AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0791320

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0791320 MtrunA17_Chr3g0125181 92.877 702 50 0 1 702 119 820 0.0 1323
Msa0791320 MtrunA17_Chr8g0381281 25.000 208 101 3 416 617 211 369 1.86e-15 79.3
Msa0791320 MtrunA17_Chr1g0162961 29.046 241 141 12 399 616 60 293 7.05e-14 74.3
Msa0791320 MtrunA17_Chr4g0059031 26.054 261 167 9 413 653 398 652 2.92e-11 67.0
Msa0791320 MtrunA17_Chr4g0059031 28.022 182 106 7 413 578 56 228 4.01e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0791320 AT1G21651.1 41.725 719 376 14 1 699 112 807 9.54e-171 509
Msa0791320 AT1G21650.3 41.504 718 375 14 1 697 112 805 2.34e-161 509
Msa0791320 AT1G24530.1 23.554 242 125 4 388 618 161 353 4.62e-16 81.6
Msa0791320 AT4G02730.1 24.138 319 200 10 405 700 31 330 5.11e-15 77.4
Msa0791320 AT1G49450.1 26.259 278 164 10 418 659 135 407 4.38e-14 75.9
Msa0791320 AT5G16750.1 25.385 260 170 9 413 653 397 651 2.65e-13 73.9
Msa0791320 AT5G49200.1 23.746 299 179 8 406 658 120 415 3.74e-13 72.4
Msa0791320 AT5G50120.1 26.688 311 178 15 336 617 94 383 6.86e-13 71.6
Msa0791320 AT1G47610.1 22.881 354 211 11 398 700 5 347 7.70e-13 70.9
Msa0791320 AT3G18950.1 25.076 331 194 12 418 700 139 463 4.29e-12 69.3
Msa0791320 AT2G26490.1 23.926 326 198 12 418 699 97 416 8.59e-12 68.6
Msa0791320 AT1G24130.1 20.736 299 153 10 336 617 123 354 4.91e-11 65.9
Msa0791320 AT1G49040.1 23.077 247 173 6 413 653 895 1130 9.56e-11 65.9

Find 214 sgRNAs with CRISPR-Local

Find 609 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTAGGTTGTGTAGGGTTTA+TGG 0.185675 5_3:+2242001 Msa0791320:CDS
ATCCATTCCTTGACTGCTTT+TGG 0.186386 5_3:+2246321 Msa0791320:CDS
CACCCTGTAGAGGCATAATT+TGG 0.200463 5_3:-2249872 None:intergenic
TTTCGGCTAGTTATATTTCT+TGG 0.223347 5_3:+2242584 Msa0791320:CDS
GGTTTGGTTGCTGGATGTTT+GGG 0.259544 5_3:+2242208 Msa0791320:CDS
AGGTTTGGTTGCTGGATGTT+TGG 0.261871 5_3:+2242207 Msa0791320:CDS
AGCAGTGATTGCTTTGAATT+TGG 0.265522 5_3:+2242183 Msa0791320:CDS
TGCTTTGAATTTGGAAGGTT+TGG 0.270758 5_3:+2242192 Msa0791320:CDS
CTATGAGTCTGCAGGGAAAA+TGG 0.273135 5_3:+2247218 Msa0791320:CDS
TACTGCCAGTAGGGATTTGC+TGG 0.273597 5_3:+2246967 Msa0791320:CDS
GGAAAACTTTATATTGGATA+TGG 0.275046 5_3:+2248371 Msa0791320:CDS
TCTCATTTACACACATTTAG+AGG 0.288418 5_3:+2246135 Msa0791320:CDS
GGCACCATTATGCAATGTTT+TGG 0.291144 5_3:-2247188 None:intergenic
TGTTGGTGGTAGTCTGTATT+TGG 0.292580 5_3:+2242039 Msa0791320:CDS
GTAGGTTGTGTAGGGTTTAT+GGG 0.309934 5_3:+2242002 Msa0791320:CDS
ATTGAATTGTAGGAATTATC+AGG 0.322957 5_3:+2248269 Msa0791320:intron
TGGATTGGATTATCTACATC+TGG 0.331507 5_3:-2249852 None:intergenic
GTGTTGCTGCGGGTTCTTAT+TGG 0.336950 5_3:+2242508 Msa0791320:CDS
AATTTGGAAGGTTTGGTTGC+TGG 0.338083 5_3:+2242199 Msa0791320:CDS
AGCCAAGGAAAACTTTATAT+TGG 0.340396 5_3:+2248365 Msa0791320:CDS
TCTAAAGGTAGGGTTTGTTT+TGG 0.348131 5_3:+2241815 Msa0791320:CDS
GTCAAGATCCCTTGAGGAAA+TGG 0.354823 5_3:+2246268 Msa0791320:CDS
AGGGATTGGTCTTGATGTTT+CGG 0.356607 5_3:+2242567 Msa0791320:CDS
TCCACACTCTGAAGAATATC+AGG 0.359236 5_3:-2242910 None:intergenic
GCAGACTCTTTGCCAGTGTC+TGG 0.361749 5_3:+2242666 Msa0791320:CDS
ATCAATGTGTACGGAATGTT+TGG 0.362479 5_3:+2242354 Msa0791320:CDS
ATTCGGAGCTTACGGTAAAT+AGG 0.369181 5_3:+2242779 Msa0791320:CDS
GGATGTAAGGAAATCCATTC+AGG 0.371810 5_3:+2242720 Msa0791320:CDS
GAACTGACCGTCAACGCATT+TGG 0.372554 5_3:+2248302 Msa0791320:CDS
GTGCTAGGGGAAGATCTTCC+TGG 0.379218 5_3:+2246920 Msa0791320:CDS
TGTCCGTGTATGGTCCTTGC+AGG 0.380459 5_3:+2245204 Msa0791320:CDS
GCCGAGAGAACACGAATTGC+AGG 0.382095 5_3:+2242867 Msa0791320:CDS
TGTGTAGGGTTTATGGGTTG+TGG 0.384472 5_3:+2242008 Msa0791320:CDS
GTGGCGGAGGCATATTTGTC+TGG 0.388048 5_3:+2246226 Msa0791320:CDS
TTCGGCTAGTTATATTTCTT+GGG 0.389745 5_3:+2242585 Msa0791320:CDS
ATATGGTGACAAGTCTATTA+AGG 0.392939 5_3:+2248388 Msa0791320:CDS
GCCTGCAATTCGTGTTCTCT+CGG 0.394402 5_3:-2242868 None:intergenic
TGCTTGGGTTATCAAGTGTT+TGG 0.394980 5_3:+2241916 Msa0791320:CDS
ATGCTCGGCTTCCAGAGTTC+TGG 0.395107 5_3:+2249812 Msa0791320:three_prime_UTR
TTGGGTTTGGCTCGGATGTA+TGG 0.396764 5_3:+2242473 Msa0791320:CDS
TCGAGATATCCAATTGGGTT+TGG 0.397930 5_3:+2242460 Msa0791320:CDS
TAAGTTTAGTTATGTTGCTT+GGG 0.409974 5_3:+2241901 Msa0791320:CDS
GAGGCAATGTGGTAGGGTAT+TGG 0.412523 5_3:+2242069 Msa0791320:CDS
AACATGGTGGATTGATGAAC+GGG 0.412793 5_3:+2242095 Msa0791320:CDS
TTAAACTTCGAATCGGTAAC+CGG 0.413735 5_3:-2241881 None:intergenic
AAAGAGTCTGCTTAAGTGAT+AGG 0.421049 5_3:-2242654 None:intergenic
CTCGAGCAACTGACACAACT+TGG 0.421434 5_3:-2242830 None:intergenic
TTGATAAAACTGTCCGTGTA+TGG 0.421746 5_3:+2245194 Msa0791320:CDS
TTAAGTTTAGTTATGTTGCT+TGG 0.425056 5_3:+2241900 Msa0791320:CDS
AATCCAAATTATGCCTCTAC+AGG 0.428267 5_3:+2249869 Msa0791320:three_prime_UTR
GGGTTGTGGAGTGAGGTTGT+TGG 0.429200 5_3:+2242022 Msa0791320:CDS
TTGAATGAGGTTGTGAGGGA+AGG 0.432983 5_3:+2241944 Msa0791320:CDS
TCCGATCATTACTTTGTCTC+CGG 0.434979 5_3:+2241862 Msa0791320:CDS
TTTGGGTGATTCGGAGCTTA+CGG 0.438196 5_3:+2242771 Msa0791320:CDS
CATAGCTGTCACAACAGAAC+TGG 0.438524 5_3:-2248336 None:intergenic
GGCCATCTTGGTTGTATCAC+TGG 0.438571 5_3:+2243000 Msa0791320:CDS
AGGTTCTTTACAGTGGTAGT+TGG 0.439248 5_3:+2246849 Msa0791320:CDS
GGGAAGGAAGCTTATGGATC+AGG 0.443648 5_3:+2242297 Msa0791320:CDS
AAGAAGGATTGGCGCTTTAG+TGG 0.447402 5_3:+2246297 Msa0791320:CDS
TGGAGAGACGAAGTCTATCC+TGG 0.452252 5_3:+2246940 Msa0791320:CDS
GTTTGAAATTGGATAAAGAT+GGG 0.452335 5_3:+2242122 Msa0791320:CDS
GGTTTATGGGTTGTGGAGTG+AGG 0.452663 5_3:+2242015 Msa0791320:CDS
CTCAAGGGATCTTGACTAAG+AGG 0.453735 5_3:-2246261 None:intergenic
ATATGAGAATGGTTGCATAA+AGG 0.454174 5_3:+2246997 Msa0791320:CDS
AGGATAGACTTCGTCTCTCC+AGG 0.454828 5_3:-2246938 None:intergenic
GAGGTTGTGAGGGAAGGGTT+AGG 0.454933 5_3:+2241950 Msa0791320:CDS
AAAGATCTGCAAGGCCATCT+TGG 0.455347 5_3:+2242988 Msa0791320:CDS
TGGGTTATCAAGTGTTTGGA+GGG 0.455368 5_3:+2241920 Msa0791320:CDS
TGTAGAGGCATAATTTGGAT+TGG 0.457218 5_3:-2249867 None:intergenic
ACACAACTTGGCAAGAATTA+CGG 0.457396 5_3:-2242818 None:intergenic
GGTTCTTTACAGTGGTAGTT+GGG 0.460743 5_3:+2246850 Msa0791320:CDS
TATCTCGAATCCCCGCTCTC+TGG 0.461547 5_3:-2242445 None:intergenic
GGGTTTGTATATAACTTGAC+AGG 0.463388 5_3:+2249946 Msa0791320:three_prime_UTR
GTTGGCTTGTGTGTTGCTGC+GGG 0.465340 5_3:+2242498 Msa0791320:CDS
GTTCAGATGTTGTGGATGTA+AGG 0.466066 5_3:+2242707 Msa0791320:CDS
AGTTCCAAAACATTGCATAA+TGG 0.466755 5_3:+2247184 Msa0791320:CDS
TGAATGAGGTTGTGAGGGAA+GGG 0.467852 5_3:+2241945 Msa0791320:CDS
GTTGCTCGAGGAAAGTTCTA+AGG 0.468259 5_3:+2242843 Msa0791320:CDS
TTTGACTAACAAATCCTGAA+TGG 0.470928 5_3:-2242734 None:intergenic
TGAGGCAGAGTAGGTTGTGT+AGG 0.471499 5_3:+2241993 Msa0791320:CDS
GGTGATGGGAAGGAAGCTTA+TGG 0.476436 5_3:+2242291 Msa0791320:CDS
AATCAAAGCTTGGTCATTGA+AGG 0.476514 5_3:+2246377 Msa0791320:CDS
TTGGGTTATCAAGTGTTTGG+AGG 0.476582 5_3:+2241919 Msa0791320:CDS
GGGATTCGAGATATCCAATT+GGG 0.478487 5_3:+2242455 Msa0791320:CDS
GGTTTGAAATTGGATAAAGA+TGG 0.478959 5_3:+2242121 Msa0791320:CDS
TGCTGTATATATATGATGCT+CGG 0.479308 5_3:+2249797 Msa0791320:three_prime_UTR
ACTAAACTTAAACTTCGAAT+CGG 0.479824 5_3:-2241888 None:intergenic
ACATCCGAGCCAAACCCAAT+TGG 0.479934 5_3:-2242469 None:intergenic
TTGTGGAGTGAGGTTGTTGG+TGG 0.480798 5_3:+2242025 Msa0791320:CDS
CTGTTGATGACAGTTGTTGC+TGG 0.484018 5_3:-2249726 None:intergenic
CAGGGAAAATGGCTTTATAC+AGG 0.484074 5_3:+2247229 Msa0791320:CDS
GGATTGGATTATCTACATCT+GGG 0.485007 5_3:-2249851 None:intergenic
TTAATTCGAGTTCTAAAGGT+AGG 0.485679 5_3:+2241804 Msa0791320:CDS
ATGGCTTTATACAGGAGGTT+GGG 0.489479 5_3:+2247237 Msa0791320:CDS
AGGTTTAATTCGAGTTCTAA+AGG 0.490463 5_3:+2241800 Msa0791320:CDS
CATAGCCCGTTGGTGGTGCT+AGG 0.491856 5_3:+2246905 Msa0791320:CDS
TTCTCATACCATTTCCTCAA+GGG 0.493596 5_3:-2246276 None:intergenic
GAGGAAATGGTATGAGAAGA+AGG 0.496326 5_3:+2246281 Msa0791320:CDS
CTTTACAGTGGTAGTTGGGA+TGG 0.497299 5_3:+2246854 Msa0791320:CDS
CTGGTTGCAGCATATGAGAA+TGG 0.500700 5_3:+2246986 Msa0791320:CDS
TATTGATTTGAATGAGGTGT+TGG 0.500765 5_3:+2242270 Msa0791320:CDS
GTGATTGCTTTGAATTTGGA+AGG 0.501498 5_3:+2242187 Msa0791320:CDS
AATCTTCTCTACACTGGAAG+TGG 0.502004 5_3:+2246345 Msa0791320:CDS
CCTGGCTATTACTGCCAGTA+GGG 0.502384 5_3:+2246958 Msa0791320:CDS
GTACACATTGATTCGTGTGA+TGG 0.504322 5_3:-2242343 None:intergenic
TTGTGAATCAACCAGAACTC+TGG 0.505544 5_3:-2249823 None:intergenic
AATGGATCCAAATGCGTTGA+CGG 0.506874 5_3:-2248309 None:intergenic
CCCTACTGGCAGTAATAGCC+AGG 0.507582 5_3:-2246958 None:intergenic
GGTTTGTATTGATTTGAATG+AGG 0.508437 5_3:+2242264 Msa0791320:CDS
TGGCTCGGATGTATGGTCGT+TGG 0.509247 5_3:+2242480 Msa0791320:CDS
AAGCTTCTGTGAGGCAGAGT+AGG 0.512120 5_3:+2241984 Msa0791320:CDS
AATGGCTTTATACAGGAGGT+TGG 0.513077 5_3:+2247236 Msa0791320:CDS
GAGGCAGAGTAGGTTGTGTA+GGG 0.517876 5_3:+2241994 Msa0791320:CDS
CTTCCCCTAGCACCACCAAC+GGG 0.517966 5_3:-2246910 None:intergenic
GGATCAGGTTTCTTGTGGCA+CGG 0.518549 5_3:+2242312 Msa0791320:CDS
TTCCAAAAGCAGTCAAGGAA+TGG 0.519183 5_3:-2246323 None:intergenic
TGCAACCAGCAAATCCCTAC+TGG 0.519400 5_3:-2246972 None:intergenic
GATCAGGTTTCTTGTGGCAC+GGG 0.520966 5_3:+2242313 Msa0791320:CDS
AAGATTTCCAAAAGCAGTCA+AGG 0.523625 5_3:-2246328 None:intergenic
CCAGTGTCTGGACATCAATC+CGG 0.524842 5_3:+2242678 Msa0791320:CDS
GTGTTTGGAGGGGTTGAATG+AGG 0.527146 5_3:+2241931 Msa0791320:CDS
GGGGATTCGAGATATCCAAT+TGG 0.529169 5_3:+2242454 Msa0791320:CDS
TTGAATGAGGTGTTGGTGAT+GGG 0.530062 5_3:+2242277 Msa0791320:CDS
GTGTGGAAACTACAGATTTG+TGG 0.530478 5_3:-2246811 None:intergenic
CGTTGGCTTGTGTGTTGCTG+CGG 0.532206 5_3:+2242497 Msa0791320:CDS
TGGCGGAGGCATATTTGTCT+GGG 0.533013 5_3:+2246227 Msa0791320:CDS
TTTGGAAATCTTCTCTACAC+TGG 0.533385 5_3:+2246339 Msa0791320:CDS
GGCTAGTTATATTTCTTGGG+TGG 0.533784 5_3:+2242588 Msa0791320:CDS
AATCCCTTCACTCATTTCAA+AGG 0.535310 5_3:-2242551 None:intergenic
GGGTTGTTAATCCAGAGAGC+GGG 0.535616 5_3:+2242434 Msa0791320:CDS
CCGGATTGATGTCCAGACAC+TGG 0.535941 5_3:-2242678 None:intergenic
CTTATGGATCAGGTTTCTTG+TGG 0.536122 5_3:+2242307 Msa0791320:CDS
ATAGCCCGTTGGTGGTGCTA+GGG 0.537282 5_3:+2246906 Msa0791320:CDS
GAGATAGAACAATCAAAGCT+TGG 0.538440 5_3:+2246367 Msa0791320:CDS
TCCGTTACTGAGGACGGTGT+TGG 0.539166 5_3:+2241776 Msa0791320:CDS
TTTGAATGAGGTGTTGGTGA+TGG 0.540538 5_3:+2242276 Msa0791320:CDS
TTATTGGAAACAAACTCCCT+CGG 0.544021 5_3:+2242524 Msa0791320:CDS
CACAACAGAACTGGAAGGAA+TGG 0.544135 5_3:-2248327 None:intergenic
TAATGATCATAGCCCGTTGG+TGG 0.549458 5_3:+2246898 Msa0791320:CDS
GGGATGGAACCGTTCGATTG+TGG 0.551322 5_3:+2246870 Msa0791320:CDS
ATTACCTTTGAAATGAGTGA+AGG 0.551791 5_3:+2242547 Msa0791320:CDS
GAATTGCAGGCAAAAGAAGA+TGG 0.552427 5_3:+2242880 Msa0791320:CDS
TAATTCGAGTTCTAAAGGTA+GGG 0.553340 5_3:+2241805 Msa0791320:CDS
GGAAAATCGTTCAGATGTTG+TGG 0.559321 5_3:+2242699 Msa0791320:CDS
TCTTCCCCTAGCACCACCAA+CGG 0.560717 5_3:-2246911 None:intergenic
ATATCCAATTGGGTTTGGCT+CGG 0.563450 5_3:+2242465 Msa0791320:CDS
CTCATCACATACTGAAAGTG+TGG 0.564117 5_3:-2246828 None:intergenic
TTCACTGCTAGCTTATCTAA+AGG 0.564158 5_3:+2242952 Msa0791320:CDS
ACCGTCCTCAGTAACGGAAA+CGG 0.564364 5_3:-2241771 None:intergenic
GAAGAACAATTGTGTATAAG+TGG 0.564435 5_3:+2246198 Msa0791320:CDS
ATAAGTGGTGACAGTGGCGG+AGG 0.564813 5_3:+2246213 Msa0791320:CDS
CTCATTTCAAAGGTAATCCG+AGG 0.565802 5_3:-2242541 None:intergenic
CTTCTCATACCATTTCCTCA+AGG 0.569129 5_3:-2246277 None:intergenic
ACCGTTTCCGTTACTGAGGA+CGG 0.569688 5_3:+2241770 Msa0791320:CDS
TTTGAAATGAGTGAAGGGAT+TGG 0.571973 5_3:+2242553 Msa0791320:CDS
ATTTAGAAGTGTTACCTGCA+AGG 0.577116 5_3:-2245218 None:intergenic
GTGTGAGAGGCAATGTGGTA+GGG 0.577329 5_3:+2242063 Msa0791320:CDS
TTACCTTTGAAATGAGTGAA+GGG 0.578480 5_3:+2242548 Msa0791320:CDS
TGTGTGAGAGGCAATGTGGT+AGG 0.580383 5_3:+2242062 Msa0791320:CDS
AATGGTATGAGAAGAAGGAT+TGG 0.581367 5_3:+2246286 Msa0791320:CDS
ATCACACGAATCAATGTGTA+CGG 0.581620 5_3:+2242345 Msa0791320:CDS
GATTGGATTATCTACATCTG+GGG 0.583263 5_3:-2249850 None:intergenic
TGTATCACTGGATTAGCTGT+AGG 0.584576 5_3:+2243012 Msa0791320:CDS
ACCAACACCGTCCTCAGTAA+CGG 0.586298 5_3:-2241777 None:intergenic
GTAACGGAAACGGTGTCGTG+TGG 0.588599 5_3:-2241761 None:intergenic
GTCTGTATTTGGTGTGTGAG+AGG 0.588608 5_3:+2242050 Msa0791320:CDS
CACACTTTCAGTATGTGATG+AGG 0.590444 5_3:+2246829 Msa0791320:CDS
GGGGTTGAATGAGGTTGTGA+GGG 0.592486 5_3:+2241940 Msa0791320:CDS
TTACTGAGGACGGTGTTGGT+AGG 0.594029 5_3:+2241780 Msa0791320:CDS
ACAGCTATGTTATGCAGCCA+AGG 0.594851 5_3:+2248350 Msa0791320:CDS
ACCTGATATTCTTCAGAGTG+TGG 0.595935 5_3:+2242909 Msa0791320:CDS
ACCGGAGACAAAGTAATGAT+CGG 0.598232 5_3:-2241863 None:intergenic
GGGTTATCAAGTGTTTGGAG+GGG 0.599842 5_3:+2241921 Msa0791320:CDS
ATCCAGTGATACAACCAAGA+TGG 0.600852 5_3:-2243002 None:intergenic
AGGGGTTGAATGAGGTTGTG+AGG 0.608706 5_3:+2241939 Msa0791320:CDS
GCGGAGGCATATTTGTCTGG+GGG 0.609138 5_3:+2246229 Msa0791320:CDS
GGCGGAGGCATATTTGTCTG+GGG 0.611922 5_3:+2246228 Msa0791320:CDS
TAGCCCGTTGGTGGTGCTAG+GGG 0.612914 5_3:+2246907 Msa0791320:CDS
CAAGTTGTGTCAGTTGCTCG+AGG 0.613023 5_3:+2242831 Msa0791320:CDS
ACTTTGATGTGCACAATGGA+TGG 0.613868 5_3:+2246788 Msa0791320:CDS
ATCACTGGATTAGCTGTAGG+AGG 0.617065 5_3:+2243015 Msa0791320:CDS
ATGAGGTGTTGGTGATGGGA+AGG 0.622981 5_3:+2242281 Msa0791320:CDS
GATGATAACCTGGCAAGACA+AGG 0.623890 5_3:-2250019 None:intergenic
AAACATGGTGGATTGATGAA+CGG 0.625588 5_3:+2242094 Msa0791320:CDS
GGAAAATGGCTTTATACAGG+AGG 0.630205 5_3:+2247232 Msa0791320:CDS
TCCTGGCTATTACTGCCAGT+AGG 0.632029 5_3:+2246957 Msa0791320:CDS
ATTGGATTATCTACATCTGG+GGG 0.632210 5_3:-2249849 None:intergenic
ATGTACAGAACACCCTGTAG+AGG 0.633211 5_3:-2249882 None:intergenic
CTCTTAGTCAAGATCCCTTG+AGG 0.633330 5_3:+2246262 Msa0791320:CDS
AGGTCATGAGAATAAAGTCA+TGG 0.635591 5_3:+2246155 Msa0791320:CDS
TGTGATGAGGTTCTTTACAG+TGG 0.644038 5_3:+2246842 Msa0791320:CDS
ATCCAAATTATGCCTCTACA+GGG 0.644079 5_3:+2249870 Msa0791320:three_prime_UTR
AGGGTATTGGAGAAACATGG+TGG 0.645952 5_3:+2242082 Msa0791320:CDS
GGTAGGGTATTGGAGAAACA+TGG 0.648011 5_3:+2242079 Msa0791320:CDS
AAAACTTAGACAAAACCTCA+GGG 0.648737 5_3:-2242402 None:intergenic
GGTTGTTAATCCAGAGAGCG+GGG 0.649343 5_3:+2242435 Msa0791320:CDS
TTACCTGCAAGGACCATACA+CGG 0.655657 5_3:-2245207 None:intergenic
TTGGTGTGTGAGAGGCAATG+TGG 0.657631 5_3:+2242058 Msa0791320:CDS
TCTTAATGATCATAGCCCGT+TGG 0.661187 5_3:+2246895 Msa0791320:CDS
AGGGTTGTTAATCCAGAGAG+CGG 0.668851 5_3:+2242433 Msa0791320:CDS
ATTAAGACTCCACAATCGAA+CGG 0.668888 5_3:-2246879 None:intergenic
TCATTTCAAAGGTAATCCGA+GGG 0.677675 5_3:-2242540 None:intergenic
GCTGTCACAACAGAACTGGA+AGG 0.680632 5_3:-2248332 None:intergenic
ATTGAGCTTAAAGATCTGCA+AGG 0.682677 5_3:+2242979 Msa0791320:CDS
TGGAACTTTGATGTGCACAA+TGG 0.684155 5_3:+2246784 Msa0791320:CDS
TTGCAGGCAAAAGAAGATGG+TGG 0.685113 5_3:+2242883 Msa0791320:CDS
CGACACCGTTTCCGTTACTG+AGG 0.695351 5_3:+2241766 Msa0791320:CDS
TCGGAGTTAAACTCACCGTA+CGG 0.695373 5_3:-2241844 None:intergenic
TGTATAAGTGGTGACAGTGG+CGG 0.716166 5_3:+2246210 Msa0791320:CDS
ACGGTAAATAGGAACAACAC+AGG 0.719876 5_3:+2242790 Msa0791320:CDS
TGATTCTAGAAGCTTCTGTG+AGG 0.720899 5_3:+2241975 Msa0791320:CDS
TTGTGTATAAGTGGTGACAG+TGG 0.731739 5_3:+2246207 Msa0791320:CDS
ACATGGTGGATTGATGAACG+GGG 0.733902 5_3:+2242096 Msa0791320:CDS
CATGGTGGATTGATGAACGG+GGG 0.743106 5_3:+2242097 Msa0791320:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTGTGATAATTTTTATAA+TGG + chr5_3:2244415-2244434 Msa0791320:intron 10.0%
!!! TCCATTTTATTTTAATAAAT+AGG + chr5_3:2245594-2245613 Msa0791320:intron 10.0%
!! TCCTATTTATTAAAATAAAA+TGG - chr5_3:2245598-2245617 None:intergenic 10.0%
!!! TCTTAATTTTTAAAAGAAAA+AGG - chr5_3:2245764-2245783 None:intergenic 10.0%
!! TAAGATCAAAATATATTATT+TGG - chr5_3:2247606-2247625 None:intergenic 10.0%
!! TTATATATTAAAAGCTTAAT+AGG + chr5_3:2248885-2248904 Msa0791320:intron 10.0%
!!! TTTTTTTTTTAACTACAAAG+AGG + chr5_3:2243300-2243319 Msa0791320:intron 15.0%
!!! TTTTTTTTTAACTACAAAGA+GGG + chr5_3:2243301-2243320 Msa0791320:intron 15.0%
!! TAAGTCAAATATTAAGTAAA+GGG - chr5_3:2243872-2243891 None:intergenic 15.0%
!! TTAAGTCAAATATTAAGTAA+AGG - chr5_3:2243873-2243892 None:intergenic 15.0%
!! ATTATCACAATTTATTATCA+TGG - chr5_3:2244407-2244426 None:intergenic 15.0%
!!! TTGTTTACATTTATTTTTGA+AGG - chr5_3:2245790-2245809 None:intergenic 15.0%
!!! TGATTTTGACAATTTTTTTT+TGG + chr5_3:2246008-2246027 Msa0791320:intron 15.0%
!! AAAAATAAAAAAACTGAAAG+TGG - chr5_3:2246536-2246555 None:intergenic 15.0%
!! AAAAATTAAAAAACTGAAAG+TGG + chr5_3:2246633-2246652 Msa0791320:intron 15.0%
!!! AATATTTTGAAATCATCTTA+GGG - chr5_3:2247502-2247521 None:intergenic 15.0%
!! TATTATCAATTTATCATGAT+TGG - chr5_3:2248052-2248071 None:intergenic 15.0%
!! TAATTATATCTATTATCTTG+AGG - chr5_3:2248164-2248183 None:intergenic 15.0%
!! TAAATAATAAATACTTACGA+AGG + chr5_3:2248763-2248782 Msa0791320:intron 15.0%
!! AAATAATAAATACTTACGAA+GGG + chr5_3:2248764-2248783 Msa0791320:intron 15.0%
!!! GTTTCAAATATTTCTTTTTT+CGG - chr5_3:2249413-2249432 None:intergenic 15.0%
!!! TTTGTTTTGGAAGAAAAAAT+TGG + chr5_3:2242622-2242641 Msa0791320:CDS 20.0%
!!! TACTTAACACTATATTTTCA+AGG + chr5_3:2243123-2243142 Msa0791320:intron 20.0%
!! TCTCATAATACATCAAAATT+TGG + chr5_3:2243405-2243424 Msa0791320:intron 20.0%
!! CAAAACGACTAATAATAAAA+TGG - chr5_3:2244073-2244092 None:intergenic 20.0%
!! AAAGAAGAAAGAGTAATATA+TGG + chr5_3:2244208-2244227 Msa0791320:intron 20.0%
!! AAAGAGTAATATATGGTAAA+GGG + chr5_3:2244215-2244234 Msa0791320:intron 20.0%
!!! AAATAATTTGTTTCTTTTGC+TGG - chr5_3:2244459-2244478 None:intergenic 20.0%
!! TTGTTAAAGCTTCATAAAAT+GGG + chr5_3:2244546-2244565 Msa0791320:intron 20.0%
!!! TGTCATTGAATTCAAATTTT+GGG - chr5_3:2245850-2245869 None:intergenic 20.0%
!!! TTGTCATTGAATTCAAATTT+TGG - chr5_3:2245851-2245870 None:intergenic 20.0%
!! TTATGTCAATAATTCTCATA+GGG - chr5_3:2246508-2246527 None:intergenic 20.0%
!! TTTATGTCAATAATTCTCAT+AGG - chr5_3:2246509-2246528 None:intergenic 20.0%
!!! TTTTTATTTTTGTCATGTAG+TGG + chr5_3:2246552-2246571 Msa0791320:intron 20.0%
!! TTTATGTCAATAATTGTCAT+AGG + chr5_3:2246660-2246679 Msa0791320:intron 20.0%
!! TTATGTCAATAATTGTCATA+GGG + chr5_3:2246661-2246680 Msa0791320:intron 20.0%
!!! CAACTCATTAATCTTTTAAA+GGG - chr5_3:2247051-2247070 None:intergenic 20.0%
!!! ACAACTCATTAATCTTTTAA+AGG - chr5_3:2247052-2247071 None:intergenic 20.0%
!! AAGTGTATTTCATTTCAAAT+GGG - chr5_3:2247077-2247096 None:intergenic 20.0%
!!! CAATATTTTGAAATCATCTT+AGG - chr5_3:2247503-2247522 None:intergenic 20.0%
!!! AGACTTTTAAATTATGAATG+TGG + chr5_3:2247941-2247960 Msa0791320:intron 20.0%
!!! TTATGGATTAGAGTAAATTA+GGG - chr5_3:2248016-2248035 None:intergenic 20.0%
!!! ATTATGGATTAGAGTAAATT+AGG - chr5_3:2248017-2248036 None:intergenic 20.0%
!! ACTCTAATCCATAATTAAAT+AGG + chr5_3:2248022-2248041 Msa0791320:intron 20.0%
!! CTCTAATCCATAATTAAATA+GGG + chr5_3:2248023-2248042 Msa0791320:intron 20.0%
!!! TAAAAAGAGTATTGAATTGT+AGG + chr5_3:2248259-2248278 Msa0791320:intron 20.0%
!!! TGTAAAATAGGCTTTTAAAT+AGG - chr5_3:2248660-2248679 None:intergenic 20.0%
!! TAAAGCCTATTTACTTAAAT+AGG - chr5_3:2248956-2248975 None:intergenic 20.0%
!!! ATTTTTAAAACAAGACAGAT+TGG + chr5_3:2249139-2249158 Msa0791320:intron 20.0%
!!! GATTTTTCATTCAACAATAT+AGG - chr5_3:2249341-2249360 None:intergenic 20.0%
!!! AACAACTGATATTTTCTTTT+TGG + chr5_3:2249909-2249928 Msa0791320:three_prime_UTR 20.0%
!!! ACAACTGATATTTTCTTTTT+GGG + chr5_3:2249910-2249929 Msa0791320:three_prime_UTR 20.0%
! ACTAAACTTAAACTTCGAAT+CGG - chr5_3:2241891-2241910 None:intergenic 25.0%
! TTAAGTTTAGTTATGTTGCT+TGG + chr5_3:2241900-2241919 Msa0791320:CDS 25.0%
!! TAAGTTTAGTTATGTTGCTT+GGG + chr5_3:2241901-2241920 Msa0791320:CDS 25.0%
!! GTTTGAAATTGGATAAAGAT+GGG + chr5_3:2242122-2242141 Msa0791320:CDS 25.0%
!!! AAAGATGGGTTTTTTAGTTT+TGG + chr5_3:2242136-2242155 Msa0791320:CDS 25.0%
!! AAACACCAATTTGTGTTTTT+GGG + chr5_3:2242754-2242773 Msa0791320:CDS 25.0%
!!! ATTTCCATTTGTTATCAAAG+AGG + chr5_3:2243161-2243180 Msa0791320:intron 25.0%
! TCTTCAATTGAGTGATAAAT+AGG + chr5_3:2243200-2243219 Msa0791320:intron 25.0%
! TTAAATGCAACCTATATACT+AGG + chr5_3:2243459-2243478 Msa0791320:intron 25.0%
!! AAGATGATAGAGAAGATTTT+AGG - chr5_3:2244948-2244967 None:intergenic 25.0%
! TATTAAGTAAAGGGAAACTT+GGG - chr5_3:2243863-2243882 None:intergenic 25.0%
! ATATTAAGTAAAGGGAAACT+TGG - chr5_3:2243864-2243883 None:intergenic 25.0%
!! AACTTGCTTATATCTTGAAA+GGG + chr5_3:2243900-2243919 Msa0791320:intron 25.0%
!! TCTTGAAATCTAAAACTGAT+TGG + chr5_3:2244010-2244029 Msa0791320:intron 25.0%
!! TAATAATAAAATGGTGGTGA+CGG - chr5_3:2244064-2244083 None:intergenic 25.0%
! AACGACTAATAATAAAATGG+TGG - chr5_3:2244070-2244089 None:intergenic 25.0%
! GAAAGAGTAATATATGGTAA+AGG + chr5_3:2244214-2244233 Msa0791320:intron 25.0%
! TATTATCATGGATTCAATCA+CGG - chr5_3:2244395-2244414 None:intergenic 25.0%
! GGTATATATAGAAAAGAAAG+CGG - chr5_3:2244500-2244519 None:intergenic 25.0%
!! GCTTTCTTTTCTATATATAC+CGG + chr5_3:2244499-2244518 Msa0791320:intron 25.0%
! CTTGTTAAAGCTTCATAAAA+TGG + chr5_3:2244545-2244564 Msa0791320:intron 25.0%
!!! AGTGGATTTTAAATTTGATG+GGG - chr5_3:2244766-2244785 None:intergenic 25.0%
!!! CAGTGGATTTTAAATTTGAT+GGG - chr5_3:2244767-2244786 None:intergenic 25.0%
!! AACTTGCTTATATCTTGAAA+GGG - chr5_3:2243900-2243919 None:intergenic 25.0%
!! AAGATGATAGAGAAGATTTT+AGG + chr5_3:2244948-2244967 Msa0791320:intron 25.0%
!! AATCATTTGTTTAGTTTCAC+AGG + chr5_3:2245148-2245167 Msa0791320:intron 25.0%
!! ATCATTTGTTTAGTTTCACA+GGG + chr5_3:2245149-2245168 Msa0791320:intron 25.0%
! TTACTTTGCTAACATTCTAT+TGG + chr5_3:2245246-2245265 Msa0791320:intron 25.0%
! TACTTTGCTAACATTCTATT+GGG + chr5_3:2245247-2245266 Msa0791320:intron 25.0%
! TTTCCAGTAAATAGTTATTC+AGG + chr5_3:2245369-2245388 Msa0791320:intron 25.0%
! AAACCTGAATAACTATTTAC+TGG - chr5_3:2245375-2245394 None:intergenic 25.0%
! ACCAATAAATAAGAAATGAG+AGG + chr5_3:2245680-2245699 Msa0791320:intron 25.0%
!! TCCTCTCATTTCTTATTTAT+TGG - chr5_3:2245684-2245703 None:intergenic 25.0%
! AAAAGTAAATGCACATTTGA+GGG - chr5_3:2245892-2245911 None:intergenic 25.0%
!! ATTGTCAAAATCATGTTTTG+AGG - chr5_3:2246001-2246020 None:intergenic 25.0%
!!! GTCAGAAATGGAATTTTTTT+TGG - chr5_3:2246685-2246704 None:intergenic 25.0%
! TATGTCAATAATTCTCATAG+GGG - chr5_3:2246507-2246526 None:intergenic 25.0%
! TATGTCAATAATTGTCATAG+GGG + chr5_3:2246662-2246681 Msa0791320:intron 25.0%
!!! GTCAGAAATGGAATTTTTTT+TGG + chr5_3:2246685-2246704 Msa0791320:intron 25.0%
!!! TCATTAATCTTTTAAAGGGA+AGG - chr5_3:2247047-2247066 None:intergenic 25.0%
! CAAGTGTATTTCATTTCAAA+TGG - chr5_3:2247078-2247097 None:intergenic 25.0%
! GGACAAAAATGTTAATATAC+AGG + chr5_3:2247258-2247277 Msa0791320:CDS 25.0%
! ATTATGATTGTTGAAGTTAC+AGG + chr5_3:2247390-2247409 Msa0791320:intron 25.0%
! TTATGATTGTTGAAGTTACA+GGG + chr5_3:2247414-2247433 Msa0791320:intron 25.0%
!!! TATTAGCTTACTTTAGCTTT+AGG - chr5_3:2247556-2247575 None:intergenic 25.0%
!! TTTTGATCTTAAGATCGATA+AGG + chr5_3:2247615-2247634 Msa0791320:intron 25.0%
! ACAATACTAAATTGAGATGA+TGG + chr5_3:2247661-2247680 Msa0791320:intron 25.0%
!! TTTAGTAGAGTTTCAGATTT+TGG + chr5_3:2247817-2247836 Msa0791320:intron 25.0%
!! TTAGTAGAGTTTCAGATTTT+GGG + chr5_3:2247818-2247837 Msa0791320:intron 25.0%
! TTATCAGGATTTGCATAAAT+AGG + chr5_3:2247903-2247922 Msa0791320:intron 25.0%
! TTGGTTTCCCTATTTAATTA+TGG - chr5_3:2248033-2248052 None:intergenic 25.0%
! AGAATGGTTTCAATATTTCT+TGG - chr5_3:2248076-2248095 None:intergenic 25.0%
! CTTATACAATCTCTTAAGAA+TGG - chr5_3:2248092-2248111 None:intergenic 25.0%
! ATTGAATTGTAGGAATTATC+AGG + chr5_3:2248269-2248288 Msa0791320:intron 25.0%
!! ATCCAATATAAAGTTTTCCT+TGG - chr5_3:2248370-2248389 None:intergenic 25.0%
! GGAAAACTTTATATTGGATA+TGG + chr5_3:2248371-2248390 Msa0791320:CDS 25.0%
! CTAGTATAATTGAAAGAAGT+AGG - chr5_3:2248417-2248436 None:intergenic 25.0%
! TTATACTAGTTGTTAAACTG+TGG + chr5_3:2248428-2248447 Msa0791320:intron 25.0%
!! TAAAAGCCTATTTTACACTA+AGG + chr5_3:2248663-2248682 Msa0791320:intron 25.0%
!! AAGTCATATTTGTGTGTTTT+AGG - chr5_3:2248739-2248758 None:intergenic 25.0%
!! TTTCATATGATTTGGCTATT+TGG - chr5_3:2248814-2248833 None:intergenic 25.0%
! ATATTAAAAGCTTAATAGGC+CGG + chr5_3:2248889-2248908 Msa0791320:intron 25.0%
! GAAAGAAAATAACATCTACA+CGG - chr5_3:2249095-2249114 None:intergenic 25.0%
!! GCATTTTCTTCTATTAAGTA+GGG - chr5_3:2249119-2249138 None:intergenic 25.0%
!! TGCATTTTCTTCTATTAAGT+AGG - chr5_3:2249120-2249139 None:intergenic 25.0%
! CTTTACAAAACAAGAGAATA+AGG - chr5_3:2249232-2249251 None:intergenic 25.0%
!! TTTTCATTCAACAATATAGG+AGG - chr5_3:2249338-2249357 None:intergenic 25.0%
!!! CTTTTTTCGGTTAACATTTA+GGG - chr5_3:2249400-2249419 None:intergenic 25.0%
!!! TCTTTTTTCGGTTAACATTT+AGG - chr5_3:2249401-2249420 None:intergenic 25.0%
! AAGTATTTACTTTACACCAT+TGG - chr5_3:2249484-2249503 None:intergenic 25.0%
! GTGTATAGATTTAAATTTGC+TGG - chr5_3:2249541-2249560 None:intergenic 25.0%
!! ATTATTAATTTGATTCCTGC+AGG + chr5_3:2249675-2249694 Msa0791320:intron 25.0%
!! CAACTGATATTTTCTTTTTG+GGG + chr5_3:2249911-2249930 Msa0791320:three_prime_UTR 25.0%
! AGGTTTAATTCGAGTTCTAA+AGG + chr5_3:2241800-2241819 Msa0791320:CDS 30.0%
!! TTAATTCGAGTTCTAAAGGT+AGG + chr5_3:2241804-2241823 Msa0791320:CDS 30.0%
!! TAATTCGAGTTCTAAAGGTA+GGG + chr5_3:2241805-2241824 Msa0791320:CDS 30.0%
! GGTTTGAAATTGGATAAAGA+TGG + chr5_3:2242121-2242140 Msa0791320:CDS 30.0%
!!! TAGTTTTGGAATGATTGCTA+AGG + chr5_3:2242150-2242169 Msa0791320:CDS 30.0%
!!! AGTTTTGGAATGATTGCTAA+GGG + chr5_3:2242151-2242170 Msa0791320:CDS 30.0%
!! GGTTTGTATTGATTTGAATG+AGG + chr5_3:2242264-2242283 Msa0791320:CDS 30.0%
!! TATTGATTTGAATGAGGTGT+TGG + chr5_3:2242270-2242289 Msa0791320:CDS 30.0%
AAAACTTAGACAAAACCTCA+GGG - chr5_3:2242405-2242424 None:intergenic 30.0%
AAAAACTTAGACAAAACCTC+AGG - chr5_3:2242406-2242425 None:intergenic 30.0%
! TGTCTAAGTTTTTGAACAAG+AGG + chr5_3:2242413-2242432 Msa0791320:CDS 30.0%
! GTCTAAGTTTTTGAACAAGA+GGG + chr5_3:2242414-2242433 Msa0791320:CDS 30.0%
!! ATTACCTTTGAAATGAGTGA+AGG + chr5_3:2242547-2242566 Msa0791320:CDS 30.0%
!! TTACCTTTGAAATGAGTGAA+GGG + chr5_3:2242548-2242567 Msa0791320:CDS 30.0%
! TTTCGGCTAGTTATATTTCT+TGG + chr5_3:2242584-2242603 Msa0791320:CDS 30.0%
! TTCGGCTAGTTATATTTCTT+GGG + chr5_3:2242585-2242604 Msa0791320:CDS 30.0%
!!! GGAGAAAGTTAGTTTTGTTT+TGG + chr5_3:2242609-2242628 Msa0791320:CDS 30.0%
TTTGACTAACAAATCCTGAA+TGG - chr5_3:2242737-2242756 None:intergenic 30.0%
! CAAACACCAATTTGTGTTTT+TGG + chr5_3:2242753-2242772 Msa0791320:CDS 30.0%
AATCACCCAAAAACACAAAT+TGG - chr5_3:2242762-2242781 None:intergenic 30.0%
!!! ATTTGTGTTTTTGGGTGATT+CGG + chr5_3:2242762-2242781 Msa0791320:CDS 30.0%
ATCAAACAACTCAATTGAGA+TGG + chr5_3:2243377-2243396 Msa0791320:intron 30.0%
TACTAATGTGCAATTTAGTG+TGG + chr5_3:2243431-2243450 Msa0791320:intron 30.0%
TAACTAAGAGCCTAGTATAT+AGG - chr5_3:2243472-2243491 None:intergenic 30.0%
CCAAATATTGTGGAATTCAA+AGG - chr5_3:2245007-2245026 None:intergenic 30.0%
CCTTTGAATTCCACAATATT+TGG + chr5_3:2243700-2243719 Msa0791320:intron 30.0%
! GAACTTGCTTATATCTTGAA+AGG + chr5_3:2243899-2243918 Msa0791320:intron 30.0%
! ATCTAAAACTGATTGGAAGA+TGG + chr5_3:2244017-2244036 Msa0791320:intron 30.0%
! TCTTGAAATCTGAAACTGAT+TGG - chr5_3:2244700-2244719 None:intergenic 30.0%
!! GCAGTGGATTTTAAATTTGA+TGG - chr5_3:2244768-2244787 None:intergenic 30.0%
! GAACTTGCTTATATCTTGAA+AGG - chr5_3:2243899-2243918 None:intergenic 30.0%
GACAGATATGGTCAAATAAT+AGG + chr5_3:2244831-2244850 Msa0791320:intron 30.0%
!! AAGATTTTAGGTGAGAGATT+CGG + chr5_3:2244960-2244979 Msa0791320:intron 30.0%
TGAATTCCACAATATTTGGT+TGG - chr5_3:2245006-2245025 None:intergenic 30.0%
CCTTTGAATTCCACAATATT+TGG - chr5_3:2243700-2243719 None:intergenic 30.0%
CCAAATATTGTGGAATTCAA+AGG + chr5_3:2245007-2245026 Msa0791320:intron 30.0%
ACTAACAAATCAAACGCAAA+TGG - chr5_3:2245094-2245113 None:intergenic 30.0%
! TCATTTGTTTAGTTTCACAG+GGG + chr5_3:2245150-2245169 Msa0791320:intron 30.0%
TAACTGAGTTCCACATAATT+TGG + chr5_3:2245545-2245564 Msa0791320:intron 30.0%
! AAAATGGATCCCACTATTTT+GGG - chr5_3:2245582-2245601 None:intergenic 30.0%
! TAAAATGGATCCCACTATTT+TGG - chr5_3:2245583-2245602 None:intergenic 30.0%
ATGAGAGGAAAATAGATGAA+TGG + chr5_3:2245695-2245714 Msa0791320:intron 30.0%
TGAGAGGAAAATAGATGAAT+GGG + chr5_3:2245696-2245715 Msa0791320:intron 30.0%
GAAAAGTAAATGCACATTTG+AGG - chr5_3:2245893-2245912 None:intergenic 30.0%
! TCTTTTGCTACAGAGTAATA+TGG + chr5_3:2246039-2246058 Msa0791320:intron 30.0%
TCTCATTTACACACATTTAG+AGG + chr5_3:2246135-2246154 Msa0791320:CDS 30.0%
GAAGAACAATTGTGTATAAG+TGG + chr5_3:2246198-2246217 Msa0791320:CDS 30.0%
! TCATTTTCTTTGTATGCACA+TGG + chr5_3:2246406-2246425 Msa0791320:intron 30.0%
!!! TGGAATTTTTTTTGGCATGA+AGG - chr5_3:2246693-2246712 None:intergenic 30.0%
ATGTCAATAATTCTCATAGG+GGG - chr5_3:2246506-2246525 None:intergenic 30.0%
!!! TTTTTATTTCTGTCCTGTAG+TGG - chr5_3:2246617-2246636 None:intergenic 30.0%
ATGTCAATAATTGTCATAGG+GGG + chr5_3:2246663-2246682 Msa0791320:intron 30.0%
!!! TGGAATTTTTTTTGGCATGA+AGG + chr5_3:2246693-2246712 Msa0791320:intron 30.0%
TCATTTCAAAGTGCATTCTT+TGG + chr5_3:2246732-2246751 Msa0791320:intron 30.0%
CATTTCAAAGTGCATTCTTT+GGG + chr5_3:2246733-2246752 Msa0791320:intron 30.0%
! TATACTCACTACATTTTTCC+AGG + chr5_3:2246760-2246779 Msa0791320:intron 30.0%
ATATGAGAATGGTTGCATAA+AGG + chr5_3:2246997-2247016 Msa0791320:CDS 30.0%
! CTTCTATTTGTTGCCTATTT+AGG + chr5_3:2247138-2247157 Msa0791320:intron 30.0%
AGTTCCAAAACATTGCATAA+TGG + chr5_3:2247184-2247203 Msa0791320:CDS 30.0%
! AATCTTTTGCGCTATGTTTT+TGG + chr5_3:2247292-2247311 Msa0791320:intron 30.0%
! ATCTTTTGCGCTATGTTTTT+GGG + chr5_3:2247293-2247312 Msa0791320:intron 30.0%
!! CTAGGATTAGTTTATCAACA+TGG - chr5_3:2247463-2247482 None:intergenic 30.0%
! CATGTTGATAAACTAATCCT+AGG + chr5_3:2247461-2247480 Msa0791320:intron 30.0%
TAATCCTAGGAGATAAACTA+AGG + chr5_3:2247474-2247493 Msa0791320:intron 30.0%
!!! GTTGTTTTTCAGTTTCAAAG+TGG - chr5_3:2247584-2247603 None:intergenic 30.0%
AGATGAGATTCTAGACATAT+TGG + chr5_3:2247684-2247703 Msa0791320:intron 30.0%
!! CAGATTTTGGGTAATTTTGT+AGG + chr5_3:2247830-2247849 Msa0791320:intron 30.0%
! GTAATTTTGTAGGAGAATAG+TGG + chr5_3:2247840-2247859 Msa0791320:intron 30.0%
AGCCAAGGAAAACTTTATAT+TGG + chr5_3:2248365-2248384 Msa0791320:CDS 30.0%
ATATGGTGACAAGTCTATTA+AGG + chr5_3:2248388-2248407 Msa0791320:CDS 30.0%
! AGATACGAAAATACTTGTTG+AGG - chr5_3:2248454-2248473 None:intergenic 30.0%
!!! TATAATTTTTGAAGTAGGCC+AGG - chr5_3:2248553-2248572 None:intergenic 30.0%
TGGCCTACTTCAAAAATTAT+AGG + chr5_3:2248552-2248571 Msa0791320:intron 30.0%
!!! AGGCCTATAATTTTTGAAGT+AGG - chr5_3:2248558-2248577 None:intergenic 30.0%
!! ATAAGTTTTGGCCTATTTAG+TGG - chr5_3:2248711-2248730 None:intergenic 30.0%
AAATAGGCCAAAACTTATGA+AGG + chr5_3:2248713-2248732 Msa0791320:intron 30.0%
! TTTTAGGCCTTCATAAGTTT+TGG - chr5_3:2248723-2248742 None:intergenic 30.0%
! CTATTTGGTAGCAGATATAT+TGG - chr5_3:2248799-2248818 None:intergenic 30.0%
ACTCAAGCTTTCATATGATT+TGG - chr5_3:2248822-2248841 None:intergenic 30.0%
CCTATTTACTTAAATAGGCT+AGG - chr5_3:2248951-2248970 None:intergenic 30.0%
CCTAGCCTATTTAAGTAAAT+AGG + chr5_3:2248948-2248967 Msa0791320:intron 30.0%
ATAATTGAAATCGCATGCTT+TGG + chr5_3:2249054-2249073 Msa0791320:intron 30.0%
! TTTAAAACAAGACAGATTGG+AGG + chr5_3:2249142-2249161 Msa0791320:intron 30.0%
TGCTGTATATATATGATGCT+CGG + chr5_3:2249797-2249816 Msa0791320:three_prime_UTR 30.0%
!!! ATATTTTCTTTTTGGGGCAT+TGG + chr5_3:2249917-2249936 Msa0791320:three_prime_UTR 30.0%
!! TCTAAAGGTAGGGTTTGTTT+TGG + chr5_3:2241815-2241834 Msa0791320:CDS 35.0%
!!! TTGTTTTGGAGTTAACCGTA+CGG + chr5_3:2241829-2241848 Msa0791320:CDS 35.0%
TTAAACTTCGAATCGGTAAC+CGG - chr5_3:2241884-2241903 None:intergenic 35.0%
!! AAACATGGTGGATTGATGAA+CGG + chr5_3:2242094-2242113 Msa0791320:CDS 35.0%
! AGCAGTGATTGCTTTGAATT+TGG + chr5_3:2242183-2242202 Msa0791320:CDS 35.0%
! GTGATTGCTTTGAATTTGGA+AGG + chr5_3:2242187-2242206 Msa0791320:CDS 35.0%
! TGCTTTGAATTTGGAAGGTT+TGG + chr5_3:2242192-2242211 Msa0791320:CDS 35.0%
!!! TGTTTCTATTTTGACGAGCT+TGG + chr5_3:2242238-2242257 Msa0791320:CDS 35.0%
ATCACACGAATCAATGTGTA+CGG + chr5_3:2242345-2242364 Msa0791320:CDS 35.0%
ATCAATGTGTACGGAATGTT+TGG + chr5_3:2242354-2242373 Msa0791320:CDS 35.0%
TTATTGGAAACAAACTCCCT+CGG + chr5_3:2242524-2242543 Msa0791320:CDS 35.0%
TCATTTCAAAGGTAATCCGA+GGG - chr5_3:2242543-2242562 None:intergenic 35.0%
AATCCCTTCACTCATTTCAA+AGG - chr5_3:2242554-2242573 None:intergenic 35.0%
! TTTGAAATGAGTGAAGGGAT+TGG + chr5_3:2242553-2242572 Msa0791320:CDS 35.0%
AAAGAGTCTGCTTAAGTGAT+AGG - chr5_3:2242657-2242676 None:intergenic 35.0%
! ACAACATCTGAACGATTTTC+CGG - chr5_3:2242700-2242719 None:intergenic 35.0%
ACACAACTTGGCAAGAATTA+CGG - chr5_3:2242821-2242840 None:intergenic 35.0%
! TTCACTGCTAGCTTATCTAA+AGG + chr5_3:2242952-2242971 Msa0791320:CDS 35.0%
ATTGAGCTTAAAGATCTGCA+AGG + chr5_3:2242979-2242998 Msa0791320:CDS 35.0%
CTGATAATTGACATTTGCCA+TGG + chr5_3:2243227-2243246 Msa0791320:intron 35.0%
ATTGACATTTGCCATGGATT+TGG + chr5_3:2243233-2243252 Msa0791320:intron 35.0%
!!! GTAGTTCTTTTTTCGAGCTT+AGG - chr5_3:2243327-2243346 None:intergenic 35.0%
! CTCAATTGAGTTGTTTGATG+TGG - chr5_3:2243376-2243395 None:intergenic 35.0%
TATATGTGACGATCATGCAA+TGG + chr5_3:2243561-2243580 Msa0791320:intron 35.0%
ATTGTCTCTGAATAACACTC+AGG + chr5_3:2243592-2243611 Msa0791320:intron 35.0%
TGAATTCCACAATATTTGGC+TGG + chr5_3:2243704-2243723 Msa0791320:intron 35.0%
!! AAGATTTTAGGTGAGAGACT+CGG - chr5_3:2243750-2243769 None:intergenic 35.0%
CTTGTACGTCGATATTAAAG+AGG - chr5_3:2244912-2244931 None:intergenic 35.0%
TACAAGCATATTTAGACCTG+TGG + chr5_3:2243812-2243831 Msa0791320:intron 35.0%
ATTTAGACCTGTGGAATTCT+CGG + chr5_3:2243821-2243840 Msa0791320:intron 35.0%
CAAAGGAAGATTCAATTGCT+TGG - chr5_3:2244370-2244389 None:intergenic 35.0%
AAGAAAGCGGTTGAAAACAA+GGG - chr5_3:2244487-2244506 None:intergenic 35.0%
AAAGAAAGCGGTTGAAAACA+AGG - chr5_3:2244488-2244507 None:intergenic 35.0%
!! CATAAAATGGGTTGTCTATG+TGG + chr5_3:2244558-2244577 Msa0791320:intron 35.0%
! ATCTGAAACTGATTGGAAGA+TGG - chr5_3:2244693-2244712 None:intergenic 35.0%
GGGTTTGTCTAATATATGTC+TGG - chr5_3:2244790-2244809 None:intergenic 35.0%
ATAAGCAAGTTCGACAGATA+TGG + chr5_3:2244819-2244838 Msa0791320:intron 35.0%
CTTGTACGTCGATATTAAAG+AGG + chr5_3:2244912-2244931 Msa0791320:intron 35.0%
AACAGACCAACCAAATATTG+TGG + chr5_3:2244997-2245016 Msa0791320:intron 35.0%
! CATTTGTTTAGTTTCACAGG+GGG + chr5_3:2245151-2245170 Msa0791320:intron 35.0%
!! ACGGACAGTTTTATCAAAAG+AGG - chr5_3:2245191-2245210 None:intergenic 35.0%
TTGATAAAACTGTCCGTGTA+TGG + chr5_3:2245194-2245213 Msa0791320:CDS 35.0%
!! ATTTAGAAGTGTTACCTGCA+AGG - chr5_3:2245221-2245240 None:intergenic 35.0%
TCATGAATAATCTTTGCACG+AGG + chr5_3:2245291-2245310 Msa0791320:intron 35.0%
!! ATCAAAAGGTATCTGCTAAC+TGG - chr5_3:2245416-2245435 None:intergenic 35.0%
AGTGCTAAGCACTTATCAAA+AGG - chr5_3:2245430-2245449 None:intergenic 35.0%
TCGTGTGAATTTCAACCAAT+GGG - chr5_3:2245512-2245531 None:intergenic 35.0%
TTCGTGTGAATTTCAACCAA+TGG - chr5_3:2245513-2245532 None:intergenic 35.0%
TGAGTTCCACATAATTTGGT+GGG + chr5_3:2245549-2245568 Msa0791320:intron 35.0%
! AAATGGATCCCACTATTTTG+GGG - chr5_3:2245581-2245600 None:intergenic 35.0%
TGCGTATTGTCTATCACAAA+TGG - chr5_3:2245736-2245755 None:intergenic 35.0%
! CATCCATGCAAATTTTATGC+AGG + chr5_3:2246107-2246126 Msa0791320:intron 35.0%
AGTCCTGCATAAAATTTGCA+TGG - chr5_3:2246113-2246132 None:intergenic 35.0%
AGGTCATGAGAATAAAGTCA+TGG + chr5_3:2246155-2246174 Msa0791320:CDS 35.0%
TTCTCATACCATTTCCTCAA+GGG - chr5_3:2246279-2246298 None:intergenic 35.0%
AATGGTATGAGAAGAAGGAT+TGG + chr5_3:2246286-2246305 Msa0791320:CDS 35.0%
AAGATTTCCAAAAGCAGTCA+AGG - chr5_3:2246331-2246350 None:intergenic 35.0%
TTTGGAAATCTTCTCTACAC+TGG + chr5_3:2246339-2246358 Msa0791320:CDS 35.0%
GAGATAGAACAATCAAAGCT+TGG + chr5_3:2246367-2246386 Msa0791320:CDS 35.0%
AATCAAAGCTTGGTCATTGA+AGG + chr5_3:2246377-2246396 Msa0791320:CDS 35.0%
ATTAAGACTCCACAATCGAA+CGG - chr5_3:2246882-2246901 None:intergenic 35.0%
! ATTTGTTGCCTATTTAGGTC+TGG + chr5_3:2247143-2247162 Msa0791320:intron 35.0%
TCATTTCTCCAGACCTAAAT+AGG - chr5_3:2247154-2247173 None:intergenic 35.0%
!!! TATGCAATGTTTTGGAACTC+AGG - chr5_3:2247183-2247202 None:intergenic 35.0%
!! ATTTTTGCTATGAGTCTGCA+GGG + chr5_3:2247211-2247230 Msa0791320:CDS 35.0%
TATCAACATGGTTGTGAACA+TGG - chr5_3:2247451-2247470 None:intergenic 35.0%
AGTATTGTCTCATATTCCAG+AGG - chr5_3:2247649-2247668 None:intergenic 35.0%
GACATGAATATGTTTACAGC+TGG + chr5_3:2247772-2247791 Msa0791320:intron 35.0%
AATAGTGGCACAATCTATCA+AGG + chr5_3:2247855-2247874 Msa0791320:intron 35.0%
AAATCCTGATAACTCCAACA+TGG - chr5_3:2247895-2247914 None:intergenic 35.0%
! AGGCTTTTAAATAGGCTTTC+AGG - chr5_3:2248652-2248671 None:intergenic 35.0%
CTATAAGCCTACCACTAAAT+AGG + chr5_3:2248697-2248716 Msa0791320:intron 35.0%
AAAAAGCCTATTAAGCTCGT+CGG - chr5_3:2248916-2248935 None:intergenic 35.0%
TACTTAAATAGGCTAGGCTA+AGG - chr5_3:2248945-2248964 None:intergenic 35.0%
CTTTATAAAAAGCTTGAGCC+TGG + chr5_3:2248971-2248990 Msa0791320:intron 35.0%
! GCCTTTTTATTAAACGAGCT+GGG + chr5_3:2248993-2249012 Msa0791320:intron 35.0%
TGATCATCCACATAGGAATT+AGG - chr5_3:2249171-2249190 None:intergenic 35.0%
AATAAGGCAGGTTGTCAAAT+AGG - chr5_3:2249216-2249235 None:intergenic 35.0%
ACAAAACAAGAGAATAAGGC+AGG - chr5_3:2249228-2249247 None:intergenic 35.0%
! CCATTGGTAGAATATTTCTG+TGG - chr5_3:2249468-2249487 None:intergenic 35.0%
CCACAGAAATATTCTACCAA+TGG + chr5_3:2249465-2249484 Msa0791320:intron 35.0%
GCATAAACAAGAGACAGAAA+AGG - chr5_3:2249628-2249647 None:intergenic 35.0%
ATTGGATTATCTACATCTGG+GGG - chr5_3:2249852-2249871 None:intergenic 35.0%
GATTGGATTATCTACATCTG+GGG - chr5_3:2249853-2249872 None:intergenic 35.0%
GGATTGGATTATCTACATCT+GGG - chr5_3:2249854-2249873 None:intergenic 35.0%
! TGGATTGGATTATCTACATC+TGG - chr5_3:2249855-2249874 None:intergenic 35.0%
! TGTAGAGGCATAATTTGGAT+TGG - chr5_3:2249870-2249889 None:intergenic 35.0%
AATCCAAATTATGCCTCTAC+AGG + chr5_3:2249869-2249888 Msa0791320:three_prime_UTR 35.0%
ATCCAAATTATGCCTCTACA+GGG + chr5_3:2249870-2249889 Msa0791320:three_prime_UTR 35.0%
GGGTTTGTATATAACTTGAC+AGG + chr5_3:2249946-2249965 Msa0791320:three_prime_UTR 35.0%
TCCGATCATTACTTTGTCTC+CGG + chr5_3:2241862-2241881 Msa0791320:CDS 40.0%
ACCGGAGACAAAGTAATGAT+CGG - chr5_3:2241866-2241885 None:intergenic 40.0%
TGCTTGGGTTATCAAGTGTT+TGG + chr5_3:2241916-2241935 Msa0791320:CDS 40.0%
TTGGGTTATCAAGTGTTTGG+AGG + chr5_3:2241919-2241938 Msa0791320:CDS 40.0%
TGGGTTATCAAGTGTTTGGA+GGG + chr5_3:2241920-2241939 Msa0791320:CDS 40.0%
! TGATTCTAGAAGCTTCTGTG+AGG + chr5_3:2241975-2241994 Msa0791320:CDS 40.0%
AGTAGGTTGTGTAGGGTTTA+TGG + chr5_3:2242001-2242020 Msa0791320:CDS 40.0%
GTAGGTTGTGTAGGGTTTAT+GGG + chr5_3:2242002-2242021 Msa0791320:CDS 40.0%
!! TGTTGGTGGTAGTCTGTATT+TGG + chr5_3:2242039-2242058 Msa0791320:CDS 40.0%
!! AACATGGTGGATTGATGAAC+GGG + chr5_3:2242095-2242114 Msa0791320:CDS 40.0%
! AATTTGGAAGGTTTGGTTGC+TGG + chr5_3:2242199-2242218 Msa0791320:CDS 40.0%
!!! TTCTATTTTGACGAGCTTGG+TGG + chr5_3:2242241-2242260 Msa0791320:CDS 40.0%
!!! TCTATTTTGACGAGCTTGGT+GGG + chr5_3:2242242-2242261 Msa0791320:CDS 40.0%
!! TTTGAATGAGGTGTTGGTGA+TGG + chr5_3:2242276-2242295 Msa0791320:CDS 40.0%
!! TTGAATGAGGTGTTGGTGAT+GGG + chr5_3:2242277-2242296 Msa0791320:CDS 40.0%
CTTATGGATCAGGTTTCTTG+TGG + chr5_3:2242307-2242326 Msa0791320:CDS 40.0%
!! GTACACATTGATTCGTGTGA+TGG - chr5_3:2242346-2242365 None:intergenic 40.0%
GGGATTCGAGATATCCAATT+GGG + chr5_3:2242455-2242474 Msa0791320:CDS 40.0%
TCGAGATATCCAATTGGGTT+TGG + chr5_3:2242460-2242479 Msa0791320:CDS 40.0%
ATATCCAATTGGGTTTGGCT+CGG + chr5_3:2242465-2242484 Msa0791320:CDS 40.0%
CTCATTTCAAAGGTAATCCG+AGG - chr5_3:2242544-2242563 None:intergenic 40.0%
!! AGGGATTGGTCTTGATGTTT+CGG + chr5_3:2242567-2242586 Msa0791320:CDS 40.0%
! GGCTAGTTATATTTCTTGGG+TGG + chr5_3:2242588-2242607 Msa0791320:CDS 40.0%
GGAAAATCGTTCAGATGTTG+TGG + chr5_3:2242699-2242718 Msa0791320:CDS 40.0%
GTTCAGATGTTGTGGATGTA+AGG + chr5_3:2242707-2242726 Msa0791320:CDS 40.0%
GGATGTAAGGAAATCCATTC+AGG + chr5_3:2242720-2242739 Msa0791320:CDS 40.0%
ATTCGGAGCTTACGGTAAAT+AGG + chr5_3:2242779-2242798 Msa0791320:CDS 40.0%
ACGGTAAATAGGAACAACAC+AGG + chr5_3:2242790-2242809 Msa0791320:CDS 40.0%
GAATTGCAGGCAAAAGAAGA+TGG + chr5_3:2242880-2242899 Msa0791320:CDS 40.0%
ACCTGATATTCTTCAGAGTG+TGG + chr5_3:2242909-2242928 Msa0791320:CDS 40.0%
! TCCACACTCTGAAGAATATC+AGG - chr5_3:2242913-2242932 None:intergenic 40.0%
ATCCAGTGATACAACCAAGA+TGG - chr5_3:2243005-2243024 None:intergenic 40.0%
!! TGTATCACTGGATTAGCTGT+AGG + chr5_3:2243012-2243031 Msa0791320:CDS 40.0%
! GTCGCCTCTTTGATAACAAA+TGG - chr5_3:2243168-2243187 None:intergenic 40.0%
ACATTTGCCATGGATTTGGA+CGG + chr5_3:2243237-2243256 Msa0791320:intron 40.0%
!! TCACCATACAGCTTTTGAGT+TGG + chr5_3:2243264-2243283 Msa0791320:intron 40.0%
CAACCAACTCAAAAGCTGTA+TGG - chr5_3:2243270-2243289 None:intergenic 40.0%
!!! CATACAGCTTTTGAGTTGGT+TGG + chr5_3:2243268-2243287 Msa0791320:intron 40.0%
AACTACACGAAAATCACACG+AGG + chr5_3:2243341-2243360 Msa0791320:intron 40.0%
ACTACACGAAAATCACACGA+GGG + chr5_3:2243342-2243361 Msa0791320:intron 40.0%
GCTCTTAGTTAGCATATGTG+TGG + chr5_3:2243481-2243500 Msa0791320:intron 40.0%
CTTAGTTAGCATATGTGTGG+AGG + chr5_3:2243484-2243503 Msa0791320:intron 40.0%
GGTTGCTTCACCTATTTCAT+CGG + chr5_3:2243505-2243524 Msa0791320:intron 40.0%
TGAAACACTGCCGATGAAAT+AGG - chr5_3:2243518-2243537 None:intergenic 40.0%
! TGATGACTAGAAAGTGTGTC+CGG - chr5_3:2244521-2244540 None:intergenic 40.0%
GTCTAATATATGTCTGGCAG+TGG - chr5_3:2244784-2244803 None:intergenic 40.0%
ATCTAGACCAGTGGAATTCT+CGG - chr5_3:2244889-2244908 None:intergenic 40.0%
TACAAGCATATCTAGACCAG+TGG - chr5_3:2244898-2244917 None:intergenic 40.0%
CTTGCTAATACTCTCCTTTC+AGG + chr5_3:2245479-2245498 Msa0791320:intron 40.0%
CTGAGTTCCACATAATTTGG+TGG + chr5_3:2245548-2245567 Msa0791320:intron 40.0%
ATGAGTCCCACCAAATTATG+TGG - chr5_3:2245558-2245577 None:intergenic 40.0%
TACTAATCCTGCATAGCTGA+AGG - chr5_3:2245919-2245938 None:intergenic 40.0%
TTGTGTATAAGTGGTGACAG+TGG + chr5_3:2246207-2246226 Msa0791320:CDS 40.0%
CTTCTCATACCATTTCCTCA+AGG - chr5_3:2246280-2246299 None:intergenic 40.0%
GAGGAAATGGTATGAGAAGA+AGG + chr5_3:2246281-2246300 Msa0791320:CDS 40.0%
! ATCCATTCCTTGACTGCTTT+TGG + chr5_3:2246321-2246340 Msa0791320:CDS 40.0%
TTCCAAAAGCAGTCAAGGAA+TGG - chr5_3:2246326-2246345 None:intergenic 40.0%
AATCTTCTCTACACTGGAAG+TGG + chr5_3:2246345-2246364 Msa0791320:CDS 40.0%
ATTACCGCCAAATCAAATGG+CGG - chr5_3:2246592-2246611 None:intergenic 40.0%
GTCATTACCGCCAAATCAAA+TGG - chr5_3:2246595-2246614 None:intergenic 40.0%
! CTCACTACATTTTTCCAGGA+TGG + chr5_3:2246764-2246783 Msa0791320:intron 40.0%
TGGAACTTTGATGTGCACAA+TGG + chr5_3:2246784-2246803 Msa0791320:CDS 40.0%
ACTTTGATGTGCACAATGGA+TGG + chr5_3:2246788-2246807 Msa0791320:CDS 40.0%
GTGTGGAAACTACAGATTTG+TGG - chr5_3:2246814-2246833 None:intergenic 40.0%
CTCATCACATACTGAAAGTG+TGG - chr5_3:2246831-2246850 None:intergenic 40.0%
CACACTTTCAGTATGTGATG+AGG + chr5_3:2246829-2246848 Msa0791320:CDS 40.0%
TGTGATGAGGTTCTTTACAG+TGG + chr5_3:2246842-2246861 Msa0791320:CDS 40.0%
AGGTTCTTTACAGTGGTAGT+TGG + chr5_3:2246849-2246868 Msa0791320:CDS 40.0%
GGTTCTTTACAGTGGTAGTT+GGG + chr5_3:2246850-2246869 Msa0791320:CDS 40.0%
TCTTAATGATCATAGCCCGT+TGG + chr5_3:2246895-2246914 Msa0791320:CDS 40.0%
GACTCGATATAATCATCTCC+TGG + chr5_3:2247097-2247116 Msa0791320:intron 40.0%
AATCATCTCCTGGCATTGTT+AGG + chr5_3:2247107-2247126 Msa0791320:intron 40.0%
AGATGTTACCTAACAATGCC+AGG - chr5_3:2247118-2247137 None:intergenic 40.0%
! GGCACCATTATGCAATGTTT+TGG - chr5_3:2247191-2247210 None:intergenic 40.0%
CTGCAGACTCATAGCAAAAA+TGG - chr5_3:2247212-2247231 None:intergenic 40.0%
!! CATTTTTGCTATGAGTCTGC+AGG + chr5_3:2247210-2247229 Msa0791320:CDS 40.0%
!! CAGGGAAAATGGCTTTATAC+AGG + chr5_3:2247229-2247248 Msa0791320:CDS 40.0%
!! GGAAAATGGCTTTATACAGG+AGG + chr5_3:2247232-2247251 Msa0791320:CDS 40.0%
!! AATGGCTTTATACAGGAGGT+TGG + chr5_3:2247236-2247255 Msa0791320:CDS 40.0%
!! ATGGCTTTATACAGGAGGTT+GGG + chr5_3:2247237-2247256 Msa0791320:CDS 40.0%
GGTACCTTAGTTTATCTCCT+AGG - chr5_3:2247481-2247500 None:intergenic 40.0%
GCACAATCTATCAAGGAAGA+TGG + chr5_3:2247862-2247881 Msa0791320:intron 40.0%
AATGGATCCAAATGCGTTGA+CGG - chr5_3:2248312-2248331 None:intergenic 40.0%
AGCATGCTTTGTGTTGCATA+GGG + chr5_3:2248485-2248504 Msa0791320:intron 40.0%
!! ATAAGCCTATGACGGGTAAT+AGG - chr5_3:2248589-2248608 None:intergenic 40.0%
CTCGAAAATAAGCCTATGAC+GGG - chr5_3:2248596-2248615 None:intergenic 40.0%
CCTCGAAAATAAGCCTATGA+CGG - chr5_3:2248597-2248616 None:intergenic 40.0%
! GCTTCATCAGGCCTTTAAAA+AGG - chr5_3:2248630-2248649 None:intergenic 40.0%
CCTAGGCCTTAGTGTAAAAT+AGG - chr5_3:2248672-2248691 None:intergenic 40.0%
! CCTATTTTACACTAAGGCCT+AGG + chr5_3:2248669-2248688 Msa0791320:intron 40.0%
GTAGGCTTATAGATGTTCCT+AGG - chr5_3:2248689-2248708 None:intergenic 40.0%
!! GTTTTGGCCTATTTAGTGGT+AGG - chr5_3:2248707-2248726 None:intergenic 40.0%
AAAAGCCTATTAAGCTCGTC+GGG - chr5_3:2248915-2248934 None:intergenic 40.0%
GCTCGTTTAATAAAAAGGCC+AGG - chr5_3:2248992-2249011 None:intergenic 40.0%
! GGCCTTTTTATTAAACGAGC+TGG + chr5_3:2248992-2249011 Msa0791320:intron 40.0%
GCCCAGCTCGTTTAATAAAA+AGG - chr5_3:2248997-2249016 None:intergenic 40.0%
AATAACATCTACACGGCTCT+AGG - chr5_3:2249088-2249107 None:intergenic 40.0%
GGTCGGATGTTAATATTTCC+TGG - chr5_3:2249195-2249214 None:intergenic 40.0%
AATTGAAGCTTGTCACACAC+TGG - chr5_3:2249259-2249278 None:intergenic 40.0%
ATGCTAGCTACTGATGCATA+TGG + chr5_3:2249288-2249307 Msa0791320:intron 40.0%
! AGTGTATGTTCAGCTTTGTG+AGG + chr5_3:2249439-2249458 Msa0791320:intron 40.0%
ATTCTATCAACTCTCTGTCG+AGG - chr5_3:2249563-2249582 None:intergenic 40.0%
ATTTAGCACGATAAACCTGC+AGG - chr5_3:2249693-2249712 None:intergenic 40.0%
TTGTGAATCAACCAGAACTC+TGG - chr5_3:2249826-2249845 None:intergenic 40.0%
!!! TTTTTGGGGCATTGGTTCTT+GGG + chr5_3:2249925-2249944 Msa0791320:three_prime_UTR 40.0%
TCGGAGTTAAACTCACCGTA+CGG - chr5_3:2241847-2241866 None:intergenic 45.0%
GGGTTATCAAGTGTTTGGAG+GGG + chr5_3:2241921-2241940 Msa0791320:CDS 45.0%
TTGAATGAGGTTGTGAGGGA+AGG + chr5_3:2241944-2241963 Msa0791320:CDS 45.0%
TGAATGAGGTTGTGAGGGAA+GGG + chr5_3:2241945-2241964 Msa0791320:CDS 45.0%
! TGTGTAGGGTTTATGGGTTG+TGG + chr5_3:2242008-2242027 Msa0791320:CDS 45.0%
!! GTCTGTATTTGGTGTGTGAG+AGG + chr5_3:2242050-2242069 Msa0791320:CDS 45.0%
!! GGTAGGGTATTGGAGAAACA+TGG + chr5_3:2242079-2242098 Msa0791320:CDS 45.0%
!! AGGGTATTGGAGAAACATGG+TGG + chr5_3:2242082-2242101 Msa0791320:CDS 45.0%
!! ACATGGTGGATTGATGAACG+GGG + chr5_3:2242096-2242115 Msa0791320:CDS 45.0%
! AGGTTTGGTTGCTGGATGTT+TGG + chr5_3:2242207-2242226 Msa0791320:CDS 45.0%
! GGTTTGGTTGCTGGATGTTT+GGG + chr5_3:2242208-2242227 Msa0791320:CDS 45.0%
!!! CTATTTTGACGAGCTTGGTG+GGG + chr5_3:2242243-2242262 Msa0791320:CDS 45.0%
! TGAGCTTTTTGTTAGCCCTG+AGG + chr5_3:2242387-2242406 Msa0791320:CDS 45.0%
AGGGTTGTTAATCCAGAGAG+CGG + chr5_3:2242433-2242452 Msa0791320:CDS 45.0%
GGGGATTCGAGATATCCAAT+TGG + chr5_3:2242454-2242473 Msa0791320:CDS 45.0%
! TTTGGGTGATTCGGAGCTTA+CGG + chr5_3:2242771-2242790 Msa0791320:CDS 45.0%
GTTGCTCGAGGAAAGTTCTA+AGG + chr5_3:2242843-2242862 Msa0791320:CDS 45.0%
TTGCAGGCAAAAGAAGATGG+TGG + chr5_3:2242883-2242902 Msa0791320:CDS 45.0%
AAAGATCTGCAAGGCCATCT+TGG + chr5_3:2242988-2243007 Msa0791320:CDS 45.0%
!! ATCACTGGATTAGCTGTAGG+AGG + chr5_3:2243015-2243034 Msa0791320:CDS 45.0%
TTGTTATCAAAGAGGCGACG+CGG + chr5_3:2243169-2243188 Msa0791320:intron 45.0%
CTACACGAAAATCACACGAG+GGG + chr5_3:2243343-2243362 Msa0791320:intron 45.0%
! TGAAGGAACTTTGTGCTGGT+CGG - chr5_3:2243648-2243667 None:intergenic 45.0%
CTTGTGAAGGAACTTTGTGC+TGG - chr5_3:2243652-2243671 None:intergenic 45.0%
CAGCACAAAGTTCCTTCACA+AGG + chr5_3:2243650-2243669 Msa0791320:intron 45.0%
CTTAAGTGTGCACCTTGTGA+AGG - chr5_3:2243665-2243684 None:intergenic 45.0%
!! GGAATTCAAAGGTGCTTACG+AGG - chr5_3:2243692-2243711 None:intergenic 45.0%
ATCAGGCCAGCCAAATATTG+TGG - chr5_3:2243713-2243732 None:intergenic 45.0%
! CGGATTCTGCAGCTTTTATC+AGG - chr5_3:2243730-2243749 None:intergenic 45.0%
GGGTTTGCCTAATATGTGTC+TGG + chr5_3:2243920-2243939 Msa0791320:intron 45.0%
TCCACTGCCAGACACATATT+AGG - chr5_3:2243930-2243949 None:intergenic 45.0%
!! ATGTGTCTGGCAGTGGATTT+TGG + chr5_3:2243933-2243952 Msa0791320:intron 45.0%
TGGATTCAATCACGGCACAA+AGG - chr5_3:2244387-2244406 None:intergenic 45.0%
!! AATGGGTTGTCTATGTGGCA+AGG + chr5_3:2244563-2244582 Msa0791320:intron 45.0%
! ATGGGTTGTCTATGTGGCAA+GGG + chr5_3:2244564-2244583 Msa0791320:intron 45.0%
TGGGCACTAACTTCTACAAC+TGG - chr5_3:2244597-2244616 None:intergenic 45.0%
TATATGTGGCGGTTGATCCA+TGG - chr5_3:2244620-2244639 None:intergenic 45.0%
! TGTGTCTGTGACTGTGGTTT+TGG - chr5_3:2244729-2244748 None:intergenic 45.0%
! TTTTGCACCGAGAATTCCAC+TGG + chr5_3:2244879-2244898 Msa0791320:intron 45.0%
GCTCTCTCTGAATAACACTC+AGG - chr5_3:2245063-2245082 None:intergenic 45.0%
TTACCTGCAAGGACCATACA+CGG - chr5_3:2245210-2245229 None:intergenic 45.0%
!! CTGCTAACTGGTGTCATGTT+GGG - chr5_3:2245404-2245423 None:intergenic 45.0%
!! TCTGCTAACTGGTGTCATGT+TGG - chr5_3:2245405-2245424 None:intergenic 45.0%
GGACTCATCCCCAAAATAGT+GGG + chr5_3:2245570-2245589 Msa0791320:intron 45.0%
CAAGTGTGTTTGCTCTTGAG+TGG + chr5_3:2245807-2245826 Msa0791320:intron 45.0%
AATCCTGCATAGCTGAAGGT+GGG - chr5_3:2245915-2245934 None:intergenic 45.0%
TAATCCTGCATAGCTGAAGG+TGG - chr5_3:2245916-2245935 None:intergenic 45.0%
ACACGTCAACAGAATAGCTG+AGG - chr5_3:2246085-2246104 None:intergenic 45.0%
TGTATAAGTGGTGACAGTGG+CGG + chr5_3:2246210-2246229 Msa0791320:CDS 45.0%
CTCAAGGGATCTTGACTAAG+AGG - chr5_3:2246264-2246283 None:intergenic 45.0%
CTCTTAGTCAAGATCCCTTG+AGG + chr5_3:2246262-2246281 Msa0791320:CDS 45.0%
GTCAAGATCCCTTGAGGAAA+TGG + chr5_3:2246268-2246287 Msa0791320:CDS 45.0%
! AAGAAGGATTGGCGCTTTAG+TGG + chr5_3:2246297-2246316 Msa0791320:CDS 45.0%
TTCTCATAGGGGGTCAGAAA+TGG - chr5_3:2246496-2246515 None:intergenic 45.0%
! CAAATCAAATGGCGGTTTGG+CGG - chr5_3:2246584-2246603 None:intergenic 45.0%
!! CAAACCGCCATTTGATTTGG+CGG + chr5_3:2246585-2246604 Msa0791320:intron 45.0%
TTGTCATAGGGGGTCAGAAA+TGG + chr5_3:2246673-2246692 Msa0791320:intron 45.0%
TGCACATCAAAGTTCCATCC+TGG - chr5_3:2246781-2246800 None:intergenic 45.0%
CTTTACAGTGGTAGTTGGGA+TGG + chr5_3:2246854-2246873 Msa0791320:CDS 45.0%
TAATGATCATAGCCCGTTGG+TGG + chr5_3:2246898-2246917 Msa0791320:CDS 45.0%
CTGGTTGCAGCATATGAGAA+TGG + chr5_3:2246986-2247005 Msa0791320:CDS 45.0%
CTATGAGTCTGCAGGGAAAA+TGG + chr5_3:2247218-2247237 Msa0791320:CDS 45.0%
CGATAAGGTCAAATCACCTC+TGG + chr5_3:2247630-2247649 Msa0791320:intron 45.0%
AAGATGGTACCACTCCATGT+TGG + chr5_3:2247878-2247897 Msa0791320:intron 45.0%
CTGATAACTCCAACATGGAG+TGG - chr5_3:2247890-2247909 None:intergenic 45.0%
CACTCCATGTTGGAGTTATC+AGG + chr5_3:2247888-2247907 Msa0791320:intron 45.0%
CACAACAGAACTGGAAGGAA+TGG - chr5_3:2248330-2248349 None:intergenic 45.0%
CATAGCTGTCACAACAGAAC+TGG - chr5_3:2248339-2248358 None:intergenic 45.0%
ACAGCTATGTTATGCAGCCA+AGG + chr5_3:2248350-2248369 Msa0791320:CDS 45.0%
GAGCATGCTTTGTGTTGCAT+AGG + chr5_3:2248484-2248503 Msa0791320:intron 45.0%
GCATGCTTTGTGTTGCATAG+GGG + chr5_3:2248486-2248505 Msa0791320:intron 45.0%
TGTTGCATAGGGGTGGAAAT+GGG + chr5_3:2248496-2248515 Msa0791320:intron 45.0%
!!! TTTTGAAGTAGGCCAGGCTT+AGG - chr5_3:2248547-2248566 None:intergenic 45.0%
!! CCGTCATAGGCTTATTTTCG+AGG + chr5_3:2248594-2248613 Msa0791320:intron 45.0%
!! ATAGGCTTATTTTCGAGGCC+TGG + chr5_3:2248599-2248618 Msa0791320:intron 45.0%
! ATCAGGCCTTTAAAAAGGCC+AGG - chr5_3:2248625-2248644 None:intergenic 45.0%
ATAGGCTTTCAGGCTTCATC+AGG - chr5_3:2248642-2248661 None:intergenic 45.0%
!!! GTGCATTTTAGAGCCTAGCT+CGG - chr5_3:2249019-2249038 None:intergenic 45.0%
! GAGGCATCCTAATTCCTATG+TGG + chr5_3:2249161-2249180 Msa0791320:intron 45.0%
TCCTATGTGGATGATCAACC+AGG + chr5_3:2249174-2249193 Msa0791320:intron 45.0%
TCCTGGTTGATCATCCACAT+AGG - chr5_3:2249178-2249197 None:intergenic 45.0%
AGGCAGGTTGTCAAATAGGT+CGG - chr5_3:2249212-2249231 None:intergenic 45.0%
!! CTGTTGATGACAGTTGTTGC+TGG - chr5_3:2249729-2249748 None:intergenic 45.0%
! CACCCTGTAGAGGCATAATT+TGG - chr5_3:2249875-2249894 None:intergenic 45.0%
ATGTACAGAACACCCTGTAG+AGG - chr5_3:2249885-2249904 None:intergenic 45.0%
!!! CTTTTTGGGGCATTGGTTCT+TGG + chr5_3:2249924-2249943 Msa0791320:three_prime_UTR 45.0%
!!! TTTTGGGGCATTGGTTCTTG+GGG + chr5_3:2249926-2249945 Msa0791320:three_prime_UTR 45.0%
ACCGTTTCCGTTACTGAGGA+CGG + chr5_3:2241770-2241789 Msa0791320:CDS 50.0%
! ACCGTCCTCAGTAACGGAAA+CGG - chr5_3:2241774-2241793 None:intergenic 50.0%
ACCAACACCGTCCTCAGTAA+CGG - chr5_3:2241780-2241799 None:intergenic 50.0%
!! TTACTGAGGACGGTGTTGGT+AGG + chr5_3:2241780-2241799 Msa0791320:CDS 50.0%
GTGTTTGGAGGGGTTGAATG+AGG + chr5_3:2241931-2241950 Msa0791320:CDS 50.0%
AGGGGTTGAATGAGGTTGTG+AGG + chr5_3:2241939-2241958 Msa0791320:CDS 50.0%
GGGGTTGAATGAGGTTGTGA+GGG + chr5_3:2241940-2241959 Msa0791320:CDS 50.0%
AAGCTTCTGTGAGGCAGAGT+AGG + chr5_3:2241984-2242003 Msa0791320:CDS 50.0%
TGAGGCAGAGTAGGTTGTGT+AGG + chr5_3:2241993-2242012 Msa0791320:CDS 50.0%
GAGGCAGAGTAGGTTGTGTA+GGG + chr5_3:2241994-2242013 Msa0791320:CDS 50.0%
! GGTTTATGGGTTGTGGAGTG+AGG + chr5_3:2242015-2242034 Msa0791320:CDS 50.0%
TTGTGGAGTGAGGTTGTTGG+TGG + chr5_3:2242025-2242044 Msa0791320:CDS 50.0%
TTGGTGTGTGAGAGGCAATG+TGG + chr5_3:2242058-2242077 Msa0791320:CDS 50.0%
TGTGTGAGAGGCAATGTGGT+AGG + chr5_3:2242062-2242081 Msa0791320:CDS 50.0%
GTGTGAGAGGCAATGTGGTA+GGG + chr5_3:2242063-2242082 Msa0791320:CDS 50.0%
GAGGCAATGTGGTAGGGTAT+TGG + chr5_3:2242069-2242088 Msa0791320:CDS 50.0%
!! CATGGTGGATTGATGAACGG+GGG + chr5_3:2242097-2242116 Msa0791320:CDS 50.0%
! GAACGGGGGTGGTTTGAAAT+TGG + chr5_3:2242111-2242130 Msa0791320:CDS 50.0%
!! ATGAGGTGTTGGTGATGGGA+AGG + chr5_3:2242281-2242300 Msa0791320:CDS 50.0%
!! GGTGATGGGAAGGAAGCTTA+TGG + chr5_3:2242291-2242310 Msa0791320:CDS 50.0%
GGGAAGGAAGCTTATGGATC+AGG + chr5_3:2242297-2242316 Msa0791320:CDS 50.0%
GGATCAGGTTTCTTGTGGCA+CGG + chr5_3:2242312-2242331 Msa0791320:CDS 50.0%
GATCAGGTTTCTTGTGGCAC+GGG + chr5_3:2242313-2242332 Msa0791320:CDS 50.0%
GGGTTGTTAATCCAGAGAGC+GGG + chr5_3:2242434-2242453 Msa0791320:CDS 50.0%
GGTTGTTAATCCAGAGAGCG+GGG + chr5_3:2242435-2242454 Msa0791320:CDS 50.0%
ACATCCGAGCCAAACCCAAT+TGG - chr5_3:2242472-2242491 None:intergenic 50.0%
!! TTGGGTTTGGCTCGGATGTA+TGG + chr5_3:2242473-2242492 Msa0791320:CDS 50.0%
! GTGTTGCTGCGGGTTCTTAT+TGG + chr5_3:2242508-2242527 Msa0791320:CDS 50.0%
CCAGTGTCTGGACATCAATC+CGG + chr5_3:2242678-2242697 Msa0791320:CDS 50.0%
CTCGAGCAACTGACACAACT+TGG - chr5_3:2242833-2242852 None:intergenic 50.0%
CAAGTTGTGTCAGTTGCTCG+AGG + chr5_3:2242831-2242850 Msa0791320:CDS 50.0%
GCCTGCAATTCGTGTTCTCT+CGG - chr5_3:2242871-2242890 None:intergenic 50.0%
GGCCATCTTGGTTGTATCAC+TGG + chr5_3:2243000-2243019 Msa0791320:CDS 50.0%
TGTTATCAAAGAGGCGACGC+GGG + chr5_3:2243170-2243189 Msa0791320:intron 50.0%
TGATCTGCCGTCCAAATCCA+TGG - chr5_3:2243247-2243266 None:intergenic 50.0%
CATCGGCAGTGTTTCACTTG+AGG + chr5_3:2243522-2243541 Msa0791320:intron 50.0%
! GAAGGAACTTTGTGCTGGTC+GGG - chr5_3:2243647-2243666 None:intergenic 50.0%
! TTTTGCGCCGAGAATTCCAC+AGG - chr5_3:2243831-2243850 None:intergenic 50.0%
GCCTAATATGTGTCTGGCAG+TGG + chr5_3:2243926-2243945 Msa0791320:intron 50.0%
GAAGCATGTGTGTGTGACTG+TGG + chr5_3:2243975-2243994 Msa0791320:intron 50.0%
TGTGTGTGTGACTGTGGTTC+TGG + chr5_3:2243981-2244000 Msa0791320:intron 50.0%
GTAGAAGTTAGTGCCCACCA+TGG + chr5_3:2244600-2244619 Msa0791320:intron 50.0%
GGATCAACCGCCACATATAG+TGG + chr5_3:2244621-2244640 Msa0791320:intron 50.0%
ACCGCCACATATAGTGGTGA+TGG + chr5_3:2244627-2244646 Msa0791320:intron 50.0%
GCCATCACCACTATATGTGG+CGG - chr5_3:2244631-2244650 None:intergenic 50.0%
!! GCCACATATAGTGGTGATGG+CGG + chr5_3:2244630-2244649 Msa0791320:intron 50.0%
!! ACATATAGTGGTGATGGCGG+CGG + chr5_3:2244633-2244652 Msa0791320:intron 50.0%
!!! GTCTGTGACTGTGGTTTTGG+TGG - chr5_3:2244726-2244745 None:intergenic 50.0%
!! CAATGGGAAAGCGTCCTGAA+AGG - chr5_3:2245496-2245515 None:intergenic 50.0%
CTTTCAGGACGCTTTCCCAT+TGG + chr5_3:2245494-2245513 Msa0791320:intron 50.0%
GGGACTCATCCCCAAAATAG+TGG + chr5_3:2245569-2245588 Msa0791320:intron 50.0%
TTTCCCACCTTCAGCTATGC+AGG + chr5_3:2245909-2245928 Msa0791320:intron 50.0%
! TGGCGGAGGCATATTTGTCT+GGG + chr5_3:2246227-2246246 Msa0791320:CDS 50.0%
CGCCAAACCGCCATTTGATT+TGG + chr5_3:2246582-2246601 Msa0791320:intron 50.0%
CGCCAAATCAAATGGCGGTT+TGG - chr5_3:2246587-2246606 None:intergenic 50.0%
TTGGCGGTAATGACCACTAC+AGG + chr5_3:2246601-2246620 Msa0791320:intron 50.0%
AGGATAGACTTCGTCTCTCC+AGG - chr5_3:2246941-2246960 None:intergenic 50.0%
TGGAGAGACGAAGTCTATCC+TGG + chr5_3:2246940-2246959 Msa0791320:CDS 50.0%
TCCTGGCTATTACTGCCAGT+AGG + chr5_3:2246957-2246976 Msa0791320:CDS 50.0%
CCTGGCTATTACTGCCAGTA+GGG + chr5_3:2246958-2246977 Msa0791320:CDS 50.0%
TACTGCCAGTAGGGATTTGC+TGG + chr5_3:2246967-2246986 Msa0791320:CDS 50.0%
TGCAACCAGCAAATCCCTAC+TGG - chr5_3:2246975-2246994 None:intergenic 50.0%
GAACTGACCGTCAACGCATT+TGG + chr5_3:2248302-2248321 Msa0791320:CDS 50.0%
GCTGTCACAACAGAACTGGA+AGG - chr5_3:2248335-2248354 None:intergenic 50.0%
TGCTTTGTGTTGCATAGGGG+TGG + chr5_3:2248489-2248508 Msa0791320:intron 50.0%
GTGTTGCATAGGGGTGGAAA+TGG + chr5_3:2248495-2248514 Msa0791320:intron 50.0%
!! CCTATGACGGGTAATAGGTC+AGG - chr5_3:2248584-2248603 None:intergenic 50.0%
CCTGACCTATTACCCGTCAT+AGG + chr5_3:2248581-2248600 Msa0791320:intron 50.0%
!! GTAACGGAAACGGTGTCGTG+TGG - chr5_3:2241764-2241783 None:intergenic 55.0%
CGACACCGTTTCCGTTACTG+AGG + chr5_3:2241766-2241785 Msa0791320:CDS 55.0%
TCCGTTACTGAGGACGGTGT+TGG + chr5_3:2241776-2241795 Msa0791320:CDS 55.0%
GAGGTTGTGAGGGAAGGGTT+AGG + chr5_3:2241950-2241969 Msa0791320:CDS 55.0%
GGGTTGTGGAGTGAGGTTGT+TGG + chr5_3:2242022-2242041 Msa0791320:CDS 55.0%
TATCTCGAATCCCCGCTCTC+TGG - chr5_3:2242448-2242467 None:intergenic 55.0%
! TGGCTCGGATGTATGGTCGT+TGG + chr5_3:2242480-2242499 Msa0791320:CDS 55.0%
!! CGTTGGCTTGTGTGTTGCTG+CGG + chr5_3:2242497-2242516 Msa0791320:CDS 55.0%
!! GTTGGCTTGTGTGTTGCTGC+GGG + chr5_3:2242498-2242517 Msa0791320:CDS 55.0%
GCAGACTCTTTGCCAGTGTC+TGG + chr5_3:2242666-2242685 Msa0791320:CDS 55.0%
CCGGATTGATGTCCAGACAC+TGG - chr5_3:2242681-2242700 None:intergenic 55.0%
GCCGAGAGAACACGAATTGC+AGG + chr5_3:2242867-2242886 Msa0791320:CDS 55.0%
!! GTGTGTGACTGTGGTTCTGG+TGG + chr5_3:2243984-2244003 Msa0791320:intron 55.0%
TGTGGCGGTTGATCCATGGT+GGG - chr5_3:2244616-2244635 None:intergenic 55.0%
ATGTGGCGGTTGATCCATGG+TGG - chr5_3:2244617-2244636 None:intergenic 55.0%
GCCGCCATCACCACTATATG+TGG - chr5_3:2244634-2244653 None:intergenic 55.0%
GCGGCGATGGTAGTAGTTAC+AGG + chr5_3:2244652-2244671 Msa0791320:intron 55.0%
GAAGCGTGTGTCTGTGACTG+TGG - chr5_3:2244735-2244754 None:intergenic 55.0%
TGTCCGTGTATGGTCCTTGC+AGG + chr5_3:2245204-2245223 Msa0791320:CDS 55.0%
ATAAGTGGTGACAGTGGCGG+AGG + chr5_3:2246213-2246232 Msa0791320:CDS 55.0%
! GTGGCGGAGGCATATTTGTC+TGG + chr5_3:2246226-2246245 Msa0791320:CDS 55.0%
! GGCGGAGGCATATTTGTCTG+GGG + chr5_3:2246228-2246247 Msa0791320:CDS 55.0%
! GCGGAGGCATATTTGTCTGG+GGG + chr5_3:2246229-2246248 Msa0791320:CDS 55.0%
GGGATGGAACCGTTCGATTG+TGG + chr5_3:2246870-2246889 Msa0791320:CDS 55.0%
!! ATAGCCCGTTGGTGGTGCTA+GGG + chr5_3:2246906-2246925 Msa0791320:CDS 55.0%
TCTTCCCCTAGCACCACCAA+CGG - chr5_3:2246914-2246933 None:intergenic 55.0%
GTGCTAGGGGAAGATCTTCC+TGG + chr5_3:2246920-2246939 Msa0791320:CDS 55.0%
CCCTACTGGCAGTAATAGCC+AGG - chr5_3:2246961-2246980 None:intergenic 55.0%
! CATAGGGGTGGAAATGGGCT+AGG + chr5_3:2248501-2248520 Msa0791320:intron 55.0%
GGCTTAGGCCTTACAAAGCC+CGG - chr5_3:2248532-2248551 None:intergenic 55.0%
! GGCTTTGTAAGGCCTAAGCC+TGG + chr5_3:2248532-2248551 Msa0791320:intron 55.0%
ACGGGTAATAGGTCAGGCTC+AGG - chr5_3:2248578-2248597 None:intergenic 55.0%
!! CTTATTTTCGAGGCCTGGCC+TGG + chr5_3:2248604-2248623 Msa0791320:intron 55.0%
!! GCCTGGCCTGGCCTTTTTAA+AGG + chr5_3:2248616-2248635 Msa0791320:intron 55.0%
! GCCTTTAAAAAGGCCAGGCC+AGG - chr5_3:2248620-2248639 None:intergenic 55.0%
ATGCTCGGCTTCCAGAGTTC+TGG + chr5_3:2249812-2249831 Msa0791320:three_prime_UTR 55.0%
!! GGTGGATTGATGAACGGGGG+TGG + chr5_3:2242100-2242119 Msa0791320:CDS 60.0%
AAAGAGGCGACGCGGGCTTA+AGG + chr5_3:2243177-2243196 Msa0791320:intron 60.0%
!! CATAGCCCGTTGGTGGTGCT+AGG + chr5_3:2246905-2246924 Msa0791320:CDS 60.0%
!! TAGCCCGTTGGTGGTGCTAG+GGG + chr5_3:2246907-2246926 Msa0791320:CDS 60.0%
CTTCCCCTAGCACCACCAAC+GGG - chr5_3:2246913-2246932 None:intergenic 60.0%
AGGCCTTACAAAGCCCGGCT+CGG - chr5_3:2248527-2248546 None:intergenic 60.0%
GCCTATTAAGCTCGTCGGGC+CGG - chr5_3:2248911-2248930 None:intergenic 60.0%
TAAACGAGCTGGGCCGAGCT+AGG + chr5_3:2249003-2249022 Msa0791320:intron 60.0%
!! GGAAATGGGCTAGGCCGAGC+CGG + chr5_3:2248510-2248529 Msa0791320:intron 65.0%
!! GAAATGGGCTAGGCCGAGCC+GGG + chr5_3:2248511-2248530 Msa0791320:intron 65.0%
! AGGCCGAGCCGGGCTTTGTA+AGG + chr5_3:2248521-2248540 Msa0791320:intron 65.0%
GCCGGCCCGACGAGCTTAAT+AGG + chr5_3:2248907-2248926 Msa0791320:intron 65.0%
!! AGTGGTGATGGCGGCGGCGA+TGG + chr5_3:2244639-2244658 Msa0791320:intron 70.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 2241758 2250029 2241758 ID=Msa0791320;Name=Msa0791320
chr5_3 mRNA 2241758 2250029 2241758 ID=Msa0791320-mRNA-1;Parent=Msa0791320;Name=Msa0791320-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|1|0.85|1|1|1|7|315|702
chr5_3 exon 2241758 2243036 2241758 ID=Msa0791320-mRNA-1:exon:912;Parent=Msa0791320-mRNA-1
chr5_3 exon 2245170 2245225 2245170 ID=Msa0791320-mRNA-1:exon:913;Parent=Msa0791320-mRNA-1
chr5_3 exon 2246129 2246398 2246129 ID=Msa0791320-mRNA-1:exon:914;Parent=Msa0791320-mRNA-1
chr5_3 exon 2246782 2247018 2246782 ID=Msa0791320-mRNA-1:exon:915;Parent=Msa0791320-mRNA-1
chr5_3 exon 2247160 2247279 2247160 ID=Msa0791320-mRNA-1:exon:916;Parent=Msa0791320-mRNA-1
chr5_3 exon 2248281 2248409 2248281 ID=Msa0791320-mRNA-1:exon:917;Parent=Msa0791320-mRNA-1
chr5_3 exon 2249697 2250029 2249697 ID=Msa0791320-mRNA-1:exon:918;Parent=Msa0791320-mRNA-1
chr5_3 CDS 2241758 2243036 2241758 ID=Msa0791320-mRNA-1:cds;Parent=Msa0791320-mRNA-1
chr5_3 CDS 2245170 2245225 2245170 ID=Msa0791320-mRNA-1:cds;Parent=Msa0791320-mRNA-1
chr5_3 CDS 2246129 2246398 2246129 ID=Msa0791320-mRNA-1:cds;Parent=Msa0791320-mRNA-1
chr5_3 CDS 2246782 2247018 2246782 ID=Msa0791320-mRNA-1:cds;Parent=Msa0791320-mRNA-1
chr5_3 CDS 2247160 2247279 2247160 ID=Msa0791320-mRNA-1:cds;Parent=Msa0791320-mRNA-1
chr5_3 CDS 2248281 2248409 2248281 ID=Msa0791320-mRNA-1:cds;Parent=Msa0791320-mRNA-1
chr5_3 CDS 2249697 2249714 2249697 ID=Msa0791320-mRNA-1:cds;Parent=Msa0791320-mRNA-1
chr5_3 three_prime_UTR 2249715 2250029 2249715 ID=Msa0791320-mRNA-1:three_prime_utr;Parent=Msa0791320-mRNA-1
Gene Sequence

>Msa0791320

CTTCCACACGACACCGTTTCCGTTACTGAGGACGGTGTTGGTAGGTTTAATTCGAGTTCTAAAGGTAGGGTTTGTTTTGGAGTTAACCGTACGGTGAGTTTAACTCCGATCATTACTTTGTCTCCGGTTACCGATTCGAAGTTTAAGTTTAGTTATGTTGCTTGGGTTATCAAGTGTTTGGAGGGGTTGAATGAGGTTGTGAGGGAAGGGTTAGGTTTGATTCTAGAAGCTTCTGTGAGGCAGAGTAGGTTGTGTAGGGTTTATGGGTTGTGGAGTGAGGTTGTTGGTGGTAGTCTGTATTTGGTGTGTGAGAGGCAATGTGGTAGGGTATTGGAGAAACATGGTGGATTGATGAACGGGGGTGGTTTGAAATTGGATAAAGATGGGTTTTTTAGTTTTGGAATGATTGCTAAGGGAGTTATTGAAGCAGTGATTGCTTTGAATTTGGAAGGTTTGGTTGCTGGATGTTTGGGAATTTCGTGTTTCTATTTTGACGAGCTTGGTGGGGTTTGTATTGATTTGAATGAGGTGTTGGTGATGGGAAGGAAGCTTATGGATCAGGTTTCTTGTGGCACGGGTGATGAACCATCACACGAATCAATGTGTACGGAATGTTTGGATCTAGAGAATGAGCTTTTTGTTAGCCCTGAGGTTTTGTCTAAGTTTTTGAACAAGAGGGTTGTTAATCCAGAGAGCGGGGATTCGAGATATCCAATTGGGTTTGGCTCGGATGTATGGTCGTTGGCTTGTGTGTTGCTGCGGGTTCTTATTGGAAACAAACTCCCTCGGATTACCTTTGAAATGAGTGAAGGGATTGGTCTTGATGTTTCGGCTAGTTATATTTCTTGGGTGGAGAAAGTTAGTTTTGTTTTGGAAGAAAAAATTGGCTCTGAATACCTATCACTTAAGCAGACTCTTTGCCAGTGTCTGGACATCAATCCGGAAAATCGTTCAGATGTTGTGGATGTAAGGAAATCCATTCAGGATTTGTTAGTCAAACACCAATTTGTGTTTTTGGGTGATTCGGAGCTTACGGTAAATAGGAACAACACAGGTCACACCGTAATTCTTGCCAAGTTGTGTCAGTTGCTCGAGGAAAGTTCTAAGGAGCCGAGAGAACACGAATTGCAGGCAAAAGAAGATGGTGGTCAACCTGATATTCTTCAGAGTGTGGAGAATATATCTGATGAAGACTTCACTGCTAGCTTATCTAAAGGAATGATTGAGCTTAAAGATCTGCAAGGCCATCTTGGTTGTATCACTGGATTAGCTGTAGGAGGGGGATATCTGTTTAGCTCCTCTTTTGATAAAACTGTCCGTGTATGGTCCTTGCAGGACTTTTCTCATTTACACACATTTAGAGGTCATGAGAATAAAGTCATGGCTCTAGTTTATGTTGATGACGAAGAACAATTGTGTATAAGTGGTGACAGTGGCGGAGGCATATTTGTCTGGGGGATTGATGCACCTCTTAGTCAAGATCCCTTGAGGAAATGGTATGAGAAGAAGGATTGGCGCTTTAGTGGTATCCATTCCTTGACTGCTTTTGGAAATCTTCTCTACACTGGAAGTGGAGATAGAACAATCAAAGCTTGGTCATTGAAGGATGGAACTTTGATGTGCACAATGGATGGCCACAAATCTGTAGTTTCCACACTTTCAGTATGTGATGAGGTTCTTTACAGTGGTAGTTGGGATGGAACCGTTCGATTGTGGAGTCTTAATGATCATAGCCCGTTGGTGGTGCTAGGGGAAGATCTTCCTGGAGAGACGAAGTCTATCCTGGCTATTACTGCCAGTAGGGATTTGCTGGTTGCAGCATATGAGAATGGTTGCATAAAGGTCTGGAGAAATGACGTGTTCCTGAGTTCCAAAACATTGCATAATGGTGCCATTTTTGCTATGAGTCTGCAGGGAAAATGGCTTTATACAGGAGGTTGGGACAAAAATGTTAATATACAGGAATTATCAGGAGATGAGTTAGAACTGACCGTCAACGCATTTGGATCCATTCCTTCCAGTTCTGTTGTGACAGCTATGTTATGCAGCCAAGGAAAACTTTATATTGGATATGGTGACAAGTCTATTAAGGTTTATCGTGCTAAATAG
Protein sequence

>Msa0791320

LPHDTVSVTEDGVGRFNSSSKGRVCFGVNRTVSLTPIITLSPVTDSKFKFSYVAWVIKCLEGLNEVVREGLGLILEASVRQSRLCRVYGLWSEVVGGSLYLVCERQCGRVLEKHGGLMNGGGLKLDKDGFFSFGMIAKGVIEAVIALNLEGLVAGCLGISCFYFDELGGVCIDLNEVLVMGRKLMDQVSCGTGDEPSHESMCTECLDLENELFVSPEVLSKFLNKRVVNPESGDSRYPIGFGSDVWSLACVLLRVLIGNKLPRITFEMSEGIGLDVSASYISWVEKVSFVLEEKIGSEYLSLKQTLCQCLDINPENRSDVVDVRKSIQDLLVKHQFVFLGDSELTVNRNNTGHTVILAKLCQLLEESSKEPREHELQAKEDGGQPDILQSVENISDEDFTASLSKGMIELKDLQGHLGCITGLAVGGGYLFSSSFDKTVRVWSLQDFSHLHTFRGHENKVMALVYVDDEEQLCISGDSGGGIFVWGIDAPLSQDPLRKWYEKKDWRFSGIHSLTAFGNLLYTGSGDRTIKAWSLKDGTLMCTMDGHKSVVSTLSVCDEVLYSGSWDGTVRLWSLNDHSPLVVLGEDLPGETKSILAITASRDLLVAAYENGCIKVWRNDVFLSSKTLHNGAIFAMSLQGKWLYTGGWDKNVNIQELSGDELELTVNAFGSIPSSSVVTAMLCSQGKLYIGYGDKSIKVYRAK*