42 | 518 | 3.37e-85 | 273 |
| Msa0788680 | AT4G17970.1 | 31.226 | 522 | 300 | 7 | 1 | 492 | 40 | 532 | 4.07e-84 | 271 |
| Msa0788680 | AT5G46600.1 | 32.129 | 498 | 317 | 11 | 1 | 492 | 43 | 525 | 2.09e-75 | 248 |
| Msa0788680 | AT4G00910.1 | 36.782 | 348 | 207 | 6 | 1 | 344 | 59 | 397 | 5.21e-73 | 240 |
| Msa0788680 | AT1G08430.1 | 35.135 | 333 | 205 | 7 | 1 | 329 | 14 | 339 | 8.54e-70 | 231 |
| Msa0788680 | AT1G08440.1 | 35.714 | 322 | 199 | 5 | 1 | 321 | 14 | 328 | 2.90e-68 | 228 |
| Msa0788680 | AT5G46610.2 | 30.200 | 500 | 294 | 10 | 1 | 492 | 42 | 494 | 4.29e-68 | 228 |
| Msa0788680 | AT3G11680.1 | 39.308 | 318 | 180 | 5 | 5 | 321 | 41 | 346 | 1.41e-65 | 220 |
| Msa0788680 | AT3G11680.2 | 39.308 | 318 | 180 | 5 | 5 | 321 | 43 | 348 | 1.44e-65 | 220 |
| Msa0788680 | AT2G27240.2 | 34.663 | 326 | 205 | 5 | 5 | 329 | 18 | 336 | 9.13e-65 | 218 |
| Msa0788680 | AT5G46610.3 | 29.200 | 500 | 276 | 10 | 1 | 492 | 42 | 471 | 4.60e-63 | 214 |
| Msa0788680 | AT2G27240.1 | 33.429 | 350 | 203 | 7 | 5 | 329 | 18 | 362 | 1.02e-61 | 211 |
Find 136 sgRNAs with CRISPR-Local
Find 394 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGTGCTCACCATTATATTAT+TGG | 0.169950 | 5_2:+75938208 | None:intergenic |
| GTTTAATTGTTTCAAATCTA+AGG | 0.221413 | 5_2:-75932227 | Msa0788680:CDS |
| ACTCAGGCATTGTGCATTTA+TGG | 0.225741 | 5_2:-75933834 | Msa0788680:CDS |
| ACAATGAAGGCTTATGAATA+TGG | 0.228453 | 5_2:-75934770 | Msa0788680:CDS |
| TATTGTTACGTTATTGTATC+TGG | 0.230169 | 5_2:-75934725 | Msa0788680:CDS |
| TGAGAAACATTCTCGTTTCT+TGG | 0.242314 | 5_2:+75932661 | None:intergenic |
| TTCTCACAGGGTACCCAAAC+TGG | 0.269181 | 5_2:-75937986 | Msa0788680:five_prime_UTR |
| AGGTGAGAAAGCAAAGTTTA+AGG | 0.271199 | 5_2:-75932296 | Msa0788680:CDS |
| AAAGGTCTAAACAGAGGATT+AGG | 0.284845 | 5_2:-75935019 | Msa0788680:CDS |
| ATGTGTGCATATATCCAATA+TGG | 0.288826 | 5_2:-75934619 | Msa0788680:CDS |
| GGATGAAGAAAGACATTTCT+TGG | 0.297160 | 5_2:-75932623 | Msa0788680:CDS |
| AATGCAGAGCTGTGGGAAAT+AGG | 0.303810 | 5_2:-75932691 | Msa0788680:CDS |
| TCATCATCGTCGTCGGATTC+CGG | 0.332728 | 5_2:+75937868 | None:intergenic |
| ATGAAAGGTGGCGGTGGCGG+TGG | 0.333630 | 5_2:-75937916 | Msa0788680:five_prime_UTR |
| TTACCGACGAAAACATGTTT+AGG | 0.343971 | 5_2:-75932489 | Msa0788680:CDS |
| ACAAATCGGCATCCCTTTAC+CGG | 0.358676 | 5_2:-75937887 | Msa0788680:five_prime_UTR |
| ATTGGGAATGCTGTCAAAAT+TGG | 0.369611 | 5_2:-75934966 | Msa0788680:CDS |
| AGATCTTCACCGGCCCATAT+TGG | 0.373138 | 5_2:+75934605 | None:intergenic |
| TAATGAACTAGCACTTTCAT+AGG | 0.375230 | 5_2:+75932396 | None:intergenic |
| ATGGTTAGCATCTTCATTGT+AGG | 0.378298 | 5_2:-75934911 | Msa0788680:intron |
| TGTTGGGAAGTACTCTGTTT+GGG | 0.380632 | 5_2:-75937645 | Msa0788680:CDS |
| TCAGATGGGATCGTGGAGTT+TGG | 0.380757 | 5_2:-75937805 | Msa0788680:five_prime_UTR |
| AGCAGGTTTAATGATGTTAT+CGG | 0.382986 | 5_2:+75932519 | None:intergenic |
| TATTCATAAGCCTTCATTGT+TGG | 0.386844 | 5_2:+75934773 | None:intergenic |
| GTGACGGAAGGAACCCAGTT+TGG | 0.388277 | 5_2:+75937972 | None:intergenic |
| TTTCTTCATCCATTTGTAAG+AGG | 0.389222 | 5_2:+75932635 | None:intergenic |
| GGAGGACTTGCTTTAGCATT+GGG | 0.398305 | 5_2:-75934983 | Msa0788680:CDS |
| ATTACTCACCAATAATATAA+TGG | 0.404454 | 5_2:-75938216 | Msa0788680:five_prime_UTR |
| TTCCTGTGATGTTATTAGTT+CGG | 0.413745 | 5_2:+75938279 | None:intergenic |
| ATGTTGGGAAGTACTCTGTT+TGG | 0.413939 | 5_2:-75937646 | Msa0788680:CDS |
| TTACCTTCTTAAGCTCTTTG+CGG | 0.417975 | 5_2:+75932860 | None:intergenic |
| TCGTCGTCGGATTCCGGTAA+AGG | 0.418624 | 5_2:+75937874 | None:intergenic |
| GCTGAAAACACAAACTTCCT+TGG | 0.420798 | 5_2:+75937731 | None:intergenic |
| AACAACCGTTTCCGGATGTT+GGG | 0.441325 | 5_2:-75937661 | Msa0788680:CDS |
| TTCTCAAGACCTCTTACAAA+TGG | 0.444082 | 5_2:-75932644 | Msa0788680:CDS |
| CTGTCAAAATTGGCTGGACC+TGG | 0.444488 | 5_2:-75934956 | Msa0788680:CDS |
| AGATACAATAACGTAACAAT+AGG | 0.444661 | 5_2:+75934727 | None:intergenic |
| AGCTGTGGGAAATAGGTAAC+AGG | 0.447700 | 5_2:-75932684 | Msa0788680:CDS |
| CAACAAGAACTTGTAACATC+TGG | 0.450503 | 5_2:-75932262 | Msa0788680:CDS |
| AAACAACCGTTTCCGGATGT+TGG | 0.451682 | 5_2:-75937662 | Msa0788680:CDS |
| GGGGTTTGTTTGAAGATTGT+GGG | 0.451809 | 5_2:+75938081 | None:intergenic |
| AGGGGTTTGTTTGAAGATTG+TGG | 0.454993 | 5_2:+75938080 | None:intergenic |
| TGACGGAAGGAACCCAGTTT+GGG | 0.457037 | 5_2:+75937973 | None:intergenic |
| TAGAAAGAAAGTTGATCTAC+TGG | 0.457831 | 5_2:+75938156 | None:intergenic |
| GCAGGTTTAATGATGTTATC+GGG | 0.463058 | 5_2:+75932520 | None:intergenic |
| ACAATTTCTTCCCACTGTCC+AGG | 0.463381 | 5_2:+75934938 | None:intergenic |
| AAGAATTTGAAACGTGTGGC+GGG | 0.464080 | 5_2:-75937782 | Msa0788680:five_prime_UTR |
| TGGAGGACTTGCTTTAGCAT+TGG | 0.464724 | 5_2:-75934984 | Msa0788680:CDS |
| ATGTATACTTTCTGAAATAC+AGG | 0.465569 | 5_2:-75933795 | Msa0788680:intron |
| GGCGGGGAAAGCATGGGAGA+TGG | 0.469847 | 5_2:-75937765 | Msa0788680:exon |
| GTGGGAAGAAATTGTAATCA+TGG | 0.470172 | 5_2:-75934930 | Msa0788680:CDS |
| TATCGTATTCAACACAGTTA+AGG | 0.478209 | 5_2:+75934141 | None:intergenic |
| GCGTAGAACTTTAGTCGCTT+CGG | 0.478291 | 5_2:+75932834 | None:intergenic |
| TGTGATGTTATTAGTTCGGC+TGG | 0.478782 | 5_2:+75938283 | None:intergenic |
| TCGTCGGTAACAACATTAGC+AGG | 0.490901 | 5_2:+75932502 | None:intergenic |
| GCGGGGAAAGCATGGGAGAT+GGG | 0.493929 | 5_2:-75937764 | Msa0788680:exon |
| GGCGGTGGGTATTCACAAAT+CGG | 0.497636 | 5_2:-75937901 | Msa0788680:five_prime_UTR |
| AAAACTTGTCTCTTCTCCGC+TGG | 0.500088 | 5_2:+75932883 | None:intergenic |
| AGAAGATGCACCAACAAAAG+TGG | 0.500956 | 5_2:-75932431 | Msa0788680:CDS |
| AACGTGTGGCGGGGAAAGCA+TGG | 0.504246 | 5_2:-75937772 | Msa0788680:five_prime_UTR |
| TCAATGAAAGGTGGCGGTGG+CGG | 0.508318 | 5_2:-75937919 | Msa0788680:five_prime_UTR |
| ACAGAGTACTTCCCAACATC+CGG | 0.511401 | 5_2:+75937650 | None:intergenic |
| TTTCCGCAAAGAGCTTAAGA+AGG | 0.514375 | 5_2:-75932863 | Msa0788680:CDS |
| ATTGTATCTGGATATCGAAC+CGG | 0.516050 | 5_2:-75934713 | Msa0788680:CDS |
| TGAAAGGTGGCGGTGGCGGT+GGG | 0.518253 | 5_2:-75937915 | Msa0788680:five_prime_UTR |
| CTAATAACATCACAGGAAAA+CGG | 0.518493 | 5_2:-75938274 | Msa0788680:five_prime_UTR |
| CTTGGTGCTGCTGTATCTGT+TGG | 0.524842 | 5_2:-75934647 | Msa0788680:CDS |
| CCATGATGCAATCTTCTCAC+AGG | 0.526047 | 5_2:-75937999 | Msa0788680:five_prime_UTR |
| TTTGTGTTGTAACTTGAAAG+TGG | 0.527242 | 5_2:+75938126 | None:intergenic |
| TACTTCCCAACATCCGGAAA+CGG | 0.527916 | 5_2:+75937656 | None:intergenic |
| TTGTAACATCTGGTTGGACT+AGG | 0.528986 | 5_2:-75932252 | Msa0788680:CDS |
| TGCTGTATGAAGAAAGTCTC+CGG | 0.530779 | 5_2:+75934694 | None:intergenic |
| GCATTGTGCATTTATGGTCA+TGG | 0.531427 | 5_2:-75933828 | Msa0788680:CDS |
| GGATTAGGGACTTTATCAGC+TGG | 0.536839 | 5_2:-75935004 | Msa0788680:CDS |
| ACAAAATGTTTAGATATCCA+TGG | 0.538110 | 5_2:-75933883 | Msa0788680:CDS |
| ATACTTTGTAACATGTGTCA+TGG | 0.538847 | 5_2:-75932188 | Msa0788680:three_prime_UTR |
| TTCAAGGAAACTGTGACGGA+AGG | 0.540338 | 5_2:+75937960 | None:intergenic |
| TGGTGAGTAATAGAAGACTT+TGG | 0.541942 | 5_2:+75938228 | None:intergenic |
| GGAATGCTGTCAAAATTGGC+TGG | 0.542934 | 5_2:-75934962 | Msa0788680:CDS |
| TTCTTGTAAATGCAGAGCTG+TGG | 0.543062 | 5_2:-75932699 | Msa0788680:CDS |
| CAAGTTCTTGTTGTTCAAGA+GGG | 0.543303 | 5_2:+75932272 | None:intergenic |
| GCTATCTGGGAGCCACCTCA+TGG | 0.545299 | 5_2:-75933911 | Msa0788680:CDS |
| GTCGTCTTTGAGTTCAGTAT+AGG | 0.545881 | 5_2:-75937605 | Msa0788680:intron |
| TACAAGCACAGAAGATGCAT+TGG | 0.549163 | 5_2:-75934042 | Msa0788680:intron |
| GTATCAAGCTTCTGATGATG+TGG | 0.550964 | 5_2:-75934096 | Msa0788680:CDS |
| TTGTGTTGTAACTTGAAAGT+GGG | 0.551479 | 5_2:+75938127 | None:intergenic |
| GGCGTAGCAACATCATTAGA+AGG | 0.551490 | 5_2:-75934554 | Msa0788680:intron |
| TGTGTGCATATATCCAATAT+GGG | 0.552034 | 5_2:-75934618 | Msa0788680:CDS |
| AAAACTATATCCAACAATGA+AGG | 0.561439 | 5_2:-75934783 | Msa0788680:CDS |
| AAGAACTTGTAACATCTGGT+TGG | 0.564340 | 5_2:-75932258 | Msa0788680:CDS |
| TTGGAAGAATTTGAAACGTG+TGG | 0.565439 | 5_2:-75937786 | Msa0788680:five_prime_UTR |
| GGGTTTGTTTGAAGATTGTG+GGG | 0.566930 | 5_2:+75938082 | None:intergenic |
| TTAACTGTGTTGAATACGAT+AGG | 0.567618 | 5_2:-75934139 | Msa0788680:CDS |
| ACAAGTTCTTGTTGTTCAAG+AGG | 0.570038 | 5_2:+75932271 | None:intergenic |
| TCTTGTAAATGCAGAGCTGT+GGG | 0.571185 | 5_2:-75932698 | Msa0788680:CDS |
| ACTAAAGTTCTACGCGAACT+CGG | 0.571792 | 5_2:-75932826 | Msa0788680:CDS |
| AAGATTATGTAGATCTTCAC+CGG | 0.577973 | 5_2:+75934595 | None:intergenic |
| TCTCACAGGGTACCCAAACT+GGG | 0.578661 | 5_2:-75937985 | Msa0788680:five_prime_UTR |
| ACTACATTCGCCAACGACGG+TGG | 0.579632 | 5_2:-75937846 | Msa0788680:five_prime_UTR |
| GAAACGAAAACCACCGTCGT+TGG | 0.585444 | 5_2:+75937836 | None:intergenic |
| TTTACAAAAGCGGAGAGATG+TGG | 0.587460 | 5_2:+75932104 | None:intergenic |
| CTCATGTCAATGAAAGGTGG+CGG | 0.587784 | 5_2:-75937925 | Msa0788680:five_prime_UTR |
| ATGTCAATGAAAGGTGGCGG+TGG | 0.588834 | 5_2:-75937922 | Msa0788680:five_prime_UTR |
| AGCCGAACTAATAACATCAC+AGG | 0.589755 | 5_2:-75938281 | Msa0788680:five_prime_UTR |
| AAGGTCTAAACAGAGGATTA+GGG | 0.590676 | 5_2:-75935018 | Msa0788680:CDS |
| ATTGGCTGGACCTGGACAGT+GGG | 0.592025 | 5_2:-75934948 | Msa0788680:CDS |
| ACGTGTGGCGGGGAAAGCAT+GGG | 0.593925 | 5_2:-75937771 | Msa0788680:five_prime_UTR |
| AAGTTGATCTACTGGTCTGT+TGG | 0.594805 | 5_2:+75938164 | None:intergenic |
| AATGTAGTCATCATCGTCGT+CGG | 0.597630 | 5_2:+75937861 | None:intergenic |
| AGATGTGAAGACAAAGATGC+TGG | 0.600579 | 5_2:+75932463 | None:intergenic |
| GGTTTGTTTGAAGATTGTGG+GGG | 0.602599 | 5_2:+75938083 | None:intergenic |
| CTACTGGTCTGTTGGTAATG+CGG | 0.607189 | 5_2:+75938172 | None:intergenic |
| GTTTGTTTGAAGATTGTGGG+GGG | 0.607951 | 5_2:+75938084 | None:intergenic |
| GAAGAATTTGAAACGTGTGG+CGG | 0.609379 | 5_2:-75937783 | Msa0788680:five_prime_UTR |
| ATGACTACATTCGCCAACGA+CGG | 0.612796 | 5_2:-75937849 | Msa0788680:five_prime_UTR |
| AGAATTTGAAACGTGTGGCG+GGG | 0.614282 | 5_2:-75937781 | Msa0788680:five_prime_UTR |
| TTTATGGTCATGGCTATGCA+TGG | 0.621553 | 5_2:-75933818 | Msa0788680:CDS |
| GGCTAGGCTACAAAACCTTG+TGG | 0.623864 | 5_2:-75932335 | Msa0788680:CDS |
| TTAGGGACTTTATCAGCTGG+AGG | 0.624926 | 5_2:-75935001 | Msa0788680:CDS |
| CATGATGCAATCTTCTCACA+GGG | 0.626037 | 5_2:-75937998 | Msa0788680:five_prime_UTR |
| TAACTGTGTTGAATACGATA+GGG | 0.627098 | 5_2:-75934138 | Msa0788680:CDS |
| TGCATATATCCAATATGGGC+CGG | 0.627717 | 5_2:-75934614 | Msa0788680:CDS |
| AATTGGCTGGACCTGGACAG+TGG | 0.630767 | 5_2:-75934949 | Msa0788680:CDS |
| TCATGGAAAGATCTAAATGT+TGG | 0.633044 | 5_2:-75932171 | Msa0788680:three_prime_UTR |
| TTAAAGTAAGTGGAGCACTC+AGG | 0.643732 | 5_2:-75933850 | Msa0788680:CDS |
| TCTGATGATGTGGTTTACAG+CGG | 0.646018 | 5_2:-75934086 | Msa0788680:CDS |
| GCAGGAGCAACTCTTAGCAA+AGG | 0.647124 | 5_2:-75935037 | Msa0788680:intron |
| AGATGGGTGTGTCTGATCCA+AGG | 0.649272 | 5_2:-75937748 | Msa0788680:CDS |
| TGTGTTGTAACTTGAAAGTG+GGG | 0.649348 | 5_2:+75938128 | None:intergenic |
| AAACTCATGTCAATGAAAGG+TGG | 0.655476 | 5_2:-75937928 | Msa0788680:five_prime_UTR |
| ATTCTTCAAAAGAATCCACA+AGG | 0.658164 | 5_2:+75932320 | None:intergenic |
| AATAGGTGATCAAGAACACA+CGG | 0.669501 | 5_2:+75934744 | None:intergenic |
| CTTAGCAAAGGTCTAAACAG+AGG | 0.672271 | 5_2:-75935025 | Msa0788680:CDS |
| ATGGTGAGCACGACTAAACG+AGG | 0.681802 | 5_2:-75938197 | Msa0788680:five_prime_UTR |
| GTGTTGTAACTTGAAAGTGG+GGG | 0.700678 | 5_2:+75938129 | None:intergenic |
| CCTGTGAGAAGATTGCATCA+TGG | 0.710798 | 5_2:+75937999 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAATAAATAAATAAATAA+AGG | - | chr5_2:75934159-75934178 | Msa0788680:CDS | 0.0% |
| !!! | TATTTTATCAAATTATTACA+CGG | - | chr5_2:75932930-75932949 | Msa0788680:intron | 10.0% |
| !! | GAATATTATATAATATATGT+AGG | - | chr5_2:75933115-75933134 | Msa0788680:intron | 10.0% |
| !! | ATATTATATAATATATGTAG+GGG | - | chr5_2:75933117-75933136 | Msa0788680:intron | 10.0% |
| !!! | TATTTTATTTTTGCTTATAT+AGG | - | chr5_2:75933458-75933477 | Msa0788680:intron | 10.0% |
| !! | TATTATTTGTTTATTTAAAG+TGG | - | chr5_2:75933551-75933570 | Msa0788680:intron | 10.0% |
| !! | TTTGAAAACTAAAAAATAAT+CGG | + | chr5_2:75933870-75933889 | None:intergenic | 10.0% |
| !! | ATGAAGAAATAAATAAATAA+AGG | - | chr5_2:75934071-75934090 | Msa0788680:CDS | 10.0% |
| !! | TTACTTATTTATTTATTTAC+TGG | + | chr5_2:75934113-75934132 | None:intergenic | 10.0% |
| !! | GTAAATAAATAAATAAGTAA+AGG | - | chr5_2:75934113-75934132 | Msa0788680:CDS | 10.0% |
| !!! | ATTAAAATTTACAACATTTT+AGG | - | chr5_2:75935891-75935910 | Msa0788680:intron | 10.0% |
| !! | ATATATATATATGTCTGTTA+CGG | + | chr5_2:75932886-75932905 | None:intergenic | 15.0% |
| !!! | ATTTTATCAAATTATTACAC+GGG | - | chr5_2:75932931-75932950 | Msa0788680:intron | 15.0% |
| !! | AATGCATCTAATTTAAATTA+GGG | + | chr5_2:75933422-75933441 | None:intergenic | 15.0% |
| !! | CTAAAAATAGAAACAAATTT+CGG | + | chr5_2:75933666-75933685 | None:intergenic | 15.0% |
| !! | AAATTAAACAACATTAACAT+AGG | + | chr5_2:75934249-75934268 | None:intergenic | 15.0% |
| !!! | ATAAAATCATTTCAAGTTTA+AGG | + | chr5_2:75934674-75934693 | None:intergenic | 15.0% |
| !! | TTTCACTTATAAACAATAAT+TGG | - | chr5_2:75935317-75935336 | Msa0788680:intron | 15.0% |
| !! | AAAAATTATGTTAAAGTAAG+TGG | - | chr5_2:75936530-75936549 | Msa0788680:intron | 15.0% |
| !! | TACTTATTATGAAGTATATA+CGG | + | chr5_2:75937120-75937139 | None:intergenic | 15.0% |
| !! | AAATTTAAATACTAATCAAG+TGG | + | chr5_2:75937407-75937426 | None:intergenic | 15.0% |
| !! | ATTACTCACCAATAATATAA+TGG | - | chr5_2:75932174-75932193 | Msa0788680:three_prime_UTR | 20.0% |
| !!! | TTTTATCAAATTATTACACG+GGG | - | chr5_2:75932932-75932951 | Msa0788680:intron | 20.0% |
| !! | CAATGCATCTAATTTAAATT+AGG | + | chr5_2:75933423-75933442 | None:intergenic | 20.0% |
| !! | ATTGTGAATGTTTCTTTATT+TGG | + | chr5_2:75933508-75933527 | None:intergenic | 20.0% |
| !!! | TTAGTTTTCAAAATTACAAG+TGG | - | chr5_2:75933878-75933897 | Msa0788680:CDS | 20.0% |
| !!! | TTTTATATAAAAAAGTGGGA+AGG | - | chr5_2:75933908-75933927 | Msa0788680:CDS | 20.0% |
| !! | AAATACTGCTAAATTATCTT+CGG | + | chr5_2:75934350-75934369 | None:intergenic | 20.0% |
| !! | TAATAGTATTCAATTTGTGA+TGG | - | chr5_2:75934375-75934394 | Msa0788680:intron | 20.0% |
| !!! | ACAAACTGGTTTATTTTATT+AGG | - | chr5_2:75934809-75934828 | Msa0788680:intron | 20.0% |
| !!! | TTATTTTATTAGGTTGACTT+AGG | - | chr5_2:75934819-75934838 | Msa0788680:intron | 20.0% |
| !! | TTCTATCAAAAACCATATTT+GGG | - | chr5_2:75934956-75934975 | Msa0788680:CDS | 20.0% |
| !! | TAGAAAAGTTAGTAGAAAAT+AGG | + | chr5_2:75935136-75935155 | None:intergenic | 20.0% |
| !! | TAGATGGTTATTACAAATTA+AGG | + | chr5_2:75936144-75936163 | None:intergenic | 20.0% |
| !! | AAACTAAATGTTATAGTAGA+TGG | + | chr5_2:75936160-75936179 | None:intergenic | 20.0% |
| !!! | TCTACTATAACATTTAGTTT+TGG | - | chr5_2:75936160-75936179 | Msa0788680:intron | 20.0% |
| !!! | ATAACTTTAAGTTTCTTTTC+AGG | - | chr5_2:75936211-75936230 | Msa0788680:intron | 20.0% |
| !!! | ACTTTAACATAATTTTTCCA+TGG | + | chr5_2:75936527-75936546 | None:intergenic | 20.0% |
| !! | ATTTGTACTTTACAATCAAT+AGG | + | chr5_2:75936878-75936897 | None:intergenic | 20.0% |
| !! | CAATTATATCATTATGTATG+TGG | - | chr5_2:75937073-75937092 | Msa0788680:intron | 20.0% |
| !! | ATACATGTATCTTTACTATT+TGG | - | chr5_2:75937276-75937295 | Msa0788680:intron | 20.0% |
| !! | GTTTAATTGTTTCAAATCTA+AGG | - | chr5_2:75938163-75938182 | Msa0788680:five_prime_UTR | 20.0% |
| !!! | TGAGTTTTTCCTTTTTTTCA+AGG | + | chr5_2:75932449-75932468 | None:intergenic | 25.0% |
| ! | TTTATCAAATTATTACACGG+GGG | - | chr5_2:75932933-75932952 | Msa0788680:intron | 25.0% |
| !! | TTATTCCATATATTTGAGAC+CGG | + | chr5_2:75933050-75933069 | None:intergenic | 25.0% |
| ! | TTATATAATATATGTAGGGG+CGG | - | chr5_2:75933120-75933139 | Msa0788680:intron | 25.0% |
| ! | GTATCCTTAAAAATGTCTTA+AGG | + | chr5_2:75933268-75933287 | None:intergenic | 25.0% |
| !!! | TTATGTCTTGATAGTTTGTT+TGG | + | chr5_2:75933751-75933770 | None:intergenic | 25.0% |
| ! | TTAATTAGCAAATTTGACCA+TGG | - | chr5_2:75934202-75934221 | Msa0788680:intron | 25.0% |
| ! | GTTCTATCAAAAACCATATT+TGG | - | chr5_2:75934955-75934974 | Msa0788680:CDS | 25.0% |
| !! | TCTACTAACTTTTCTACTAT+AGG | - | chr5_2:75935140-75935159 | Msa0788680:intron | 25.0% |
| ! | AAAACTATATCCAACAATGA+AGG | - | chr5_2:75935607-75935626 | Msa0788680:intron | 25.0% |
| ! | AGATACAATAACGTAACAAT+AGG | + | chr5_2:75935666-75935685 | None:intergenic | 25.0% |
| ! | TATTGTTACGTTATTGTATC+TGG | - | chr5_2:75935665-75935684 | Msa0788680:intron | 25.0% |
| ! | ATAAGCAAGAAAAGTCTATT+GGG | + | chr5_2:75935867-75935886 | None:intergenic | 25.0% |
| ! | AATAAGCAAGAAAAGTCTAT+TGG | + | chr5_2:75935868-75935887 | None:intergenic | 25.0% |
| ! | AATAAGCTGAAAATAGCTTA+TGG | + | chr5_2:75935988-75936007 | None:intergenic | 25.0% |
| !! | ATTAAGTTGTTTATCCAAAC+AGG | - | chr5_2:75936117-75936136 | Msa0788680:intron | 25.0% |
| ! | CTGATAACTTAAGTAGAAAA+AGG | + | chr5_2:75936379-75936398 | None:intergenic | 25.0% |
| ! | ACAAAATGTTTAGATATCCA+TGG | - | chr5_2:75936507-75936526 | Msa0788680:intron | 25.0% |
| !!! | ATGTATACTTTCTGAAATAC+AGG | - | chr5_2:75936595-75936614 | Msa0788680:intron | 25.0% |
| !!! | TTTACTTCATTTTTTCGTGT+CGG | - | chr5_2:75936671-75936690 | Msa0788680:intron | 25.0% |
| !! | ATCTAACCATTTTGCTTTAT+AGG | - | chr5_2:75936837-75936856 | Msa0788680:intron | 25.0% |
| !! | GTTTTTCCTATAAAGCAAAA+TGG | + | chr5_2:75936846-75936865 | None:intergenic | 25.0% |
| ! | ATCAAATTCAAGGAGATATA+TGG | - | chr5_2:75936968-75936987 | Msa0788680:intron | 25.0% |
| !! | TTGTGATAGTAGTTTGTAAT+AGG | - | chr5_2:75937045-75937064 | Msa0788680:intron | 25.0% |
| !!! | ATCACTTTTGATTGAATTTG+TGG | - | chr5_2:75938034-75938053 | Msa0788680:five_prime_UTR | 25.0% |
| TTCCTGTGATGTTATTAGTT+CGG | + | chr5_2:75932114-75932133 | None:intergenic | 30.0% | |
| CTAATAACATCACAGGAAAA+CGG | - | chr5_2:75932116-75932135 | Msa0788680:three_prime_UTR | 30.0% | |
| ! | TAGAAAGAAAGTTGATCTAC+TGG | + | chr5_2:75932237-75932256 | None:intergenic | 30.0% |
| TTGTGTTGTAACTTGAAAGT+GGG | + | chr5_2:75932266-75932285 | None:intergenic | 30.0% | |
| TTTGTGTTGTAACTTGAAAG+TGG | + | chr5_2:75932267-75932286 | None:intergenic | 30.0% | |
| TGGAGATGAAAAATGAAAGA+GGG | + | chr5_2:75932332-75932351 | None:intergenic | 30.0% | |
| TTGGAGATGAAAAATGAAAG+AGG | + | chr5_2:75932333-75932352 | None:intergenic | 30.0% | |
| !!! | TTTTTTCAAGGAAACTGTGA+CGG | + | chr5_2:75932437-75932456 | None:intergenic | 30.0% |
| TCACAGTTTCCTTGAAAAAA+AGG | - | chr5_2:75932437-75932456 | Msa0788680:CDS | 30.0% | |
| GAAAAACTCATGTCAATGAA+AGG | - | chr5_2:75932459-75932478 | Msa0788680:CDS | 30.0% | |
| ! | TTTTCTTAAACAACCGTTTC+CGG | - | chr5_2:75932721-75932740 | Msa0788680:CDS | 30.0% |
| CATTGTTGTAGTGTCTTAAT+CGG | - | chr5_2:75932977-75932996 | Msa0788680:intron | 30.0% | |
| ! | TAAGATGAATTCTAGCTACT+AGG | - | chr5_2:75933176-75933195 | Msa0788680:intron | 30.0% |
| ! | AGTGCCTTAAGACATTTTTA+AGG | - | chr5_2:75933261-75933280 | Msa0788680:intron | 30.0% |
| TAGAAACAAATTTCGGTTCA+TGG | + | chr5_2:75933659-75933678 | None:intergenic | 30.0% | |
| !! | AATAGTGTGAGTTAGTTTGT+TGG | + | chr5_2:75933719-75933738 | None:intergenic | 30.0% |
| TGAAAAACACAGTCAATCAA+TGG | - | chr5_2:75933795-75933814 | Msa0788680:intron | 30.0% | |
| !! | ATCACAACTTTTGAGAATGA+TGG | - | chr5_2:75933957-75933976 | Msa0788680:intron | 30.0% |
| TAATCCAATTGTGAGAATGA+TGG | - | chr5_2:75933986-75934005 | Msa0788680:intron | 30.0% | |
| ! | TTTAATTTAGCTGCATATCG+CGG | - | chr5_2:75934261-75934280 | Msa0788680:intron | 30.0% |
| ! | CAAACTCGATTTGTAAATTG+AGG | + | chr5_2:75934636-75934655 | None:intergenic | 30.0% |
| ! | AAGCTTGATGAAAGGTTTTT+AGG | + | chr5_2:75934852-75934871 | None:intergenic | 30.0% |
| AACCATTCGAAAAGATTTAG+AGG | + | chr5_2:75934995-75935014 | None:intergenic | 30.0% | |
| ! | TTTTCGAATGGTTTCTCTAA+TGG | - | chr5_2:75935002-75935021 | Msa0788680:CDS | 30.0% |
| ! | GTTTCTCTAATGGTTTTCTT+AGG | - | chr5_2:75935012-75935031 | Msa0788680:CDS | 30.0% |
| TGTAAGAAGAGTAGATCAAA+TGG | + | chr5_2:75935069-75935088 | None:intergenic | 30.0% | |
| TTGATCTACTCTTCTTACAA+CGG | - | chr5_2:75935070-75935089 | Msa0788680:intron | 30.0% | |
| TAGTAGAAAATAGGCTTAGA+TGG | + | chr5_2:75935127-75935146 | None:intergenic | 30.0% | |
| AGGTATAAGCTAAGGAAAAA+AGG | + | chr5_2:75935535-75935554 | None:intergenic | 30.0% | |
| GAAAAACAAGGTATAAGCTA+AGG | + | chr5_2:75935543-75935562 | None:intergenic | 30.0% | |
| AGCATACTATCAGAAAAACA+AGG | + | chr5_2:75935555-75935574 | None:intergenic | 30.0% | |
| ! | TAGTATGCTATGTGATTTGT+AGG | - | chr5_2:75935566-75935585 | Msa0788680:intron | 30.0% |
| !! | TGGATATAGTTTTGCATAAG+TGG | + | chr5_2:75935600-75935619 | None:intergenic | 30.0% |
| TATTCATAAGCCTTCATTGT+TGG | + | chr5_2:75935620-75935639 | None:intergenic | 30.0% | |
| ACAATGAAGGCTTATGAATA+TGG | - | chr5_2:75935620-75935639 | Msa0788680:intron | 30.0% | |
| ATGTGTGCATATATCCAATA+TGG | - | chr5_2:75935771-75935790 | Msa0788680:intron | 30.0% | |
| TGTGTGCATATATCCAATAT+GGG | - | chr5_2:75935772-75935791 | Msa0788680:intron | 30.0% | |
| AAGATTATGTAGATCTTCAC+CGG | + | chr5_2:75935798-75935817 | None:intergenic | 30.0% | |
| CTTGTTGCAAAAAATTTCAC+AGG | - | chr5_2:75935815-75935834 | Msa0788680:intron | 30.0% | |
| TTACAAATTAAGGTCCTGTT+TGG | + | chr5_2:75936134-75936153 | None:intergenic | 30.0% | |
| TATCGTATTCAACACAGTTA+AGG | + | chr5_2:75936252-75936271 | None:intergenic | 30.0% | |
| TTAACTGTGTTGAATACGAT+AGG | - | chr5_2:75936251-75936270 | Msa0788680:intron | 30.0% | |
| TAACTGTGTTGAATACGATA+GGG | - | chr5_2:75936252-75936271 | Msa0788680:intron | 30.0% | |
| ! | TGATACGTAAGAATTTTCGA+TGG | + | chr5_2:75936280-75936299 | None:intergenic | 30.0% |
| ! | AGCAAAATGGTTAGATTTTG+TGG | + | chr5_2:75936833-75936852 | None:intergenic | 30.0% |
| CTTTACAATCAATAGGAACT+GGG | + | chr5_2:75936871-75936890 | None:intergenic | 30.0% | |
| ACTTTACAATCAATAGGAAC+TGG | + | chr5_2:75936872-75936891 | None:intergenic | 30.0% | |
| TCCTTGAATTTGATATGAAG+GGG | + | chr5_2:75936962-75936981 | None:intergenic | 30.0% | |
| CTCCTTGAATTTGATATGAA+GGG | + | chr5_2:75936963-75936982 | None:intergenic | 30.0% | |
| TCTCCTTGAATTTGATATGA+AGG | + | chr5_2:75936964-75936983 | None:intergenic | 30.0% | |
| TAAGTAACTAGAATACTGCT+AGG | - | chr5_2:75937134-75937153 | Msa0788680:intron | 30.0% | |
| TAGTAAACGTGTATTTGCAT+AGG | + | chr5_2:75937463-75937482 | None:intergenic | 30.0% | |
| ! | AAACCTCCTTTTTGTGAAAT+AGG | - | chr5_2:75937482-75937501 | Msa0788680:intron | 30.0% |
| CGGTAACAAAGTTAAAAAGA+TGG | - | chr5_2:75937584-75937603 | Msa0788680:intron | 30.0% | |
| GTTAAAAAGATGGAGAAACT+AGG | - | chr5_2:75937594-75937613 | Msa0788680:intron | 30.0% | |
| TTTCTTCATCCATTTGTAAG+AGG | + | chr5_2:75937758-75937777 | None:intergenic | 30.0% | |
| AGTTAGAGTTCCAAAAAGTT+GGG | - | chr5_2:75937830-75937849 | Msa0788680:five_prime_UTR | 30.0% | |
| AGCAGGTTTAATGATGTTAT+CGG | + | chr5_2:75937874-75937893 | None:intergenic | 30.0% | |
| ! | TTTCCTAAACATGTTTTCGT+CGG | + | chr5_2:75937907-75937926 | None:intergenic | 30.0% |
| !! | TTTGATTCTTCCACTTTTGT+TGG | + | chr5_2:75937972-75937991 | None:intergenic | 30.0% |
| TAATGAACTAGCACTTTCAT+AGG | + | chr5_2:75937997-75938016 | None:intergenic | 30.0% | |
| !! | TTTTGATTGAATTTGTGGCT+AGG | - | chr5_2:75938039-75938058 | Msa0788680:five_prime_UTR | 30.0% |
| ATTCTTCAAAAGAATCCACA+AGG | + | chr5_2:75938073-75938092 | None:intergenic | 30.0% | |
| !! | GTGGATTCTTTTGAAGAATT+AGG | - | chr5_2:75938074-75938093 | Msa0788680:five_prime_UTR | 30.0% |
| ATACTTTGTAACATGTGTCA+TGG | - | chr5_2:75938202-75938221 | Msa0788680:five_prime_UTR | 30.0% | |
| TCATGGAAAGATCTAAATGT+TGG | - | chr5_2:75938219-75938238 | Msa0788680:five_prime_UTR | 30.0% | |
| TGGTGAGTAATAGAAGACTT+TGG | + | chr5_2:75932165-75932184 | None:intergenic | 35.0% | |
| CGTGCTCACCATTATATTAT+TGG | + | chr5_2:75932185-75932204 | None:intergenic | 35.0% | |
| TGTGTTGTAACTTGAAAGTG+GGG | + | chr5_2:75932265-75932284 | None:intergenic | 35.0% | |
| GGAGATGAAAAATGAAAGAG+GGG | + | chr5_2:75932331-75932350 | None:intergenic | 35.0% | |
| !! | ATGAGTTTTTGAGGAATCTG+GGG | + | chr5_2:75932369-75932388 | None:intergenic | 35.0% |
| !! | GATGAGTTTTTGAGGAATCT+GGG | + | chr5_2:75932370-75932389 | None:intergenic | 35.0% |
| !! | TGATGAGTTTTTGAGGAATC+TGG | + | chr5_2:75932371-75932390 | None:intergenic | 35.0% |
| !! | ATCATGGTGATGAGTTTTTG+AGG | + | chr5_2:75932378-75932397 | None:intergenic | 35.0% |
| AAACTCATGTCAATGAAAGG+TGG | - | chr5_2:75932462-75932481 | Msa0788680:CDS | 35.0% | |
| ! | TTGGAAGAATTTGAAACGTG+TGG | - | chr5_2:75932604-75932623 | Msa0788680:CDS | 35.0% |
| ! | TTTGTGTTTTCAGCGAAGAT+GGG | - | chr5_2:75932668-75932687 | Msa0788680:CDS | 35.0% |
| ! | AGACATTCGATCAGAAGTAT+CGG | + | chr5_2:75932847-75932866 | None:intergenic | 35.0% |
| AGACACTACAACAATGTCAT+TGG | + | chr5_2:75932973-75932992 | None:intergenic | 35.0% | |
| AATGCTAATAAGTGCCCTAA+GGG | + | chr5_2:75933398-75933417 | None:intergenic | 35.0% | |
| AAATGCTAATAAGTGCCCTA+AGG | + | chr5_2:75933399-75933418 | None:intergenic | 35.0% | |
| TTGCTTATATAGGAGACTAG+AGG | - | chr5_2:75933468-75933487 | Msa0788680:intron | 35.0% | |
| ATCACCATCATTCTCACAAT+TGG | + | chr5_2:75933993-75934012 | None:intergenic | 35.0% | |
| ATTAGCAAATTTGACCATGG+TGG | - | chr5_2:75934205-75934224 | Msa0788680:intron | 35.0% | |
| TTAGCAAATTTGACCATGGT+GGG | - | chr5_2:75934206-75934225 | Msa0788680:intron | 35.0% | |
| !! | CGGATTATTCTAGAATCACT+TGG | - | chr5_2:75934281-75934300 | Msa0788680:intron | 35.0% |
| GAAAATATGCTCTTCAACCA+TGG | - | chr5_2:75934306-75934325 | Msa0788680:intron | 35.0% | |
| ! | ATTTGTGATGGTGAAATCAC+AGG | - | chr5_2:75934387-75934406 | Msa0788680:intron | 35.0% |
| ACAATCTTCACCTTACAAGT+TGG | - | chr5_2:75934592-75934611 | Msa0788680:CDS | 35.0% | |
| GATCTATTCAAGCCATATGT+CGG | + | chr5_2:75934738-75934757 | None:intergenic | 35.0% | |
| GAAGTTGACACTTTACAAAC+TGG | - | chr5_2:75934795-75934814 | Msa0788680:CDS | 35.0% | |
| !!! | GATGAAAGGTTTTTAGGTTC+TGG | + | chr5_2:75934846-75934865 | None:intergenic | 35.0% |
| CTTTCATCAAGCTTTCCATT+GGG | - | chr5_2:75934858-75934877 | Msa0788680:intron | 35.0% | |
| ! | TGGTTTTTGATAGAACGCTA+TGG | + | chr5_2:75934951-75934970 | None:intergenic | 35.0% |
| AGATTTAGAGGTCAATGAGT+TGG | + | chr5_2:75934983-75935002 | None:intergenic | 35.0% | |
| ! | GACCTCTAAATCTTTTCGAA+TGG | - | chr5_2:75934990-75935009 | Msa0788680:CDS | 35.0% |
| AAGAAGAGTAGATCAAATGG+AGG | + | chr5_2:75935066-75935085 | None:intergenic | 35.0% | |
| GAAAATAGGCTTAGATGGTT+TGG | + | chr5_2:75935122-75935141 | None:intergenic | 35.0% | |
| AGACTAGACATGATAGGATT+AGG | + | chr5_2:75935199-75935218 | None:intergenic | 35.0% | |
| ATTGGTCCATATATTTGTGC+AGG | - | chr5_2:75935335-75935354 | Msa0788680:intron | 35.0% | |
| AAAGGTCTAAACAGAGGATT+AGG | - | chr5_2:75935371-75935390 | Msa0788680:intron | 35.0% | |
| AAGGTCTAAACAGAGGATTA+GGG | - | chr5_2:75935372-75935391 | Msa0788680:intron | 35.0% | |
| ATTGGGAATGCTGTCAAAAT+TGG | - | chr5_2:75935424-75935443 | Msa0788680:intron | 35.0% | |
| GTGGGAAGAAATTGTAATCA+TGG | - | chr5_2:75935460-75935479 | Msa0788680:intron | 35.0% | |
| ATGGTTAGCATCTTCATTGT+AGG | - | chr5_2:75935479-75935498 | Msa0788680:intron | 35.0% | |
| AATAGGTGATCAAGAACACA+CGG | + | chr5_2:75935649-75935668 | None:intergenic | 35.0% | |
| ATTGTATCTGGATATCGAAC+CGG | - | chr5_2:75935677-75935696 | Msa0788680:intron | 35.0% | |
| ! | AGATTTTTGCTCATTGCTCT+TGG | - | chr5_2:75935725-75935744 | Msa0788680:intron | 35.0% |
| ! | TACAACATTTTAGGCCTGTT+TGG | - | chr5_2:75935900-75935919 | Msa0788680:intron | 35.0% |
| ! | ACAACATTTTAGGCCTGTTT+GGG | - | chr5_2:75935901-75935920 | Msa0788680:intron | 35.0% |
| !! | GAAGATGAGTTTTGCTATCT+GGG | - | chr5_2:75936466-75936485 | Msa0788680:intron | 35.0% |
| ! | AACATTTTGTAACGACCATG+AGG | + | chr5_2:75936497-75936516 | None:intergenic | 35.0% |
| CATAGAAAATGTTGCTACAC+AGG | + | chr5_2:75936623-75936642 | None:intergenic | 35.0% | |
| CAAGAATCAAACGTCATTTC+TGG | + | chr5_2:75936775-75936794 | None:intergenic | 35.0% | |
| CAGAAATGACGTTTGATTCT+TGG | - | chr5_2:75936773-75936792 | Msa0788680:intron | 35.0% | |
| CCTTGAATTTGATATGAAGG+GGG | + | chr5_2:75936961-75936980 | None:intergenic | 35.0% | |
| GTCTTAATGGTTTCCTGTAT+AGG | - | chr5_2:75937021-75937040 | Msa0788680:intron | 35.0% | |
| CTACTATCACAATCCTATAC+AGG | + | chr5_2:75937037-75937056 | None:intergenic | 35.0% | |
| ACCACAGATTGCAGAAAATA+GGG | - | chr5_2:75937182-75937201 | Msa0788680:intron | 35.0% | |
| GCTTAGTACTAAATCACGTA+TGG | - | chr5_2:75937244-75937263 | Msa0788680:intron | 35.0% | |
| TAGTACTAAATCACGTATGG+CGG | - | chr5_2:75937247-75937266 | Msa0788680:intron | 35.0% | |
| GCTTAGTACTAAATCACGTA+TGG | - | chr5_2:75937244-75937263 | Msa0788680:intron | 35.0% | |
| TAGTACTAAATCACGTATGG+CGG | - | chr5_2:75937247-75937266 | Msa0788680:intron | 35.0% | |
| CGGATATATATTAGCGCTAT+AGG | + | chr5_2:75937361-75937380 | None:intergenic | 35.0% | |
| !! | AAAGGAGTGTTGTCAAATAG+CGG | + | chr5_2:75937381-75937400 | None:intergenic | 35.0% |
| ATACTAATCAAGTGGTGCAA+AGG | + | chr5_2:75937399-75937418 | None:intergenic | 35.0% | |
| TTACCTTCTTAAGCTCTTTG+CGG | + | chr5_2:75937533-75937552 | None:intergenic | 35.0% | |
| TGAGAAACATTCTCGTTTCT+TGG | + | chr5_2:75937732-75937751 | None:intergenic | 35.0% | |
| TTCTCAAGACCTCTTACAAA+TGG | - | chr5_2:75937746-75937765 | Msa0788680:CDS | 35.0% | |
| GGATGAAGAAAGACATTTCT+TGG | - | chr5_2:75937767-75937786 | Msa0788680:exon | 35.0% | |
| CAGTTAGAGTTCCAAAAAGT+TGG | - | chr5_2:75937829-75937848 | Msa0788680:five_prime_UTR | 35.0% | |
| ! | AGACTTTCTTCCCAACTTTT+TGG | + | chr5_2:75937843-75937862 | None:intergenic | 35.0% |
| GCAGGTTTAATGATGTTATC+GGG | + | chr5_2:75937873-75937892 | None:intergenic | 35.0% | |
| TTACCGACGAAAACATGTTT+AGG | - | chr5_2:75937901-75937920 | Msa0788680:five_prime_UTR | 35.0% | |
| AGGTGAGAAAGCAAAGTTTA+AGG | - | chr5_2:75938094-75938113 | Msa0788680:five_prime_UTR | 35.0% | |
| !! | CAAGTTCTTGTTGTTCAAGA+GGG | + | chr5_2:75938121-75938140 | None:intergenic | 35.0% |
| !! | ACAAGTTCTTGTTGTTCAAG+AGG | + | chr5_2:75938122-75938141 | None:intergenic | 35.0% |
| CAACAAGAACTTGTAACATC+TGG | - | chr5_2:75938128-75938147 | Msa0788680:five_prime_UTR | 35.0% | |
| AAGAACTTGTAACATCTGGT+TGG | - | chr5_2:75938132-75938151 | Msa0788680:five_prime_UTR | 35.0% | |
| AGCCGAACTAATAACATCAC+AGG | - | chr5_2:75932109-75932128 | Msa0788680:three_prime_UTR | 40.0% | |
| ! | AAGTTGATCTACTGGTCTGT+TGG | + | chr5_2:75932229-75932248 | None:intergenic | 40.0% |
| GTGTTGTAACTTGAAAGTGG+GGG | + | chr5_2:75932264-75932283 | None:intergenic | 40.0% | |
| GTTTGTTTGAAGATTGTGGG+GGG | + | chr5_2:75932309-75932328 | None:intergenic | 40.0% | |
| ! | GGTTTGTTTGAAGATTGTGG+GGG | + | chr5_2:75932310-75932329 | None:intergenic | 40.0% |
| ! | GGGTTTGTTTGAAGATTGTG+GGG | + | chr5_2:75932311-75932330 | None:intergenic | 40.0% |
| ! | GGGGTTTGTTTGAAGATTGT+GGG | + | chr5_2:75932312-75932331 | None:intergenic | 40.0% |
| ! | AGGGGTTTGTTTGAAGATTG+TGG | + | chr5_2:75932313-75932332 | None:intergenic | 40.0% |
| !!! | GAATCTGGGGAAGTTTTTTG+AGG | + | chr5_2:75932356-75932375 | None:intergenic | 40.0% |
| CATGATGCAATCTTCTCACA+GGG | - | chr5_2:75932392-75932411 | Msa0788680:CDS | 40.0% | |
| AATGTAGTCATCATCGTCGT+CGG | + | chr5_2:75932532-75932551 | None:intergenic | 40.0% | |
| ! | TCGTTTCGAGGATTTTCAGA+TGG | - | chr5_2:75932570-75932589 | Msa0788680:CDS | 40.0% |
| ! | CGTTTCGAGGATTTTCAGAT+GGG | - | chr5_2:75932571-75932590 | Msa0788680:CDS | 40.0% |
| ! | GAAGAATTTGAAACGTGTGG+CGG | - | chr5_2:75932607-75932626 | Msa0788680:CDS | 40.0% |
| ! | AAGAATTTGAAACGTGTGGC+GGG | - | chr5_2:75932608-75932627 | Msa0788680:CDS | 40.0% |
| GCTGAAAACACAAACTTCCT+TGG | + | chr5_2:75932662-75932681 | None:intergenic | 40.0% | |
| ! | GTTTGTGTTTTCAGCGAAGA+TGG | - | chr5_2:75932667-75932686 | Msa0788680:CDS | 40.0% |
| !! | ATGTTGGGAAGTACTCTGTT+TGG | - | chr5_2:75932744-75932763 | Msa0788680:CDS | 40.0% |
| !! | TGTTGGGAAGTACTCTGTTT+GGG | - | chr5_2:75932745-75932764 | Msa0788680:CDS | 40.0% |
| ! | GTCGTCTTTGAGTTCAGTAT+AGG | - | chr5_2:75932785-75932804 | Msa0788680:CDS | 40.0% |
| CACTACAACAATGTCATTGG+TGG | + | chr5_2:75932970-75932989 | None:intergenic | 40.0% | |
| TCCATCCGGTCTCAAATATA+TGG | - | chr5_2:75933042-75933061 | Msa0788680:intron | 40.0% | |
| ! | TCCATATATTTGAGACCGGA+TGG | + | chr5_2:75933046-75933065 | None:intergenic | 40.0% |
| GTGAATAACTGTAGTGTCAG+AGG | + | chr5_2:75933154-75933173 | None:intergenic | 40.0% | |
| ACACTCAATGCATCGAGAAT+TGG | + | chr5_2:75933331-75933350 | None:intergenic | 40.0% | |
| !! | AGTTCTTAAAGAGTGCCCTT+AGG | - | chr5_2:75933380-75933399 | Msa0788680:intron | 40.0% |
| !! | GTTCTTAAAGAGTGCCCTTA+GGG | - | chr5_2:75933381-75933400 | Msa0788680:intron | 40.0% |
| ! | AACAATTTTCTGTCCCACCA+TGG | + | chr5_2:75934222-75934241 | None:intergenic | 40.0% |
| ! | ATCTTCGGTGTATCAAACCT+GGG | + | chr5_2:75934335-75934354 | None:intergenic | 40.0% |
| ! | TATCTTCGGTGTATCAAACC+TGG | + | chr5_2:75934336-75934355 | None:intergenic | 40.0% |
| CGCTTTACAACCAACTTGTA+AGG | + | chr5_2:75934605-75934624 | None:intergenic | 40.0% | |
| CATATGACAAGTCCGACATA+TGG | - | chr5_2:75934723-75934742 | Msa0788680:CDS | 40.0% | |
| CCAATGGAAAGCTTGATGAA+AGG | + | chr5_2:75934860-75934879 | None:intergenic | 40.0% | |
| CCTTTCATCAAGCTTTCCAT+TGG | - | chr5_2:75934857-75934876 | Msa0788680:intron | 40.0% | |
| ! | TGTTGTTGTTGTTGACCCAA+TGG | + | chr5_2:75934876-75934895 | None:intergenic | 40.0% |
| ! | CAATGAGTTGGACCCAAATA+TGG | + | chr5_2:75934971-75934990 | None:intergenic | 40.0% |
| TCTTCTTACAACGGCATCTA+CGG | - | chr5_2:75935079-75935098 | Msa0788680:intron | 40.0% | |
| GTGGTAAGACTAGACATGAT+AGG | + | chr5_2:75935205-75935224 | None:intergenic | 40.0% | |
| ! | TACTTGTCTTGTTGACCCAA+TGG | + | chr5_2:75935285-75935304 | None:intergenic | 40.0% |
| GTTGCTCCTGCACAAATATA+TGG | + | chr5_2:75935344-75935363 | None:intergenic | 40.0% | |
| CTTAGCAAAGGTCTAAACAG+AGG | - | chr5_2:75935365-75935384 | Msa0788680:intron | 40.0% | |
| TGCTGTATGAAGAAAGTCTC+CGG | + | chr5_2:75935699-75935718 | None:intergenic | 40.0% | |
| TGCATATATCCAATATGGGC+CGG | - | chr5_2:75935776-75935795 | Msa0788680:intron | 40.0% | |
| ATAAGTCGTTCTCGTAAGCT+CGG | + | chr5_2:75935958-75935977 | None:intergenic | 40.0% | |
| !! | GCTGTTTTCATAAGCTATGC+TGG | + | chr5_2:75936023-75936042 | None:intergenic | 40.0% |
| ! | GTATCAAGCTTCTGATGATG+TGG | - | chr5_2:75936294-75936313 | Msa0788680:intron | 40.0% |
| ! | TCTGATGATGTGGTTTACAG+CGG | - | chr5_2:75936304-75936323 | Msa0788680:intron | 40.0% |
| TACAAGCACAGAAGATGCAT+TGG | - | chr5_2:75936348-75936367 | Msa0788680:intron | 40.0% | |
| ! | GCGTTTGTGTGTTGTTGATT+CGG | - | chr5_2:75936444-75936463 | Msa0788680:intron | 40.0% |
| !! | GGAAGATGAGTTTTGCTATC+TGG | - | chr5_2:75936465-75936484 | Msa0788680:intron | 40.0% |
| ! | ATTTTGTAACGACCATGAGG+TGG | + | chr5_2:75936494-75936513 | None:intergenic | 40.0% |
| ! | TTAAAGTAAGTGGAGCACTC+AGG | - | chr5_2:75936540-75936559 | Msa0788680:intron | 40.0% |
| ! | ACTCAGGCATTGTGCATTTA+TGG | - | chr5_2:75936556-75936575 | Msa0788680:intron | 40.0% |
| GCATTGTGCATTTATGGTCA+TGG | - | chr5_2:75936562-75936581 | Msa0788680:intron | 40.0% | |
| TTTATGGTCATGGCTATGCA+TGG | - | chr5_2:75936572-75936591 | Msa0788680:intron | 40.0% | |
| GGGCAAAGGATAACAAAAAG+GGG | + | chr5_2:75936941-75936960 | None:intergenic | 40.0% | |
| GGGGCAAAGGATAACAAAAA+GGG | + | chr5_2:75936942-75936961 | None:intergenic | 40.0% | |
| ATTTGATATGAAGGGGGCAA+AGG | + | chr5_2:75936955-75936974 | None:intergenic | 40.0% | |
| CCCCCTTCATATCAAATTCA+AGG | - | chr5_2:75936958-75936977 | Msa0788680:intron | 40.0% | |
| GTGCTAAACTAGAGATGTTG+CGG | - | chr5_2:75936990-75937009 | Msa0788680:intron | 40.0% | |
| TGCTAAACTAGAGATGTTGC+GGG | - | chr5_2:75936991-75937010 | Msa0788680:intron | 40.0% | |
| GTAACTAGAATACTGCTAGG+TGG | - | chr5_2:75937137-75937156 | Msa0788680:intron | 40.0% | |
| GGTCAACAACATTGTGCAAA+GGG | + | chr5_2:75937165-75937184 | None:intergenic | 40.0% | |
| TGGTCAACAACATTGTGCAA+AGG | + | chr5_2:75937166-75937185 | None:intergenic | 40.0% | |
| GACCACAGATTGCAGAAAAT+AGG | - | chr5_2:75937181-75937200 | Msa0788680:intron | 40.0% | |
| CCACAGATTGCAGAAAATAG+GGG | - | chr5_2:75937183-75937202 | Msa0788680:intron | 40.0% | |
| GAGCCTATTTCACAAAAAGG+AGG | + | chr5_2:75937488-75937507 | None:intergenic | 40.0% | |
| CTGGAGCCTATTTCACAAAA+AGG | + | chr5_2:75937491-75937510 | None:intergenic | 40.0% | |
| ! | TTTTGTGAAATAGGCTCCAG+CGG | - | chr5_2:75937491-75937510 | Msa0788680:intron | 40.0% |
| TTTCCGCAAAGAGCTTAAGA+AGG | - | chr5_2:75937527-75937546 | Msa0788680:intron | 40.0% | |
| ACTAAAGTTCTACGCGAACT+CGG | - | chr5_2:75937564-75937583 | Msa0788680:intron | 40.0% | |
| TTCTTGTAAATGCAGAGCTG+TGG | - | chr5_2:75937691-75937710 | Msa0788680:CDS | 40.0% | |
| TCTTGTAAATGCAGAGCTGT+GGG | - | chr5_2:75937692-75937711 | Msa0788680:CDS | 40.0% | |
| AGATGTGAAGACAAAGATGC+TGG | + | chr5_2:75937930-75937949 | None:intergenic | 40.0% | |
| AGAAGATGCACCAACAAAAG+TGG | - | chr5_2:75937959-75937978 | Msa0788680:five_prime_UTR | 40.0% | |
| TTGTAACATCTGGTTGGACT+AGG | - | chr5_2:75938138-75938157 | Msa0788680:five_prime_UTR | 40.0% | |
| !! | CTACTGGTCTGTTGGTAATG+CGG | + | chr5_2:75932221-75932240 | None:intergenic | 45.0% |
| TGTAACTTGAAAGTGGGGGA+GGG | + | chr5_2:75932260-75932279 | None:intergenic | 45.0% | |
| TTGTAACTTGAAAGTGGGGG+AGG | + | chr5_2:75932261-75932280 | None:intergenic | 45.0% | |
| !!! | CTGGGGAAGTTTTTTGAGGT+TGG | + | chr5_2:75932352-75932371 | None:intergenic | 45.0% |
| CCTGTGAGAAGATTGCATCA+TGG | + | chr5_2:75932394-75932413 | None:intergenic | 45.0% | |
| CCATGATGCAATCTTCTCAC+AGG | - | chr5_2:75932391-75932410 | Msa0788680:CDS | 45.0% | |
| ! | TTCAAGGAAACTGTGACGGA+AGG | + | chr5_2:75932433-75932452 | None:intergenic | 45.0% |
| CTCATGTCAATGAAAGGTGG+CGG | - | chr5_2:75932465-75932484 | Msa0788680:CDS | 45.0% | |
| ACAAATCGGCATCCCTTTAC+CGG | - | chr5_2:75932503-75932522 | Msa0788680:CDS | 45.0% | |
| ATGACTACATTCGCCAACGA+CGG | - | chr5_2:75932541-75932560 | Msa0788680:CDS | 45.0% | |
| ! | AGGATTTTCAGATGGGATCG+TGG | - | chr5_2:75932578-75932597 | Msa0788680:CDS | 45.0% |
| ! | AGAATTTGAAACGTGTGGCG+GGG | - | chr5_2:75932609-75932628 | Msa0788680:CDS | 45.0% |
| !! | GTTTTCAGCGAAGATGGGTT+TGG | - | chr5_2:75932673-75932692 | Msa0788680:CDS | 45.0% |
| AAACAACCGTTTCCGGATGT+TGG | - | chr5_2:75932728-75932747 | Msa0788680:CDS | 45.0% | |
| AACAACCGTTTCCGGATGTT+GGG | - | chr5_2:75932729-75932748 | Msa0788680:CDS | 45.0% | |
| TACTTCCCAACATCCGGAAA+CGG | + | chr5_2:75932737-75932756 | None:intergenic | 45.0% | |
| ! | ACAGAGTACTTCCCAACATC+CGG | + | chr5_2:75932743-75932762 | None:intergenic | 45.0% |
| CTGATCGAATGTCTGTGTTC+CGG | - | chr5_2:75932853-75932872 | Msa0788680:CDS | 45.0% | |
| CAAGACACAACACGGTTACA+TGG | + | chr5_2:75933006-75933025 | None:intergenic | 45.0% | |
| CTACGAAGCAAGACACAACA+CGG | + | chr5_2:75933014-75933033 | None:intergenic | 45.0% | |
| TCGTAGTGACTTACTCCATC+CGG | - | chr5_2:75933028-75933047 | Msa0788680:intron | 45.0% | |
| AGTGGGAAGGAGAAACTTTG+TGG | - | chr5_2:75933921-75933940 | Msa0788680:CDS | 45.0% | |
| !! | TCCATGTTCTGCGTTGACTA+TGG | - | chr5_2:75934538-75934557 | Msa0788680:intron | 45.0% |
| TCCATAGTCAACGCAGAACA+TGG | + | chr5_2:75934542-75934561 | None:intergenic | 45.0% | |
| ATGTCGGACTTGTCATATGC+TGG | + | chr5_2:75934722-75934741 | None:intergenic | 45.0% | |
| ! | CAATCAAGCCTTATCCCACT+AGG | - | chr5_2:75934897-75934916 | Msa0788680:intron | 45.0% |
| GAGTCAGGTTAAAAGGGTAG+AGG | + | chr5_2:75935042-75935061 | None:intergenic | 45.0% | |
| GGAGGAGAGTCAGGTTAAAA+GGG | + | chr5_2:75935048-75935067 | None:intergenic | 45.0% | |
| TGGAGGAGAGTCAGGTTAAA+AGG | + | chr5_2:75935049-75935068 | None:intergenic | 45.0% | |
| AGATCAAATGGAGGAGAGTC+AGG | + | chr5_2:75935057-75935076 | None:intergenic | 45.0% | |
| CTTCTTACAACGGCATCTAC+GGG | - | chr5_2:75935080-75935099 | Msa0788680:intron | 45.0% | |
| ACACCATTAGAGAGAGAGTG+GGG | + | chr5_2:75935172-75935191 | None:intergenic | 45.0% | |
| GACACCATTAGAGAGAGAGT+GGG | + | chr5_2:75935173-75935192 | None:intergenic | 45.0% | |
| TGACACCATTAGAGAGAGAG+TGG | + | chr5_2:75935174-75935193 | None:intergenic | 45.0% | |
| CGAGAGTAAAGTAAGCGTAG+CGG | + | chr5_2:75935252-75935271 | None:intergenic | 45.0% | |
| CGCTTACTTTACTCTCGTGT+TGG | - | chr5_2:75935255-75935274 | Msa0788680:intron | 45.0% | |
| GGATTAGGGACTTTATCAGC+TGG | - | chr5_2:75935386-75935405 | Msa0788680:intron | 45.0% | |
| TTAGGGACTTTATCAGCTGG+AGG | - | chr5_2:75935389-75935408 | Msa0788680:intron | 45.0% | |
| ! | TGGAGGACTTGCTTTAGCAT+TGG | - | chr5_2:75935406-75935425 | Msa0788680:intron | 45.0% |
| ! | GGAGGACTTGCTTTAGCATT+GGG | - | chr5_2:75935407-75935426 | Msa0788680:intron | 45.0% |
| GGAATGCTGTCAAAATTGGC+TGG | - | chr5_2:75935428-75935447 | Msa0788680:intron | 45.0% | |
| ACAATTTCTTCCCACTGTCC+AGG | + | chr5_2:75935455-75935474 | None:intergenic | 45.0% | |
| GGCGTAGCAACATCATTAGA+AGG | - | chr5_2:75935836-75935855 | Msa0788680:intron | 45.0% | |
| ! | TTTTAGGCCTGTTTGGGTAC+TGG | - | chr5_2:75935907-75935926 | Msa0788680:intron | 45.0% |
| AAGCTATGCTGGTGAGCTTA+TGG | + | chr5_2:75936012-75936031 | None:intergenic | 45.0% | |
| ! | CTTCAGATTAAAGGCGTGTC+TGG | + | chr5_2:75936723-75936742 | None:intergenic | 45.0% |
| ! | ACGCCTTTAATCTGAAGCGT+CGG | - | chr5_2:75936726-75936745 | Msa0788680:intron | 45.0% |
| ! | GTACCGACGCTTCAGATTAA+AGG | + | chr5_2:75936732-75936751 | None:intergenic | 45.0% |
| GGGGGCAAAGGATAACAAAA+AGG | + | chr5_2:75936943-75936962 | None:intergenic | 45.0% | |
| !! | TGCGGGAGTCTTAGTCTTAA+TGG | - | chr5_2:75937008-75937027 | Msa0788680:intron | 45.0% |
| ! | CCCCTATTTTCTGCAATCTG+TGG | + | chr5_2:75937186-75937205 | None:intergenic | 45.0% |
| GCTATGCTGCAGTCACTATT+TGG | - | chr5_2:75937220-75937239 | Msa0788680:intron | 45.0% | |
| AAAACTTGTCTCTTCTCCGC+TGG | + | chr5_2:75937510-75937529 | None:intergenic | 45.0% | |
| GCGTAGAACTTTAGTCGCTT+CGG | + | chr5_2:75937559-75937578 | None:intergenic | 45.0% | |
| AATGCAGAGCTGTGGGAAAT+AGG | - | chr5_2:75937699-75937718 | Msa0788680:CDS | 45.0% | |
| AGCTGTGGGAAATAGGTAAC+AGG | - | chr5_2:75937706-75937725 | Msa0788680:CDS | 45.0% | |
| TCGTCGGTAACAACATTAGC+AGG | + | chr5_2:75937891-75937910 | None:intergenic | 45.0% | |
| !! | AATATTATATAATATATGTA+GGG | - | chr5_2:75933116-75933135 | Msa0788680:intron | 5.0% |
| !!! | ATACTTTTTAAATTATTAAT+CGG | + | chr5_2:75933233-75933252 | None:intergenic | 5.0% |
| !!! | ATTTTTTTTATATAAAAAAG+TGG | - | chr5_2:75933903-75933922 | Msa0788680:CDS | 5.0% |
| !!! | TTTTTTTTATATAAAAAAGT+GGG | - | chr5_2:75933904-75933923 | Msa0788680:CDS | 5.0% |
| !! | TTATTTATTTATTTATTTAC+TGG | + | chr5_2:75934155-75934174 | None:intergenic | 5.0% |
| ATGGTGAGCACGACTAAACG+AGG | - | chr5_2:75932193-75932212 | Msa0788680:three_prime_UTR | 50.0% | |
| ! | TTCTCACAGGGTACCCAAAC+TGG | - | chr5_2:75932404-75932423 | Msa0788680:CDS | 50.0% |
| ! | TCTCACAGGGTACCCAAACT+GGG | - | chr5_2:75932405-75932424 | Msa0788680:CDS | 50.0% |
| TGACGGAAGGAACCCAGTTT+GGG | + | chr5_2:75932420-75932439 | None:intergenic | 50.0% | |
| ! | ATGTCAATGAAAGGTGGCGG+TGG | - | chr5_2:75932468-75932487 | Msa0788680:CDS | 50.0% |
| GGCGGTGGGTATTCACAAAT+CGG | - | chr5_2:75932489-75932508 | Msa0788680:CDS | 50.0% | |
| TCATCATCGTCGTCGGATTC+CGG | + | chr5_2:75932525-75932544 | None:intergenic | 50.0% | |
| GAAACGAAAACCACCGTCGT+TGG | + | chr5_2:75932557-75932576 | None:intergenic | 50.0% | |
| TCAGATGGGATCGTGGAGTT+TGG | - | chr5_2:75932585-75932604 | Msa0788680:CDS | 50.0% | |
| AGATGGGTGTGTCTGATCCA+AGG | - | chr5_2:75932642-75932661 | Msa0788680:CDS | 50.0% | |
| ! | TGTCTGTTACGGTGTCAGAC+CGG | + | chr5_2:75932875-75932894 | None:intergenic | 50.0% |
| ! | GCGAGTTTAGCTCAGTTCGT+AGG | - | chr5_2:75933093-75933112 | Msa0788680:intron | 50.0% |
| GTATCAAACCTGGGTCACCA+TGG | + | chr5_2:75934326-75934345 | None:intergenic | 50.0% | |
| ! | TCAAGCCTTATCCCACTAGG+TGG | - | chr5_2:75934900-75934919 | Msa0788680:intron | 50.0% |
| ! | CAAGCCTTATCCCACTAGGT+GGG | - | chr5_2:75934901-75934920 | Msa0788680:intron | 50.0% |
| ! | AAGCCTTATCCCACTAGGTG+GGG | - | chr5_2:75934902-75934921 | Msa0788680:intron | 50.0% |
| TACCCCCACTCTCTCTCTAA+TGG | - | chr5_2:75935166-75935185 | Msa0788680:intron | 50.0% | |
| CACCATTAGAGAGAGAGTGG+GGG | + | chr5_2:75935171-75935190 | None:intergenic | 50.0% | |
| AGGATGTTGCGTTGGATGAG+TGG | + | chr5_2:75935224-75935243 | None:intergenic | 50.0% | |
| ! | AAGTAAGCGTAGCGGAGATG+AGG | + | chr5_2:75935244-75935263 | None:intergenic | 50.0% |
| !! | TCTCGTGTTGGCTCTCCATT+GGG | - | chr5_2:75935267-75935286 | Msa0788680:intron | 50.0% |
| GCAGGAGCAACTCTTAGCAA+AGG | - | chr5_2:75935353-75935372 | Msa0788680:intron | 50.0% | |
| CTGTCAAAATTGGCTGGACC+TGG | - | chr5_2:75935434-75935453 | Msa0788680:intron | 50.0% | |
| !! | CTTGGTGCTGCTGTATCTGT+TGG | - | chr5_2:75935743-75935762 | Msa0788680:intron | 50.0% |
| AGATCTTCACCGGCCCATAT+TGG | + | chr5_2:75935788-75935807 | None:intergenic | 50.0% | |
| GTTTGTGCCAGTACCCAAAC+AGG | + | chr5_2:75935917-75935936 | None:intergenic | 50.0% | |
| GGCTAGGCTACAAAACCTTG+TGG | - | chr5_2:75938055-75938074 | Msa0788680:five_prime_UTR | 50.0% | |
| ! | GTGACGGAAGGAACCCAGTT+TGG | + | chr5_2:75932421-75932440 | None:intergenic | 55.0% |
| ! | TCAATGAAAGGTGGCGGTGG+CGG | - | chr5_2:75932471-75932490 | Msa0788680:CDS | 55.0% |
| CGTCGTCGGATTCCGGTAAA+GGG | + | chr5_2:75932518-75932537 | None:intergenic | 55.0% | |
| TCGTCGTCGGATTCCGGTAA+AGG | + | chr5_2:75932519-75932538 | None:intergenic | 55.0% | |
| ACTACATTCGCCAACGACGG+TGG | - | chr5_2:75932544-75932563 | Msa0788680:CDS | 55.0% | |
| ! | CGACGGTGGTTTTCGTTTCG+AGG | - | chr5_2:75932558-75932577 | Msa0788680:CDS | 55.0% |
| CTCTTCAACCATGGTGACCC+AGG | - | chr5_2:75934315-75934334 | Msa0788680:intron | 55.0% | |
| CTTATCCCACTAGGTGGGGT+CGG | - | chr5_2:75934906-75934925 | Msa0788680:intron | 55.0% | |
| CGGAGATGAGGATGTTGCGT+TGG | + | chr5_2:75935232-75935251 | None:intergenic | 55.0% | |
| !! | CTCTCGTGTTGGCTCTCCAT+TGG | - | chr5_2:75935266-75935285 | Msa0788680:intron | 55.0% |
| AATTGGCTGGACCTGGACAG+TGG | - | chr5_2:75935441-75935460 | Msa0788680:intron | 55.0% | |
| ATTGGCTGGACCTGGACAGT+GGG | - | chr5_2:75935442-75935461 | Msa0788680:intron | 55.0% | |
| ! | AACGTGTGGCGGGGAAAGCA+TGG | - | chr5_2:75932618-75932637 | Msa0788680:CDS | 60.0% |
| ! | ACGTGTGGCGGGGAAAGCAT+GGG | - | chr5_2:75932619-75932638 | Msa0788680:CDS | 60.0% |
| ! | GCGGGGAAAGCATGGGAGAT+GGG | - | chr5_2:75932626-75932645 | Msa0788680:CDS | 60.0% |
| CGACCCCACCTAGTGGGATA+AGG | + | chr5_2:75934908-75934927 | None:intergenic | 60.0% | |
| TGTAGCCGACCCCACCTAGT+GGG | + | chr5_2:75934914-75934933 | None:intergenic | 60.0% | |
| ATGTAGCCGACCCCACCTAG+TGG | + | chr5_2:75934915-75934934 | None:intergenic | 60.0% | |
| ACTAGGTGGGGTCGGCTACA+TGG | - | chr5_2:75934914-75934933 | Msa0788680:CDS | 60.0% | |
| GCTATCTGGGAGCCACCTCA+TGG | - | chr5_2:75936479-75936498 | Msa0788680:intron | 60.0% | |
| ! | ATGAAAGGTGGCGGTGGCGG+TGG | - | chr5_2:75932474-75932493 | Msa0788680:CDS | 65.0% |
| ! | TGAAAGGTGGCGGTGGCGGT+GGG | - | chr5_2:75932475-75932494 | Msa0788680:CDS | 65.0% |
| ! | GGCGGGGAAAGCATGGGAGA+TGG | - | chr5_2:75932625-75932644 | Msa0788680:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 75932108 | 75938304 | 75932108 | ID=Msa0788680;Name=Msa0788680 |
| chr5_2 | mRNA | 75932108 | 75938304 | 75932108 | ID=Msa0788680-mRNA-1;Parent=Msa0788680;Name=Msa0788680-mRNA-1;_AED=0.03;_eAED=0.03;_QI=536|1|1|1|1|1|6|114|515 |
| chr5_2 | exon | 75932108 | 75932908 | 75932108 | ID=Msa0788680-mRNA-1:exon:23088;Parent=Msa0788680-mRNA-1 |
| chr5_2 | exon | 75933796 | 75933942 | 75933796 | ID=Msa0788680-mRNA-1:exon:23087;Parent=Msa0788680-mRNA-1 |
| chr5_2 | exon | 75934043 | 75934179 | 75934043 | ID=Msa0788680-mRNA-1:exon:23086;Parent=Msa0788680-mRNA-1 |
| chr5_2 | exon | 75934555 | 75934824 | 75934555 | ID=Msa0788680-mRNA-1:exon:23085;Parent=Msa0788680-mRNA-1 |
| chr5_2 | exon | 75934912 | 75935055 | 75934912 | ID=Msa0788680-mRNA-1:exon:23084;Parent=Msa0788680-mRNA-1 |
| chr5_2 | exon | 75937606 | 75938304 | 75937606 | ID=Msa0788680-mRNA-1:exon:23083;Parent=Msa0788680-mRNA-1 |
| chr5_2 | five_prime_UTR | 75937769 | 75938304 | 75937769 | ID=Msa0788680-mRNA-1:five_prime_utr;Parent=Msa0788680-mRNA-1 |
| chr5_2 | CDS | 75937606 | 75937768 | 75937606 | ID=Msa0788680-mRNA-1:cds;Parent=Msa0788680-mRNA-1 |
| chr5_2 | CDS | 75934912 | 75935055 | 75934912 | ID=Msa0788680-mRNA-1:cds;Parent=Msa0788680-mRNA-1 |
| chr5_2 | CDS | 75934555 | 75934824 | 75934555 | ID=Msa0788680-mRNA-1:cds;Parent=Msa0788680-mRNA-1 |
| chr5_2 | CDS | 75934043 | 75934179 | 75934043 | ID=Msa0788680-mRNA-1:cds;Parent=Msa0788680-mRNA-1 |
| chr5_2 | CDS | 75933796 | 75933942 | 75933796 | ID=Msa0788680-mRNA-1:cds;Parent=Msa0788680-mRNA-1 |
| chr5_2 | CDS | 75932222 | 75932908 | 75932222 | ID=Msa0788680-mRNA-1:cds;Parent=Msa0788680-mRNA-1 |
| chr5_2 | three_prime_UTR | 75932108 | 75932221 | 75932108 | ID=Msa0788680-mRNA-1:three_prime_utr;Parent=Msa0788680-mRNA-1 |
| Gene Sequence |
| Protein sequence |
