Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0795150 | A0A392RYG2 | 64.516 | 62 | 21 | 1 | 9 | 69 | 1 | 62 | 2.95e-16 | 79.0 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0795150 | Msa0795660 | 0.822689 | 2.070822e-53 | -8.615850e-47 |
| Msa0795150 | Msa0934050 | 0.807308 | 5.386180e-50 | -8.615850e-47 |
| Msa0795150 | Msa1082500 | 0.804984 | 1.661727e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0795150 | MtrunA17_Chr8g0375221 | 66.667 | 57 | 19 | 0 | 9 | 65 | 146 | 202 | 8.54e-20 | 83.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 31 sgRNAs with CRISPR-Local
Find 520 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTGATTCGGATGTTGTTTA+TGG | 0.242384 | 5_3:+7040368 | Msa0795150:CDS |
| AAGGAGAACTGAATTTCTTT+TGG | 0.310310 | 5_3:+7040438 | Msa0795150:CDS |
| CAGTGCATGGCAGGCAGATA+TGG | 0.350061 | 5_3:+7043305 | Msa0795150:CDS |
| AGAGGAGGACGAGAGTGATT+CGG | 0.435616 | 5_3:+7040411 | Msa0795150:CDS |
| ATCTGCCTGCCATGCACTGA+TGG | 0.447640 | 5_3:-7043301 | None:intergenic |
| TATGGAAGGTGGAGAAGAAT+GGG | 0.449027 | 5_3:+7043323 | Msa0795150:CDS |
| TGTGATTGAATTGGTTGATT+CGG | 0.459763 | 5_3:+7040355 | Msa0795150:CDS |
| ACATGGAAGGTGGAAAAGAA+TGG | 0.461481 | 5_3:+7043381 | Msa0795150:CDS |
| TGACGATCATGTGATTGAAT+TGG | 0.462645 | 5_3:+7040346 | Msa0795150:CDS |
| ACGAGAGTGATTCGGTTTGA+AGG | 0.466244 | 5_3:+7040419 | Msa0795150:CDS |
| ATATGGAAGGTGGAGAAGAA+TGG | 0.488911 | 5_3:+7043322 | Msa0795150:CDS |
| ATGTGGTTCAAGTTTGCCCT+AGG | 0.495125 | 5_3:+7039310 | Msa0795150:CDS |
| GGACTATATCAGAAGAGAAT+GGG | 0.513240 | 5_3:+7040558 | Msa0795150:intron |
| AGGACTATATCAGAAGAGAA+TGG | 0.514597 | 5_3:+7040557 | Msa0795150:intron |
| TATTTCCATCAGTGCATGGC+AGG | 0.533960 | 5_3:+7043296 | Msa0795150:CDS |
| TTTGCAAATTAAATCAGCTA+GGG | 0.538479 | 5_3:+7040289 | Msa0795150:CDS |
| CATGGAAGGTGGAAAAGAAT+GGG | 0.546231 | 5_3:+7043382 | Msa0795150:CDS |
| CTGTTATTTCCATCAGTGCA+TGG | 0.564950 | 5_3:+7043292 | Msa0795150:CDS |
| ATCAAGATAAATTGAACGAG+AGG | 0.598955 | 5_3:+7040393 | Msa0795150:CDS |
| AAATTAAATCAGCTAGGGCG+AGG | 0.607947 | 5_3:+7040294 | Msa0795150:CDS |
| AAGATAAATTGAACGAGAGG+AGG | 0.615063 | 5_3:+7040396 | Msa0795150:CDS |
| TGATTATAACTCGACATGGA+AGG | 0.621831 | 5_3:+7043368 | Msa0795150:CDS |
| TTATAACTCGACATGGAAGG+TGG | 0.633492 | 5_3:+7043371 | Msa0795150:CDS |
| CTTCAACAGAGAAGAGGACA+AGG | 0.634132 | 5_3:+7040584 | Msa0795150:CDS |
| TGGCAGGCAGATATGGAAGG+TGG | 0.634357 | 5_3:+7043312 | Msa0795150:CDS |
| GGGCAACTTCAACAGAGAAG+AGG | 0.637684 | 5_3:+7040578 | Msa0795150:CDS |
| GCATGGCAGGCAGATATGGA+AGG | 0.642059 | 5_3:+7043309 | Msa0795150:CDS |
| TATAATCACTTAGCACCGCA+CGG | 0.697750 | 5_3:-7043353 | None:intergenic |
| TAAGTGATTATAACTCGACA+TGG | 0.702798 | 5_3:+7043364 | Msa0795150:CDS |
| AGAATGGGAACTATACTGTG+CGG | 0.748551 | 5_3:+7043397 | Msa0795150:CDS |
| AGAATGGGAAATATACCGTG+CGG | 0.798798 | 5_3:+7043338 | Msa0795150:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTGTTCATTTTTTTTATAA+GGG | - | chr5_3:7039771-7039790 | None:intergenic | 10.0% |
| !!! | TTTTGTTCATTTTTTTTATA+AGG | - | chr5_3:7039772-7039791 | None:intergenic | 10.0% |
| !! | AAAATTCAAATATAATAAAG+AGG | - | chr5_3:7041007-7041026 | None:intergenic | 10.0% |
| !!! | TTTATTATATTTGAATTTTG+TGG | + | chr5_3:7041008-7041027 | Msa0795150:intron | 10.0% |
| !! | ATATAAATATATAGACTAAA+TGG | + | chr5_3:7041742-7041761 | Msa0795150:intron | 10.0% |
| !! | TATAAATATATAGACTAAAT+GGG | + | chr5_3:7041743-7041762 | Msa0795150:intron | 10.0% |
| !! | ATTATAAAAAAATTGTTAGT+TGG | - | chr5_3:7042144-7042163 | None:intergenic | 10.0% |
| !!! | TTTGTTCATTTTTTTTATAA+GGG | - | chr5_3:7039771-7039790 | None:intergenic | 10.0% |
| !!! | TTTTGTTCATTTTTTTTATA+AGG | - | chr5_3:7039772-7039791 | None:intergenic | 10.0% |
| !! | AAAATTCAAATATAATAAAG+AGG | - | chr5_3:7041007-7041026 | None:intergenic | 10.0% |
| !!! | TTTATTATATTTGAATTTTG+TGG | + | chr5_3:7041008-7041027 | Msa0795150:intron | 10.0% |
| !! | ATATAAATATATAGACTAAA+TGG | + | chr5_3:7041742-7041761 | Msa0795150:intron | 10.0% |
| !! | TATAAATATATAGACTAAAT+GGG | + | chr5_3:7041743-7041762 | Msa0795150:intron | 10.0% |
| !! | ATTATAAAAAAATTGTTAGT+TGG | - | chr5_3:7042144-7042163 | None:intergenic | 10.0% |
| !!! | ATTTATGTATATGTATTTTG+TGG | - | chr5_3:7039647-7039666 | None:intergenic | 15.0% |
| !! | AAAATACATATACATAAATG+TGG | + | chr5_3:7039648-7039667 | Msa0795150:intron | 15.0% |
| !! | AAATACATATACATAAATGT+GGG | + | chr5_3:7039649-7039668 | Msa0795150:intron | 15.0% |
| !!! | ATTTAATGTTTTATTGGTTT+AGG | + | chr5_3:7040474-7040493 | Msa0795150:intron | 15.0% |
| !!! | TTTAATGTTTTATTGGTTTA+GGG | + | chr5_3:7040475-7040494 | Msa0795150:intron | 15.0% |
| !!! | CATTTTATTTAAAATTTGCA+AGG | + | chr5_3:7041354-7041373 | Msa0795150:intron | 15.0% |
| !!! | ACAATTTTTTTATAATGATG+TGG | + | chr5_3:7042148-7042167 | Msa0795150:intron | 15.0% |
| !!! | CAATTTTTTTATAATGATGT+GGG | + | chr5_3:7042149-7042168 | Msa0795150:intron | 15.0% |
| !!! | AGGTATTTACATTTTTTATT+CGG | + | chr5_3:7042235-7042254 | Msa0795150:intron | 15.0% |
| !!! | GACTTTTTAGTATTATTTAT+TGG | - | chr5_3:7042973-7042992 | None:intergenic | 15.0% |
| !!! | ACTATATTTTGAATAATAAC+TGG | - | chr5_3:7043013-7043032 | None:intergenic | 15.0% |
| !! | TTTCATTGATATTTGTAATT+AGG | - | chr5_3:7043068-7043087 | None:intergenic | 15.0% |
| !!! | ATTTATGTATATGTATTTTG+TGG | - | chr5_3:7039647-7039666 | None:intergenic | 15.0% |
| !! | AAAATACATATACATAAATG+TGG | + | chr5_3:7039648-7039667 | Msa0795150:intron | 15.0% |
| !! | AAATACATATACATAAATGT+GGG | + | chr5_3:7039649-7039668 | Msa0795150:intron | 15.0% |
| !!! | ATTTAATGTTTTATTGGTTT+AGG | + | chr5_3:7040474-7040493 | Msa0795150:intron | 15.0% |
| !!! | TTTAATGTTTTATTGGTTTA+GGG | + | chr5_3:7040475-7040494 | Msa0795150:intron | 15.0% |
| !!! | CATTTTATTTAAAATTTGCA+AGG | + | chr5_3:7041354-7041373 | Msa0795150:intron | 15.0% |
| !!! | ACAATTTTTTTATAATGATG+TGG | + | chr5_3:7042148-7042167 | Msa0795150:intron | 15.0% |
| !!! | CAATTTTTTTATAATGATGT+GGG | + | chr5_3:7042149-7042168 | Msa0795150:intron | 15.0% |
| !!! | AGGTATTTACATTTTTTATT+CGG | + | chr5_3:7042235-7042254 | Msa0795150:intron | 15.0% |
| !!! | GACTTTTTAGTATTATTTAT+TGG | - | chr5_3:7042973-7042992 | None:intergenic | 15.0% |
| !!! | ACTATATTTTGAATAATAAC+TGG | - | chr5_3:7043013-7043032 | None:intergenic | 15.0% |
| !! | TTTCATTGATATTTGTAATT+AGG | - | chr5_3:7043068-7043087 | None:intergenic | 15.0% |
| !! | AATACATATACATAAATGTG+GGG | + | chr5_3:7039650-7039669 | Msa0795150:intron | 20.0% |
| !!! | AATGAAAAAAATTTGCCTTT+TGG | + | chr5_3:7039683-7039702 | Msa0795150:intron | 20.0% |
| !!! | ATGAAAAAAATTTGCCTTTT+GGG | + | chr5_3:7039684-7039703 | Msa0795150:intron | 20.0% |
| !! | TTGATTACTATTACTATTAC+AGG | + | chr5_3:7039983-7040002 | Msa0795150:intron | 20.0% |
| !! | TGATTACTATTACTATTACA+GGG | + | chr5_3:7039984-7040003 | Msa0795150:intron | 20.0% |
| !! | ATTTAAAGGAAAAAAAGTTG+TGG | + | chr5_3:7040012-7040031 | Msa0795150:intron | 20.0% |
| !! | TTTAAAGGAAAAAAAGTTGT+GGG | + | chr5_3:7040013-7040032 | Msa0795150:intron | 20.0% |
| !! | TTCAAATATAATAAAGAGGA+AGG | - | chr5_3:7041003-7041022 | None:intergenic | 20.0% |
| !!! | TGTTTTTAGAGATTGAAAAT+TGG | + | chr5_3:7041053-7041072 | Msa0795150:intron | 20.0% |
| !! | TTTGTTAAAATGTAGCAAAA+GGG | - | chr5_3:7041266-7041285 | None:intergenic | 20.0% |
| !! | AATGAGTGTAATAACAAAAT+CGG | + | chr5_3:7041309-7041328 | Msa0795150:intron | 20.0% |
| !! | CTGAGTTAAACAAAATAAAT+AGG | - | chr5_3:7042217-7042236 | None:intergenic | 20.0% |
| !!! | CTATTTATTTTGTTTAACTC+AGG | + | chr5_3:7042215-7042234 | Msa0795150:intron | 20.0% |
| !! | ATAAATCCTTAACACTATAA+AGG | - | chr5_3:7042773-7042792 | None:intergenic | 20.0% |
| !! | AATACATATACATAAATGTG+GGG | + | chr5_3:7039650-7039669 | Msa0795150:intron | 20.0% |
| !!! | AATGAAAAAAATTTGCCTTT+TGG | + | chr5_3:7039683-7039702 | Msa0795150:intron | 20.0% |
| !!! | ATGAAAAAAATTTGCCTTTT+GGG | + | chr5_3:7039684-7039703 | Msa0795150:intron | 20.0% |
| !! | TTGATTACTATTACTATTAC+AGG | + | chr5_3:7039983-7040002 | Msa0795150:intron | 20.0% |
| !! | TGATTACTATTACTATTACA+GGG | + | chr5_3:7039984-7040003 | Msa0795150:intron | 20.0% |
| !! | ATTTAAAGGAAAAAAAGTTG+TGG | + | chr5_3:7040012-7040031 | Msa0795150:intron | 20.0% |
| !! | TTTAAAGGAAAAAAAGTTGT+GGG | + | chr5_3:7040013-7040032 | Msa0795150:intron | 20.0% |
| !! | TTCAAATATAATAAAGAGGA+AGG | - | chr5_3:7041003-7041022 | None:intergenic | 20.0% |
| !!! | TGTTTTTAGAGATTGAAAAT+TGG | + | chr5_3:7041053-7041072 | Msa0795150:intron | 20.0% |
| !! | TTTGTTAAAATGTAGCAAAA+GGG | - | chr5_3:7041266-7041285 | None:intergenic | 20.0% |
| !! | AATGAGTGTAATAACAAAAT+CGG | + | chr5_3:7041309-7041328 | Msa0795150:intron | 20.0% |
| !! | CTGAGTTAAACAAAATAAAT+AGG | - | chr5_3:7042217-7042236 | None:intergenic | 20.0% |
| !!! | CTATTTATTTTGTTTAACTC+AGG | + | chr5_3:7042215-7042234 | Msa0795150:intron | 20.0% |
| !! | ATAAATCCTTAACACTATAA+AGG | - | chr5_3:7042773-7042792 | None:intergenic | 20.0% |
| ! | ATACATATACATAAATGTGG+GGG | + | chr5_3:7039651-7039670 | Msa0795150:intron | 25.0% |
| !!! | ATAGGATTTTTCCTGTTTTT+GGG | + | chr5_3:7039864-7039883 | Msa0795150:intron | 25.0% |
| ! | TTTCAAATGTCACAGTTAAT+TGG | + | chr5_3:7040225-7040244 | Msa0795150:intron | 25.0% |
| !! | TTTTGCAAATTAAATCAGCT+AGG | + | chr5_3:7040288-7040307 | Msa0795150:CDS | 25.0% |
| ! | TTTGCAAATTAAATCAGCTA+GGG | + | chr5_3:7040289-7040308 | Msa0795150:CDS | 25.0% |
| ! | CAAAGAAATCCAAACAAAAA+AGG | - | chr5_3:7041035-7041054 | None:intergenic | 25.0% |
| !! | TTTTACTATATCAGAATGTG+TGG | + | chr5_3:7041103-7041122 | Msa0795150:intron | 25.0% |
| ! | CTTTGTTAAAATGTAGCAAA+AGG | - | chr5_3:7041267-7041286 | None:intergenic | 25.0% |
| !!! | CTTTTGCTACATTTTAACAA+AGG | + | chr5_3:7041265-7041284 | Msa0795150:intron | 25.0% |
| ! | AATAACAAAATCGGTTATGA+TGG | + | chr5_3:7041318-7041337 | Msa0795150:intron | 25.0% |
| ! | ATAACAAAATCGGTTATGAT+GGG | + | chr5_3:7041319-7041338 | Msa0795150:intron | 25.0% |
| !!! | CTTGCTTTGTTTTTGTTTTT+AGG | + | chr5_3:7041395-7041414 | Msa0795150:intron | 25.0% |
| !!! | TTTTTTAGTTTGTCATCACA+TGG | + | chr5_3:7041808-7041827 | Msa0795150:intron | 25.0% |
| !!! | TTTTTAGTTTGTCATCACAT+GGG | + | chr5_3:7041809-7041828 | Msa0795150:intron | 25.0% |
| !! | TTTCTCTCTTTTAGCATTTA+TGG | + | chr5_3:7042015-7042034 | Msa0795150:intron | 25.0% |
| !!! | AACTTTAAAATGTGAAGTGA+AGG | + | chr5_3:7042637-7042656 | Msa0795150:intron | 25.0% |
| !!! | ACTTTAAAATGTGAAGTGAA+GGG | + | chr5_3:7042638-7042657 | Msa0795150:intron | 25.0% |
| ! | TATCATATGTAAAAAGCTAG+TGG | + | chr5_3:7042685-7042704 | Msa0795150:intron | 25.0% |
| ! | ATCAATATTTGACATGATAG+TGG | - | chr5_3:7042829-7042848 | None:intergenic | 25.0% |
| !! | TCATTGACATTGATTACTAT+TGG | - | chr5_3:7043037-7043056 | None:intergenic | 25.0% |
| ! | GTAATCAATGTCAATGAAAT+TGG | + | chr5_3:7043040-7043059 | Msa0795150:intron | 25.0% |
| ! | TCATTTGCTTGTAAATATGA+AGG | + | chr5_3:7043195-7043214 | Msa0795150:intron | 25.0% |
| ! | ATACATATACATAAATGTGG+GGG | + | chr5_3:7039651-7039670 | Msa0795150:intron | 25.0% |
| !!! | ATAGGATTTTTCCTGTTTTT+GGG | + | chr5_3:7039864-7039883 | Msa0795150:intron | 25.0% |
| ! | TTTCAAATGTCACAGTTAAT+TGG | + | chr5_3:7040225-7040244 | Msa0795150:intron | 25.0% |
| !! | TTTTGCAAATTAAATCAGCT+AGG | + | chr5_3:7040288-7040307 | Msa0795150:CDS | 25.0% |
| ! | TTTGCAAATTAAATCAGCTA+GGG | + | chr5_3:7040289-7040308 | Msa0795150:CDS | 25.0% |
| ! | CAAAGAAATCCAAACAAAAA+AGG | - | chr5_3:7041035-7041054 | None:intergenic | 25.0% |
| !! | TTTTACTATATCAGAATGTG+TGG | + | chr5_3:7041103-7041122 | Msa0795150:intron | 25.0% |
| ! | CTTTGTTAAAATGTAGCAAA+AGG | - | chr5_3:7041267-7041286 | None:intergenic | 25.0% |
| !!! | CTTTTGCTACATTTTAACAA+AGG | + | chr5_3:7041265-7041284 | Msa0795150:intron | 25.0% |
| ! | AATAACAAAATCGGTTATGA+TGG | + | chr5_3:7041318-7041337 | Msa0795150:intron | 25.0% |
| ! | ATAACAAAATCGGTTATGAT+GGG | + | chr5_3:7041319-7041338 | Msa0795150:intron | 25.0% |
| !!! | CTTGCTTTGTTTTTGTTTTT+AGG | + | chr5_3:7041395-7041414 | Msa0795150:intron | 25.0% |
| !!! | TTTTTTAGTTTGTCATCACA+TGG | + | chr5_3:7041808-7041827 | Msa0795150:intron | 25.0% |
| !!! | TTTTTAGTTTGTCATCACAT+GGG | + | chr5_3:7041809-7041828 | Msa0795150:intron | 25.0% |
| !! | TTTCTCTCTTTTAGCATTTA+TGG | + | chr5_3:7042015-7042034 | Msa0795150:intron | 25.0% |
| !!! | AACTTTAAAATGTGAAGTGA+AGG | + | chr5_3:7042637-7042656 | Msa0795150:intron | 25.0% |
| !!! | ACTTTAAAATGTGAAGTGAA+GGG | + | chr5_3:7042638-7042657 | Msa0795150:intron | 25.0% |
| ! | TATCATATGTAAAAAGCTAG+TGG | + | chr5_3:7042685-7042704 | Msa0795150:intron | 25.0% |
| ! | ATCAATATTTGACATGATAG+TGG | - | chr5_3:7042829-7042848 | None:intergenic | 25.0% |
| !! | TCATTGACATTGATTACTAT+TGG | - | chr5_3:7043037-7043056 | None:intergenic | 25.0% |
| ! | GTAATCAATGTCAATGAAAT+TGG | + | chr5_3:7043040-7043059 | Msa0795150:intron | 25.0% |
| ! | TCATTTGCTTGTAAATATGA+AGG | + | chr5_3:7043195-7043214 | Msa0795150:intron | 25.0% |
| AAAATCGCAATCAAAATCGA+AGG | + | chr5_3:7039469-7039488 | Msa0795150:intron | 30.0% | |
| ! | AAATCGAAGGATTTTACTCA+AGG | + | chr5_3:7039482-7039501 | Msa0795150:intron | 30.0% |
| ! | GACTTTTGTAGAATCGATAT+AGG | + | chr5_3:7039504-7039523 | Msa0795150:intron | 30.0% |
| TAAAATCGCAATCAAAATCG+AGG | + | chr5_3:7039468-7039487 | Msa0795150:intron | 30.0% | |
| !! | CCTTTTGGGTATTTATAGAA+CGG | + | chr5_3:7039698-7039717 | Msa0795150:intron | 30.0% |
| !! | CTTTTGGGTATTTATAGAAC+GGG | + | chr5_3:7039699-7039718 | Msa0795150:intron | 30.0% |
| !!! | AGGATTTTGATGGATTTTGA+AGG | - | chr5_3:7039796-7039815 | None:intergenic | 30.0% |
| ! | GATAGGATTTTTCCTGTTTT+TGG | + | chr5_3:7039863-7039882 | Msa0795150:intron | 30.0% |
| ATTACAGGGATCGTATTTAA+AGG | + | chr5_3:7039998-7040017 | Msa0795150:intron | 30.0% | |
| TTAGGAAAATAGAGCAGATA+CGG | - | chr5_3:7040068-7040087 | None:intergenic | 30.0% | |
| TGTGATTGAATTGGTTGATT+CGG | + | chr5_3:7040355-7040374 | Msa0795150:CDS | 30.0% | |
| ATCAAGATAAATTGAACGAG+AGG | + | chr5_3:7040393-7040412 | Msa0795150:CDS | 30.0% | |
| ! | AAGGAGAACTGAATTTCTTT+TGG | + | chr5_3:7040438-7040457 | Msa0795150:CDS | 30.0% |
| ! | TTTAGGGTCATATGATGTAT+TGG | + | chr5_3:7040491-7040510 | Msa0795150:intron | 30.0% |
| TCTTATTGTATAACTAGCTC+TGG | - | chr5_3:7040613-7040632 | None:intergenic | 30.0% | |
| ! | ATCTATTTTCTATAGCTCAG+TGG | + | chr5_3:7040968-7040987 | Msa0795150:intron | 30.0% |
| !! | TTTTGTGGACCTTTTTTGTT+TGG | + | chr5_3:7041023-7041042 | Msa0795150:intron | 30.0% |
| ! | GAATACAAGCACTATTTCTT+AGG | - | chr5_3:7041129-7041148 | None:intergenic | 30.0% |
| ! | GTATTCTATTTGTAGTTCTG+TGG | + | chr5_3:7041143-7041162 | Msa0795150:intron | 30.0% |
| AAAGGGATATCTGGAAAATT+TGG | - | chr5_3:7041523-7041542 | None:intergenic | 30.0% | |
| CTAGTAAAATATTTCCGTAG+TGG | - | chr5_3:7041642-7041661 | None:intergenic | 30.0% | |
| !! | AATATTTTACTAGCTTGCGT+TGG | + | chr5_3:7041649-7041668 | Msa0795150:intron | 30.0% |
| ATGAGCTAACGTGAATTTAA+TGG | - | chr5_3:7041912-7041931 | None:intergenic | 30.0% | |
| !!! | TCGTGATAGGTTTTGATTTA+GGG | + | chr5_3:7042285-7042304 | Msa0795150:intron | 30.0% |
| TTCTTGTGCAGTTTATAACA+TGG | + | chr5_3:7042435-7042454 | Msa0795150:intron | 30.0% | |
| !! | TTTCCTCCTTTTTGATTCAA+AGG | + | chr5_3:7042491-7042510 | Msa0795150:intron | 30.0% |
| TGCCTAGAGATAATTGTATA+AGG | + | chr5_3:7042739-7042758 | Msa0795150:intron | 30.0% | |
| GCCTAGAGATAATTGTATAA+GGG | + | chr5_3:7042740-7042759 | Msa0795150:intron | 30.0% | |
| TCCCTTATACAATTATCTCT+AGG | - | chr5_3:7042744-7042763 | None:intergenic | 30.0% | |
| TTCAGTCCTTTATAGTGTTA+AGG | + | chr5_3:7042764-7042783 | Msa0795150:intron | 30.0% | |
| AGCAAATGATGCATATGATT+GGG | - | chr5_3:7043184-7043203 | None:intergenic | 30.0% | |
| AAGCAAATGATGCATATGAT+TGG | - | chr5_3:7043185-7043204 | None:intergenic | 30.0% | |
| ! | TGTAAATATGAAGGTGTAGA+AGG | + | chr5_3:7043204-7043223 | Msa0795150:intron | 30.0% |
| ! | TATGATTATCAAAGAGGTGT+TGG | - | chr5_3:7043249-7043268 | None:intergenic | 30.0% |
| CAGCAATATGATTATCAAAG+AGG | - | chr5_3:7043255-7043274 | None:intergenic | 30.0% | |
| TAAGTGATTATAACTCGACA+TGG | + | chr5_3:7043364-7043383 | Msa0795150:CDS | 30.0% | |
| AAAATCGCAATCAAAATCGA+AGG | + | chr5_3:7039469-7039488 | Msa0795150:intron | 30.0% | |
| ! | AAATCGAAGGATTTTACTCA+AGG | + | chr5_3:7039482-7039501 | Msa0795150:intron | 30.0% |
| ! | GACTTTTGTAGAATCGATAT+AGG | + | chr5_3:7039504-7039523 | Msa0795150:intron | 30.0% |
| TAAAATCGCAATCAAAATCG+AGG | + | chr5_3:7039468-7039487 | Msa0795150:intron | 30.0% | |
| !! | CCTTTTGGGTATTTATAGAA+CGG | + | chr5_3:7039698-7039717 | Msa0795150:intron | 30.0% |
| !! | CTTTTGGGTATTTATAGAAC+GGG | + | chr5_3:7039699-7039718 | Msa0795150:intron | 30.0% |
| !!! | AGGATTTTGATGGATTTTGA+AGG | - | chr5_3:7039796-7039815 | None:intergenic | 30.0% |
| ! | GATAGGATTTTTCCTGTTTT+TGG | + | chr5_3:7039863-7039882 | Msa0795150:intron | 30.0% |
| ATTACAGGGATCGTATTTAA+AGG | + | chr5_3:7039998-7040017 | Msa0795150:intron | 30.0% | |
| TTAGGAAAATAGAGCAGATA+CGG | - | chr5_3:7040068-7040087 | None:intergenic | 30.0% | |
| TGTGATTGAATTGGTTGATT+CGG | + | chr5_3:7040355-7040374 | Msa0795150:CDS | 30.0% | |
| ATCAAGATAAATTGAACGAG+AGG | + | chr5_3:7040393-7040412 | Msa0795150:CDS | 30.0% | |
| ! | AAGGAGAACTGAATTTCTTT+TGG | + | chr5_3:7040438-7040457 | Msa0795150:CDS | 30.0% |
| ! | TTTAGGGTCATATGATGTAT+TGG | + | chr5_3:7040491-7040510 | Msa0795150:intron | 30.0% |
| TCTTATTGTATAACTAGCTC+TGG | - | chr5_3:7040613-7040632 | None:intergenic | 30.0% | |
| ! | ATCTATTTTCTATAGCTCAG+TGG | + | chr5_3:7040968-7040987 | Msa0795150:intron | 30.0% |
| !! | TTTTGTGGACCTTTTTTGTT+TGG | + | chr5_3:7041023-7041042 | Msa0795150:intron | 30.0% |
| ! | GAATACAAGCACTATTTCTT+AGG | - | chr5_3:7041129-7041148 | None:intergenic | 30.0% |
| ! | GTATTCTATTTGTAGTTCTG+TGG | + | chr5_3:7041143-7041162 | Msa0795150:intron | 30.0% |
| AAAGGGATATCTGGAAAATT+TGG | - | chr5_3:7041523-7041542 | None:intergenic | 30.0% | |
| CTAGTAAAATATTTCCGTAG+TGG | - | chr5_3:7041642-7041661 | None:intergenic | 30.0% | |
| !! | AATATTTTACTAGCTTGCGT+TGG | + | chr5_3:7041649-7041668 | Msa0795150:intron | 30.0% |
| ATGAGCTAACGTGAATTTAA+TGG | - | chr5_3:7041912-7041931 | None:intergenic | 30.0% | |
| !!! | TCGTGATAGGTTTTGATTTA+GGG | + | chr5_3:7042285-7042304 | Msa0795150:intron | 30.0% |
| TTCTTGTGCAGTTTATAACA+TGG | + | chr5_3:7042435-7042454 | Msa0795150:intron | 30.0% | |
| !! | TTTCCTCCTTTTTGATTCAA+AGG | + | chr5_3:7042491-7042510 | Msa0795150:intron | 30.0% |
| TGCCTAGAGATAATTGTATA+AGG | + | chr5_3:7042739-7042758 | Msa0795150:intron | 30.0% | |
| GCCTAGAGATAATTGTATAA+GGG | + | chr5_3:7042740-7042759 | Msa0795150:intron | 30.0% | |
| TCCCTTATACAATTATCTCT+AGG | - | chr5_3:7042744-7042763 | None:intergenic | 30.0% | |
| TTCAGTCCTTTATAGTGTTA+AGG | + | chr5_3:7042764-7042783 | Msa0795150:intron | 30.0% | |
| AGCAAATGATGCATATGATT+GGG | - | chr5_3:7043184-7043203 | None:intergenic | 30.0% | |
| AAGCAAATGATGCATATGAT+TGG | - | chr5_3:7043185-7043204 | None:intergenic | 30.0% | |
| ! | TGTAAATATGAAGGTGTAGA+AGG | + | chr5_3:7043204-7043223 | Msa0795150:intron | 30.0% |
| ! | TATGATTATCAAAGAGGTGT+TGG | - | chr5_3:7043249-7043268 | None:intergenic | 30.0% |
| CAGCAATATGATTATCAAAG+AGG | - | chr5_3:7043255-7043274 | None:intergenic | 30.0% | |
| TAAGTGATTATAACTCGACA+TGG | + | chr5_3:7043364-7043383 | Msa0795150:CDS | 30.0% | |
| CTGTGCAAGGTTATCAAAAT+CGG | + | chr5_3:7039402-7039421 | Msa0795150:intron | 35.0% | |
| TGTGCAAGGTTATCAAAATC+GGG | + | chr5_3:7039403-7039422 | Msa0795150:intron | 35.0% | |
| GACTTTACTTCAAGTCGAAA+GGG | + | chr5_3:7039425-7039444 | Msa0795150:intron | 35.0% | |
| TCGATATAGGATAGCAAAGT+CGG | + | chr5_3:7039517-7039536 | Msa0795150:intron | 35.0% | |
| CCGTTCTATAAATACCCAAA+AGG | - | chr5_3:7039701-7039720 | None:intergenic | 35.0% | |
| ! | ATAAGGGTCAATTTTTGACC+CGG | - | chr5_3:7039755-7039774 | None:intergenic | 35.0% |
| ! | TCAAAATCGCAGGATTTTGA+TGG | - | chr5_3:7039806-7039825 | None:intergenic | 35.0% |
| ! | CAAAATCCTGCGATTTTGAA+TGG | + | chr5_3:7039807-7039826 | Msa0795150:intron | 35.0% |
| TGAAATCCATTCAAAATCGC+AGG | - | chr5_3:7039816-7039835 | None:intergenic | 35.0% | |
| !! | AGTCGCGTTTTTGATAACAA+TGG | + | chr5_3:7039952-7039971 | Msa0795150:intron | 35.0% |
| AGGAAAAAAAGTTGTGGGTA+CGG | + | chr5_3:7040018-7040037 | Msa0795150:intron | 35.0% | |
| ! | AGACATCGGTTACACTAATT+AGG | - | chr5_3:7040086-7040105 | None:intergenic | 35.0% |
| CGTGGCTACATAAAATTCAA+TGG | + | chr5_3:7040110-7040129 | Msa0795150:intron | 35.0% | |
| TGACGATCATGTGATTGAAT+TGG | + | chr5_3:7040346-7040365 | Msa0795150:CDS | 35.0% | |
| !! | GTTGATTCGGATGTTGTTTA+TGG | + | chr5_3:7040368-7040387 | Msa0795150:CDS | 35.0% |
| AAGATAAATTGAACGAGAGG+AGG | + | chr5_3:7040396-7040415 | Msa0795150:CDS | 35.0% | |
| AGGACTATATCAGAAGAGAA+TGG | + | chr5_3:7040557-7040576 | Msa0795150:intron | 35.0% | |
| GGACTATATCAGAAGAGAAT+GGG | + | chr5_3:7040558-7040577 | Msa0795150:intron | 35.0% | |
| GTTCACTTTGTGGTAGTTAA+TGG | + | chr5_3:7040640-7040659 | Msa0795150:intron | 35.0% | |
| AAATCTTGCCAACCAAAACA+GGG | - | chr5_3:7040827-7040846 | None:intergenic | 35.0% | |
| AAAATCTTGCCAACCAAAAC+AGG | - | chr5_3:7040828-7040847 | None:intergenic | 35.0% | |
| GAGTATTTCCTAAGCTCTAT+AGG | + | chr5_3:7040913-7040932 | Msa0795150:intron | 35.0% | |
| AAAATGTAGCAAAAGGGAAC+AGG | - | chr5_3:7041260-7041279 | None:intergenic | 35.0% | |
| ! | ATTTGCAAGGAGTACAACTT+TGG | + | chr5_3:7041367-7041386 | Msa0795150:intron | 35.0% |
| ATCATGCTTAAAGGGATATC+TGG | - | chr5_3:7041532-7041551 | None:intergenic | 35.0% | |
| ! | GCACTTCATTTTCCAAAATG+AGG | - | chr5_3:7041559-7041578 | None:intergenic | 35.0% |
| ! | ATGTCTAAATTGTGCCACTA+CGG | + | chr5_3:7041625-7041644 | Msa0795150:intron | 35.0% |
| !! | TTCACCTCAGTTTGATTTTC+TGG | + | chr5_3:7041852-7041871 | Msa0795150:intron | 35.0% |
| !! | ATAAATAGGTGCTGAGTGTT+TGG | - | chr5_3:7042203-7042222 | None:intergenic | 35.0% |
| TGTCAATTTGAACTCGTGAT+AGG | + | chr5_3:7042272-7042291 | Msa0795150:intron | 35.0% | |
| !!! | CTCGTGATAGGTTTTGATTT+AGG | + | chr5_3:7042284-7042303 | Msa0795150:intron | 35.0% |
| !!! | ATAGGTTTTGATTTAGGGAG+TGG | + | chr5_3:7042290-7042309 | Msa0795150:intron | 35.0% |
| !!! | AGGTTGTTTGGTTTTTGTGT+TGG | + | chr5_3:7042317-7042336 | Msa0795150:intron | 35.0% |
| TCCTGTCAAGCAAAAATTGA+TGG | - | chr5_3:7042347-7042366 | None:intergenic | 35.0% | |
| CAGTTTATAACATGGACAGT+CGG | + | chr5_3:7042443-7042462 | Msa0795150:intron | 35.0% | |
| !! | CTCCTTTTTGATTCAAAGGT+CGG | + | chr5_3:7042495-7042514 | Msa0795150:intron | 35.0% |
| !! | TCCTTTTTGATTCAAAGGTC+GGG | + | chr5_3:7042496-7042515 | Msa0795150:intron | 35.0% |
| AAAACAGAGCAAACACAAAC+TGG | - | chr5_3:7042524-7042543 | None:intergenic | 35.0% | |
| ! | AGTTTGTGTTTGCTCTGTTT+TGG | + | chr5_3:7042523-7042542 | Msa0795150:intron | 35.0% |
| ! | GTTTGTGTTTGCTCTGTTTT+GGG | + | chr5_3:7042524-7042543 | Msa0795150:intron | 35.0% |
| !! | GCAGGAAAAAGAGTTGTTTT+TGG | + | chr5_3:7042561-7042580 | Msa0795150:intron | 35.0% |
| !!! | AAGAGTTGTTTTTGGTCTGT+AGG | + | chr5_3:7042569-7042588 | Msa0795150:intron | 35.0% |
| !!! | AGAGTTGTTTTTGGTCTGTA+GGG | + | chr5_3:7042570-7042589 | Msa0795150:intron | 35.0% |
| AATGATGCATATGATTGGGA+GGG | - | chr5_3:7043180-7043199 | None:intergenic | 35.0% | |
| AAATGATGCATATGATTGGG+AGG | - | chr5_3:7043181-7043200 | None:intergenic | 35.0% | |
| TGATTATAACTCGACATGGA+AGG | + | chr5_3:7043368-7043387 | Msa0795150:CDS | 35.0% | |
| CTGTGCAAGGTTATCAAAAT+CGG | + | chr5_3:7039402-7039421 | Msa0795150:intron | 35.0% | |
| TGTGCAAGGTTATCAAAATC+GGG | + | chr5_3:7039403-7039422 | Msa0795150:intron | 35.0% | |
| GACTTTACTTCAAGTCGAAA+GGG | + | chr5_3:7039425-7039444 | Msa0795150:intron | 35.0% | |
| TCGATATAGGATAGCAAAGT+CGG | + | chr5_3:7039517-7039536 | Msa0795150:intron | 35.0% | |
| CCGTTCTATAAATACCCAAA+AGG | - | chr5_3:7039701-7039720 | None:intergenic | 35.0% | |
| ! | ATAAGGGTCAATTTTTGACC+CGG | - | chr5_3:7039755-7039774 | None:intergenic | 35.0% |
| ! | TCAAAATCGCAGGATTTTGA+TGG | - | chr5_3:7039806-7039825 | None:intergenic | 35.0% |
| ! | CAAAATCCTGCGATTTTGAA+TGG | + | chr5_3:7039807-7039826 | Msa0795150:intron | 35.0% |
| TGAAATCCATTCAAAATCGC+AGG | - | chr5_3:7039816-7039835 | None:intergenic | 35.0% | |
| !! | AGTCGCGTTTTTGATAACAA+TGG | + | chr5_3:7039952-7039971 | Msa0795150:intron | 35.0% |
| AGGAAAAAAAGTTGTGGGTA+CGG | + | chr5_3:7040018-7040037 | Msa0795150:intron | 35.0% | |
| ! | AGACATCGGTTACACTAATT+AGG | - | chr5_3:7040086-7040105 | None:intergenic | 35.0% |
| CGTGGCTACATAAAATTCAA+TGG | + | chr5_3:7040110-7040129 | Msa0795150:intron | 35.0% | |
| TGACGATCATGTGATTGAAT+TGG | + | chr5_3:7040346-7040365 | Msa0795150:CDS | 35.0% | |
| !! | GTTGATTCGGATGTTGTTTA+TGG | + | chr5_3:7040368-7040387 | Msa0795150:CDS | 35.0% |
| AAGATAAATTGAACGAGAGG+AGG | + | chr5_3:7040396-7040415 | Msa0795150:CDS | 35.0% | |
| AGGACTATATCAGAAGAGAA+TGG | + | chr5_3:7040557-7040576 | Msa0795150:intron | 35.0% | |
| GGACTATATCAGAAGAGAAT+GGG | + | chr5_3:7040558-7040577 | Msa0795150:intron | 35.0% | |
| GTTCACTTTGTGGTAGTTAA+TGG | + | chr5_3:7040640-7040659 | Msa0795150:intron | 35.0% | |
| AAATCTTGCCAACCAAAACA+GGG | - | chr5_3:7040827-7040846 | None:intergenic | 35.0% | |
| AAAATCTTGCCAACCAAAAC+AGG | - | chr5_3:7040828-7040847 | None:intergenic | 35.0% | |
| GAGTATTTCCTAAGCTCTAT+AGG | + | chr5_3:7040913-7040932 | Msa0795150:intron | 35.0% | |
| AAAATGTAGCAAAAGGGAAC+AGG | - | chr5_3:7041260-7041279 | None:intergenic | 35.0% | |
| ! | ATTTGCAAGGAGTACAACTT+TGG | + | chr5_3:7041367-7041386 | Msa0795150:intron | 35.0% |
| ATCATGCTTAAAGGGATATC+TGG | - | chr5_3:7041532-7041551 | None:intergenic | 35.0% | |
| ! | GCACTTCATTTTCCAAAATG+AGG | - | chr5_3:7041559-7041578 | None:intergenic | 35.0% |
| ! | ATGTCTAAATTGTGCCACTA+CGG | + | chr5_3:7041625-7041644 | Msa0795150:intron | 35.0% |
| !! | TTCACCTCAGTTTGATTTTC+TGG | + | chr5_3:7041852-7041871 | Msa0795150:intron | 35.0% |
| !! | ATAAATAGGTGCTGAGTGTT+TGG | - | chr5_3:7042203-7042222 | None:intergenic | 35.0% |
| TGTCAATTTGAACTCGTGAT+AGG | + | chr5_3:7042272-7042291 | Msa0795150:intron | 35.0% | |
| !!! | CTCGTGATAGGTTTTGATTT+AGG | + | chr5_3:7042284-7042303 | Msa0795150:intron | 35.0% |
| !!! | ATAGGTTTTGATTTAGGGAG+TGG | + | chr5_3:7042290-7042309 | Msa0795150:intron | 35.0% |
| !!! | AGGTTGTTTGGTTTTTGTGT+TGG | + | chr5_3:7042317-7042336 | Msa0795150:intron | 35.0% |
| TCCTGTCAAGCAAAAATTGA+TGG | - | chr5_3:7042347-7042366 | None:intergenic | 35.0% | |
| CAGTTTATAACATGGACAGT+CGG | + | chr5_3:7042443-7042462 | Msa0795150:intron | 35.0% | |
| !! | CTCCTTTTTGATTCAAAGGT+CGG | + | chr5_3:7042495-7042514 | Msa0795150:intron | 35.0% |
| !! | TCCTTTTTGATTCAAAGGTC+GGG | + | chr5_3:7042496-7042515 | Msa0795150:intron | 35.0% |
| AAAACAGAGCAAACACAAAC+TGG | - | chr5_3:7042524-7042543 | None:intergenic | 35.0% | |
| ! | AGTTTGTGTTTGCTCTGTTT+TGG | + | chr5_3:7042523-7042542 | Msa0795150:intron | 35.0% |
| ! | GTTTGTGTTTGCTCTGTTTT+GGG | + | chr5_3:7042524-7042543 | Msa0795150:intron | 35.0% |
| !! | GCAGGAAAAAGAGTTGTTTT+TGG | + | chr5_3:7042561-7042580 | Msa0795150:intron | 35.0% |
| !!! | AAGAGTTGTTTTTGGTCTGT+AGG | + | chr5_3:7042569-7042588 | Msa0795150:intron | 35.0% |
| !!! | AGAGTTGTTTTTGGTCTGTA+GGG | + | chr5_3:7042570-7042589 | Msa0795150:intron | 35.0% |
| AATGATGCATATGATTGGGA+GGG | - | chr5_3:7043180-7043199 | None:intergenic | 35.0% | |
| AAATGATGCATATGATTGGG+AGG | - | chr5_3:7043181-7043200 | None:intergenic | 35.0% | |
| TGATTATAACTCGACATGGA+AGG | + | chr5_3:7043368-7043387 | Msa0795150:CDS | 35.0% | |
| ! | TTCAAGTTTGCCCTAGGTTT+GGG | + | chr5_3:7039316-7039335 | Msa0795150:intron | 40.0% |
| TCTTCTTCAACCCAAACCTA+GGG | - | chr5_3:7039329-7039348 | None:intergenic | 40.0% | |
| TTCTTCTTCAACCCAAACCT+AGG | - | chr5_3:7039330-7039349 | None:intergenic | 40.0% | |
| GGACTTTACTTCAAGTCGAA+AGG | + | chr5_3:7039424-7039443 | Msa0795150:intron | 40.0% | |
| TCGAAAGGGAGTAGCAAAAT+CGG | + | chr5_3:7039439-7039458 | Msa0795150:intron | 40.0% | |
| CGATATAGGATAGCAAAGTC+GGG | + | chr5_3:7039518-7039537 | Msa0795150:intron | 40.0% | |
| GGTATTTATAGAACGGGTCA+TGG | + | chr5_3:7039705-7039724 | Msa0795150:intron | 40.0% | |
| AACGGGTCATGGATTCAAAT+CGG | + | chr5_3:7039716-7039735 | Msa0795150:intron | 40.0% | |
| AATCGGGTCAATTTACGAAC+CGG | + | chr5_3:7039733-7039752 | Msa0795150:intron | 40.0% | |
| ! | CGATTTTGTGCGACTTTGAT+AGG | + | chr5_3:7039846-7039865 | Msa0795150:intron | 40.0% |
| CATAGCAAAGTCCCAAAAAC+AGG | - | chr5_3:7039878-7039897 | None:intergenic | 40.0% | |
| !!! | CTGTTTTTGGGACTTTGCTA+TGG | + | chr5_3:7039876-7039895 | Msa0795150:intron | 40.0% |
| ! | AGTCGCAAAAACCAGGATTT+TGG | + | chr5_3:7039923-7039942 | Msa0795150:intron | 40.0% |
| ! | GTCGCAAAAACCAGGATTTT+GGG | + | chr5_3:7039924-7039943 | Msa0795150:intron | 40.0% |
| GGAAAAAAAGTTGTGGGTAC+GGG | + | chr5_3:7040019-7040038 | Msa0795150:intron | 40.0% | |
| AAATAGAGCAGATACGGACT+CGG | - | chr5_3:7040062-7040081 | None:intergenic | 40.0% | |
| TGCAGAATTGCAACAAGTAG+AGG | - | chr5_3:7040151-7040170 | None:intergenic | 40.0% | |
| AAATTAAATCAGCTAGGGCG+AGG | + | chr5_3:7040294-7040313 | Msa0795150:CDS | 40.0% | |
| ATTCTATGTTGTTCCTCGAC+AGG | + | chr5_3:7040537-7040556 | Msa0795150:intron | 40.0% | |
| TTTGAGCTGAAGATCTGCTA+TGG | + | chr5_3:7040874-7040893 | Msa0795150:intron | 40.0% | |
| CTATGGCTGCTATACATACT+TGG | + | chr5_3:7040891-7040910 | Msa0795150:intron | 40.0% | |
| CCTATAAGCCTATAGAGCTT+AGG | - | chr5_3:7040924-7040943 | None:intergenic | 40.0% | |
| CCTAAGCTCTATAGGCTTAT+AGG | + | chr5_3:7040921-7040940 | Msa0795150:intron | 40.0% | |
| GAGGCAACATCATGCTTAAA+GGG | - | chr5_3:7041540-7041559 | None:intergenic | 40.0% | |
| TGAGGCAACATCATGCTTAA+AGG | - | chr5_3:7041541-7041560 | None:intergenic | 40.0% | |
| ! | AGCATGATGTTGCCTCATTT+TGG | + | chr5_3:7041544-7041563 | Msa0795150:intron | 40.0% |
| ! | TAGTTTGTCATCACATGGGA+TGG | + | chr5_3:7041813-7041832 | Msa0795150:intron | 40.0% |
| GCAACCAGAAAATCAAACTG+AGG | - | chr5_3:7041859-7041878 | None:intergenic | 40.0% | |
| TAGACTTTGTCCTTGTGTTG+TGG | + | chr5_3:7041935-7041954 | Msa0795150:intron | 40.0% | |
| GTAACATCAACCACAACACA+AGG | - | chr5_3:7041948-7041967 | None:intergenic | 40.0% | |
| AAGGTAGCAGAATCAAGGAA+TGG | - | chr5_3:7042071-7042090 | None:intergenic | 40.0% | |
| AGCAAAAGGTAGCAGAATCA+AGG | - | chr5_3:7042076-7042095 | None:intergenic | 40.0% | |
| ! | TGATTCTGCTACCTTTTGCT+TGG | + | chr5_3:7042076-7042095 | Msa0795150:intron | 40.0% |
| ! | GATTCTGCTACCTTTTGCTT+GGG | + | chr5_3:7042077-7042096 | Msa0795150:intron | 40.0% |
| ! | ATTCTGCTACCTTTTGCTTG+GGG | + | chr5_3:7042078-7042097 | Msa0795150:intron | 40.0% |
| TTGATTTAGGGAGTGGTTCA+AGG | + | chr5_3:7042297-7042316 | Msa0795150:intron | 40.0% | |
| ! | GCCATCAATTTTTGCTTGAC+AGG | + | chr5_3:7042343-7042362 | Msa0795150:intron | 40.0% |
| TTGTGATCTCATCATGTTGC+TGG | + | chr5_3:7042406-7042425 | Msa0795150:intron | 40.0% | |
| CGACCTTTGAATCAAAAAGG+AGG | - | chr5_3:7042497-7042516 | None:intergenic | 40.0% | |
| !! | CCTTTTTGATTCAAAGGTCG+GGG | + | chr5_3:7042497-7042516 | Msa0795150:intron | 40.0% |
| ! | TTTTGTTGCCTACTGTCTGT+AGG | + | chr5_3:7042609-7042628 | Msa0795150:intron | 40.0% |
| TTTGTTGCCTACTGTCTGTA+GGG | + | chr5_3:7042610-7042629 | Msa0795150:intron | 40.0% | |
| TGTGAAGTGAAGGGACAAAT+TGG | + | chr5_3:7042647-7042666 | Msa0795150:intron | 40.0% | |
| ! | ATATGAAGGTGTAGAAGGAG+TGG | + | chr5_3:7043209-7043228 | Msa0795150:intron | 40.0% |
| !! | CTGTTATTTCCATCAGTGCA+TGG | + | chr5_3:7043292-7043311 | Msa0795150:CDS | 40.0% |
| ATATGGAAGGTGGAGAAGAA+TGG | + | chr5_3:7043322-7043341 | Msa0795150:CDS | 40.0% | |
| TATGGAAGGTGGAGAAGAAT+GGG | + | chr5_3:7043323-7043342 | Msa0795150:CDS | 40.0% | |
| AGAATGGGAAATATACCGTG+CGG | + | chr5_3:7043338-7043357 | Msa0795150:CDS | 40.0% | |
| TATAATCACTTAGCACCGCA+CGG | - | chr5_3:7043356-7043375 | None:intergenic | 40.0% | |
| TTATAACTCGACATGGAAGG+TGG | + | chr5_3:7043371-7043390 | Msa0795150:CDS | 40.0% | |
| ACATGGAAGGTGGAAAAGAA+TGG | + | chr5_3:7043381-7043400 | Msa0795150:CDS | 40.0% | |
| CATGGAAGGTGGAAAAGAAT+GGG | + | chr5_3:7043382-7043401 | Msa0795150:CDS | 40.0% | |
| AGAATGGGAACTATACTGTG+CGG | + | chr5_3:7043397-7043416 | Msa0795150:CDS | 40.0% | |
| ! | TTCAAGTTTGCCCTAGGTTT+GGG | + | chr5_3:7039316-7039335 | Msa0795150:intron | 40.0% |
| TCTTCTTCAACCCAAACCTA+GGG | - | chr5_3:7039329-7039348 | None:intergenic | 40.0% | |
| TTCTTCTTCAACCCAAACCT+AGG | - | chr5_3:7039330-7039349 | None:intergenic | 40.0% | |
| GGACTTTACTTCAAGTCGAA+AGG | + | chr5_3:7039424-7039443 | Msa0795150:intron | 40.0% | |
| TCGAAAGGGAGTAGCAAAAT+CGG | + | chr5_3:7039439-7039458 | Msa0795150:intron | 40.0% | |
| CGATATAGGATAGCAAAGTC+GGG | + | chr5_3:7039518-7039537 | Msa0795150:intron | 40.0% | |
| GGTATTTATAGAACGGGTCA+TGG | + | chr5_3:7039705-7039724 | Msa0795150:intron | 40.0% | |
| AACGGGTCATGGATTCAAAT+CGG | + | chr5_3:7039716-7039735 | Msa0795150:intron | 40.0% | |
| AATCGGGTCAATTTACGAAC+CGG | + | chr5_3:7039733-7039752 | Msa0795150:intron | 40.0% | |
| ! | CGATTTTGTGCGACTTTGAT+AGG | + | chr5_3:7039846-7039865 | Msa0795150:intron | 40.0% |
| CATAGCAAAGTCCCAAAAAC+AGG | - | chr5_3:7039878-7039897 | None:intergenic | 40.0% | |
| !!! | CTGTTTTTGGGACTTTGCTA+TGG | + | chr5_3:7039876-7039895 | Msa0795150:intron | 40.0% |
| ! | AGTCGCAAAAACCAGGATTT+TGG | + | chr5_3:7039923-7039942 | Msa0795150:intron | 40.0% |
| ! | GTCGCAAAAACCAGGATTTT+GGG | + | chr5_3:7039924-7039943 | Msa0795150:intron | 40.0% |
| GGAAAAAAAGTTGTGGGTAC+GGG | + | chr5_3:7040019-7040038 | Msa0795150:intron | 40.0% | |
| AAATAGAGCAGATACGGACT+CGG | - | chr5_3:7040062-7040081 | None:intergenic | 40.0% | |
| TGCAGAATTGCAACAAGTAG+AGG | - | chr5_3:7040151-7040170 | None:intergenic | 40.0% | |
| AAATTAAATCAGCTAGGGCG+AGG | + | chr5_3:7040294-7040313 | Msa0795150:CDS | 40.0% | |
| ATTCTATGTTGTTCCTCGAC+AGG | + | chr5_3:7040537-7040556 | Msa0795150:intron | 40.0% | |
| TTTGAGCTGAAGATCTGCTA+TGG | + | chr5_3:7040874-7040893 | Msa0795150:intron | 40.0% | |
| CTATGGCTGCTATACATACT+TGG | + | chr5_3:7040891-7040910 | Msa0795150:intron | 40.0% | |
| CCTATAAGCCTATAGAGCTT+AGG | - | chr5_3:7040924-7040943 | None:intergenic | 40.0% | |
| CCTAAGCTCTATAGGCTTAT+AGG | + | chr5_3:7040921-7040940 | Msa0795150:intron | 40.0% | |
| GAGGCAACATCATGCTTAAA+GGG | - | chr5_3:7041540-7041559 | None:intergenic | 40.0% | |
| TGAGGCAACATCATGCTTAA+AGG | - | chr5_3:7041541-7041560 | None:intergenic | 40.0% | |
| ! | AGCATGATGTTGCCTCATTT+TGG | + | chr5_3:7041544-7041563 | Msa0795150:intron | 40.0% |
| ! | TAGTTTGTCATCACATGGGA+TGG | + | chr5_3:7041813-7041832 | Msa0795150:intron | 40.0% |
| GCAACCAGAAAATCAAACTG+AGG | - | chr5_3:7041859-7041878 | None:intergenic | 40.0% | |
| TAGACTTTGTCCTTGTGTTG+TGG | + | chr5_3:7041935-7041954 | Msa0795150:intron | 40.0% | |
| GTAACATCAACCACAACACA+AGG | - | chr5_3:7041948-7041967 | None:intergenic | 40.0% | |
| AAGGTAGCAGAATCAAGGAA+TGG | - | chr5_3:7042071-7042090 | None:intergenic | 40.0% | |
| AGCAAAAGGTAGCAGAATCA+AGG | - | chr5_3:7042076-7042095 | None:intergenic | 40.0% | |
| ! | TGATTCTGCTACCTTTTGCT+TGG | + | chr5_3:7042076-7042095 | Msa0795150:intron | 40.0% |
| ! | GATTCTGCTACCTTTTGCTT+GGG | + | chr5_3:7042077-7042096 | Msa0795150:intron | 40.0% |
| ! | ATTCTGCTACCTTTTGCTTG+GGG | + | chr5_3:7042078-7042097 | Msa0795150:intron | 40.0% |
| TTGATTTAGGGAGTGGTTCA+AGG | + | chr5_3:7042297-7042316 | Msa0795150:intron | 40.0% | |
| ! | GCCATCAATTTTTGCTTGAC+AGG | + | chr5_3:7042343-7042362 | Msa0795150:intron | 40.0% |
| TTGTGATCTCATCATGTTGC+TGG | + | chr5_3:7042406-7042425 | Msa0795150:intron | 40.0% | |
| CGACCTTTGAATCAAAAAGG+AGG | - | chr5_3:7042497-7042516 | None:intergenic | 40.0% | |
| !! | CCTTTTTGATTCAAAGGTCG+GGG | + | chr5_3:7042497-7042516 | Msa0795150:intron | 40.0% |
| ! | TTTTGTTGCCTACTGTCTGT+AGG | + | chr5_3:7042609-7042628 | Msa0795150:intron | 40.0% |
| TTTGTTGCCTACTGTCTGTA+GGG | + | chr5_3:7042610-7042629 | Msa0795150:intron | 40.0% | |
| TGTGAAGTGAAGGGACAAAT+TGG | + | chr5_3:7042647-7042666 | Msa0795150:intron | 40.0% | |
| ! | ATATGAAGGTGTAGAAGGAG+TGG | + | chr5_3:7043209-7043228 | Msa0795150:intron | 40.0% |
| !! | CTGTTATTTCCATCAGTGCA+TGG | + | chr5_3:7043292-7043311 | Msa0795150:CDS | 40.0% |
| ATATGGAAGGTGGAGAAGAA+TGG | + | chr5_3:7043322-7043341 | Msa0795150:CDS | 40.0% | |
| TATGGAAGGTGGAGAAGAAT+GGG | + | chr5_3:7043323-7043342 | Msa0795150:CDS | 40.0% | |
| AGAATGGGAAATATACCGTG+CGG | + | chr5_3:7043338-7043357 | Msa0795150:CDS | 40.0% | |
| TATAATCACTTAGCACCGCA+CGG | - | chr5_3:7043356-7043375 | None:intergenic | 40.0% | |
| TTATAACTCGACATGGAAGG+TGG | + | chr5_3:7043371-7043390 | Msa0795150:CDS | 40.0% | |
| ACATGGAAGGTGGAAAAGAA+TGG | + | chr5_3:7043381-7043400 | Msa0795150:CDS | 40.0% | |
| CATGGAAGGTGGAAAAGAAT+GGG | + | chr5_3:7043382-7043401 | Msa0795150:CDS | 40.0% | |
| AGAATGGGAACTATACTGTG+CGG | + | chr5_3:7043397-7043416 | Msa0795150:CDS | 40.0% | |
| ! | ATGTGGTTCAAGTTTGCCCT+AGG | + | chr5_3:7039310-7039329 | Msa0795150:CDS | 45.0% |
| ! | GTTCAAGTTTGCCCTAGGTT+TGG | + | chr5_3:7039315-7039334 | Msa0795150:intron | 45.0% |
| ACAGAACACAGAAGCAGCAT+AGG | - | chr5_3:7039386-7039405 | None:intergenic | 45.0% | |
| CGAAAGGGAGTAGCAAAATC+GGG | + | chr5_3:7039440-7039459 | Msa0795150:intron | 45.0% | |
| ACGGGTCATGGATTCAAATC+GGG | + | chr5_3:7039717-7039736 | Msa0795150:intron | 45.0% | |
| ATCGGGTCAATTTACGAACC+GGG | + | chr5_3:7039734-7039753 | Msa0795150:intron | 45.0% | |
| TACGCAAAGTCGCAAAAACC+AGG | + | chr5_3:7039916-7039935 | Msa0795150:intron | 45.0% | |
| CGACTTAAGTCCCAAAATCC+TGG | - | chr5_3:7039937-7039956 | None:intergenic | 45.0% | |
| AATAGAGCAGATACGGACTC+GGG | - | chr5_3:7040061-7040080 | None:intergenic | 45.0% | |
| !! | ACGAGAGTGATTCGGTTTGA+AGG | + | chr5_3:7040419-7040438 | Msa0795150:CDS | 45.0% |
| CTTCTGATATAGTCCTGTCG+AGG | - | chr5_3:7040553-7040572 | None:intergenic | 45.0% | |
| CTTCAACAGAGAAGAGGACA+AGG | + | chr5_3:7040584-7040603 | Msa0795150:CDS | 45.0% | |
| ! | AGAGAAGCGTGTTCACTTTG+TGG | + | chr5_3:7040630-7040649 | Msa0795150:intron | 45.0% |
| TCCTCAACAGGCACGAAATT+CGG | - | chr5_3:7040685-7040704 | None:intergenic | 45.0% | |
| ! | CTTTTCCCACTCAGTTGGAT+CGG | - | chr5_3:7040762-7040781 | None:intergenic | 45.0% |
| ! | TCAGTTGTGTTGCCCTGTTT+TGG | + | chr5_3:7040812-7040831 | Msa0795150:intron | 45.0% |
| !!! | TTGTGTTGCCCTGTTTTGGT+TGG | + | chr5_3:7040816-7040835 | Msa0795150:intron | 45.0% |
| !! | AGTGTTTGGCACTGACTTTG+TGG | - | chr5_3:7042189-7042208 | None:intergenic | 45.0% |
| TCTCATCATGTTGCTGGACA+TGG | + | chr5_3:7042412-7042431 | Msa0795150:intron | 45.0% | |
| CCCCGACCTTTGAATCAAAA+AGG | - | chr5_3:7042500-7042519 | None:intergenic | 45.0% | |
| !! | TGGGTTTGCTATTGCTTTGC+AGG | + | chr5_3:7042543-7042562 | Msa0795150:intron | 45.0% |
| GACAGTAGGCAACAAAACAC+AGG | - | chr5_3:7042606-7042625 | None:intergenic | 45.0% | |
| ! | TAGTGGATCTTAGCGAAGTC+CGG | + | chr5_3:7042702-7042721 | Msa0795150:intron | 45.0% |
| TATTTCCATCAGTGCATGGC+AGG | + | chr5_3:7043296-7043315 | Msa0795150:CDS | 45.0% | |
| ! | ATGTGGTTCAAGTTTGCCCT+AGG | + | chr5_3:7039310-7039329 | Msa0795150:CDS | 45.0% |
| ! | GTTCAAGTTTGCCCTAGGTT+TGG | + | chr5_3:7039315-7039334 | Msa0795150:intron | 45.0% |
| ACAGAACACAGAAGCAGCAT+AGG | - | chr5_3:7039386-7039405 | None:intergenic | 45.0% | |
| CGAAAGGGAGTAGCAAAATC+GGG | + | chr5_3:7039440-7039459 | Msa0795150:intron | 45.0% | |
| ACGGGTCATGGATTCAAATC+GGG | + | chr5_3:7039717-7039736 | Msa0795150:intron | 45.0% | |
| ATCGGGTCAATTTACGAACC+GGG | + | chr5_3:7039734-7039753 | Msa0795150:intron | 45.0% | |
| TACGCAAAGTCGCAAAAACC+AGG | + | chr5_3:7039916-7039935 | Msa0795150:intron | 45.0% | |
| CGACTTAAGTCCCAAAATCC+TGG | - | chr5_3:7039937-7039956 | None:intergenic | 45.0% | |
| AATAGAGCAGATACGGACTC+GGG | - | chr5_3:7040061-7040080 | None:intergenic | 45.0% | |
| !! | ACGAGAGTGATTCGGTTTGA+AGG | + | chr5_3:7040419-7040438 | Msa0795150:CDS | 45.0% |
| CTTCTGATATAGTCCTGTCG+AGG | - | chr5_3:7040553-7040572 | None:intergenic | 45.0% | |
| CTTCAACAGAGAAGAGGACA+AGG | + | chr5_3:7040584-7040603 | Msa0795150:CDS | 45.0% | |
| ! | AGAGAAGCGTGTTCACTTTG+TGG | + | chr5_3:7040630-7040649 | Msa0795150:intron | 45.0% |
| TCCTCAACAGGCACGAAATT+CGG | - | chr5_3:7040685-7040704 | None:intergenic | 45.0% | |
| ! | CTTTTCCCACTCAGTTGGAT+CGG | - | chr5_3:7040762-7040781 | None:intergenic | 45.0% |
| ! | TCAGTTGTGTTGCCCTGTTT+TGG | + | chr5_3:7040812-7040831 | Msa0795150:intron | 45.0% |
| !!! | TTGTGTTGCCCTGTTTTGGT+TGG | + | chr5_3:7040816-7040835 | Msa0795150:intron | 45.0% |
| !! | AGTGTTTGGCACTGACTTTG+TGG | - | chr5_3:7042189-7042208 | None:intergenic | 45.0% |
| TCTCATCATGTTGCTGGACA+TGG | + | chr5_3:7042412-7042431 | Msa0795150:intron | 45.0% | |
| CCCCGACCTTTGAATCAAAA+AGG | - | chr5_3:7042500-7042519 | None:intergenic | 45.0% | |
| !! | TGGGTTTGCTATTGCTTTGC+AGG | + | chr5_3:7042543-7042562 | Msa0795150:intron | 45.0% |
| GACAGTAGGCAACAAAACAC+AGG | - | chr5_3:7042606-7042625 | None:intergenic | 45.0% | |
| ! | TAGTGGATCTTAGCGAAGTC+CGG | + | chr5_3:7042702-7042721 | Msa0795150:intron | 45.0% |
| TATTTCCATCAGTGCATGGC+AGG | + | chr5_3:7043296-7043315 | Msa0795150:CDS | 45.0% | |
| !!! | ATTTAAAATTATTTTTGTTT+TGG | - | chr5_3:7039578-7039597 | None:intergenic | 5.0% |
| !!! | TATTTAATTTAATGTTTTAT+TGG | + | chr5_3:7040468-7040487 | Msa0795150:intron | 5.0% |
| !!! | TAATTATAATTTTATAATCA+AGG | - | chr5_3:7041972-7041991 | None:intergenic | 5.0% |
| !!! | ATTTAAAATTATTTTTGTTT+TGG | - | chr5_3:7039578-7039597 | None:intergenic | 5.0% |
| !!! | TATTTAATTTAATGTTTTAT+TGG | + | chr5_3:7040468-7040487 | Msa0795150:intron | 5.0% |
| !!! | TAATTATAATTTTATAATCA+AGG | - | chr5_3:7041972-7041991 | None:intergenic | 5.0% |
| CTGCTTCTGTGTTCTGTGCA+AGG | + | chr5_3:7039389-7039408 | Msa0795150:intron | 50.0% | |
| TGTAACCGATGTCTGACACG+TGG | + | chr5_3:7040092-7040111 | Msa0795150:intron | 50.0% | |
| TGTAGCCACGTGTCAGACAT+CGG | - | chr5_3:7040100-7040119 | None:intergenic | 50.0% | |
| AGAGGAGGACGAGAGTGATT+CGG | + | chr5_3:7040411-7040430 | Msa0795150:CDS | 50.0% | |
| GGGCAACTTCAACAGAGAAG+AGG | + | chr5_3:7040578-7040597 | Msa0795150:CDS | 50.0% | |
| ACCGAATTTCGTGCCTGTTG+AGG | + | chr5_3:7040681-7040700 | Msa0795150:intron | 50.0% | |
| ACTCAGTTGGATCGGCTACA+TGG | - | chr5_3:7040754-7040773 | None:intergenic | 50.0% | |
| ATGTAGCCGATCCAACTGAG+TGG | + | chr5_3:7040753-7040772 | Msa0795150:intron | 50.0% | |
| TGTAGCCGATCCAACTGAGT+GGG | + | chr5_3:7040754-7040773 | Msa0795150:intron | 50.0% | |
| CGATCCAACTGAGTGGGAAA+AGG | + | chr5_3:7040760-7040779 | Msa0795150:intron | 50.0% | |
| ! | CAAGCCTTTTCCCACTCAGT+TGG | - | chr5_3:7040767-7040786 | None:intergenic | 50.0% |
| ACTCTCCCAGACACAAGCAT+AGG | + | chr5_3:7041476-7041495 | Msa0795150:intron | 50.0% | |
| CCACACCTATGCTTGTGTCT+GGG | - | chr5_3:7041484-7041503 | None:intergenic | 50.0% | |
| ACCACACCTATGCTTGTGTC+TGG | - | chr5_3:7041485-7041504 | None:intergenic | 50.0% | |
| ! | TGCTACCTTTTGCTTGGGGT+GGG | + | chr5_3:7042082-7042101 | Msa0795150:intron | 50.0% |
| ! | TTTTGCTTGGGGTGGGTCTT+GGG | + | chr5_3:7042089-7042108 | Msa0795150:intron | 50.0% |
| !! | TTGGCACTGACTTTGTGGCT+GGG | - | chr5_3:7042184-7042203 | None:intergenic | 50.0% |
| !! | TTTGGCACTGACTTTGTGGC+TGG | - | chr5_3:7042185-7042204 | None:intergenic | 50.0% |
| GGGAGTGGTTCAAGGTTGTT+TGG | + | chr5_3:7042305-7042324 | Msa0795150:intron | 50.0% | |
| TTTGTGCCTAGAGAGCCTTG+CGG | + | chr5_3:7042373-7042392 | Msa0795150:intron | 50.0% | |
| CACAACATACACAGTCCGCA+AGG | - | chr5_3:7042391-7042410 | None:intergenic | 50.0% | |
| GTTGAGACCCTACAGACAGT+AGG | - | chr5_3:7042620-7042639 | None:intergenic | 50.0% | |
| CTGCTTCTGTGTTCTGTGCA+AGG | + | chr5_3:7039389-7039408 | Msa0795150:intron | 50.0% | |
| TGTAACCGATGTCTGACACG+TGG | + | chr5_3:7040092-7040111 | Msa0795150:intron | 50.0% | |
| TGTAGCCACGTGTCAGACAT+CGG | - | chr5_3:7040100-7040119 | None:intergenic | 50.0% | |
| AGAGGAGGACGAGAGTGATT+CGG | + | chr5_3:7040411-7040430 | Msa0795150:CDS | 50.0% | |
| GGGCAACTTCAACAGAGAAG+AGG | + | chr5_3:7040578-7040597 | Msa0795150:CDS | 50.0% | |
| ACCGAATTTCGTGCCTGTTG+AGG | + | chr5_3:7040681-7040700 | Msa0795150:intron | 50.0% | |
| ACTCAGTTGGATCGGCTACA+TGG | - | chr5_3:7040754-7040773 | None:intergenic | 50.0% | |
| ATGTAGCCGATCCAACTGAG+TGG | + | chr5_3:7040753-7040772 | Msa0795150:intron | 50.0% | |
| TGTAGCCGATCCAACTGAGT+GGG | + | chr5_3:7040754-7040773 | Msa0795150:intron | 50.0% | |
| CGATCCAACTGAGTGGGAAA+AGG | + | chr5_3:7040760-7040779 | Msa0795150:intron | 50.0% | |
| ! | CAAGCCTTTTCCCACTCAGT+TGG | - | chr5_3:7040767-7040786 | None:intergenic | 50.0% |
| ACTCTCCCAGACACAAGCAT+AGG | + | chr5_3:7041476-7041495 | Msa0795150:intron | 50.0% | |
| CCACACCTATGCTTGTGTCT+GGG | - | chr5_3:7041484-7041503 | None:intergenic | 50.0% | |
| ACCACACCTATGCTTGTGTC+TGG | - | chr5_3:7041485-7041504 | None:intergenic | 50.0% | |
| ! | TGCTACCTTTTGCTTGGGGT+GGG | + | chr5_3:7042082-7042101 | Msa0795150:intron | 50.0% |
| ! | TTTTGCTTGGGGTGGGTCTT+GGG | + | chr5_3:7042089-7042108 | Msa0795150:intron | 50.0% |
| !! | TTGGCACTGACTTTGTGGCT+GGG | - | chr5_3:7042184-7042203 | None:intergenic | 50.0% |
| !! | TTTGGCACTGACTTTGTGGC+TGG | - | chr5_3:7042185-7042204 | None:intergenic | 50.0% |
| GGGAGTGGTTCAAGGTTGTT+TGG | + | chr5_3:7042305-7042324 | Msa0795150:intron | 50.0% | |
| TTTGTGCCTAGAGAGCCTTG+CGG | + | chr5_3:7042373-7042392 | Msa0795150:intron | 50.0% | |
| CACAACATACACAGTCCGCA+AGG | - | chr5_3:7042391-7042410 | None:intergenic | 50.0% | |
| GTTGAGACCCTACAGACAGT+AGG | - | chr5_3:7042620-7042639 | None:intergenic | 50.0% | |
| CCCAGACACAAGCATAGGTG+TGG | + | chr5_3:7041481-7041500 | Msa0795150:intron | 55.0% | |
| ! | CTGCTACCTTTTGCTTGGGG+TGG | + | chr5_3:7042081-7042100 | Msa0795150:intron | 55.0% |
| CAAGACCCACCCCAAGCAAA+AGG | - | chr5_3:7042090-7042109 | None:intergenic | 55.0% | |
| ! | CTTTTGCTTGGGGTGGGTCT+TGG | + | chr5_3:7042088-7042107 | Msa0795150:intron | 55.0% |
| CATGGACAGTCGGTACCTTG+CGG | + | chr5_3:7042453-7042472 | Msa0795150:intron | 55.0% | |
| ! | ACCTTGCGGACTGCTATGTG+CGG | + | chr5_3:7042467-7042486 | Msa0795150:intron | 55.0% |
| TTAGCGAAGTCCGGTAGTGC+AGG | + | chr5_3:7042711-7042730 | Msa0795150:intron | 55.0% | |
| ATCTGCCTGCCATGCACTGA+TGG | - | chr5_3:7043304-7043323 | None:intergenic | 55.0% | |
| CAGTGCATGGCAGGCAGATA+TGG | + | chr5_3:7043305-7043324 | Msa0795150:CDS | 55.0% | |
| GCATGGCAGGCAGATATGGA+AGG | + | chr5_3:7043309-7043328 | Msa0795150:CDS | 55.0% | |
| TGGCAGGCAGATATGGAAGG+TGG | + | chr5_3:7043312-7043331 | Msa0795150:CDS | 55.0% | |
| CCCAGACACAAGCATAGGTG+TGG | + | chr5_3:7041481-7041500 | Msa0795150:intron | 55.0% | |
| ! | CTGCTACCTTTTGCTTGGGG+TGG | + | chr5_3:7042081-7042100 | Msa0795150:intron | 55.0% |
| CAAGACCCACCCCAAGCAAA+AGG | - | chr5_3:7042090-7042109 | None:intergenic | 55.0% | |
| ! | CTTTTGCTTGGGGTGGGTCT+TGG | + | chr5_3:7042088-7042107 | Msa0795150:intron | 55.0% |
| CATGGACAGTCGGTACCTTG+CGG | + | chr5_3:7042453-7042472 | Msa0795150:intron | 55.0% | |
| ! | ACCTTGCGGACTGCTATGTG+CGG | + | chr5_3:7042467-7042486 | Msa0795150:intron | 55.0% |
| TTAGCGAAGTCCGGTAGTGC+AGG | + | chr5_3:7042711-7042730 | Msa0795150:intron | 55.0% | |
| ATCTGCCTGCCATGCACTGA+TGG | - | chr5_3:7043304-7043323 | None:intergenic | 55.0% | |
| CAGTGCATGGCAGGCAGATA+TGG | + | chr5_3:7043305-7043324 | Msa0795150:CDS | 55.0% | |
| GCATGGCAGGCAGATATGGA+AGG | + | chr5_3:7043309-7043328 | Msa0795150:CDS | 55.0% | |
| TGGCAGGCAGATATGGAAGG+TGG | + | chr5_3:7043312-7043331 | Msa0795150:CDS | 55.0% | |
| AGCAGATACGGACTCGGGTC+GGG | - | chr5_3:7040056-7040075 | None:intergenic | 60.0% | |
| GAGCAGATACGGACTCGGGT+CGG | - | chr5_3:7040057-7040076 | None:intergenic | 60.0% | |
| TGCCTGTTGAGGACGCTGAG+TGG | + | chr5_3:7040692-7040711 | Msa0795150:intron | 60.0% | |
| CACCACTCAGCGTCCTCAAC+AGG | - | chr5_3:7040697-7040716 | None:intergenic | 60.0% | |
| CACAGTCCGCAAGGCTCTCT+AGG | - | chr5_3:7042382-7042401 | None:intergenic | 60.0% | |
| ACCGCACATAGCAGTCCGCA+AGG | - | chr5_3:7042471-7042490 | None:intergenic | 60.0% | |
| AGGCATGCCACCTGCACTAC+CGG | - | chr5_3:7042724-7042743 | None:intergenic | 60.0% | |
| AGCAGATACGGACTCGGGTC+GGG | - | chr5_3:7040056-7040075 | None:intergenic | 60.0% | |
| GAGCAGATACGGACTCGGGT+CGG | - | chr5_3:7040057-7040076 | None:intergenic | 60.0% | |
| TGCCTGTTGAGGACGCTGAG+TGG | + | chr5_3:7040692-7040711 | Msa0795150:intron | 60.0% | |
| CACCACTCAGCGTCCTCAAC+AGG | - | chr5_3:7040697-7040716 | None:intergenic | 60.0% | |
| CACAGTCCGCAAGGCTCTCT+AGG | - | chr5_3:7042382-7042401 | None:intergenic | 60.0% | |
| ACCGCACATAGCAGTCCGCA+AGG | - | chr5_3:7042471-7042490 | None:intergenic | 60.0% | |
| AGGCATGCCACCTGCACTAC+CGG | - | chr5_3:7042724-7042743 | None:intergenic | 60.0% | |
| GGACGCTGAGTGGTGAGCTG+CGG | + | chr5_3:7040702-7040721 | Msa0795150:intron | 65.0% | |
| GACGCTGAGTGGTGAGCTGC+GGG | + | chr5_3:7040703-7040722 | Msa0795150:intron | 65.0% | |
| GCGAAGTCCGGTAGTGCAGG+TGG | + | chr5_3:7042714-7042733 | Msa0795150:intron | 65.0% | |
| GGACGCTGAGTGGTGAGCTG+CGG | + | chr5_3:7040702-7040721 | Msa0795150:intron | 65.0% | |
| GACGCTGAGTGGTGAGCTGC+GGG | + | chr5_3:7040703-7040722 | Msa0795150:intron | 65.0% | |
| GCGAAGTCCGGTAGTGCAGG+TGG | + | chr5_3:7042714-7042733 | Msa0795150:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 7039310 | 7043425 | 7039310 | ID=Msa0795150;Name=Msa0795150 |
| chr5_3 | mRNA | 7039310 | 7043425 | 7039310 | ID=Msa0795150-mRNA-1;Parent=Msa0795150;Name=Msa0795150-mRNA-1;_AED=0.69;_eAED=0.69;_QI=0|0.33|0|0.5|0.66|0.75|4|0|127 |
| chr5_3 | exon | 7039310 | 7039331 | 7039310 | ID=Msa0795150-mRNA-1:exon:2874;Parent=Msa0795150-mRNA-1 |
| chr5_3 | exon | 7040282 | 7040459 | 7040282 | ID=Msa0795150-mRNA-1:exon:2875;Parent=Msa0795150-mRNA-1 |
| chr5_3 | exon | 7040559 | 7040605 | 7040559 | ID=Msa0795150-mRNA-1:exon:2876;Parent=Msa0795150-mRNA-1 |
| chr5_3 | exon | 7043289 | 7043425 | 7043289 | ID=Msa0795150-mRNA-1:exon:2877;Parent=Msa0795150-mRNA-1 |
| chr5_3 | CDS | 7039310 | 7039331 | 7039310 | ID=Msa0795150-mRNA-1:cds;Parent=Msa0795150-mRNA-1 |
| chr5_3 | CDS | 7040282 | 7040459 | 7040282 | ID=Msa0795150-mRNA-1:cds;Parent=Msa0795150-mRNA-1 |
| chr5_3 | CDS | 7040559 | 7040605 | 7040559 | ID=Msa0795150-mRNA-1:cds;Parent=Msa0795150-mRNA-1 |
| chr5_3 | CDS | 7043289 | 7043425 | 7043289 | ID=Msa0795150-mRNA-1:cds;Parent=Msa0795150-mRNA-1 |
| Gene Sequence |
| Protein sequence |
