Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0927990 | XP_013453021.1 | 97.496 | 599 | 15 | 0 | 1 | 599 | 1 | 599 | 0.0 | 1208 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0927990 | sp|Q9LS46|ALMT9_ARATH | 60.637 | 597 | 192 | 10 | 10 | 587 | 4 | 576 | 0.0 | 691 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0020390 | Msa0927990 | 0.810508 | 1.113413e-50 | -8.615850e-47 |
| Msa0029260 | Msa0927990 | 0.800958 | 1.129088e-48 | -8.615850e-47 |
| Msa0033880 | Msa0927990 | 0.808420 | 3.123842e-50 | -8.615850e-47 |
| Msa0065950 | Msa0927990 | 0.810472 | 1.133610e-50 | -8.615850e-47 |
| Msa0081650 | Msa0927990 | 0.804395 | 2.205598e-49 | -8.615850e-47 |
| Msa0092170 | Msa0927990 | 0.804329 | 2.275666e-49 | -8.615850e-47 |
| Msa0096980 | Msa0927990 | 0.802292 | 6.012539e-49 | -8.615850e-47 |
| Msa0115390 | Msa0927990 | 0.807388 | 5.178641e-50 | -8.615850e-47 |
| Msa0631350 | Msa0927990 | 0.808179 | 3.516888e-50 | -8.615850e-47 |
| Msa0643320 | Msa0927990 | 0.823378 | 1.430228e-53 | -8.615850e-47 |
| Msa0669720 | Msa0927990 | 0.818796 | 1.625447e-52 | -8.615850e-47 |
| Msa0669760 | Msa0927990 | 0.808086 | 3.681631e-50 | -8.615850e-47 |
| Msa0683140 | Msa0927990 | 0.810506 | 1.114601e-50 | -8.615850e-47 |
| Msa0683600 | Msa0927990 | 0.817852 | 2.659834e-52 | -8.615850e-47 |
| Msa0721280 | Msa0927990 | 0.812545 | 4.016392e-51 | -8.615850e-47 |
| Msa0748920 | Msa0927990 | 0.805631 | 1.216219e-49 | -8.615850e-47 |
| Msa0788680 | Msa0927990 | 0.857122 | 2.023084e-62 | -8.615850e-47 |
| Msa0790610 | Msa0927990 | 0.813023 | 3.156728e-51 | -8.615850e-47 |
| Msa0795030 | Msa0927990 | 0.800205 | 1.607342e-48 | -8.615850e-47 |
| Msa0798290 | Msa0927990 | 0.800805 | 1.212972e-48 | -8.615850e-47 |
| Msa0807610 | Msa0927990 | 0.827788 | 1.289505e-54 | -8.615850e-47 |
| Msa0830990 | Msa0927990 | 0.800217 | 1.598584e-48 | -8.615850e-47 |
| Msa0127040 | Msa0927990 | 0.817670 | 2.923637e-52 | -8.615850e-47 |
| Msa0127850 | Msa0927990 | 0.809579 | 1.765147e-50 | -8.615850e-47 |
| Msa0128860 | Msa0927990 | 0.807513 | 4.873557e-50 | -8.615850e-47 |
| Msa0145010 | Msa0927990 | 0.803616 | 3.202445e-49 | -8.615850e-47 |
| Msa0167480 | Msa0927990 | 0.803812 | 2.915464e-49 | -8.615850e-47 |
| Msa0174000 | Msa0927990 | 0.806109 | 9.647442e-50 | -8.615850e-47 |
| Msa0174730 | Msa0927990 | 0.806785 | 6.948900e-50 | -8.615850e-47 |
| Msa0188350 | Msa0927990 | 0.812574 | 3.959437e-51 | -8.615850e-47 |
| Msa0188890 | Msa0927990 | 0.807215 | 5.637059e-50 | -8.615850e-47 |
| Msa0189520 | Msa0927990 | 0.805590 | 1.240192e-49 | -8.615850e-47 |
| Msa0231100 | Msa0927990 | 0.819190 | 1.322698e-52 | -8.615850e-47 |
| Msa0231380 | Msa0927990 | 0.813513 | 2.464092e-51 | -8.615850e-47 |
| Msa0233370 | Msa0927990 | 0.804796 | 1.819020e-49 | -8.615850e-47 |
| Msa0233380 | Msa0927990 | 0.811134 | 8.150942e-51 | -8.615850e-47 |
| Msa0401560 | Msa0927990 | 0.803479 | 3.419166e-49 | -8.615850e-47 |
| Msa0402820 | Msa0927990 | 0.816857 | 4.454118e-52 | -8.615850e-47 |
| Msa0453680 | Msa0927990 | 0.807678 | 4.495085e-50 | -8.615850e-47 |
| Msa0469620 | Msa0927990 | -0.801541 | 8.575475e-49 | -8.615850e-47 |
| Msa0244980 | Msa0927990 | 0.812310 | 4.520677e-51 | -8.615850e-47 |
| Msa0249580 | Msa0927990 | 0.801253 | 9.825321e-49 | -8.615850e-47 |
| Msa0270660 | Msa0927990 | 0.813134 | 2.984888e-51 | -8.615850e-47 |
| Msa0271360 | Msa0927990 | 0.829724 | 4.385349e-55 | -8.615850e-47 |
| Msa0275360 | Msa0927990 | 0.811974 | 5.352869e-51 | -8.615850e-47 |
| Msa0283420 | Msa0927990 | 0.817412 | 3.341694e-52 | -8.615850e-47 |
| Msa0296980 | Msa0927990 | -0.800846 | 1.189855e-48 | -8.615850e-47 |
| Msa0309880 | Msa0927990 | 0.809982 | 1.445652e-50 | -8.615850e-47 |
| Msa0321690 | Msa0927990 | 0.804698 | 1.906423e-49 | -8.615850e-47 |
| Msa0322900 | Msa0927990 | 0.820405 | 6.980207e-53 | -8.615850e-47 |
| Msa0485680 | Msa0927990 | 0.804072 | 2.574711e-49 | -8.615850e-47 |
| Msa0517090 | Msa0927990 | 0.800955 | 1.130471e-48 | -8.615850e-47 |
| Msa0524590 | Msa0927990 | 0.802396 | 5.721646e-49 | -8.615850e-47 |
| Msa0531250 | Msa0927990 | 0.800406 | 1.463053e-48 | -8.615850e-47 |
| Msa0534900 | Msa0927990 | 0.804308 | 2.298637e-49 | -8.615850e-47 |
| Msa0602370 | Msa0927990 | 0.803088 | 4.119066e-49 | -8.615850e-47 |
| Msa0879850 | Msa0927990 | 0.810933 | 9.008435e-51 | -8.615850e-47 |
| Msa0897200 | Msa0927990 | 0.802581 | 5.242794e-49 | -8.615850e-47 |
| Msa0901110 | Msa0927990 | 0.801415 | 9.102470e-49 | -8.615850e-47 |
| Msa0923780 | Msa0927990 | 0.813857 | 2.069509e-51 | -8.615850e-47 |
| Msa0927990 | Msa0962840 | 0.804889 | 1.739526e-49 | -8.615850e-47 |
| Msa0927990 | Msa0964440 | 0.854339 | 1.314767e-61 | -8.615850e-47 |
| Msa0927990 | Msa1006840 | 0.803704 | 3.070407e-49 | -8.615850e-47 |
| Msa0927990 | Msa1027250 | 0.822103 | 2.832830e-53 | -8.615850e-47 |
| Msa0927990 | Msa1027300 | 0.825713 | 4.034703e-54 | -8.615850e-47 |
| Msa0927990 | Msa1027360 | 0.823197 | 1.576757e-53 | -8.615850e-47 |
| Msa0927990 | Msa1122780 | 0.805500 | 1.295244e-49 | -8.615850e-47 |
| Msa0927990 | Msa1125790 | -0.809970 | 1.453942e-50 | -8.615850e-47 |
| Msa0927990 | Msa1206290 | 0.802881 | 4.545892e-49 | -8.615850e-47 |
| Msa0927990 | Msa1220870 | 0.803742 | 3.015437e-49 | -8.615850e-47 |
| Msa0927990 | Msa1254730 | 0.813511 | 2.466917e-51 | -8.615850e-47 |
| Msa0927990 | Msa1345220 | 0.821548 | 3.807726e-53 | -8.615850e-47 |
| Msa0927990 | Msa1351540 | 0.822395 | 2.423850e-53 | -8.615850e-47 |
| Msa0927990 | Msa1357890 | 0.815246 | 1.019744e-51 | -8.615850e-47 |
| Msa0927990 | Msa1379760 | 0.804319 | 2.287021e-49 | -8.615850e-47 |
| Msa0927990 | Msa1393800 | 0.802077 | 6.658270e-49 | -8.615850e-47 |
| Msa0927990 | Msa1398090 | 0.813155 | 2.954032e-51 | -8.615850e-47 |
| Msa0927990 | Msa1460320 | -0.822535 | 2.248725e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0927990 | MtrunA17_Chr6g0484691 | 97.496 | 599 | 15 | 0 | 1 | 599 | 1 | 599 | 0.0 | 1208 |
| Msa0927990 | MtrunA17_Chr8g0390921 | 68.174 | 597 | 160 | 7 | 7 | 597 | 4 | 576 | 0.0 | 795 |
| Msa0927990 | MtrunA17_Chr8g0390931 | 64.576 | 590 | 166 | 10 | 20 | 599 | 12 | 568 | 0.0 | 725 |
| Msa0927990 | MtrunA17_Chr8g0390901 | 73.662 | 467 | 107 | 7 | 139 | 597 | 10 | 468 | 0.0 | 696 |
| Msa0927990 | MtrunA17_Chr1g0210101 | 54.625 | 573 | 223 | 10 | 10 | 580 | 49 | 586 | 0.0 | 597 |
| Msa0927990 | MtrunA17_Chr1g0212251 | 31.862 | 521 | 317 | 11 | 58 | 576 | 14 | 498 | 1.26e-81 | 266 |
| Msa0927990 | MtrunA17_Chr4g0054741 | 34.442 | 511 | 293 | 11 | 71 | 576 | 32 | 505 | 1.62e-79 | 260 |
| Msa0927990 | MtrunA17_Chr1g0188871 | 36.842 | 361 | 213 | 5 | 68 | 426 | 30 | 377 | 3.75e-79 | 258 |
| Msa0927990 | MtrunA17_Chr1g0212291 | 33.270 | 526 | 309 | 12 | 58 | 576 | 15 | 505 | 1.52e-78 | 258 |
| Msa0927990 | MtrunA17_Chr1g0212201 | 31.226 | 522 | 321 | 12 | 58 | 576 | 18 | 504 | 1.61e-77 | 255 |
| Msa0927990 | MtrunA17_Chr1g0188881 | 35.433 | 381 | 229 | 6 | 48 | 426 | 19 | 384 | 2.50e-72 | 240 |
| Msa0927990 | MtrunA17_Chr2g0321971 | 37.463 | 339 | 198 | 5 | 70 | 405 | 23 | 350 | 3.53e-69 | 231 |
| Msa0927990 | MtrunA17_Chr2g0321961 | 35.632 | 348 | 207 | 7 | 64 | 407 | 17 | 351 | 4.26e-62 | 212 |
| Msa0927990 | MtrunA17_Chr4g0025591 | 31.233 | 365 | 237 | 5 | 44 | 407 | 4 | 355 | 5.26e-61 | 209 |
| Msa0927990 | MtrunA17_Chr7g0259731 | 34.503 | 342 | 205 | 8 | 89 | 424 | 61 | 389 | 1.50e-60 | 207 |
| Msa0927990 | MtrunA17_Chr7g0267471 | 34.977 | 426 | 245 | 10 | 84 | 500 | 42 | 444 | 1.82e-60 | 208 |
| Msa0927990 | MtrunA17_Chr5g0400471 | 30.769 | 481 | 262 | 13 | 140 | 586 | 3 | 446 | 2.43e-55 | 194 |
| Msa0927990 | MtrunA17_Chr4g0054771 | 29.771 | 393 | 235 | 9 | 187 | 576 | 3 | 357 | 1.60e-49 | 176 |
| Msa0927990 | MtrunA17_Chr8g0390911 | 55.970 | 134 | 41 | 3 | 7 | 139 | 4 | 120 | 3.31e-37 | 134 |
| Msa0927990 | MtrunA17_Chr6g0454771 | 70.238 | 84 | 23 | 1 | 139 | 222 | 39 | 120 | 1.42e-32 | 122 |
| Msa0927990 | MtrunA17_Chr1g0189041 | 68.966 | 58 | 16 | 1 | 162 | 219 | 1 | 56 | 1.22e-21 | 89.0 |
| Msa0927990 | MtrunA17_Chr5g0400481 | 40.260 | 77 | 42 | 1 | 71 | 143 | 40 | 116 | 9.26e-12 | 62.4 |
| Msa0927990 | MtrunA17_Chr4g0054761 | 51.515 | 66 | 32 | 0 | 83 | 148 | 48 | 113 | 2.64e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0927990 | AT3G18440.1 | 60.637 | 597 | 192 | 10 | 10 | 587 | 4 | 576 | 0.0 | 691 |
| Msa0927990 | AT1G18420.1 | 56.752 | 585 | 207 | 13 | 12 | 580 | 27 | 581 | 0.0 | 620 |
| Msa0927990 | AT1G18420.2 | 59.961 | 512 | 175 | 9 | 85 | 580 | 1 | 498 | 0.0 | 597 |
| Msa0927990 | AT1G25480.1 | 53.415 | 571 | 233 | 9 | 20 | 583 | 4 | 548 | 0.0 | 560 |
| Msa0927990 | AT1G68600.1 | 55.361 | 513 | 210 | 6 | 72 | 580 | 36 | 533 | 0.0 | 538 |
| Msa0927990 | AT2G17470.2 | 54.159 | 517 | 206 | 7 | 84 | 591 | 53 | 547 | 0.0 | 530 |
| Msa0927990 | AT2G17470.1 | 54.159 | 517 | 206 | 7 | 84 | 591 | 31 | 525 | 0.0 | 529 |
| Msa0927990 | AT5G46610.1 | 32.381 | 525 | 324 | 9 | 60 | 576 | 17 | 518 | 3.08e-87 | 281 |
| Msa0927990 | AT4G17970.1 | 30.798 | 539 | 314 | 7 | 68 | 576 | 23 | 532 | 2.65e-86 | 279 |
| Msa0927990 | AT5G46600.1 | 31.204 | 548 | 347 | 13 | 35 | 576 | 2 | 525 | 1.70e-78 | 258 |
| Msa0927990 | AT4G00910.1 | 37.119 | 361 | 211 | 7 | 75 | 428 | 46 | 397 | 4.46e-75 | 248 |
| Msa0927990 | AT5G46610.2 | 29.333 | 525 | 316 | 10 | 60 | 576 | 17 | 494 | 3.79e-70 | 236 |
| Msa0927990 | AT1G08430.1 | 33.913 | 345 | 217 | 7 | 73 | 413 | 2 | 339 | 5.04e-69 | 232 |
| Msa0927990 | AT1G08440.1 | 34.639 | 332 | 209 | 5 | 75 | 405 | 4 | 328 | 3.18e-67 | 227 |
| Msa0927990 | AT5G46610.3 | 28.381 | 525 | 298 | 10 | 60 | 576 | 17 | 471 | 2.30e-65 | 222 |
| Msa0927990 | AT3G11680.2 | 37.609 | 343 | 194 | 6 | 64 | 405 | 25 | 348 | 9.77e-65 | 220 |
| Msa0927990 | AT3G11680.1 | 37.609 | 343 | 194 | 6 | 64 | 405 | 23 | 346 | 1.09e-64 | 220 |
| Msa0927990 | AT2G27240.2 | 34.663 | 326 | 205 | 5 | 89 | 413 | 18 | 336 | 1.76e-63 | 217 |
| Msa0927990 | AT2G27240.1 | 33.429 | 350 | 203 | 7 | 89 | 413 | 18 | 362 | 1.21e-60 | 210 |
Find 136 sgRNAs with CRISPR-Local
Find 352 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTCACAGGGTACCCAAAT+TGG | 0.162014 | 6_2:-72726044 | Msa0927990:CDS |
| CGTGCTCACCATTATATTAT+TGG | 0.169950 | 6_2:+72726268 | None:intergenic |
| GTTTAATTGTTTCAAATCTA+AGG | 0.221413 | 6_2:-72720704 | Msa0927990:CDS |
| ACTCAGGCATTGTGCATTTA+TGG | 0.225741 | 6_2:-72722312 | Msa0927990:CDS |
| ACAATGAAGGCTTATGAATA+TGG | 0.228453 | 6_2:-72723246 | Msa0927990:CDS |
| TATTGTTACGTTATTGTATC+TGG | 0.230169 | 6_2:-72723201 | Msa0927990:CDS |
| TGAGAAACATTCTCGTTTCT+TGG | 0.242314 | 6_2:+72721138 | None:intergenic |
| GTGACGGAAGGAACCCAATT+TGG | 0.242848 | 6_2:+72726030 | None:intergenic |
| AGGTGAGAAAGCAAAGTTTA+AGG | 0.271199 | 6_2:-72720773 | Msa0927990:CDS |
| AAAGGTCTAAACAGAGGATT+AGG | 0.284845 | 6_2:-72723495 | Msa0927990:CDS |
| ATGTGTGCATATATCCAATA+TGG | 0.288826 | 6_2:-72723095 | Msa0927990:CDS |
| CAGATGGGATCGTTGAGTTT+TGG | 0.295121 | 6_2:-72725862 | Msa0927990:CDS |
| GGATGAAGAAAGACATTTCT+TGG | 0.297160 | 6_2:-72721100 | Msa0927990:CDS |
| AATGCAGAGCTGTGGGAAAT+AGG | 0.303810 | 6_2:-72721168 | Msa0927990:CDS |
| TCATCATCGTCGTCGGATTC+CGG | 0.332728 | 6_2:+72725926 | None:intergenic |
| ATGAAAGGTGGCGGTGGCGG+TGG | 0.333630 | 6_2:-72725974 | Msa0927990:CDS |
| TTACCGACGAAAACATGTTT+AGG | 0.343971 | 6_2:-72720966 | Msa0927990:CDS |
| ACAAATCGGCATCCCTTTAC+CGG | 0.358676 | 6_2:-72725945 | Msa0927990:CDS |
| ATTGGGAATGCTGTCAAAAT+TGG | 0.369611 | 6_2:-72723442 | Msa0927990:CDS |
| AGATCTTCACCGGCCCATAT+TGG | 0.373138 | 6_2:+72723081 | None:intergenic |
| TAATGAACTAGCACTTTCAT+AGG | 0.375230 | 6_2:+72720873 | None:intergenic |
| ATGGTTAGCATCTTCATTGT+AGG | 0.378298 | 6_2:-72723387 | Msa0927990:intron |
| TGTTGGGAAGTACTCTGTTT+GGG | 0.380632 | 6_2:-72725702 | Msa0927990:CDS |
| AGCAGGTTTAATGATGTTAT+CGG | 0.382986 | 6_2:+72720996 | None:intergenic |
| TATTCATAAGCCTTCATTGT+TGG | 0.386844 | 6_2:+72723249 | None:intergenic |
| TTTCTTCATCCATTTGTAAG+AGG | 0.389222 | 6_2:+72721112 | None:intergenic |
| GGAGGACTTGCTTTAGCATT+GGG | 0.398305 | 6_2:-72723459 | Msa0927990:CDS |
| ATTACTCACCAATAATATAA+TGG | 0.404454 | 6_2:-72726276 | Msa0927990:five_prime_UTR |
| TTCCTGTGATGTTATTAGTT+CGG | 0.413745 | 6_2:+72726339 | None:intergenic |
| ATGTTGGGAAGTACTCTGTT+TGG | 0.413939 | 6_2:-72725703 | Msa0927990:CDS |
| TTACCTTCTTAAGCTCTTTG+CGG | 0.417975 | 6_2:+72721337 | None:intergenic |
| TCGTCGTCGGATTCCGGTAA+AGG | 0.418624 | 6_2:+72725932 | None:intergenic |
| GCTGAAAACACAAACTTCCT+TGG | 0.420798 | 6_2:+72725788 | None:intergenic |
| TCTCACAGGGTACCCAAATT+GGG | 0.427310 | 6_2:-72726043 | Msa0927990:CDS |
| TGACGGAAGGAACCCAATTT+GGG | 0.431746 | 6_2:+72726031 | None:intergenic |
| AACAACCGTTTCCGGATGTT+GGG | 0.441325 | 6_2:-72725718 | Msa0927990:CDS |
| TTCTCAAGACCTCTTACAAA+TGG | 0.444082 | 6_2:-72721121 | Msa0927990:CDS |
| CTGTCAAAATTGGCTGGACC+TGG | 0.444488 | 6_2:-72723432 | Msa0927990:CDS |
| AGATACAATAACGTAACAAT+AGG | 0.444661 | 6_2:+72723203 | None:intergenic |
| AGCTGTGGGAAATAGGTAAC+AGG | 0.447700 | 6_2:-72721161 | Msa0927990:CDS |
| CAACAAGAACTTGTAACATC+TGG | 0.450503 | 6_2:-72720739 | Msa0927990:CDS |
| AAACAACCGTTTCCGGATGT+TGG | 0.451682 | 6_2:-72725719 | Msa0927990:CDS |
| GGGGTTTGTTTGAAGATTGT+GGG | 0.451809 | 6_2:+72726140 | None:intergenic |
| AGGGGTTTGTTTGAAGATTG+TGG | 0.454993 | 6_2:+72726139 | None:intergenic |
| TAGAAAGAAAGTTGATCTAC+TGG | 0.457831 | 6_2:+72726216 | None:intergenic |
| GCAGGTTTAATGATGTTATC+GGG | 0.463058 | 6_2:+72720997 | None:intergenic |
| ACAATTTCTTCCCACTGTCC+AGG | 0.463381 | 6_2:+72723414 | None:intergenic |
| AAGAATTTGAAACGTGTGGC+GGG | 0.464080 | 6_2:-72725839 | Msa0927990:CDS |
| TGGAGGACTTGCTTTAGCAT+TGG | 0.464724 | 6_2:-72723460 | Msa0927990:CDS |
| ATGTATACTTTCTGAAATAC+AGG | 0.465569 | 6_2:-72722273 | Msa0927990:intron |
| GGCGGGGAAAGCATGGGAGA+TGG | 0.469847 | 6_2:-72725822 | Msa0927990:CDS |
| GTGGGAAGAAATTGTAATCA+TGG | 0.470172 | 6_2:-72723406 | Msa0927990:CDS |
| TATCGTATTCAACACAGTTA+AGG | 0.478209 | 6_2:+72722619 | None:intergenic |
| GCGTAGAACTTTAGTCGCTT+CGG | 0.478291 | 6_2:+72721311 | None:intergenic |
| TGTGATGTTATTAGTTCGGC+TGG | 0.478782 | 6_2:+72726343 | None:intergenic |
| TCGTCGGTAACAACATTAGC+AGG | 0.490901 | 6_2:+72720979 | None:intergenic |
| GCGGGGAAAGCATGGGAGAT+GGG | 0.493929 | 6_2:-72725821 | Msa0927990:CDS |
| GGCGGTGGGTATTCACAAAT+CGG | 0.497636 | 6_2:-72725959 | Msa0927990:CDS |
| AAAACTTGTCTCTTCTCCGC+TGG | 0.500088 | 6_2:+72721360 | None:intergenic |
| AGAAGATGCACCAACAAAAG+TGG | 0.500956 | 6_2:-72720908 | Msa0927990:CDS |
| AACGTGTGGCGGGGAAAGCA+TGG | 0.504246 | 6_2:-72725829 | Msa0927990:CDS |
| TCAATGAAAGGTGGCGGTGG+CGG | 0.508318 | 6_2:-72725977 | Msa0927990:CDS |
| ACAGAGTACTTCCCAACATC+CGG | 0.511401 | 6_2:+72725707 | None:intergenic |
| TTTCCGCAAAGAGCTTAAGA+AGG | 0.514375 | 6_2:-72721340 | Msa0927990:CDS |
| ATTGTATCTGGATATCGAAC+CGG | 0.516050 | 6_2:-72723189 | Msa0927990:CDS |
| TGAAAGGTGGCGGTGGCGGT+GGG | 0.518253 | 6_2:-72725973 | Msa0927990:CDS |
| CTAATAACATCACAGGAAAA+CGG | 0.518493 | 6_2:-72726334 | Msa0927990:five_prime_UTR |
| CTTGGTGCTGCTGTATCTGT+TGG | 0.524842 | 6_2:-72723123 | Msa0927990:CDS |
| CCATGATGCAATCTTCTCAC+AGG | 0.526047 | 6_2:-72726057 | Msa0927990:CDS |
| TTTGTGTTGTAACTTGAAAG+TGG | 0.527242 | 6_2:+72726186 | None:intergenic |
| TACTTCCCAACATCCGGAAA+CGG | 0.527916 | 6_2:+72725713 | None:intergenic |
| TTGTAACATCTGGTTGGACT+AGG | 0.528986 | 6_2:-72720729 | Msa0927990:CDS |
| TGCTGTATGAAGAAAGTCTC+CGG | 0.530779 | 6_2:+72723170 | None:intergenic |
| GCATTGTGCATTTATGGTCA+TGG | 0.531427 | 6_2:-72722306 | Msa0927990:CDS |
| GGATTAGGGACTTTATCAGC+TGG | 0.536839 | 6_2:-72723480 | Msa0927990:CDS |
| GCTATTTGGGAGCCACCTCA+TGG | 0.538100 | 6_2:-72722389 | Msa0927990:CDS |
| ACAAAATGTTTAGATATCCA+TGG | 0.538110 | 6_2:-72722361 | Msa0927990:CDS |
| ATACTTTGTAACATGTGTCA+TGG | 0.538847 | 6_2:-72720665 | Msa0927990:three_prime_UTR |
| TTCAAGGAAACTGTGACGGA+AGG | 0.540338 | 6_2:+72726018 | None:intergenic |
| TGGTGAGTAATAGAAGACTT+TGG | 0.541942 | 6_2:+72726288 | None:intergenic |
| GGAATGCTGTCAAAATTGGC+TGG | 0.542934 | 6_2:-72723438 | Msa0927990:CDS |
| TTCTTGTAAATGCAGAGCTG+TGG | 0.543062 | 6_2:-72721176 | Msa0927990:CDS |
| CAAGTTCTTGTTGTTCAAGA+GGG | 0.543303 | 6_2:+72720749 | None:intergenic |
| GTCGTCTTTGAGTTCAGTAT+AGG | 0.545881 | 6_2:-72725662 | Msa0927990:intron |
| TACAAGCACAGAAGATGCAT+TGG | 0.549163 | 6_2:-72722520 | Msa0927990:intron |
| GTATCAAGCTTCTGATGATG+TGG | 0.550964 | 6_2:-72722574 | Msa0927990:CDS |
| TTGTGTTGTAACTTGAAAGT+GGG | 0.551479 | 6_2:+72726187 | None:intergenic |
| GGCGTAGCAACATCATTAGA+AGG | 0.551490 | 6_2:-72723030 | Msa0927990:intron |
| TGTGTGCATATATCCAATAT+GGG | 0.552034 | 6_2:-72723094 | Msa0927990:CDS |
| AAAACTATATCCAACAATGA+AGG | 0.561439 | 6_2:-72723259 | Msa0927990:CDS |
| AAGAACTTGTAACATCTGGT+TGG | 0.564340 | 6_2:-72720735 | Msa0927990:CDS |
| TTGGAAGAATTTGAAACGTG+TGG | 0.565439 | 6_2:-72725843 | Msa0927990:CDS |
| GGGTTTGTTTGAAGATTGTG+GGG | 0.566930 | 6_2:+72726141 | None:intergenic |
| TTAACTGTGTTGAATACGAT+AGG | 0.567618 | 6_2:-72722617 | Msa0927990:CDS |
| TTTACAAAAGCGGTGAGATG+TGG | 0.567894 | 6_2:+72720581 | None:intergenic |
| ACAAGTTCTTGTTGTTCAAG+AGG | 0.570038 | 6_2:+72720748 | None:intergenic |
| TCTTGTAAATGCAGAGCTGT+GGG | 0.571185 | 6_2:-72721175 | Msa0927990:CDS |
| ACTAAAGTTCTACGCGAACT+CGG | 0.571792 | 6_2:-72721303 | Msa0927990:CDS |
| AAGATTATGTAGATCTTCAC+CGG | 0.577973 | 6_2:+72723071 | None:intergenic |
| ACTACATTCGCCAACGACGG+TGG | 0.579632 | 6_2:-72725904 | Msa0927990:CDS |
| GAAACGAAAACCACCGTCGT+TGG | 0.585444 | 6_2:+72725894 | None:intergenic |
| CTCATGTCAATGAAAGGTGG+CGG | 0.587784 | 6_2:-72725983 | Msa0927990:CDS |
| ATGTCAATGAAAGGTGGCGG+TGG | 0.588834 | 6_2:-72725980 | Msa0927990:CDS |
| AGCCGAACTAATAACATCAC+AGG | 0.589755 | 6_2:-72726341 | Msa0927990:five_prime_UTR |
| AAGGTCTAAACAGAGGATTA+GGG | 0.590676 | 6_2:-72723494 | Msa0927990:CDS |
| ATTGGCTGGACCTGGACAGT+GGG | 0.592025 | 6_2:-72723424 | Msa0927990:CDS |
| ACGTGTGGCGGGGAAAGCAT+GGG | 0.593925 | 6_2:-72725828 | Msa0927990:CDS |
| AAGTTGATCTACTGGTCTGT+TGG | 0.594805 | 6_2:+72726224 | None:intergenic |
| AATGTAGTCATCATCGTCGT+CGG | 0.597630 | 6_2:+72725919 | None:intergenic |
| AGATGTGAAGACAAAGATGC+TGG | 0.600579 | 6_2:+72720940 | None:intergenic |
| GGTTTGTTTGAAGATTGTGG+GGG | 0.602599 | 6_2:+72726142 | None:intergenic |
| CTACTGGTCTGTTGGTAATG+CGG | 0.607189 | 6_2:+72726232 | None:intergenic |
| GTTTGTTTGAAGATTGTGGG+GGG | 0.607951 | 6_2:+72726143 | None:intergenic |
| GAAGAATTTGAAACGTGTGG+CGG | 0.609379 | 6_2:-72725840 | Msa0927990:CDS |
| ATGACTACATTCGCCAACGA+CGG | 0.612796 | 6_2:-72725907 | Msa0927990:CDS |
| AGAATTTGAAACGTGTGGCG+GGG | 0.614282 | 6_2:-72725838 | Msa0927990:CDS |
| TTTATGGTCATGGCTATGCA+TGG | 0.621553 | 6_2:-72722296 | Msa0927990:CDS |
| GGCTAGGCTACAAAACCTTG+TGG | 0.623864 | 6_2:-72720812 | Msa0927990:CDS |
| TTAGGGACTTTATCAGCTGG+AGG | 0.624926 | 6_2:-72723477 | Msa0927990:CDS |
| CATGATGCAATCTTCTCACA+GGG | 0.626037 | 6_2:-72726056 | Msa0927990:CDS |
| TAACTGTGTTGAATACGATA+GGG | 0.627098 | 6_2:-72722616 | Msa0927990:CDS |
| TGCATATATCCAATATGGGC+CGG | 0.627717 | 6_2:-72723090 | Msa0927990:CDS |
| AATTGGCTGGACCTGGACAG+TGG | 0.630767 | 6_2:-72723425 | Msa0927990:CDS |
| TCATGGAAAGATCTAAATGT+TGG | 0.633044 | 6_2:-72720648 | Msa0927990:three_prime_UTR |
| TTAAAGTAAGTGGAGCACTC+AGG | 0.643732 | 6_2:-72722328 | Msa0927990:CDS |
| TCTGATGATGTGGTTTACAG+CGG | 0.646018 | 6_2:-72722564 | Msa0927990:CDS |
| GCAGGAGCAACTCTTAGCAA+AGG | 0.647124 | 6_2:-72723513 | Msa0927990:intron |
| AGATGGGTGTGTCTGATCCA+AGG | 0.649272 | 6_2:-72725805 | Msa0927990:CDS |
| TGTGTTGTAACTTGAAAGTG+GGG | 0.649348 | 6_2:+72726188 | None:intergenic |
| AAACTCATGTCAATGAAAGG+TGG | 0.655476 | 6_2:-72725986 | Msa0927990:CDS |
| ATTCTTCAAAAGAATCCACA+AGG | 0.658164 | 6_2:+72720797 | None:intergenic |
| AATAGGTGATCAAGAACACA+CGG | 0.669501 | 6_2:+72723220 | None:intergenic |
| CTTAGCAAAGGTCTAAACAG+AGG | 0.672271 | 6_2:-72723501 | Msa0927990:CDS |
| ATGGTGAGCACGACTAAACG+AGG | 0.681802 | 6_2:-72726257 | Msa0927990:five_prime_UTR |
| GTGTTGTAACTTGAAAGTGG+GGG | 0.700678 | 6_2:+72726189 | None:intergenic |
| CCTGTGAGAAGATTGCATCA+TGG | 0.710798 | 6_2:+72726057 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTATCAAATTATTACA+CGG | - | chr6_2:72721400-72721419 | Msa0927990:intron | 10.0% |
| !! | GAATATTATATAATATATGT+AGG | - | chr6_2:72721588-72721607 | Msa0927990:intron | 10.0% |
| !! | ATATTATATAATATATGTAG+GGG | - | chr6_2:72721590-72721609 | Msa0927990:intron | 10.0% |
| !!! | TATTTTATTTTTGCTTATAT+AGG | - | chr6_2:72721928-72721947 | Msa0927990:intron | 10.0% |
| !! | TATTATTTGTTTATTTAAAG+TGG | - | chr6_2:72722022-72722041 | Msa0927990:intron | 10.0% |
| !! | TTTGAAAACTAAAAAATAAT+CGG | + | chr6_2:72722351-72722370 | None:intergenic | 10.0% |
| !! | TTACTTATTTATTTATTTAC+TGG | + | chr6_2:72722593-72722612 | None:intergenic | 10.0% |
| !! | GTAAATAAATAAATAAGTAA+AGG | - | chr6_2:72722593-72722612 | Msa0927990:CDS | 10.0% |
| !! | TTAGTTATTTATTTATTTAC+TGG | + | chr6_2:72722635-72722654 | None:intergenic | 10.0% |
| !! | GTAAATAAATAAATAACTAA+AGG | - | chr6_2:72722635-72722654 | Msa0927990:CDS | 10.0% |
| !!! | ATTTTATCAAATTATTACAC+GGG | - | chr6_2:72721401-72721420 | Msa0927990:intron | 15.0% |
| !! | AATGCATCTAATTTAAATTA+GGG | + | chr6_2:72721895-72721914 | None:intergenic | 15.0% |
| !! | CTAAAAATAGAAACAAATTT+CGG | + | chr6_2:72722137-72722156 | None:intergenic | 15.0% |
| !! | AAATTAAACAACATTAACAT+AGG | + | chr6_2:72722709-72722728 | None:intergenic | 15.0% |
| !!! | TTATACAATTGACTTAAATA+AGG | + | chr6_2:72722920-72722939 | None:intergenic | 15.0% |
| !!! | ATAAAATCATTTCAAGTTTA+AGG | + | chr6_2:72723141-72723160 | None:intergenic | 15.0% |
| !! | TTTCACTTATAAACAATAAT+TGG | - | chr6_2:72723376-72723395 | Msa0927990:intron | 15.0% |
| !! | ATTAAAATTTACAACATTTG+AGG | - | chr6_2:72723952-72723971 | Msa0927990:intron | 15.0% |
| !! | AAAAATTATGTTAAAGTAAG+TGG | - | chr6_2:72724589-72724608 | Msa0927990:intron | 15.0% |
| !! | TACTTATTATGAAGTATATA+CGG | + | chr6_2:72725180-72725199 | None:intergenic | 15.0% |
| !! | AAATTTAAATACTAATCAAG+TGG | + | chr6_2:72725467-72725486 | None:intergenic | 15.0% |
| !! | ATTACTCACCAATAATATAA+TGG | - | chr6_2:72720651-72720670 | Msa0927990:three_prime_UTR | 20.0% |
| !! | AATCATATATATGTCTGTTA+CGG | + | chr6_2:72721366-72721385 | None:intergenic | 20.0% |
| !! | CAATGCATCTAATTTAAATT+AGG | + | chr6_2:72721896-72721915 | None:intergenic | 20.0% |
| !! | ATTGTGAATGTTTCTTTATT+TGG | + | chr6_2:72721978-72721997 | None:intergenic | 20.0% |
| !!! | TTAGTTTTCAAAATTACAAG+TGG | - | chr6_2:72722359-72722378 | Msa0927990:CDS | 20.0% |
| !!! | TTTTATATAAAAAAGTGGGA+AGG | - | chr6_2:72722389-72722408 | Msa0927990:CDS | 20.0% |
| !!! | AATTTGCTTTTATACAATCA+CGG | + | chr6_2:72722516-72722535 | None:intergenic | 20.0% |
| !! | AAATACTGCTAAATTATCTT+CGG | + | chr6_2:72722818-72722837 | None:intergenic | 20.0% |
| !! | TAATAGTATTCAATTTGTGA+TGG | - | chr6_2:72722843-72722862 | Msa0927990:intron | 20.0% |
| !!! | CAAACTGGTTTTATTTTATT+AGG | - | chr6_2:72723277-72723296 | Msa0927990:CDS | 20.0% |
| !!! | TTATTTTATTAGGTTGACTT+AGG | - | chr6_2:72723287-72723306 | Msa0927990:intron | 20.0% |
| !! | TAGATGGTTATTACAAATTA+AGG | + | chr6_2:72724203-72724222 | None:intergenic | 20.0% |
| !! | AAACTAAATGTTATAGTAGA+TGG | + | chr6_2:72724219-72724238 | None:intergenic | 20.0% |
| !!! | TCTACTATAACATTTAGTTT+TGG | - | chr6_2:72724219-72724238 | Msa0927990:intron | 20.0% |
| !!! | ATAACTTTAAGTTTCTTTTC+AGG | - | chr6_2:72724270-72724289 | Msa0927990:intron | 20.0% |
| !!! | ACTTTAACATAATTTTTCCA+TGG | + | chr6_2:72724586-72724605 | None:intergenic | 20.0% |
| !! | ATTTGTACTTTACAATCAAT+AGG | + | chr6_2:72724938-72724957 | None:intergenic | 20.0% |
| !! | CAATTATATCATTATGTATG+TGG | - | chr6_2:72725133-72725152 | Msa0927990:intron | 20.0% |
| !! | ATACATGTATCTTTACTATT+TGG | - | chr6_2:72725336-72725355 | Msa0927990:intron | 20.0% |
| !! | GTTTAATTGTTTCAAATCTA+AGG | - | chr6_2:72726223-72726242 | Msa0927990:five_prime_UTR | 20.0% |
| !!! | TGAGTTTTTCCTTTTTTTCA+AGG | + | chr6_2:72720928-72720947 | None:intergenic | 25.0% |
| !! | TTATTCCATATATTTGAGAC+CGG | + | chr6_2:72721523-72721542 | None:intergenic | 25.0% |
| ! | TTATATAATATATGTAGGGG+CGG | - | chr6_2:72721593-72721612 | Msa0927990:intron | 25.0% |
| ! | GTATCCTTAAAAATGTCTTA+AGG | + | chr6_2:72721741-72721760 | None:intergenic | 25.0% |
| !!! | TAAATAGTGAGTTAGTTTGT+TGG | + | chr6_2:72722190-72722209 | None:intergenic | 25.0% |
| !!! | TTATGTCTTGATAGTTTGTT+TGG | + | chr6_2:72722220-72722239 | None:intergenic | 25.0% |
| !! | TTACTAGTTAGTTTAACAGT+GGG | + | chr6_2:72722250-72722269 | None:intergenic | 25.0% |
| !! | ATTACTAGTTAGTTTAACAG+TGG | + | chr6_2:72722251-72722270 | None:intergenic | 25.0% |
| !!! | ATTTGCTTTTATACAATCAC+GGG | + | chr6_2:72722515-72722534 | None:intergenic | 25.0% |
| ! | TTAATTAGCAAATTTGACCA+TGG | - | chr6_2:72722662-72722681 | Msa0927990:intron | 25.0% |
| ! | AAAACTATATCCAACAATGA+AGG | - | chr6_2:72723668-72723687 | Msa0927990:intron | 25.0% |
| ! | AGATACAATAACGTAACAAT+AGG | + | chr6_2:72723727-72723746 | None:intergenic | 25.0% |
| ! | TATTGTTACGTTATTGTATC+TGG | - | chr6_2:72723726-72723745 | Msa0927990:intron | 25.0% |
| ! | ATAAGCAAGAAAAGTCTATT+GGG | + | chr6_2:72723928-72723947 | None:intergenic | 25.0% |
| ! | AATAAGCAAGAAAAGTCTAT+TGG | + | chr6_2:72723929-72723948 | None:intergenic | 25.0% |
| ! | AATAAGCTGAAAATAGCTTA+TGG | + | chr6_2:72724047-72724066 | None:intergenic | 25.0% |
| !! | ATTAAGTTGTTTATCCAAAC+AGG | - | chr6_2:72724176-72724195 | Msa0927990:intron | 25.0% |
| ! | CTGATAACTTAAGTAGAAAA+AGG | + | chr6_2:72724438-72724457 | None:intergenic | 25.0% |
| ! | ACAAAATGTTTAGATATCCA+TGG | - | chr6_2:72724566-72724585 | Msa0927990:intron | 25.0% |
| !!! | ATGTATACTTTCTGAAATAC+AGG | - | chr6_2:72724654-72724673 | Msa0927990:intron | 25.0% |
| !!! | TTACTTCAATTTTTTCGTGT+CGG | - | chr6_2:72724731-72724750 | Msa0927990:intron | 25.0% |
| !! | ATCTAACCATTTTGCTTTAT+AGG | - | chr6_2:72724897-72724916 | Msa0927990:intron | 25.0% |
| !! | GTTTTTCCTATAAAGCAAAA+TGG | + | chr6_2:72724906-72724925 | None:intergenic | 25.0% |
| ! | ATCAAATTCAAGGAGATATA+TGG | - | chr6_2:72725028-72725047 | Msa0927990:intron | 25.0% |
| !! | TTGTGATAGTAGTTTGTAAT+AGG | - | chr6_2:72725105-72725124 | Msa0927990:intron | 25.0% |
| ! | AAGTATATACGGACATAATT+AGG | + | chr6_2:72725169-72725188 | None:intergenic | 25.0% |
| !!! | ATCACTTTTGATTGAATTTG+TGG | - | chr6_2:72726094-72726113 | Msa0927990:five_prime_UTR | 25.0% |
| TTCCTGTGATGTTATTAGTT+CGG | + | chr6_2:72720591-72720610 | None:intergenic | 30.0% | |
| CTAATAACATCACAGGAAAA+CGG | - | chr6_2:72720593-72720612 | Msa0927990:three_prime_UTR | 30.0% | |
| ! | TAGAAAGAAAGTTGATCTAC+TGG | + | chr6_2:72720714-72720733 | None:intergenic | 30.0% |
| TTGTGTTGTAACTTGAAAGT+GGG | + | chr6_2:72720743-72720762 | None:intergenic | 30.0% | |
| TTTGTGTTGTAACTTGAAAG+TGG | + | chr6_2:72720744-72720763 | None:intergenic | 30.0% | |
| TGGAGATGAAAAATGAAAGA+GGG | + | chr6_2:72720810-72720829 | None:intergenic | 30.0% | |
| TTGGAGATGAAAAATGAAAG+AGG | + | chr6_2:72720811-72720830 | None:intergenic | 30.0% | |
| !!! | ATGAGTTTTTTGAGGAATCT+GGG | + | chr6_2:72720848-72720867 | None:intergenic | 30.0% |
| !!! | TTTTTTCAAGGAAACTGTGA+CGG | + | chr6_2:72720916-72720935 | None:intergenic | 30.0% |
| TCACAGTTTCCTTGAAAAAA+AGG | - | chr6_2:72720916-72720935 | Msa0927990:CDS | 30.0% | |
| GAAAAACTCATGTCAATGAA+AGG | - | chr6_2:72720938-72720957 | Msa0927990:CDS | 30.0% | |
| ! | TTTTCTTAAACAACCGTTTC+CGG | - | chr6_2:72721201-72721220 | Msa0927990:CDS | 30.0% |
| !!! | CACTGTTGTAGTGTTTTAAT+CGG | - | chr6_2:72721449-72721468 | Msa0927990:intron | 30.0% |
| CATCTTAAAGTGAATAACTG+TGG | + | chr6_2:72721636-72721655 | None:intergenic | 30.0% | |
| ! | TAAGATGAATTCTAGCTACT+AGG | - | chr6_2:72721649-72721668 | Msa0927990:intron | 30.0% |
| ! | AGTGCCTTAAGACATTTTTA+AGG | - | chr6_2:72721734-72721753 | Msa0927990:intron | 30.0% |
| TAGAAACAAATTTCGGTTCA+TGG | + | chr6_2:72722130-72722149 | None:intergenic | 30.0% | |
| TGAAAAACACAGTCAATCAA+TGG | - | chr6_2:72722277-72722296 | Msa0927990:CDS | 30.0% | |
| !! | ATCACAACTTTTGAGAATGA+TGG | - | chr6_2:72722438-72722457 | Msa0927990:intron | 30.0% |
| ATCACTATCATTCTCACAAT+TGG | + | chr6_2:72722474-72722493 | None:intergenic | 30.0% | |
| !! | CCAAGTGTTTCTAGAATAAT+CGG | + | chr6_2:72722744-72722763 | None:intergenic | 30.0% |
| ! | CAAACTCGATTTGTAAATTG+AGG | + | chr6_2:72723103-72723122 | None:intergenic | 30.0% |
| AGGTATAAGCTAAGGAAAAA+AGG | + | chr6_2:72723596-72723615 | None:intergenic | 30.0% | |
| GAAAAACAAGGTATAAGCTA+AGG | + | chr6_2:72723604-72723623 | None:intergenic | 30.0% | |
| AGCATACTATCAGAAAAACA+AGG | + | chr6_2:72723616-72723635 | None:intergenic | 30.0% | |
| ! | TAGTATGCTATGTGATTTGT+AGG | - | chr6_2:72723627-72723646 | Msa0927990:intron | 30.0% |
| !! | TGGATATAGTTTTGCATATG+TGG | + | chr6_2:72723661-72723680 | None:intergenic | 30.0% |
| TATTCATAAGCCTTCATTGT+TGG | + | chr6_2:72723681-72723700 | None:intergenic | 30.0% | |
| ACAATGAAGGCTTATGAATA+TGG | - | chr6_2:72723681-72723700 | Msa0927990:intron | 30.0% | |
| ATGTGTGCATATATCCAATA+TGG | - | chr6_2:72723832-72723851 | Msa0927990:intron | 30.0% | |
| TGTGTGCATATATCCAATAT+GGG | - | chr6_2:72723833-72723852 | Msa0927990:intron | 30.0% | |
| AAGATTATGTAGATCTTCAC+CGG | + | chr6_2:72723859-72723878 | None:intergenic | 30.0% | |
| CTTGTTGCAAAAAATTTCAC+AGG | - | chr6_2:72723876-72723895 | Msa0927990:intron | 30.0% | |
| TTACAAATTAAGGTCCTGTT+TGG | + | chr6_2:72724193-72724212 | None:intergenic | 30.0% | |
| TATCGTATTCAACACAGTTA+AGG | + | chr6_2:72724311-72724330 | None:intergenic | 30.0% | |
| TTAACTGTGTTGAATACGAT+AGG | - | chr6_2:72724310-72724329 | Msa0927990:intron | 30.0% | |
| TAACTGTGTTGAATACGATA+GGG | - | chr6_2:72724311-72724330 | Msa0927990:intron | 30.0% | |
| ! | TGATACGTAAGAATTTTCGA+TGG | + | chr6_2:72724339-72724358 | None:intergenic | 30.0% |
| !!! | GAAGATGAGTTTTGCTATTT+GGG | - | chr6_2:72724525-72724544 | Msa0927990:intron | 30.0% |
| ! | AGCAAAATGGTTAGATTTTG+TGG | + | chr6_2:72724893-72724912 | None:intergenic | 30.0% |
| CTTTACAATCAATAGGAACT+GGG | + | chr6_2:72724931-72724950 | None:intergenic | 30.0% | |
| ACTTTACAATCAATAGGAAC+TGG | + | chr6_2:72724932-72724951 | None:intergenic | 30.0% | |
| TCCTTGAATTTGATATGAAG+GGG | + | chr6_2:72725022-72725041 | None:intergenic | 30.0% | |
| CTCCTTGAATTTGATATGAA+GGG | + | chr6_2:72725023-72725042 | None:intergenic | 30.0% | |
| TCTCCTTGAATTTGATATGA+AGG | + | chr6_2:72725024-72725043 | None:intergenic | 30.0% | |
| TAAGTAACTAGAATACTGCT+AGG | - | chr6_2:72725194-72725213 | Msa0927990:intron | 30.0% | |
| ACTTAGTACTAAATCACGTA+TGG | - | chr6_2:72725304-72725323 | Msa0927990:intron | 30.0% | |
| TAGTAAACGTGTATTTGCAT+AGG | + | chr6_2:72725523-72725542 | None:intergenic | 30.0% | |
| ! | AAACCTCCTTTTTGTGAAAT+AGG | - | chr6_2:72725542-72725561 | Msa0927990:intron | 30.0% |
| CGGTAACAAAGTTAAAAAGA+TGG | - | chr6_2:72725644-72725663 | Msa0927990:intron | 30.0% | |
| GTTAAAAAGATGGAGAAACT+AGG | - | chr6_2:72725654-72725673 | Msa0927990:intron | 30.0% | |
| TTTCTTCATCCATTTGTAAG+AGG | + | chr6_2:72725818-72725837 | None:intergenic | 30.0% | |
| AGTTAGAGTTCCAAAAAGTT+GGG | - | chr6_2:72725890-72725909 | Msa0927990:CDS | 30.0% | |
| ! | AGATTTTCTTCCCAACTTTT+TGG | + | chr6_2:72725903-72725922 | None:intergenic | 30.0% |
| AGCAGGTTTAATGATGTTAT+CGG | + | chr6_2:72725934-72725953 | None:intergenic | 30.0% | |
| ! | TTTCCTAAACATGTTTTCGT+CGG | + | chr6_2:72725967-72725986 | None:intergenic | 30.0% |
| !! | TTTGATTCTTCCACTTTTGT+TGG | + | chr6_2:72726032-72726051 | None:intergenic | 30.0% |
| TAATGAACTAGCACTTTCAT+AGG | + | chr6_2:72726057-72726076 | None:intergenic | 30.0% | |
| !! | TTTTGATTGAATTTGTGGCT+AGG | - | chr6_2:72726099-72726118 | Msa0927990:five_prime_UTR | 30.0% |
| ATTCTTCAAAAGAATCCACA+AGG | + | chr6_2:72726133-72726152 | None:intergenic | 30.0% | |
| !! | GTGGATTCTTTTGAAGAATT+AGG | - | chr6_2:72726134-72726153 | Msa0927990:five_prime_UTR | 30.0% |
| ATACTTTGTAACATGTGTCA+TGG | - | chr6_2:72726262-72726281 | Msa0927990:five_prime_UTR | 30.0% | |
| TCATGGAAAGATCTAAATGT+TGG | - | chr6_2:72726279-72726298 | Msa0927990:five_prime_UTR | 30.0% | |
| TGGTGAGTAATAGAAGACTT+TGG | + | chr6_2:72720642-72720661 | None:intergenic | 35.0% | |
| CGTGCTCACCATTATATTAT+TGG | + | chr6_2:72720662-72720681 | None:intergenic | 35.0% | |
| TGTGTTGTAACTTGAAAGTG+GGG | + | chr6_2:72720742-72720761 | None:intergenic | 35.0% | |
| GGAGATGAAAAATGAAAGAG+GGG | + | chr6_2:72720809-72720828 | None:intergenic | 35.0% | |
| !!! | TGAGTTTTTTGAGGAATCTG+GGG | + | chr6_2:72720847-72720866 | None:intergenic | 35.0% |
| !!! | GATGAGTTTTTTGAGGAATC+TGG | + | chr6_2:72720849-72720868 | None:intergenic | 35.0% |
| !!! | TCATGGTGATGAGTTTTTTG+AGG | + | chr6_2:72720856-72720875 | None:intergenic | 35.0% |
| AAACTCATGTCAATGAAAGG+TGG | - | chr6_2:72720941-72720960 | Msa0927990:CDS | 35.0% | |
| ! | TTGGAAGAATTTGAAACGTG+TGG | - | chr6_2:72721084-72721103 | Msa0927990:CDS | 35.0% |
| ! | TTTGTGTTTTCAGCGAAGAT+GGG | - | chr6_2:72721148-72721167 | Msa0927990:CDS | 35.0% |
| ! | AGACATTCGATCAGAAGTAT+CGG | + | chr6_2:72721327-72721346 | None:intergenic | 35.0% |
| TATCAAATTATTACACGGGC+CGG | - | chr6_2:72721405-72721424 | Msa0927990:intron | 35.0% | |
| AAACACTACAACAGTGTCAT+TGG | + | chr6_2:72721445-72721464 | None:intergenic | 35.0% | |
| TTGCTTATATAGGAGACTAG+AGG | - | chr6_2:72721938-72721957 | Msa0927990:intron | 35.0% | |
| !!! | AGTGGGAAGGAGAAATTTTT+TGG | - | chr6_2:72722402-72722421 | Msa0927990:intron | 35.0% |
| ATTAGCAAATTTGACCATGG+TGG | - | chr6_2:72722665-72722684 | Msa0927990:intron | 35.0% | |
| TTAGCAAATTTGACCATGGT+GGG | - | chr6_2:72722666-72722685 | Msa0927990:intron | 35.0% | |
| ! | CCGATTATTCTAGAAACACT+TGG | - | chr6_2:72722741-72722760 | Msa0927990:intron | 35.0% |
| GAAAATATGCTCTTCAACCA+TGG | - | chr6_2:72722766-72722785 | Msa0927990:intron | 35.0% | |
| TGTGTCATAATATCAGACCT+GGG | + | chr6_2:72722795-72722814 | None:intergenic | 35.0% | |
| ! | ATTTGTGATGGTGAAATCAC+AGG | - | chr6_2:72722855-72722874 | Msa0927990:intron | 35.0% |
| GATCTATTCAAGCCATATGT+CGG | + | chr6_2:72723205-72723224 | None:intergenic | 35.0% | |
| GAAGTTCACACTTTACAAAC+TGG | - | chr6_2:72723262-72723281 | Msa0927990:CDS | 35.0% | |
| !!! | GATGAAAGGTTTTTAGGTTC+TGG | + | chr6_2:72723314-72723333 | None:intergenic | 35.0% |
| ! | GAGCTTGATGAAAGGTTTTT+AGG | + | chr6_2:72723320-72723339 | None:intergenic | 35.0% |
| TGGTCAAAATGTATTTGTGC+AGG | - | chr6_2:72723396-72723415 | Msa0927990:CDS | 35.0% | |
| AAAGGTCTAAACAGAGGATT+AGG | - | chr6_2:72723432-72723451 | Msa0927990:CDS | 35.0% | |
| AAGGTCTAAACAGAGGATTA+GGG | - | chr6_2:72723433-72723452 | Msa0927990:CDS | 35.0% | |
| ATTGGGAATGCTGTCAAAAT+TGG | - | chr6_2:72723485-72723504 | Msa0927990:CDS | 35.0% | |
| GTGGGAAGAAATTGTAATCA+TGG | - | chr6_2:72723521-72723540 | Msa0927990:intron | 35.0% | |
| ATGGTTAGCATCTTCATTGT+AGG | - | chr6_2:72723540-72723559 | Msa0927990:intron | 35.0% | |
| AATAGGTGATCAAGAACACA+CGG | + | chr6_2:72723710-72723729 | None:intergenic | 35.0% | |
| ATTGTATCTGGATATCGAAC+CGG | - | chr6_2:72723738-72723757 | Msa0927990:intron | 35.0% | |
| ! | AGATTTTTGCTCATTGCTCT+TGG | - | chr6_2:72723786-72723805 | Msa0927990:intron | 35.0% |
| !! | GCTGTTTTCATAAGATATCC+TGG | + | chr6_2:72724082-72724101 | None:intergenic | 35.0% |
| !!! | GGAAGATGAGTTTTGCTATT+TGG | - | chr6_2:72724524-72724543 | Msa0927990:intron | 35.0% |
| ! | AACATTTTGTAACGACCATG+AGG | + | chr6_2:72724556-72724575 | None:intergenic | 35.0% |
| CAAGAATCAAACGTCATTTC+TGG | + | chr6_2:72724835-72724854 | None:intergenic | 35.0% | |
| CAGAAATGACGTTTGATTCT+TGG | - | chr6_2:72724833-72724852 | Msa0927990:intron | 35.0% | |
| CCTTGAATTTGATATGAAGG+GGG | + | chr6_2:72725021-72725040 | None:intergenic | 35.0% | |
| GTCTTAATGGTTTCCTGTAT+AGG | - | chr6_2:72725081-72725100 | Msa0927990:intron | 35.0% | |
| CTACTATCACAATCCTATAC+AGG | + | chr6_2:72725097-72725116 | None:intergenic | 35.0% | |
| ACCACAGATTGCAGAAAATA+GGG | - | chr6_2:72725242-72725261 | Msa0927990:intron | 35.0% | |
| TAGTACTAAATCACGTATGG+CGG | - | chr6_2:72725307-72725326 | Msa0927990:intron | 35.0% | |
| GCTTAGTACTAAATCACGTA+TGG | - | chr6_2:72725360-72725379 | Msa0927990:intron | 35.0% | |
| TAGTACTAAATCACGTATGG+CGG | - | chr6_2:72725307-72725326 | Msa0927990:intron | 35.0% | |
| CGGATATATATTAGCGCTAT+AGG | + | chr6_2:72725421-72725440 | None:intergenic | 35.0% | |
| !! | AAAGGAGTGTTGTCAAATAG+CGG | + | chr6_2:72725441-72725460 | None:intergenic | 35.0% |
| ATACTAATCAAGTGGTGCAA+AGG | + | chr6_2:72725459-72725478 | None:intergenic | 35.0% | |
| TTACCTTCTTAAGCTCTTTG+CGG | + | chr6_2:72725593-72725612 | None:intergenic | 35.0% | |
| TGAGAAACATTCTCGTTTCT+TGG | + | chr6_2:72725792-72725811 | None:intergenic | 35.0% | |
| TTCTCAAGACCTCTTACAAA+TGG | - | chr6_2:72725806-72725825 | Msa0927990:CDS | 35.0% | |
| GGATGAAGAAAGACATTTCT+TGG | - | chr6_2:72725827-72725846 | Msa0927990:CDS | 35.0% | |
| CAGTTAGAGTTCCAAAAAGT+TGG | - | chr6_2:72725889-72725908 | Msa0927990:CDS | 35.0% | |
| GCAGGTTTAATGATGTTATC+GGG | + | chr6_2:72725933-72725952 | None:intergenic | 35.0% | |
| TTACCGACGAAAACATGTTT+AGG | - | chr6_2:72725961-72725980 | Msa0927990:CDS | 35.0% | |
| AGGTGAGAAAGCAAAGTTTA+AGG | - | chr6_2:72726154-72726173 | Msa0927990:five_prime_UTR | 35.0% | |
| !! | CAAGTTCTTGTTGTTCAAGA+GGG | + | chr6_2:72726181-72726200 | None:intergenic | 35.0% |
| !! | ACAAGTTCTTGTTGTTCAAG+AGG | + | chr6_2:72726182-72726201 | None:intergenic | 35.0% |
| CAACAAGAACTTGTAACATC+TGG | - | chr6_2:72726188-72726207 | Msa0927990:five_prime_UTR | 35.0% | |
| AAGAACTTGTAACATCTGGT+TGG | - | chr6_2:72726192-72726211 | Msa0927990:five_prime_UTR | 35.0% | |
| AGCCGAACTAATAACATCAC+AGG | - | chr6_2:72720586-72720605 | Msa0927990:three_prime_UTR | 40.0% | |
| ! | AAGTTGATCTACTGGTCTGT+TGG | + | chr6_2:72720706-72720725 | None:intergenic | 40.0% |
| GTGTTGTAACTTGAAAGTGG+GGG | + | chr6_2:72720741-72720760 | None:intergenic | 40.0% | |
| GTTTGTTTGAAGATTGTGGG+GGG | + | chr6_2:72720787-72720806 | None:intergenic | 40.0% | |
| ! | GGTTTGTTTGAAGATTGTGG+GGG | + | chr6_2:72720788-72720807 | None:intergenic | 40.0% |
| ! | GGGTTTGTTTGAAGATTGTG+GGG | + | chr6_2:72720789-72720808 | None:intergenic | 40.0% |
| ! | GGGGTTTGTTTGAAGATTGT+GGG | + | chr6_2:72720790-72720809 | None:intergenic | 40.0% |
| ! | AGGGGTTTGTTTGAAGATTG+TGG | + | chr6_2:72720791-72720810 | None:intergenic | 40.0% |
| !!! | GAATCTGGGGAAGTTTTTTG+AGG | + | chr6_2:72720834-72720853 | None:intergenic | 40.0% |
| CATGATGCAATCTTCTCACA+GGG | - | chr6_2:72720871-72720890 | Msa0927990:CDS | 40.0% | |
| AATGTAGTCATCATCGTCGT+CGG | + | chr6_2:72721011-72721030 | None:intergenic | 40.0% | |
| ! | TCGTTTCGAGGATTTTCAGA+TGG | - | chr6_2:72721049-72721068 | Msa0927990:CDS | 40.0% |
| ! | CGTTTCGAGGATTTTCAGAT+GGG | - | chr6_2:72721050-72721069 | Msa0927990:CDS | 40.0% |
| ! | GAAGAATTTGAAACGTGTGG+CGG | - | chr6_2:72721087-72721106 | Msa0927990:CDS | 40.0% |
| ! | AAGAATTTGAAACGTGTGGC+GGG | - | chr6_2:72721088-72721107 | Msa0927990:CDS | 40.0% |
| GCTGAAAACACAAACTTCCT+TGG | + | chr6_2:72721142-72721161 | None:intergenic | 40.0% | |
| ! | GTTTGTGTTTTCAGCGAAGA+TGG | - | chr6_2:72721147-72721166 | Msa0927990:CDS | 40.0% |
| !! | ATGTTGGGAAGTACTCTGTT+TGG | - | chr6_2:72721224-72721243 | Msa0927990:CDS | 40.0% |
| !! | TGTTGGGAAGTACTCTGTTT+GGG | - | chr6_2:72721225-72721244 | Msa0927990:CDS | 40.0% |
| ! | GTCGTCTTTGAGTTCAGTAT+AGG | - | chr6_2:72721265-72721284 | Msa0927990:CDS | 40.0% |
| ! | ATTGGTGGCAATAATCTCAC+CGG | + | chr6_2:72721427-72721446 | None:intergenic | 40.0% |
| TCCATCCGGTCTCAAATATA+TGG | - | chr6_2:72721515-72721534 | Msa0927990:intron | 40.0% | |
| ! | TCCATATATTTGAGACCGGA+TGG | + | chr6_2:72721519-72721538 | None:intergenic | 40.0% |
| !! | TGTTCTTAAAGAGTGCCCTT+CGG | - | chr6_2:72721853-72721872 | Msa0927990:intron | 40.0% |
| AATGCTAATAAGTGCCCGAA+GGG | + | chr6_2:72721871-72721890 | None:intergenic | 40.0% | |
| AAATGCTAATAAGTGCCCGA+AGG | + | chr6_2:72721872-72721891 | None:intergenic | 40.0% | |
| ! | AACAATTTTCTGTCCCACCA+TGG | + | chr6_2:72722682-72722701 | None:intergenic | 40.0% |
| GTGTGTCATAATATCAGACC+TGG | + | chr6_2:72722796-72722815 | None:intergenic | 40.0% | |
| ACAATCTTCACCGTACAAGT+TGG | - | chr6_2:72723059-72723078 | Msa0927990:CDS | 40.0% | |
| CGCTTTACAACCAACTTGTA+CGG | + | chr6_2:72723072-72723091 | None:intergenic | 40.0% | |
| CATATGACAAGTCCGACATA+TGG | - | chr6_2:72723190-72723209 | Msa0927990:CDS | 40.0% | |
| CTTTCATCAAGCTCTCCATT+GGG | - | chr6_2:72723326-72723345 | Msa0927990:intron | 40.0% | |
| CTTAGCAAAGGTCTAAACAG+AGG | - | chr6_2:72723426-72723445 | Msa0927990:CDS | 40.0% | |
| TGCTGTATGAAGAAAGTCTC+CGG | + | chr6_2:72723760-72723779 | None:intergenic | 40.0% | |
| TGCATATATCCAATATGGGC+CGG | - | chr6_2:72723837-72723856 | Msa0927990:intron | 40.0% | |
| ! | TACAACATTTGAGGCCTGTT+TGG | - | chr6_2:72723961-72723980 | Msa0927990:intron | 40.0% |
| ! | ACAACATTTGAGGCCTGTTT+GGG | - | chr6_2:72723962-72723981 | Msa0927990:intron | 40.0% |
| ATAAGTCGTTCTCGTAAGCT+CGG | + | chr6_2:72724017-72724036 | None:intergenic | 40.0% | |
| AAGATATCCTGGTGAGCTTA+TGG | + | chr6_2:72724071-72724090 | None:intergenic | 40.0% | |
| ! | GTATCAAGCTTCTGATGATG+TGG | - | chr6_2:72724353-72724372 | Msa0927990:intron | 40.0% |
| ! | TCTGATGATGTGGTTTACAG+CGG | - | chr6_2:72724363-72724382 | Msa0927990:intron | 40.0% |
| TACAAGCACAGAAGATGCAT+TGG | - | chr6_2:72724407-72724426 | Msa0927990:intron | 40.0% | |
| ! | GCGTTTGTGTGTTGTTGATT+CGG | - | chr6_2:72724503-72724522 | Msa0927990:intron | 40.0% |
| ! | ATTTTGTAACGACCATGAGG+TGG | + | chr6_2:72724553-72724572 | None:intergenic | 40.0% |
| ! | TTAAAGTAAGTGGAGCACTC+AGG | - | chr6_2:72724599-72724618 | Msa0927990:intron | 40.0% |
| ! | ACTCAGGCATTGTGCATTTA+TGG | - | chr6_2:72724615-72724634 | Msa0927990:intron | 40.0% |
| GCATTGTGCATTTATGGTCA+TGG | - | chr6_2:72724621-72724640 | Msa0927990:intron | 40.0% | |
| TTTATGGTCATGGCTATGCA+TGG | - | chr6_2:72724631-72724650 | Msa0927990:intron | 40.0% | |
| CACAGAAAATGTTGCTACAC+AGG | + | chr6_2:72724682-72724701 | None:intergenic | 40.0% | |
| GGGCAAAGGATAACAAAAAG+GGG | + | chr6_2:72725001-72725020 | None:intergenic | 40.0% | |
| GGGGCAAAGGATAACAAAAA+GGG | + | chr6_2:72725002-72725021 | None:intergenic | 40.0% | |
| ATTTGATATGAAGGGGGCAA+AGG | + | chr6_2:72725015-72725034 | None:intergenic | 40.0% | |
| CCCCCTTCATATCAAATTCA+AGG | - | chr6_2:72725018-72725037 | Msa0927990:intron | 40.0% | |
| GTGCTAAACTAGAGATGTTG+CGG | - | chr6_2:72725050-72725069 | Msa0927990:intron | 40.0% | |
| TGCTAAACTAGAGATGTTGC+GGG | - | chr6_2:72725051-72725070 | Msa0927990:intron | 40.0% | |
| GTAACTAGAATACTGCTAGG+TGG | - | chr6_2:72725197-72725216 | Msa0927990:intron | 40.0% | |
| GGTCAACAACATTGTGCAAA+GGG | + | chr6_2:72725225-72725244 | None:intergenic | 40.0% | |
| TGGTCAACAACATTGTGCAA+AGG | + | chr6_2:72725226-72725245 | None:intergenic | 40.0% | |
| GACCACAGATTGCAGAAAAT+AGG | - | chr6_2:72725241-72725260 | Msa0927990:intron | 40.0% | |
| CCACAGATTGCAGAAAATAG+GGG | - | chr6_2:72725243-72725262 | Msa0927990:intron | 40.0% | |
| GAGCCTATTTCACAAAAAGG+AGG | + | chr6_2:72725548-72725567 | None:intergenic | 40.0% | |
| CTGGAGCCTATTTCACAAAA+AGG | + | chr6_2:72725551-72725570 | None:intergenic | 40.0% | |
| ! | TTTTGTGAAATAGGCTCCAG+CGG | - | chr6_2:72725551-72725570 | Msa0927990:intron | 40.0% |
| TTTCCGCAAAGAGCTTAAGA+AGG | - | chr6_2:72725587-72725606 | Msa0927990:intron | 40.0% | |
| ACTAAAGTTCTACGCGAACT+CGG | - | chr6_2:72725624-72725643 | Msa0927990:intron | 40.0% | |
| TTCTTGTAAATGCAGAGCTG+TGG | - | chr6_2:72725751-72725770 | Msa0927990:CDS | 40.0% | |
| TCTTGTAAATGCAGAGCTGT+GGG | - | chr6_2:72725752-72725771 | Msa0927990:CDS | 40.0% | |
| AGATGTGAAGACAAAGATGC+TGG | + | chr6_2:72725990-72726009 | None:intergenic | 40.0% | |
| AGAAGATGCACCAACAAAAG+TGG | - | chr6_2:72726019-72726038 | Msa0927990:CDS | 40.0% | |
| TTGTAACATCTGGTTGGACT+AGG | - | chr6_2:72726198-72726217 | Msa0927990:five_prime_UTR | 40.0% | |
| !! | CTACTGGTCTGTTGGTAATG+CGG | + | chr6_2:72720698-72720717 | None:intergenic | 45.0% |
| TGTAACTTGAAAGTGGGGGA+GGG | + | chr6_2:72720737-72720756 | None:intergenic | 45.0% | |
| TTGTAACTTGAAAGTGGGGG+AGG | + | chr6_2:72720738-72720757 | None:intergenic | 45.0% | |
| !!! | CTGGGGAAGTTTTTTGAGGT+TGG | + | chr6_2:72720830-72720849 | None:intergenic | 45.0% |
| CCTGTGAGAAGATTGCATCA+TGG | + | chr6_2:72720873-72720892 | None:intergenic | 45.0% | |
| CCATGATGCAATCTTCTCAC+AGG | - | chr6_2:72720870-72720889 | Msa0927990:CDS | 45.0% | |
| ! | TTCTCACAGGGTACCCAAAT+TGG | - | chr6_2:72720883-72720902 | Msa0927990:CDS | 45.0% |
| ! | TCTCACAGGGTACCCAAATT+GGG | - | chr6_2:72720884-72720903 | Msa0927990:CDS | 45.0% |
| TGACGGAAGGAACCCAATTT+GGG | + | chr6_2:72720899-72720918 | None:intergenic | 45.0% | |
| ! | TTCAAGGAAACTGTGACGGA+AGG | + | chr6_2:72720912-72720931 | None:intergenic | 45.0% |
| CTCATGTCAATGAAAGGTGG+CGG | - | chr6_2:72720944-72720963 | Msa0927990:CDS | 45.0% | |
| ACAAATCGGCATCCCTTTAC+CGG | - | chr6_2:72720982-72721001 | Msa0927990:CDS | 45.0% | |
| ATGACTACATTCGCCAACGA+CGG | - | chr6_2:72721020-72721039 | Msa0927990:CDS | 45.0% | |
| ! | CAGATGGGATCGTTGAGTTT+TGG | - | chr6_2:72721065-72721084 | Msa0927990:CDS | 45.0% |
| ! | AGAATTTGAAACGTGTGGCG+GGG | - | chr6_2:72721089-72721108 | Msa0927990:CDS | 45.0% |
| !! | GTTTTCAGCGAAGATGGGTT+TGG | - | chr6_2:72721153-72721172 | Msa0927990:CDS | 45.0% |
| AAACAACCGTTTCCGGATGT+TGG | - | chr6_2:72721208-72721227 | Msa0927990:CDS | 45.0% | |
| AACAACCGTTTCCGGATGTT+GGG | - | chr6_2:72721209-72721228 | Msa0927990:CDS | 45.0% | |
| TACTTCCCAACATCCGGAAA+CGG | + | chr6_2:72721217-72721236 | None:intergenic | 45.0% | |
| ! | ACAGAGTACTTCCCAACATC+CGG | + | chr6_2:72721223-72721242 | None:intergenic | 45.0% |
| CTGATCGAATGTCTGTGTTC+CGG | - | chr6_2:72721333-72721352 | Msa0927990:CDS | 45.0% | |
| ! | CACTACAACAGTGTCATTGG+TGG | + | chr6_2:72721442-72721461 | None:intergenic | 45.0% |
| AAGACACGAACACGGTTACA+TGG | + | chr6_2:72721478-72721497 | None:intergenic | 45.0% | |
| TACGAAGCAAGACACGAACA+CGG | + | chr6_2:72721486-72721505 | None:intergenic | 45.0% | |
| TCGTAGTGACTTACTCCATC+CGG | - | chr6_2:72721501-72721520 | Msa0927990:intron | 45.0% | |
| ! | GTGAATAACTGTGGTGTCAG+AGG | + | chr6_2:72721627-72721646 | None:intergenic | 45.0% |
| !! | GTTCTTAAAGAGTGCCCTTC+GGG | - | chr6_2:72721854-72721873 | Msa0927990:intron | 45.0% |
| !! | TCCATGTTCTGCGTTGACTA+TGG | - | chr6_2:72723005-72723024 | Msa0927990:intron | 45.0% |
| TCCATAGTCAACGCAGAACA+TGG | + | chr6_2:72723009-72723028 | None:intergenic | 45.0% | |
| ATGTCGGACTTGTCATATGC+TGG | + | chr6_2:72723189-72723208 | None:intergenic | 45.0% | |
| CCAATGGAGAGCTTGATGAA+AGG | + | chr6_2:72723328-72723347 | None:intergenic | 45.0% | |
| CCTTTCATCAAGCTCTCCAT+TGG | - | chr6_2:72723325-72723344 | Msa0927990:intron | 45.0% | |
| ! | TACGTGTCTTGTTGACCCAA+TGG | + | chr6_2:72723344-72723363 | None:intergenic | 45.0% |
| GGATTAGGGACTTTATCAGC+TGG | - | chr6_2:72723447-72723466 | Msa0927990:CDS | 45.0% | |
| TTAGGGACTTTATCAGCTGG+AGG | - | chr6_2:72723450-72723469 | Msa0927990:CDS | 45.0% | |
| ! | TGGAGGACTTGCTTTAGCAT+TGG | - | chr6_2:72723467-72723486 | Msa0927990:CDS | 45.0% |
| ! | GGAGGACTTGCTTTAGCATT+GGG | - | chr6_2:72723468-72723487 | Msa0927990:CDS | 45.0% |
| GGAATGCTGTCAAAATTGGC+TGG | - | chr6_2:72723489-72723508 | Msa0927990:CDS | 45.0% | |
| ACAATTTCTTCCCACTGTCC+AGG | + | chr6_2:72723516-72723535 | None:intergenic | 45.0% | |
| GGCGTAGCAACATCATTAGA+AGG | - | chr6_2:72723897-72723916 | Msa0927990:intron | 45.0% | |
| CTTATTGCCATAAGCTCACC+AGG | - | chr6_2:72724061-72724080 | Msa0927990:intron | 45.0% | |
| ! | CTTCAGATTAAAGGCGTGTC+TGG | + | chr6_2:72724783-72724802 | None:intergenic | 45.0% |
| ! | ACGCCTTTAATCTGAAGCGT+CGG | - | chr6_2:72724786-72724805 | Msa0927990:intron | 45.0% |
| ! | GTACCGACGCTTCAGATTAA+AGG | + | chr6_2:72724792-72724811 | None:intergenic | 45.0% |
| GGGGGCAAAGGATAACAAAA+AGG | + | chr6_2:72725003-72725022 | None:intergenic | 45.0% | |
| !! | TGCGGGAGTCTTAGTCTTAA+TGG | - | chr6_2:72725068-72725087 | Msa0927990:intron | 45.0% |
| ! | CCCCTATTTTCTGCAATCTG+TGG | + | chr6_2:72725246-72725265 | None:intergenic | 45.0% |
| CCAAATAGTGACTGCAGCAT+AGG | + | chr6_2:72725283-72725302 | None:intergenic | 45.0% | |
| CCTATGCTGCAGTCACTATT+TGG | - | chr6_2:72725280-72725299 | Msa0927990:intron | 45.0% | |
| GCGTAGAACTTTAGTCGCTT+CGG | + | chr6_2:72725619-72725638 | None:intergenic | 45.0% | |
| AATGCAGAGCTGTGGGAAAT+AGG | - | chr6_2:72725759-72725778 | Msa0927990:CDS | 45.0% | |
| AGCTGTGGGAAATAGGTAAC+AGG | - | chr6_2:72725766-72725785 | Msa0927990:CDS | 45.0% | |
| TCGTCGGTAACAACATTAGC+AGG | + | chr6_2:72725951-72725970 | None:intergenic | 45.0% | |
| !! | AATATTATATAATATATGTA+GGG | - | chr6_2:72721589-72721608 | Msa0927990:intron | 5.0% |
| !!! | ATACTTTTTAAATTATTAAT+CGG | + | chr6_2:72721706-72721725 | None:intergenic | 5.0% |
| !!! | ATTTTTTTTATATAAAAAAG+TGG | - | chr6_2:72722384-72722403 | Msa0927990:CDS | 5.0% |
| !!! | TTTTTTTTATATAAAAAAGT+GGG | - | chr6_2:72722385-72722404 | Msa0927990:CDS | 5.0% |
| !! | ATGAATAAATAAATAAATAA+AGG | - | chr6_2:72722552-72722571 | Msa0927990:CDS | 5.0% |
| ATGGTGAGCACGACTAAACG+AGG | - | chr6_2:72720670-72720689 | Msa0927990:three_prime_UTR | 50.0% | |
| ! | GTGACGGAAGGAACCCAATT+TGG | + | chr6_2:72720900-72720919 | None:intergenic | 50.0% |
| ! | ATGTCAATGAAAGGTGGCGG+TGG | - | chr6_2:72720947-72720966 | Msa0927990:CDS | 50.0% |
| GGCGGTGGGTATTCACAAAT+CGG | - | chr6_2:72720968-72720987 | Msa0927990:CDS | 50.0% | |
| TCATCATCGTCGTCGGATTC+CGG | + | chr6_2:72721004-72721023 | None:intergenic | 50.0% | |
| GAAACGAAAACCACCGTCGT+TGG | + | chr6_2:72721036-72721055 | None:intergenic | 50.0% | |
| AGATGGGTGTGTCTGATCCA+AGG | - | chr6_2:72721122-72721141 | Msa0927990:CDS | 50.0% | |
| ! | TGTCTGTTACGGTGTCAGAC+CGG | + | chr6_2:72721355-72721374 | None:intergenic | 50.0% |
| ! | GCGAGTTTAGCTCAGTTCGT+AGG | - | chr6_2:72721566-72721585 | Msa0927990:intron | 50.0% |
| ATATCAGACCTGGGTCACCA+TGG | + | chr6_2:72722786-72722805 | None:intergenic | 50.0% | |
| GCAGGAGCAACTCTTAGCAA+AGG | - | chr6_2:72723414-72723433 | Msa0927990:CDS | 50.0% | |
| CTGTCAAAATTGGCTGGACC+TGG | - | chr6_2:72723495-72723514 | Msa0927990:CDS | 50.0% | |
| !! | CTTGGTGCTGCTGTATCTGT+TGG | - | chr6_2:72723804-72723823 | Msa0927990:intron | 50.0% |
| AGATCTTCACCGGCCCATAT+TGG | + | chr6_2:72723849-72723868 | None:intergenic | 50.0% | |
| ! | TTTGAGGCCTGTTTGGGTAC+TGG | - | chr6_2:72723968-72723987 | Msa0927990:intron | 50.0% |
| GTTTGTGCCAGTACCCAAAC+AGG | + | chr6_2:72723978-72723997 | None:intergenic | 50.0% | |
| GGCTAGGCTACAAAACCTTG+TGG | - | chr6_2:72726115-72726134 | Msa0927990:five_prime_UTR | 50.0% | |
| ! | TCAATGAAAGGTGGCGGTGG+CGG | - | chr6_2:72720950-72720969 | Msa0927990:CDS | 55.0% |
| CGTCGTCGGATTCCGGTAAA+GGG | + | chr6_2:72720997-72721016 | None:intergenic | 55.0% | |
| TCGTCGTCGGATTCCGGTAA+AGG | + | chr6_2:72720998-72721017 | None:intergenic | 55.0% | |
| ACTACATTCGCCAACGACGG+TGG | - | chr6_2:72721023-72721042 | Msa0927990:CDS | 55.0% | |
| ! | CGACGGTGGTTTTCGTTTCG+AGG | - | chr6_2:72721037-72721056 | Msa0927990:CDS | 55.0% |
| CTCTTCAACCATGGTGACCC+AGG | - | chr6_2:72722775-72722794 | Msa0927990:intron | 55.0% | |
| AATTGGCTGGACCTGGACAG+TGG | - | chr6_2:72723502-72723521 | Msa0927990:CDS | 55.0% | |
| ATTGGCTGGACCTGGACAGT+GGG | - | chr6_2:72723503-72723522 | Msa0927990:CDS | 55.0% | |
| GCTATTTGGGAGCCACCTCA+TGG | - | chr6_2:72724538-72724557 | Msa0927990:intron | 55.0% | |
| ! | AACGTGTGGCGGGGAAAGCA+TGG | - | chr6_2:72721098-72721117 | Msa0927990:CDS | 60.0% |
| ! | ACGTGTGGCGGGGAAAGCAT+GGG | - | chr6_2:72721099-72721118 | Msa0927990:CDS | 60.0% |
| ! | GCGGGGAAAGCATGGGAGAT+GGG | - | chr6_2:72721106-72721125 | Msa0927990:CDS | 60.0% |
| ! | ATGAAAGGTGGCGGTGGCGG+TGG | - | chr6_2:72720953-72720972 | Msa0927990:CDS | 65.0% |
| ! | TGAAAGGTGGCGGTGGCGGT+GGG | - | chr6_2:72720954-72720973 | Msa0927990:CDS | 65.0% |
| ! | GGCGGGGAAAGCATGGGAGA+TGG | - | chr6_2:72721105-72721124 | Msa0927990:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 72720585 | 72726364 | 72720585 | ID=Msa0927990;Name=Msa0927990 |
| chr6_2 | mRNA | 72720585 | 72726364 | 72720585 | ID=Msa0927990-mRNA-1;Parent=Msa0927990;Name=Msa0927990-mRNA-1;_AED=0.03;_eAED=0.03;_QI=287|1|1|1|1|1|6|114|599 |
| chr6_2 | exon | 72720585 | 72721385 | 72720585 | ID=Msa0927990-mRNA-1:exon:12346;Parent=Msa0927990-mRNA-1 |
| chr6_2 | exon | 72722274 | 72722420 | 72722274 | ID=Msa0927990-mRNA-1:exon:12345;Parent=Msa0927990-mRNA-1 |
| chr6_2 | exon | 72722521 | 72722657 | 72722521 | ID=Msa0927990-mRNA-1:exon:12344;Parent=Msa0927990-mRNA-1 |
| chr6_2 | exon | 72723031 | 72723300 | 72723031 | ID=Msa0927990-mRNA-1:exon:12343;Parent=Msa0927990-mRNA-1 |
| chr6_2 | exon | 72723388 | 72723531 | 72723388 | ID=Msa0927990-mRNA-1:exon:12342;Parent=Msa0927990-mRNA-1 |
| chr6_2 | exon | 72725663 | 72726364 | 72725663 | ID=Msa0927990-mRNA-1:exon:12341;Parent=Msa0927990-mRNA-1 |
| chr6_2 | five_prime_UTR | 72726078 | 72726364 | 72726078 | ID=Msa0927990-mRNA-1:five_prime_utr;Parent=Msa0927990-mRNA-1 |
| chr6_2 | CDS | 72725663 | 72726077 | 72725663 | ID=Msa0927990-mRNA-1:cds;Parent=Msa0927990-mRNA-1 |
| chr6_2 | CDS | 72723388 | 72723531 | 72723388 | ID=Msa0927990-mRNA-1:cds;Parent=Msa0927990-mRNA-1 |
| chr6_2 | CDS | 72723031 | 72723300 | 72723031 | ID=Msa0927990-mRNA-1:cds;Parent=Msa0927990-mRNA-1 |
| chr6_2 | CDS | 72722521 | 72722657 | 72722521 | ID=Msa0927990-mRNA-1:cds;Parent=Msa0927990-mRNA-1 |
| chr6_2 | CDS | 72722274 | 72722420 | 72722274 | ID=Msa0927990-mRNA-1:cds;Parent=Msa0927990-mRNA-1 |
| chr6_2 | CDS | 72720699 | 72721385 | 72720699 | ID=Msa0927990-mRNA-1:cds;Parent=Msa0927990-mRNA-1 |
| chr6_2 | three_prime_UTR | 72720585 | 72720698 | 72720585 | ID=Msa0927990-mRNA-1:three_prime_utr;Parent=Msa0927990-mRNA-1 |
| Gene Sequence |
| Protein sequence |
