Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0801690 | sp|O64967|HMDH2_GOSHI | 66.919 | 396 | 53 | 5 | 4 | 321 | 193 | 588 | 4.56e-178 | 509 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0801690 | G7K5H6 | 80.818 | 391 | 5 | 4 | 1 | 321 | 120 | 510 | 0.0 | 604 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0801680 | Msa0801690 | 0.896599 | 3.161674e-76 | -8.615850e-47 |
| Msa0801690 | Msa0840040 | 0.882796 | 7.711454e-71 | -8.615850e-47 |
| Msa0801690 | Msa0840050 | 0.847236 | 1.313775e-59 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0801690 | MtrunA17_Chr5g0409031 | 80.779 | 385 | 4 | 4 | 7 | 321 | 126 | 510 | 0.0 | 593 |
| Msa0801690 | MtrunA17_Chr5g0408981 | 80.779 | 385 | 4 | 4 | 7 | 321 | 118 | 502 | 0.0 | 592 |
| Msa0801690 | MtrunA17_Chr5g0442831 | 79.434 | 389 | 10 | 4 | 3 | 321 | 117 | 505 | 0.0 | 590 |
| Msa0801690 | MtrunA17_Chr5g0409021 | 80.519 | 385 | 5 | 4 | 7 | 321 | 118 | 502 | 0.0 | 590 |
| Msa0801690 | MtrunA17_Chr5g0408991 | 80.519 | 385 | 5 | 4 | 7 | 321 | 118 | 502 | 0.0 | 590 |
| Msa0801690 | MtrunA17_Chr5g0409001 | 80.519 | 385 | 5 | 4 | 7 | 321 | 118 | 502 | 0.0 | 590 |
| Msa0801690 | MtrunA17_Chr5g0409011 | 80.519 | 385 | 5 | 4 | 7 | 321 | 118 | 502 | 0.0 | 590 |
| Msa0801690 | MtrunA17_Chr5g0407521 | 75.188 | 399 | 19 | 5 | 3 | 321 | 129 | 527 | 0.0 | 565 |
| Msa0801690 | MtrunA17_Chr8g0370001 | 70.712 | 379 | 41 | 4 | 13 | 321 | 165 | 543 | 0.0 | 517 |
| Msa0801690 | MtrunA17_Chr5g0440371 | 66.925 | 387 | 53 | 6 | 5 | 321 | 144 | 525 | 1.41e-169 | 483 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0801690 | AT1G76490.1 | 65.957 | 376 | 58 | 4 | 16 | 321 | 221 | 596 | 3.77e-169 | 484 |
| Msa0801690 | AT2G17370.1 | 61.340 | 388 | 76 | 6 | 4 | 321 | 136 | 519 | 3.39e-159 | 456 |
Find 102 sgRNAs with CRISPR-Local
Find 482 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTAAATTTACTTGGTGTTAA+AGG | 0.164546 | 5_3:+15811385 | Msa0801690:CDS |
| TGTAAAGCTATTTATGTTTC+CGG | 0.222759 | 5_3:+15806727 | Msa0801690:CDS |
| TTTCCCGATATGGATGTTAT+TGG | 0.272380 | 5_3:+15810959 | Msa0801690:CDS |
| TTTCAACTGAGAAGCTCTTT+TGG | 0.287869 | 5_3:-15806815 | None:intergenic |
| ATGGATGTTATTGGTATATC+TGG | 0.294760 | 5_3:+15810968 | Msa0801690:CDS |
| CCGGTCCTTTGTTGCTCGAC+GGG | 0.332695 | 5_3:+15806641 | Msa0801690:CDS |
| GAAGACTAGTGTGGAGTCTT+TGG | 0.337986 | 5_3:+15811099 | Msa0801690:CDS |
| AATAGCTTTACAGCCTCTAT+TGG | 0.352070 | 5_3:-15806716 | None:intergenic |
| CAGATTCCGGTAGGTGTTGC+CGG | 0.353294 | 5_3:+15806622 | Msa0801690:intron |
| AGACTCCAGGAGCAAATTCC+AGG | 0.354489 | 5_3:+15811419 | Msa0801690:CDS |
| AGAAAGCTGCGGCAGTGAAT+TGG | 0.369757 | 5_3:+15811008 | Msa0801690:CDS |
| CAAGCAGTTGAGAGAGTTAC+CGG | 0.376087 | 5_3:+15806514 | Msa0801690:CDS |
| GGTTGTCGGTGCGGTGGTAT+CGG | 0.377254 | 5_3:+15806423 | Msa0801690:CDS |
| TCAGCCATGGCTGGTGCTCT+TGG | 0.377924 | 5_3:+15811154 | Msa0801690:CDS |
| GGCAACCACCGAAGGTTGTT+TGG | 0.379682 | 5_3:+15806684 | Msa0801690:CDS |
| AGTTGCCTGGAATTTGCTCC+TGG | 0.383258 | 5_3:-15811424 | None:intergenic |
| AACATCCATATCGGGAAAAT+CGG | 0.385940 | 5_3:-15810954 | None:intergenic |
| TATACCAATAACATCCATAT+CGG | 0.391041 | 5_3:-15810963 | None:intergenic |
| ATAAAGGATTAAAGCGACTA+TGG | 0.399584 | 5_3:+15810829 | Msa0801690:intron |
| TAAACCTTCAAGTGACCTTC+CGG | 0.419965 | 5_3:-15806533 | None:intergenic |
| GTTGTCGGTGCGGTGGTATC+GGG | 0.422716 | 5_3:+15806424 | Msa0801690:CDS |
| CACAACGGCGGAAGCACCAC+CGG | 0.431698 | 5_3:-15806746 | None:intergenic |
| ACTAGATTCACTTGTTCAAC+GGG | 0.437170 | 5_3:+15810869 | Msa0801690:CDS |
| AGGAGCAAATTCCAGGCAAC+TGG | 0.448129 | 5_3:+15811426 | Msa0801690:CDS |
| TGTTCAACGGGTGATGCAAT+GGG | 0.450595 | 5_3:+15810881 | Msa0801690:CDS |
| TACTATAGTTGCCAGTTGCC+TGG | 0.450825 | 5_3:-15811437 | None:intergenic |
| GCCGGTCCTTTGTTGCTCGA+CGG | 0.452645 | 5_3:+15806640 | Msa0801690:CDS |
| AACTGCTTGGTTCCTAATCA+TGG | 0.452670 | 5_3:-15806500 | None:intergenic |
| GCCGACGTGCAGCCATGATT+AGG | 0.455535 | 5_3:+15806488 | Msa0801690:CDS |
| AAGGTCCTTTCCGTCATTCA+CGG | 0.465602 | 5_3:-15811284 | None:intergenic |
| TCAGCTTGTCTAAATTTACT+TGG | 0.470739 | 5_3:+15811376 | Msa0801690:CDS |
| TCCTACTGTGCCCACCTCAA+TGG | 0.473062 | 5_3:-15811329 | None:intergenic |
| ATTGAGGTGGGCACAGTAGG+AGG | 0.475464 | 5_3:+15811331 | Msa0801690:CDS |
| GCCATGGCTGGTGCTCTTGG+CGG | 0.483639 | 5_3:+15811157 | Msa0801690:CDS |
| GCGGAGTTGAATCTTACAAC+GGG | 0.487921 | 5_3:-15806793 | None:intergenic |
| CACTAGATTCACTTGTTCAA+CGG | 0.489118 | 5_3:+15810868 | Msa0801690:CDS |
| GTGAATTGGATTGAAGGGAG+AGG | 0.493977 | 5_3:+15811022 | Msa0801690:CDS |
| AGGATTAAAGCGACTATGGC+AGG | 0.495458 | 5_3:+15810833 | Msa0801690:intron |
| TTGTTCAACGGGTGATGCAA+TGG | 0.497983 | 5_3:+15810880 | Msa0801690:CDS |
| GCTTGCAACCAAACAACCTT+CGG | 0.498750 | 5_3:-15806692 | None:intergenic |
| GACAACCTCCTCGTCTTCCA+TGG | 0.499603 | 5_3:-15806407 | None:intergenic |
| TGAGGTGGGCACAGTAGGAG+GGG | 0.507780 | 5_3:+15811333 | Msa0801690:CDS |
| GTCATTCACGGCTTCCATCA+TGG | 0.509060 | 5_3:-15811272 | None:intergenic |
| ATGGAAGACGAGGAGGTTGT+CGG | 0.511840 | 5_3:+15806409 | Msa0801690:CDS |
| TTGAGGTGGGCACAGTAGGA+GGG | 0.514782 | 5_3:+15811332 | Msa0801690:CDS |
| CACTATGCCTTCCATTGAGG+TGG | 0.515478 | 5_3:+15811318 | Msa0801690:CDS |
| GAACTTTCAACATTCTGAGC+AGG | 0.515798 | 5_3:-15811238 | None:intergenic |
| GTTACCGGAAGGTCACTTGA+AGG | 0.524733 | 5_3:+15806529 | Msa0801690:CDS |
| GCGGCAGTGAATTGGATTGA+AGG | 0.530179 | 5_3:+15811016 | Msa0801690:CDS |
| TCCGCCGTTGTGCTCCGCGA+CGG | 0.530752 | 5_3:+15806757 | Msa0801690:CDS |
| GCCGCCAAGAGCACCAGCCA+TGG | 0.530980 | 5_3:-15811158 | None:intergenic |
| CTTACTGGTTCAGCCATGGC+TGG | 0.534747 | 5_3:+15811145 | Msa0801690:CDS |
| GCATAGTGACTGAGATATGA+AGG | 0.538116 | 5_3:-15811303 | None:intergenic |
| CGGTAACTCTCTCAACTGCT+TGG | 0.539523 | 5_3:-15806513 | None:intergenic |
| CAGCCATGGCTGAACCAGTA+AGG | 0.543116 | 5_3:-15811144 | None:intergenic |
| ATACCAATAACATCCATATC+GGG | 0.544400 | 5_3:-15810962 | None:intergenic |
| TGAATTGGATTGAAGGGAGA+GGG | 0.544400 | 5_3:+15811023 | Msa0801690:CDS |
| TTGGTTGCAAGCACCAATAG+AGG | 0.544821 | 5_3:+15806703 | Msa0801690:CDS |
| TCCATTGAGGTGGGCACAGT+AGG | 0.547051 | 5_3:+15811328 | Msa0801690:CDS |
| CCCGTCGAGCAACAAAGGAC+CGG | 0.551690 | 5_3:-15806641 | None:intergenic |
| TACTCGCTTGAATCCAAGCT+CGG | 0.557539 | 5_3:+15806460 | Msa0801690:CDS |
| ACGTCGGCAATCTCCGAGCT+TGG | 0.557698 | 5_3:-15806473 | None:intergenic |
| CTTGAAGGTTTACCGATGGA+AGG | 0.561666 | 5_3:+15806544 | Msa0801690:CDS |
| ATGATGGAAGCCGTGAATGA+CGG | 0.562542 | 5_3:+15811274 | Msa0801690:CDS |
| CAACCTTCGGTGGTTGCCAT+CGG | 0.562844 | 5_3:-15806679 | None:intergenic |
| GTCACTTGAAGGTTTACCGA+TGG | 0.569033 | 5_3:+15806540 | Msa0801690:CDS |
| TTCTCACTGTATGACCATGA+TGG | 0.576680 | 5_3:+15811258 | Msa0801690:CDS |
| GTGCCGATGGCAACCACCGA+AGG | 0.578946 | 5_3:+15806676 | Msa0801690:CDS |
| AGTCACTATGCCTTCCATTG+AGG | 0.579598 | 5_3:+15811315 | Msa0801690:CDS |
| CGGCAGTGAATTGGATTGAA+GGG | 0.579892 | 5_3:+15811017 | Msa0801690:CDS |
| CGAGGAGGTTGTCGGTGCGG+TGG | 0.586335 | 5_3:+15806417 | Msa0801690:CDS |
| GGCTGTAATAAAGGAAGAGG+TGG | 0.590912 | 5_3:+15811063 | Msa0801690:intron |
| GGAGCTAGTAAAGAGACTCC+AGG | 0.592509 | 5_3:+15811406 | Msa0801690:CDS |
| TCATTCCCGTCGAGCAACAA+AGG | 0.592806 | 5_3:-15806646 | None:intergenic |
| AAACCTTACTGGTTCAGCCA+TGG | 0.593436 | 5_3:+15811141 | Msa0801690:CDS |
| GAGGTGGGCACAGTAGGAGG+GGG | 0.595689 | 5_3:+15811334 | Msa0801690:CDS |
| TGCAACCAAACAACCTTCGG+TGG | 0.597240 | 5_3:-15806689 | None:intergenic |
| CATTCCGTCGCGGAGCACAA+CGG | 0.610168 | 5_3:-15806761 | None:intergenic |
| GAATGAGTACACGGTGCCGA+TGG | 0.611062 | 5_3:+15806663 | Msa0801690:CDS |
| ACTGTGCCCACCTCAATGGA+AGG | 0.611639 | 5_3:-15811325 | None:intergenic |
| GGAAGCCGTGAATGACGGAA+AGG | 0.619681 | 5_3:+15811279 | Msa0801690:CDS |
| TGATGCAATGGGGATGAACA+TGG | 0.620753 | 5_3:+15810892 | Msa0801690:CDS |
| GGCGGAGTTGAATCTTACAA+CGG | 0.622253 | 5_3:-15806794 | None:intergenic |
| TCGTAGTCAAAACCTTCCAT+CGG | 0.628308 | 5_3:-15806556 | None:intergenic |
| ACTATGCCTTCCATTGAGGT+GGG | 0.631117 | 5_3:+15811319 | Msa0801690:CDS |
| AGACGAGGAGGTTGTCGGTG+CGG | 0.634747 | 5_3:+15806414 | Msa0801690:CDS |
| GGGATGAACATGGTATCGAA+AGG | 0.641709 | 5_3:+15810902 | Msa0801690:CDS |
| AAAGCTATTTATGTTTCCGG+TGG | 0.645691 | 5_3:+15806730 | Msa0801690:CDS |
| AGTTATGTCCATGGAAGACG+AGG | 0.649583 | 5_3:+15806399 | Msa0801690:CDS |
| TTGGATTCAAGCGAGTAAGA+CGG | 0.650574 | 5_3:-15806454 | None:intergenic |
| CAGTTGAGAGAGTTACCGGA+AGG | 0.670466 | 5_3:+15806518 | Msa0801690:CDS |
| CGGAGTTGAATCTTACAACG+GGG | 0.676491 | 5_3:-15806792 | None:intergenic |
| GAAAGTGCTGAAGACTAGTG+TGG | 0.677484 | 5_3:+15811090 | Msa0801690:CDS |
| TGAAGGGAGAGGGAAATCAG+TGG | 0.677523 | 5_3:+15811033 | Msa0801690:CDS |
| TTGTTCGGACAAGAAAGCTG+CGG | 0.678327 | 5_3:+15810997 | Msa0801690:CDS |
| TCCGTCGCGGAGCACAACGG+CGG | 0.678366 | 5_3:-15806758 | None:intergenic |
| TCCTAATCATGGCTGCACGT+CGG | 0.685111 | 5_3:-15806489 | None:intergenic |
| TATGTCCATGGAAGACGAGG+AGG | 0.690419 | 5_3:+15806402 | Msa0801690:CDS |
| GCTCGACGGGAATGAGTACA+CGG | 0.696837 | 5_3:+15806654 | Msa0801690:CDS |
| GGGCTCTGGTCATTCCGTCG+CGG | 0.721794 | 5_3:-15806771 | None:intergenic |
| GGAGTTGAATCTTACAACGG+GGG | 0.724389 | 5_3:-15806791 | None:intergenic |
| GTTCAACGGGTGATGCAATG+GGG | 0.750923 | 5_3:+15810882 | Msa0801690:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTATTTTATATTTTTTTAA+AGG | - | chr5_3:15807549-15807568 | None:intergenic | 0.0% |
| !! | AAAAATATAAAATAATAAAA+TGG | + | chr5_3:15807553-15807572 | Msa0801690:intron | 0.0% |
| !!! | TTTCTACTATTTAATTTTAA+TGG | - | chr5_3:15809315-15809334 | None:intergenic | 10.0% |
| !! | AAAAAAAAAGGAAAATTAAA+TGG | + | chr5_3:15809769-15809788 | Msa0801690:intron | 10.0% |
| !!! | ATAAATTTTACTATTTTTGA+TGG | + | chr5_3:15812185-15812204 | Msa0801690:intron | 10.0% |
| !! | TATACATAAGTATAAATATT+AGG | + | chr5_3:15812694-15812713 | Msa0801690:intron | 10.0% |
| !!! | TTGAAATTTTGTTTACAAAT+TGG | + | chr5_3:15807650-15807669 | Msa0801690:intron | 15.0% |
| !!! | TTTTGATTTCATTACTTTTA+TGG | - | chr5_3:15807680-15807699 | None:intergenic | 15.0% |
| !! | CATACATATTATATGTTAAA+AGG | + | chr5_3:15808517-15808536 | Msa0801690:intron | 15.0% |
| !! | ATTATCAAATATGAAAACAA+TGG | + | chr5_3:15809715-15809734 | Msa0801690:intron | 15.0% |
| !! | AAAACAAGATAATAAATAGT+CGG | - | chr5_3:15812242-15812261 | None:intergenic | 15.0% |
| !! | TATAAATATTGATCTTTACA+AGG | + | chr5_3:15813097-15813116 | Msa0801690:intron | 15.0% |
| !! | ATAAATATTGATCTTTACAA+GGG | + | chr5_3:15813098-15813117 | Msa0801690:intron | 15.0% |
| !! | ATATATAAGTATGACTTATA+AGG | + | chr5_3:15813356-15813375 | Msa0801690:intron | 15.0% |
| !! | TATATAAGTATGACTTATAA+GGG | + | chr5_3:15813357-15813376 | Msa0801690:intron | 15.0% |
| !! | AACAAGATTAAAAACAATTA+GGG | - | chr5_3:15813785-15813804 | None:intergenic | 15.0% |
| !! | TAACAAGATTAAAAACAATT+AGG | - | chr5_3:15813786-15813805 | None:intergenic | 15.0% |
| !!! | ATTTGTTGAAATTACTCATT+TGG | + | chr5_3:15806939-15806958 | Msa0801690:intron | 20.0% |
| !!! | CACTACAATTTTTTTTATCA+TGG | - | chr5_3:15807093-15807112 | None:intergenic | 20.0% |
| !! | GATAACTAATGTAAAATGTA+CGG | - | chr5_3:15807183-15807202 | None:intergenic | 20.0% |
| !!! | TAGTTTTGAACATTATTACA+AGG | - | chr5_3:15807477-15807496 | None:intergenic | 20.0% |
| !!! | TAAAGATGAATTTTCCTATA+AGG | - | chr5_3:15807509-15807528 | None:intergenic | 20.0% |
| !! | AATGAAACAACTTGATAAAA+TGG | + | chr5_3:15807578-15807597 | Msa0801690:intron | 20.0% |
| !!! | TTGTTACTTGGTTAATATAT+TGG | - | chr5_3:15807891-15807910 | None:intergenic | 20.0% |
| !! | CAAAATAAAAATGACATTTC+TGG | + | chr5_3:15808880-15808899 | Msa0801690:intron | 20.0% |
| !! | TGAATATAACCTTATATTTG+TGG | - | chr5_3:15809468-15809487 | None:intergenic | 20.0% |
| !! | CAAATGTTAATGATTATATC+AGG | - | chr5_3:15809520-15809539 | None:intergenic | 20.0% |
| !! | AGCATTAGAAAGAAAAAAAA+AGG | + | chr5_3:15809757-15809776 | Msa0801690:intron | 20.0% |
| !!! | GATTAAGATTTTTTTTGAGT+AGG | - | chr5_3:15809992-15810011 | None:intergenic | 20.0% |
| !!! | AAGATGAAATAAGAATTTTC+AGG | - | chr5_3:15810133-15810152 | None:intergenic | 20.0% |
| !! | TAACCTAAAAAAAACCAAAA+AGG | + | chr5_3:15810203-15810222 | Msa0801690:intron | 20.0% |
| !!! | AATTTTTTCTTTCTCCTTTT+TGG | - | chr5_3:15810220-15810239 | None:intergenic | 20.0% |
| !! | AAGAATGAAAAATTGAAACT+TGG | + | chr5_3:15810256-15810275 | Msa0801690:intron | 20.0% |
| !! | CAAAATAGATTTATGTTTCA+CGG | - | chr5_3:15810582-15810601 | None:intergenic | 20.0% |
| !!! | ATTTGTTAAATGAATTGCAT+TGG | - | chr5_3:15810709-15810728 | None:intergenic | 20.0% |
| !! | CAATTCATTTAACAAATTGT+AGG | + | chr5_3:15810712-15810731 | Msa0801690:intron | 20.0% |
| !!! | GATTTCGAAATTCAAATTTT+TGG | + | chr5_3:15810746-15810765 | Msa0801690:intron | 20.0% |
| !! | CTTTAATCCTTTATATCTAA+TGG | - | chr5_3:15810823-15810842 | None:intergenic | 20.0% |
| !!! | TATATCTGGAAATTTTTGTT+CGG | + | chr5_3:15810982-15811001 | Msa0801690:CDS | 20.0% |
| !! | CATATAAATGTAGATACTAT+AGG | + | chr5_3:15811586-15811605 | Msa0801690:intron | 20.0% |
| !!! | AATTTGCTTATAATAGTGAT+CGG | - | chr5_3:15811628-15811647 | None:intergenic | 20.0% |
| !!! | TAAGCAAATTTTGACTTTTT+AGG | + | chr5_3:15811638-15811657 | Msa0801690:intron | 20.0% |
| !! | CATTCAATAAATTATGTATG+TGG | + | chr5_3:15811663-15811682 | Msa0801690:intron | 20.0% |
| !! | ATAGAAAGAAACTTCAATAT+AGG | + | chr5_3:15811804-15811823 | Msa0801690:intron | 20.0% |
| !! | ATGAGCATTTATTGAAAATA+TGG | + | chr5_3:15811845-15811864 | Msa0801690:intron | 20.0% |
| !! | ATAGTAAAATTTATCGTTCT+TGG | - | chr5_3:15812179-15812198 | None:intergenic | 20.0% |
| !! | AAGTTGAATGTTATAATTGT+TGG | + | chr5_3:15812361-15812380 | Msa0801690:intron | 20.0% |
| !! | TTCATATTAAAACTTGACTA+CGG | - | chr5_3:15812589-15812608 | None:intergenic | 20.0% |
| !!! | GTCAAGTTTTAATATGAATT+AGG | + | chr5_3:15812591-15812610 | Msa0801690:intron | 20.0% |
| !! | ATTCGTTATTCAGTATATTT+CGG | + | chr5_3:15813064-15813083 | Msa0801690:intron | 20.0% |
| !! | TAATATCTATATTGATCTCA+AGG | - | chr5_3:15813138-15813157 | None:intergenic | 20.0% |
| !! | TTGAGATCAATATAGATATT+AGG | + | chr5_3:15813137-15813156 | Msa0801690:intron | 20.0% |
| !! | CATAAATATTATCATGGAAA+TGG | + | chr5_3:15813179-15813198 | Msa0801690:intron | 20.0% |
| !! | TTAATACTATAAACAATGAG+CGG | - | chr5_3:15813263-15813282 | None:intergenic | 20.0% |
| !! | ATATAAGTATGACTTATAAG+GGG | + | chr5_3:15813358-15813377 | Msa0801690:intron | 20.0% |
| !! | AAAATTACTAAACTCGTTAT+TGG | + | chr5_3:15813412-15813431 | Msa0801690:intron | 20.0% |
| !! | AAATTACTAAACTCGTTATT+GGG | + | chr5_3:15813413-15813432 | Msa0801690:intron | 20.0% |
| !! | ATAAACAGAAAAAAAACCAA+AGG | - | chr5_3:15813831-15813850 | None:intergenic | 20.0% |
| !!! | ACTTTTTGGTCACATATTTT+CGG | - | chr5_3:15806382-15806401 | None:intergenic | 25.0% |
| ! | TTTGACTACGATTCTATATT+AGG | + | chr5_3:15806568-15806587 | Msa0801690:intron | 25.0% |
| ! | TGTAAAGCTATTTATGTTTC+CGG | + | chr5_3:15806727-15806746 | Msa0801690:CDS | 25.0% |
| ! | TTTCTCTGCGATATTTATTT+AGG | + | chr5_3:15806975-15806994 | Msa0801690:intron | 25.0% |
| !! | TGTATCTCTATTATGCTTTT+TGG | - | chr5_3:15807322-15807341 | None:intergenic | 25.0% |
| ! | TACTTTCATGTTAGATTCAA+CGG | + | chr5_3:15807398-15807417 | Msa0801690:intron | 25.0% |
| ! | TGTACATTTGTAACGATTAT+AGG | - | chr5_3:15807764-15807783 | None:intergenic | 25.0% |
| ! | AATCGTTACAAATGTACAAA+TGG | + | chr5_3:15807766-15807785 | Msa0801690:intron | 25.0% |
| ! | TTACAAATGTACAAATGGTA+AGG | + | chr5_3:15807771-15807790 | Msa0801690:intron | 25.0% |
| ! | TACAAATGTACAAATGGTAA+GGG | + | chr5_3:15807772-15807791 | Msa0801690:intron | 25.0% |
| ! | ACTGAATTATAAACCTTAAC+AGG | + | chr5_3:15807797-15807816 | Msa0801690:intron | 25.0% |
| !!! | GTTTTTTGCTGGTTTTTATA+AGG | - | chr5_3:15807988-15808007 | None:intergenic | 25.0% |
| ! | AAATTAGAATTGATCTCACA+GGG | + | chr5_3:15808290-15808309 | Msa0801690:intron | 25.0% |
| ! | GAATATTTCATCTGCTAATA+TGG | - | chr5_3:15808362-15808381 | None:intergenic | 25.0% |
| ! | TTGGTTGTCAAAATTAAATG+AGG | - | chr5_3:15808664-15808683 | None:intergenic | 25.0% |
| ! | TCATTTGCAATTGAAGAAAA+TGG | + | chr5_3:15809007-15809026 | Msa0801690:intron | 25.0% |
| ! | CATTTGCAATTGAAGAAAAT+GGG | + | chr5_3:15809008-15809027 | Msa0801690:intron | 25.0% |
| ! | TGATTTAACCAATAAGAATC+AGG | + | chr5_3:15809580-15809599 | Msa0801690:intron | 25.0% |
| ! | TTTACTTTCCTGATTCTTAT+TGG | - | chr5_3:15809591-15809610 | None:intergenic | 25.0% |
| !!! | TTTTTTGAGTAGGAAGAATA+AGG | - | chr5_3:15809982-15810001 | None:intergenic | 25.0% |
| ! | ATCTTAATCAAGCTTAAACA+TGG | + | chr5_3:15810003-15810022 | Msa0801690:intron | 25.0% |
| ! | TTTCTAGATGTATCAAAAGA+AGG | + | chr5_3:15810035-15810054 | Msa0801690:intron | 25.0% |
| ! | TTCTAGATGTATCAAAAGAA+GGG | + | chr5_3:15810036-15810055 | Msa0801690:intron | 25.0% |
| !!! | AAGAATTTTCAGGTATGAAT+TGG | - | chr5_3:15810123-15810142 | None:intergenic | 25.0% |
| !!! | TCTCCTTTTTGGTTTTTTTT+AGG | - | chr5_3:15810209-15810228 | None:intergenic | 25.0% |
| ! | TGGAGAATGATTTAATCAAA+TGG | + | chr5_3:15810276-15810295 | Msa0801690:intron | 25.0% |
| ! | GGAGAATGATTTAATCAAAT+GGG | + | chr5_3:15810277-15810296 | Msa0801690:intron | 25.0% |
| !! | TTGTTTTCTTTTCTTTTTCC+TGG | + | chr5_3:15810525-15810544 | Msa0801690:intron | 25.0% |
| ! | TTCATTTAACAAATTGTAGG+AGG | + | chr5_3:15810715-15810734 | Msa0801690:intron | 25.0% |
| ! | TCATTTAACAAATTGTAGGA+GGG | + | chr5_3:15810716-15810735 | Msa0801690:intron | 25.0% |
| !!! | ATTTTTGGAGCCATAAAATT+AGG | + | chr5_3:15810761-15810780 | Msa0801690:intron | 25.0% |
| !! | AAACCCTAAACCTAATTTTA+TGG | - | chr5_3:15810774-15810793 | None:intergenic | 25.0% |
| !! | ATAAAATTAGGTTTAGGGTT+TGG | + | chr5_3:15810773-15810792 | Msa0801690:intron | 25.0% |
| ! | TTTGCAACCATTAGATATAA+AGG | + | chr5_3:15810813-15810832 | Msa0801690:intron | 25.0% |
| ! | TATACCAATAACATCCATAT+CGG | - | chr5_3:15810966-15810985 | None:intergenic | 25.0% |
| !!! | TATTGTTTCTGCAATTTACT+TGG | + | chr5_3:15811201-15811220 | Msa0801690:intron | 25.0% |
| !!! | CTAAATTTACTTGGTGTTAA+AGG | + | chr5_3:15811385-15811404 | Msa0801690:CDS | 25.0% |
| ! | CATTCAATAAATGATGTATG+TGG | - | chr5_3:15811702-15811721 | None:intergenic | 25.0% |
| !! | AATTTGCTTATAATAGTGAC+CGG | + | chr5_3:15811737-15811756 | Msa0801690:intron | 25.0% |
| !! | TACAACACAATTAAAAGTAC+AGG | - | chr5_3:15812087-15812106 | None:intergenic | 25.0% |
| ! | TACATGAACTATCTATTCTA+GGG | - | chr5_3:15812499-15812518 | None:intergenic | 25.0% |
| ! | TTACATGAACTATCTATTCT+AGG | - | chr5_3:15812500-15812519 | None:intergenic | 25.0% |
| ! | ATAACAGGAGATATATCTTT+AGG | + | chr5_3:15812971-15812990 | Msa0801690:intron | 25.0% |
| !!! | TATCTCATATTGACTTAGTT+CGG | - | chr5_3:15813036-15813055 | None:intergenic | 25.0% |
| ! | ACTAAGTCAATATGAGATAT+TGG | + | chr5_3:15813037-15813056 | Msa0801690:intron | 25.0% |
| ! | TTCGTTATTCAGTATATTTC+GGG | + | chr5_3:15813065-15813084 | Msa0801690:intron | 25.0% |
| ! | CAATATAGATATTAGGACAA+AGG | + | chr5_3:15813144-15813163 | Msa0801690:intron | 25.0% |
| ! | CGTACACATAAATATTATCA+TGG | + | chr5_3:15813173-15813192 | Msa0801690:intron | 25.0% |
| ! | TATATCTATCTCTAATCCTT+TGG | + | chr5_3:15813812-15813831 | Msa0801690:intron | 25.0% |
| !! | ATCTCTATTATGCTTTTTGG+TGG | - | chr5_3:15807319-15807338 | None:intergenic | 30.0% |
| AATATTGACCTTAAGACATC+TGG | + | chr5_3:15807365-15807384 | Msa0801690:intron | 30.0% | |
| ATATTGACCTTAAGACATCT+GGG | + | chr5_3:15807366-15807385 | Msa0801690:intron | 30.0% | |
| AACTATAGCTTATGCCTTAT+AGG | + | chr5_3:15807492-15807511 | Msa0801690:intron | 30.0% | |
| !! | GATGAATGCAATTTTGTTTC+AGG | - | chr5_3:15807608-15807627 | None:intergenic | 30.0% |
| ACGATTATAGGTTCGTATAA+AGG | - | chr5_3:15807752-15807771 | None:intergenic | 30.0% | |
| !! | CATTGATTTACCTTTCTTAG+AGG | - | chr5_3:15807829-15807848 | None:intergenic | 30.0% |
| ! | TTTTCTGCTAAGTTTTTTGC+TGG | - | chr5_3:15807999-15808018 | None:intergenic | 30.0% |
| AGATTTGTAGGATTGTTGAA+GGG | - | chr5_3:15808082-15808101 | None:intergenic | 30.0% | |
| !! | TTTGTTGTTTGCAGATTTGT+AGG | - | chr5_3:15808094-15808113 | None:intergenic | 30.0% |
| ! | TTTTGAGCTTTTTGACAGTA+GGG | - | chr5_3:15808247-15808266 | None:intergenic | 30.0% |
| !! | TTTTTGAGCTTTTTGACAGT+AGG | - | chr5_3:15808248-15808267 | None:intergenic | 30.0% |
| CTGTGAGATCAATTCTAATT+TGG | - | chr5_3:15808291-15808310 | None:intergenic | 30.0% | |
| CAAATTAGAATTGATCTCAC+AGG | + | chr5_3:15808289-15808308 | Msa0801690:intron | 30.0% | |
| TCTGCTAATATGGTTATTGT+AGG | - | chr5_3:15808352-15808371 | None:intergenic | 30.0% | |
| ! | GTCAATTCTTGATGGTTATA+TGG | - | chr5_3:15808384-15808403 | None:intergenic | 30.0% |
| !! | TCTCTAAAGTCAATTCTTGA+TGG | - | chr5_3:15808392-15808411 | None:intergenic | 30.0% |
| ATAATGCTCTACTAGATGTA+TGG | - | chr5_3:15808445-15808464 | None:intergenic | 30.0% | |
| ! | AGTAGAGCATTATAATCAGA+TGG | + | chr5_3:15808452-15808471 | Msa0801690:intron | 30.0% |
| GGCTAAATGAATATTGTTTG+AGG | - | chr5_3:15808546-15808565 | None:intergenic | 30.0% | |
| !!! | TTCCTTTTCATTGTTGACTT+TGG | - | chr5_3:15808567-15808586 | None:intergenic | 30.0% |
| ATTAAATGAGCTTTCCAACT+TGG | - | chr5_3:15808624-15808643 | None:intergenic | 30.0% | |
| !! | CGTAATAATTTGTTCCATTG+AGG | + | chr5_3:15808982-15809001 | Msa0801690:intron | 30.0% |
| CAGTTACATATTGAATAGCA+AGG | + | chr5_3:15809181-15809200 | Msa0801690:intron | 30.0% | |
| TTCGACATAGATGAACAAAA+TGG | + | chr5_3:15809236-15809255 | Msa0801690:intron | 30.0% | |
| TCGACATAGATGAACAAAAT+GGG | + | chr5_3:15809237-15809256 | Msa0801690:intron | 30.0% | |
| CTTTAGTAGCCACAAATATA+AGG | + | chr5_3:15809456-15809475 | Msa0801690:intron | 30.0% | |
| ! | AGTTTTTGCCTCTTAACATT+GGG | - | chr5_3:15809873-15809892 | None:intergenic | 30.0% |
| ! | AAGTTTTTGCCTCTTAACAT+TGG | - | chr5_3:15809874-15809893 | None:intergenic | 30.0% |
| !! | CATTGGTTTGATATAACTCT+TGG | - | chr5_3:15810692-15810711 | None:intergenic | 30.0% |
| GAGCCATAAAATTAGGTTTA+GGG | + | chr5_3:15810768-15810787 | Msa0801690:intron | 30.0% | |
| ATAAAGGATTAAAGCGACTA+TGG | + | chr5_3:15810829-15810848 | Msa0801690:intron | 30.0% | |
| ATACCAATAACATCCATATC+GGG | - | chr5_3:15810965-15810984 | None:intergenic | 30.0% | |
| ATGGATGTTATTGGTATATC+TGG | + | chr5_3:15810968-15810987 | Msa0801690:CDS | 30.0% | |
| AACATGCTAAAAAACCTTAC+TGG | + | chr5_3:15811130-15811149 | Msa0801690:CDS | 30.0% | |
| TCAGCTTGTCTAAATTTACT+TGG | + | chr5_3:15811376-15811395 | Msa0801690:CDS | 30.0% | |
| TAGATCTGTTGTATTTCATG+TGG | - | chr5_3:15811531-15811550 | None:intergenic | 30.0% | |
| !!! | TAAGACCAAGAATTTTGGTT+TGG | + | chr5_3:15811910-15811929 | Msa0801690:intron | 30.0% |
| !! | GTATTGATCTTTTTGCAATG+AGG | + | chr5_3:15812325-15812344 | Msa0801690:intron | 30.0% |
| AACATAAACTATTGACCTCT+AGG | - | chr5_3:15812394-15812413 | None:intergenic | 30.0% | |
| CATACTATGTAGTATTCTCA+CGG | - | chr5_3:15812746-15812765 | None:intergenic | 30.0% | |
| ! | TTTTACAGACAACGATAGAA+TGG | - | chr5_3:15812868-15812887 | None:intergenic | 30.0% |
| ATTCTATCGTTGTCTGTAAA+AGG | + | chr5_3:15812867-15812886 | Msa0801690:intron | 30.0% | |
| TAAAAGGATAACCATAACGT+TGG | + | chr5_3:15812883-15812902 | Msa0801690:intron | 30.0% | |
| TACTTGATGAATCATGTTGA+GGG | + | chr5_3:15812914-15812933 | Msa0801690:intron | 30.0% | |
| AAAATGACTGTAAAACTGCA+TGG | + | chr5_3:15813005-15813024 | Msa0801690:intron | 30.0% | |
| !! | ATGTTTTGTTCTCCTTTAAG+AGG | + | chr5_3:15813570-15813589 | Msa0801690:intron | 30.0% |
| ATCCTCTCTTCAACTTTAAT+GGG | + | chr5_3:15813615-15813634 | Msa0801690:intron | 30.0% | |
| !!! | CAACTTTAATGGGTTTTTCA+TGG | + | chr5_3:15813625-15813644 | Msa0801690:intron | 30.0% |
| ! | TTTTGGTCACATATTTTCGG+TGG | - | chr5_3:15806379-15806398 | None:intergenic | 35.0% |
| TGACCAAAAAGTTATGTCCA+TGG | + | chr5_3:15806390-15806409 | Msa0801690:CDS | 35.0% | |
| ! | CTTCCATGGACATAACTTTT+TGG | - | chr5_3:15806396-15806415 | None:intergenic | 35.0% |
| ! | AATAGCTTTACAGCCTCTAT+TGG | - | chr5_3:15806719-15806738 | None:intergenic | 35.0% |
| AAAGCTATTTATGTTTCCGG+TGG | + | chr5_3:15806730-15806749 | Msa0801690:CDS | 35.0% | |
| ! | TTTCAACTGAGAAGCTCTTT+TGG | - | chr5_3:15806818-15806837 | None:intergenic | 35.0% |
| ! | GAGAGGGAATCAAAATTTTG+AGG | - | chr5_3:15806856-15806875 | None:intergenic | 35.0% |
| !!! | TTGAGCATGTTTTAGTCGAT+AGG | - | chr5_3:15807060-15807079 | None:intergenic | 35.0% |
| TTAGAGGTAGTTTCCTGTTA+AGG | - | chr5_3:15807813-15807832 | None:intergenic | 35.0% | |
| !!! | TTTTTGTTGTTTGACGTGGT+AGG | - | chr5_3:15807914-15807933 | None:intergenic | 35.0% |
| !!! | TACGTTGATTTTAGTGATGC+TGG | - | chr5_3:15807937-15807956 | None:intergenic | 35.0% |
| CAGATTTGTAGGATTGTTGA+AGG | - | chr5_3:15808083-15808102 | None:intergenic | 35.0% | |
| ! | CTGTCATTTGAAGCATCATT+TGG | - | chr5_3:15808178-15808197 | None:intergenic | 35.0% |
| CAAATGATGCTTCAAATGAC+AGG | + | chr5_3:15808176-15808195 | Msa0801690:intron | 35.0% | |
| ! | TTTGAGCTTTTTGACAGTAG+GGG | - | chr5_3:15808246-15808265 | None:intergenic | 35.0% |
| AGATGTATGGCAAACATAGT+TGG | - | chr5_3:15808432-15808451 | None:intergenic | 35.0% | |
| ! | ATCAGATGGTAACGTGATAT+AGG | + | chr5_3:15808466-15808485 | Msa0801690:intron | 35.0% |
| AGCCAAAGTCAACAATGAAA+AGG | + | chr5_3:15808562-15808581 | Msa0801690:intron | 35.0% | |
| GCAAGTGTAAATAGAGAAGA+TGG | + | chr5_3:15808590-15808609 | Msa0801690:intron | 35.0% | |
| !! | CAACTCTGGAATTAGTTGAT+TGG | - | chr5_3:15808683-15808702 | None:intergenic | 35.0% |
| CTCTATCAAGAAACATTTGC+AGG | - | chr5_3:15808707-15808726 | None:intergenic | 35.0% | |
| AATTGCAAATGAGACCTCAA+TGG | - | chr5_3:15808999-15809018 | None:intergenic | 35.0% | |
| ATGTCATGAATGCACGAAAT+AGG | + | chr5_3:15809056-15809075 | Msa0801690:intron | 35.0% | |
| TGTCATGAATGCACGAAATA+GGG | + | chr5_3:15809057-15809076 | Msa0801690:intron | 35.0% | |
| GAAATAGGGAATATGTGGAA+GGG | + | chr5_3:15809071-15809090 | Msa0801690:intron | 35.0% | |
| AAATTCCAAATCTCACTCTC+AGG | - | chr5_3:15809108-15809127 | None:intergenic | 35.0% | |
| GTGGCTACTAAAGAATGATT+TGG | - | chr5_3:15809449-15809468 | None:intergenic | 35.0% | |
| ! | GGTTATATTCACTCTTTTGC+AGG | + | chr5_3:15809477-15809496 | Msa0801690:intron | 35.0% |
| TCTTCTTCCTCAAATCAGAA+CGG | - | chr5_3:15810326-15810345 | None:intergenic | 35.0% | |
| ! | TTTGAGGAAGAAGAAAGTGT+TGG | + | chr5_3:15810332-15810351 | Msa0801690:intron | 35.0% |
| !! | TTGAGGAAGAAGAAAGTGTT+GGG | + | chr5_3:15810333-15810352 | Msa0801690:intron | 35.0% |
| TTATGTTTCACGGCTGAATA+AGG | - | chr5_3:15810572-15810591 | None:intergenic | 35.0% | |
| AACCTATATGACATGTACCT+AGG | + | chr5_3:15810626-15810645 | Msa0801690:intron | 35.0% | |
| TTTCCACTGACAATAAATGG+CGG | - | chr5_3:15810667-15810686 | None:intergenic | 35.0% | |
| GGAGCCATAAAATTAGGTTT+AGG | + | chr5_3:15810767-15810786 | Msa0801690:intron | 35.0% | |
| CACTAGATTCACTTGTTCAA+CGG | + | chr5_3:15810868-15810887 | Msa0801690:CDS | 35.0% | |
| ACTAGATTCACTTGTTCAAC+GGG | + | chr5_3:15810869-15810888 | Msa0801690:CDS | 35.0% | |
| AACATCCATATCGGGAAAAT+CGG | - | chr5_3:15810957-15810976 | None:intergenic | 35.0% | |
| TTTCCCGATATGGATGTTAT+TGG | + | chr5_3:15810959-15810978 | Msa0801690:CDS | 35.0% | |
| TGCTTATAATAGTGATCGGA+GGG | - | chr5_3:15811624-15811643 | None:intergenic | 35.0% | |
| TTGCTTATAATAGTGATCGG+AGG | - | chr5_3:15811625-15811644 | None:intergenic | 35.0% | |
| ! | TAGTCCACACAAGATTTTCT+CGG | - | chr5_3:15811892-15811911 | None:intergenic | 35.0% |
| ! | TGGACTAAGACCAAGAATTT+TGG | + | chr5_3:15811905-15811924 | Msa0801690:intron | 35.0% |
| TGTGACCAAACCAAAATTCT+TGG | - | chr5_3:15812030-15812049 | None:intergenic | 35.0% | |
| !!! | CAGGACTAAGAATTTTGGTT+TGG | - | chr5_3:15812038-15812057 | None:intergenic | 35.0% |
| ! | TGGATCAGGACTAAGAATTT+TGG | - | chr5_3:15812043-15812062 | None:intergenic | 35.0% |
| ! | ATAACCATAACGTTGGTTGA+TGG | + | chr5_3:15812890-15812909 | Msa0801690:intron | 35.0% |
| ! | TAACCATAACGTTGGTTGAT+GGG | + | chr5_3:15812891-15812910 | Msa0801690:intron | 35.0% |
| GTACTTGATGAATCATGTTG+AGG | + | chr5_3:15812913-15812932 | Msa0801690:intron | 35.0% | |
| TATATCTCCTGTTATGACGA+GGG | - | chr5_3:15812966-15812985 | None:intergenic | 35.0% | |
| ATATATCTCCTGTTATGACG+AGG | - | chr5_3:15812967-15812986 | None:intergenic | 35.0% | |
| ! | ACTTGACATTCTTGTCACTT+GGG | + | chr5_3:15813214-15813233 | Msa0801690:intron | 35.0% |
| CATTAAAGTTGAAGAGAGGA+TGG | - | chr5_3:15813616-15813635 | None:intergenic | 35.0% | |
| CATCCTCTCTTCAACTTTAA+TGG | + | chr5_3:15813614-15813633 | Msa0801690:intron | 35.0% | |
| AACCCATTAAAGTTGAAGAG+AGG | - | chr5_3:15813620-15813639 | None:intergenic | 35.0% | |
| !! | AAGTGTTGACATGATCTACA+CGG | - | chr5_3:15813762-15813781 | None:intergenic | 35.0% |
| TTGGATTCAAGCGAGTAAGA+CGG | - | chr5_3:15806457-15806476 | None:intergenic | 40.0% | |
| AACTGCTTGGTTCCTAATCA+TGG | - | chr5_3:15806503-15806522 | None:intergenic | 40.0% | |
| TAAACCTTCAAGTGACCTTC+CGG | - | chr5_3:15806536-15806555 | None:intergenic | 40.0% | |
| TCGTAGTCAAAACCTTCCAT+CGG | - | chr5_3:15806559-15806578 | None:intergenic | 40.0% | |
| GGAATCTGAACAAACCCTAT+CGG | - | chr5_3:15806610-15806629 | None:intergenic | 40.0% | |
| ! | GATAGGGTTTGTTCAGATTC+CGG | + | chr5_3:15806609-15806628 | Msa0801690:intron | 40.0% |
| ! | CTTGTTGAAAGTGTGAGAGA+GGG | - | chr5_3:15806872-15806891 | None:intergenic | 40.0% |
| ! | ACTTGTTGAAAGTGTGAGAG+AGG | - | chr5_3:15806873-15806892 | None:intergenic | 40.0% |
| AGTAAGACCCAGATGTCTTA+AGG | - | chr5_3:15807376-15807395 | None:intergenic | 40.0% | |
| ! | CAGGAAACTACCTCTAAGAA+AGG | + | chr5_3:15807816-15807835 | Msa0801690:intron | 40.0% |
| !!! | CTGGTTTTTGTTGTTTGACG+TGG | - | chr5_3:15807918-15807937 | None:intergenic | 40.0% |
| ! | ATTTAAGTTACGCGCTCTAG+CGG | - | chr5_3:15808037-15808056 | None:intergenic | 40.0% |
| ! | TGACAGTAGGGGAAGTTTTT+AGG | - | chr5_3:15808235-15808254 | None:intergenic | 40.0% |
| AATTGATCTCACAGGGAGTA+GGG | + | chr5_3:15808297-15808316 | Msa0801690:intron | 40.0% | |
| !!! | AGATGGTCACTTTTCCAAGT+TGG | + | chr5_3:15808607-15808626 | Msa0801690:intron | 40.0% |
| AAACATTTGCAGGTCAACTC+TGG | - | chr5_3:15808697-15808716 | None:intergenic | 40.0% | |
| TGCACGAAATAGGGAATATG+TGG | + | chr5_3:15809066-15809085 | Msa0801690:intron | 40.0% | |
| CGAAATAGGGAATATGTGGA+AGG | + | chr5_3:15809070-15809089 | Msa0801690:intron | 40.0% | |
| CTATACCTGAGAGTGAGATT+TGG | + | chr5_3:15809100-15809119 | Msa0801690:intron | 40.0% | |
| ! | CACACACATTTTCTGCTAAC+TGG | - | chr5_3:15809614-15809633 | None:intergenic | 40.0% |
| TGACAGAATGGAATCGATGT+TGG | - | chr5_3:15809835-15809854 | None:intergenic | 40.0% | |
| TGGAACAAGGTTTGACAGAA+TGG | - | chr5_3:15809847-15809866 | None:intergenic | 40.0% | |
| TAACATTGGGAGTTGGAACA+AGG | - | chr5_3:15809860-15809879 | None:intergenic | 40.0% | |
| TTCCAACTCCCAATGTTAAG+AGG | + | chr5_3:15809862-15809881 | Msa0801690:intron | 40.0% | |
| TAAGGCTGCACATTACATGA+AGG | - | chr5_3:15809964-15809983 | None:intergenic | 40.0% | |
| ! | TGTGAAACCGTTCTGATTTG+AGG | + | chr5_3:15810316-15810335 | Msa0801690:intron | 40.0% |
| GTCAGTGGAGATGAAATGAT+TGG | + | chr5_3:15810372-15810391 | Msa0801690:intron | 40.0% | |
| GGAGATGAAATGATTGGAGT+TGG | + | chr5_3:15810378-15810397 | Msa0801690:intron | 40.0% | |
| GGTTAACCAAGAGAGAGAAA+CGG | - | chr5_3:15810551-15810570 | None:intergenic | 40.0% | |
| CACCTAGGTACATGTCATAT+AGG | - | chr5_3:15810631-15810650 | None:intergenic | 40.0% | |
| GCCATTTATTGTCAGTGGAA+AGG | + | chr5_3:15810666-15810685 | Msa0801690:intron | 40.0% | |
| GCCTTTCCACTGACAATAAA+TGG | - | chr5_3:15810670-15810689 | None:intergenic | 40.0% | |
| CAAATTGTAGGAGGGAAAGT+TGG | + | chr5_3:15810724-15810743 | Msa0801690:intron | 40.0% | |
| ! | AGGTTTAGGGTTTGGCAATT+AGG | + | chr5_3:15810781-15810800 | Msa0801690:intron | 40.0% |
| ! | GGTTTAGGGTTTGGCAATTA+GGG | + | chr5_3:15810782-15810801 | Msa0801690:intron | 40.0% |
| !! | TCAAACCGATTTTCCCGATA+TGG | + | chr5_3:15810949-15810968 | Msa0801690:CDS | 40.0% |
| TGAATTGGATTGAAGGGAGA+GGG | + | chr5_3:15811023-15811042 | Msa0801690:CDS | 40.0% | |
| TGAGGCTGTAATAAAGGAAG+AGG | + | chr5_3:15811060-15811079 | Msa0801690:intron | 40.0% | |
| TCTGCAATTTACTTGGCTAC+AGG | + | chr5_3:15811208-15811227 | Msa0801690:intron | 40.0% | |
| GAACTTTCAACATTCTGAGC+AGG | - | chr5_3:15811241-15811260 | None:intergenic | 40.0% | |
| TTCTCACTGTATGACCATGA+TGG | + | chr5_3:15811258-15811277 | Msa0801690:CDS | 40.0% | |
| GCATAGTGACTGAGATATGA+AGG | - | chr5_3:15811306-15811325 | None:intergenic | 40.0% | |
| TTGCTTATAATAGTGACCGG+AGG | + | chr5_3:15811740-15811759 | Msa0801690:intron | 40.0% | |
| TGCAAGATTACTACTTCCTC+CGG | - | chr5_3:15811759-15811778 | None:intergenic | 40.0% | |
| TTTGCCGAGAAAATCTTGTG+TGG | + | chr5_3:15811885-15811904 | Msa0801690:intron | 40.0% | |
| AAAGTCGAGAAACACTTGTG+TGG | - | chr5_3:15812063-15812082 | None:intergenic | 40.0% | |
| ATTGTTGGTGTAAGTCCTAG+AGG | + | chr5_3:15812376-15812395 | Msa0801690:intron | 40.0% | |
| TATCTATGACCCATGAGATG+CGG | - | chr5_3:15812660-15812679 | None:intergenic | 40.0% | |
| CTATGTAGTATTCTCACGGT+GGG | - | chr5_3:15812742-15812761 | None:intergenic | 40.0% | |
| ACTATGTAGTATTCTCACGG+TGG | - | chr5_3:15812743-15812762 | None:intergenic | 40.0% | |
| CACTTGACATTCTTGTCACT+TGG | + | chr5_3:15813213-15813232 | Msa0801690:intron | 40.0% | |
| CAACGTGACTAGAACCTATA+GGG | + | chr5_3:15813305-15813324 | Msa0801690:intron | 40.0% | |
| TTCTTTGTGTGTGACCCTAT+AGG | - | chr5_3:15813322-15813341 | None:intergenic | 40.0% | |
| ATAGGGTCACACACAAAGAA+CGG | + | chr5_3:15813322-15813341 | Msa0801690:intron | 40.0% | |
| AAGGCAGAGAAGTCACTATT+GGG | - | chr5_3:15813449-15813468 | None:intergenic | 40.0% | |
| TAGCAGAGCTAAGTTAGGAA+GGG | - | chr5_3:15813490-15813509 | None:intergenic | 40.0% | |
| !! | TTCCTAACTTAGCTCTGCTA+GGG | + | chr5_3:15813490-15813509 | Msa0801690:intron | 40.0% |
| GGAAAACACTCTCCTCTTAA+AGG | - | chr5_3:15813585-15813604 | None:intergenic | 40.0% | |
| AGTTATGTCCATGGAAGACG+AGG | + | chr5_3:15806399-15806418 | Msa0801690:CDS | 45.0% | |
| TACTCGCTTGAATCCAAGCT+CGG | + | chr5_3:15806460-15806479 | Msa0801690:CDS | 45.0% | |
| CAAGCAGTTGAGAGAGTTAC+CGG | + | chr5_3:15806514-15806533 | Msa0801690:CDS | 45.0% | |
| GTCACTTGAAGGTTTACCGA+TGG | + | chr5_3:15806540-15806559 | Msa0801690:CDS | 45.0% | |
| CTTGAAGGTTTACCGATGGA+AGG | + | chr5_3:15806544-15806563 | Msa0801690:CDS | 45.0% | |
| AGTGTTGTGAGATGCCGATA+GGG | + | chr5_3:15806593-15806612 | Msa0801690:intron | 45.0% | |
| GCTTGCAACCAAACAACCTT+CGG | - | chr5_3:15806695-15806714 | None:intergenic | 45.0% | |
| TTGGTTGCAAGCACCAATAG+AGG | + | chr5_3:15806703-15806722 | Msa0801690:CDS | 45.0% | |
| GGAGTTGAATCTTACAACGG+GGG | - | chr5_3:15806794-15806813 | None:intergenic | 45.0% | |
| CGGAGTTGAATCTTACAACG+GGG | - | chr5_3:15806795-15806814 | None:intergenic | 45.0% | |
| GCGGAGTTGAATCTTACAAC+GGG | - | chr5_3:15806796-15806815 | None:intergenic | 45.0% | |
| GGCGGAGTTGAATCTTACAA+CGG | - | chr5_3:15806797-15806816 | None:intergenic | 45.0% | |
| ! | CAACTGAGAAGCTCTTTTGG+CGG | - | chr5_3:15806815-15806834 | None:intergenic | 45.0% |
| TGACGTGGTAGGTTGTTACT+TGG | - | chr5_3:15807903-15807922 | None:intergenic | 45.0% | |
| ! | CTCTAGCGGACAGATTTAGT+AGG | - | chr5_3:15808023-15808042 | None:intergenic | 45.0% |
| GCTAGAGCGCGTAACTTAAA+TGG | + | chr5_3:15808036-15808055 | Msa0801690:intron | 45.0% | |
| TAGGATTGTTGAAGGGCTTC+AGG | - | chr5_3:15808075-15808094 | None:intergenic | 45.0% | |
| GAATTGATCTCACAGGGAGT+AGG | + | chr5_3:15808296-15808315 | Msa0801690:intron | 45.0% | |
| TAGGCGTGTCTCATGATGTT+GGG | - | chr5_3:15808333-15808352 | None:intergenic | 45.0% | |
| AGACATTTGCAGGTCAACTC+TGG | - | chr5_3:15808772-15808791 | None:intergenic | 45.0% | |
| GACCTGCAAATGTCTCTTGA+TGG | + | chr5_3:15808777-15808796 | Msa0801690:intron | 45.0% | |
| CTCCATCAAGAGACATTTGC+AGG | - | chr5_3:15808782-15808801 | None:intergenic | 45.0% | |
| TGCCTCTTAACATTGGGAGT+TGG | - | chr5_3:15809867-15809886 | None:intergenic | 45.0% | |
| TCCATTCCAACATATGCAGC+TGG | + | chr5_3:15810179-15810198 | Msa0801690:intron | 45.0% | |
| ACCAGCTGCATATGTTGGAA+TGG | - | chr5_3:15810183-15810202 | None:intergenic | 45.0% | |
| GGTTAACCAGCTGCATATGT+TGG | - | chr5_3:15810188-15810207 | None:intergenic | 45.0% | |
| !! | GGAAGAAGAAAGTGTTGGGT+CGG | + | chr5_3:15810337-15810356 | Msa0801690:intron | 45.0% |
| !! | AGAAAGTGTTGGGTCGGAAT+CGG | + | chr5_3:15810343-15810362 | Msa0801690:intron | 45.0% |
| ATGACATGTACCTAGGTGCA+TGG | + | chr5_3:15810633-15810652 | Msa0801690:intron | 45.0% | |
| AGACCGCCATTTATTGTCAG+TGG | + | chr5_3:15810661-15810680 | Msa0801690:intron | 45.0% | |
| AGGATTAAAGCGACTATGGC+AGG | + | chr5_3:15810833-15810852 | Msa0801690:intron | 45.0% | |
| TTGTTCAACGGGTGATGCAA+TGG | + | chr5_3:15810880-15810899 | Msa0801690:CDS | 45.0% | |
| TGTTCAACGGGTGATGCAAT+GGG | + | chr5_3:15810881-15810900 | Msa0801690:CDS | 45.0% | |
| TGATGCAATGGGGATGAACA+TGG | + | chr5_3:15810892-15810911 | Msa0801690:CDS | 45.0% | |
| ! | GGGATGAACATGGTATCGAA+AGG | + | chr5_3:15810902-15810921 | Msa0801690:CDS | 45.0% |
| TTGTTCGGACAAGAAAGCTG+CGG | + | chr5_3:15810997-15811016 | Msa0801690:CDS | 45.0% | |
| CGGCAGTGAATTGGATTGAA+GGG | + | chr5_3:15811017-15811036 | Msa0801690:CDS | 45.0% | |
| GTGAATTGGATTGAAGGGAG+AGG | + | chr5_3:15811022-15811041 | Msa0801690:CDS | 45.0% | |
| GGTGTGTGAGGCTGTAATAA+AGG | + | chr5_3:15811054-15811073 | Msa0801690:intron | 45.0% | |
| GGCTGTAATAAAGGAAGAGG+TGG | + | chr5_3:15811063-15811082 | Msa0801690:intron | 45.0% | |
| !! | GAAAGTGCTGAAGACTAGTG+TGG | + | chr5_3:15811090-15811109 | Msa0801690:CDS | 45.0% |
| GAAGACTAGTGTGGAGTCTT+TGG | + | chr5_3:15811099-15811118 | Msa0801690:CDS | 45.0% | |
| !! | AAACCTTACTGGTTCAGCCA+TGG | + | chr5_3:15811141-15811160 | Msa0801690:CDS | 45.0% |
| ! | ATGATGGAAGCCGTGAATGA+CGG | + | chr5_3:15811274-15811293 | Msa0801690:CDS | 45.0% |
| AAGGTCCTTTCCGTCATTCA+CGG | - | chr5_3:15811287-15811306 | None:intergenic | 45.0% | |
| AGTCACTATGCCTTCCATTG+AGG | + | chr5_3:15811315-15811334 | Msa0801690:CDS | 45.0% | |
| ACTATGCCTTCCATTGAGGT+GGG | + | chr5_3:15811319-15811338 | Msa0801690:CDS | 45.0% | |
| TACTATAGTTGCCAGTTGCC+TGG | - | chr5_3:15811440-15811459 | None:intergenic | 45.0% | |
| CAACTGGCAACTATAGTAGC+TGG | + | chr5_3:15811442-15811461 | Msa0801690:intron | 45.0% | |
| ! | GTGGCTTTTAACAAGTTGCC+CGG | - | chr5_3:15811512-15811531 | None:intergenic | 45.0% |
| ACCAAAGTTGCTTCATGAGC+TGG | + | chr5_3:15811562-15811581 | Msa0801690:intron | 45.0% | |
| TCCAGCTCATGAAGCAACTT+TGG | - | chr5_3:15811566-15811585 | None:intergenic | 45.0% | |
| CGGCAAAGTCGCATACTAAA+TGG | - | chr5_3:15811872-15811891 | None:intergenic | 45.0% | |
| AGAGAGAAGAGAGAAGAGAG+AGG | + | chr5_3:15811943-15811962 | Msa0801690:intron | 45.0% | |
| GAGAGAAGAGAAGAGAGAGA+AGG | + | chr5_3:15811992-15812011 | Msa0801690:intron | 45.0% | |
| GAGAAACACTTGTGTGGATC+AGG | - | chr5_3:15812057-15812076 | None:intergenic | 45.0% | |
| GTACCCATCAACCAACGTTA+TGG | - | chr5_3:15812897-15812916 | None:intergenic | 45.0% | |
| GATTTGTCCCTCGTCATAAC+AGG | + | chr5_3:15812956-15812975 | Msa0801690:intron | 45.0% | |
| ! | CCTATAGGTTCTAGTCACGT+TGG | - | chr5_3:15813307-15813326 | None:intergenic | 45.0% |
| CCAACGTGACTAGAACCTAT+AGG | + | chr5_3:15813304-15813323 | Msa0801690:intron | 45.0% | |
| GAAGGCAGAGAAGTCACTAT+TGG | - | chr5_3:15813450-15813469 | None:intergenic | 45.0% | |
| !! | GGGTGAAAGTTCTAGAGAGA+AGG | - | chr5_3:15813468-15813487 | None:intergenic | 45.0% |
| AGCAGAGCTAAGTTAGGAAG+GGG | - | chr5_3:15813489-15813508 | None:intergenic | 45.0% | |
| CTAGCAGAGCTAAGTTAGGA+AGG | - | chr5_3:15813491-15813510 | None:intergenic | 45.0% | |
| !! | CTTCCTAACTTAGCTCTGCT+AGG | + | chr5_3:15813489-15813508 | Msa0801690:intron | 45.0% |
| AACCCTAGCAGAGCTAAGTT+AGG | - | chr5_3:15813495-15813514 | None:intergenic | 45.0% | |
| ! | TAGGATGTTTTGTCACGGCT+AGG | + | chr5_3:15813547-15813566 | Msa0801690:intron | 45.0% |
| GAAGAGAGGATGGATGAACA+GGG | - | chr5_3:15813606-15813625 | None:intergenic | 45.0% | |
| TGAAGAGAGGATGGATGAAC+AGG | - | chr5_3:15813607-15813626 | None:intergenic | 45.0% | |
| TTGACATGATCTACACGGTG+GGG | - | chr5_3:15813757-15813776 | None:intergenic | 45.0% | |
| GTTGACATGATCTACACGGT+GGG | - | chr5_3:15813758-15813777 | None:intergenic | 45.0% | |
| TGTTGACATGATCTACACGG+TGG | - | chr5_3:15813759-15813778 | None:intergenic | 45.0% | |
| !!! | TTTTATTATTGAATAATATA+TGG | + | chr5_3:15812437-15812456 | Msa0801690:intron | 5.0% |
| TATGTCCATGGAAGACGAGG+AGG | + | chr5_3:15806402-15806421 | Msa0801690:CDS | 50.0% | |
| ATGGAAGACGAGGAGGTTGT+CGG | + | chr5_3:15806409-15806428 | Msa0801690:CDS | 50.0% | |
| TCCTAATCATGGCTGCACGT+CGG | - | chr5_3:15806492-15806511 | None:intergenic | 50.0% | |
| CGGTAACTCTCTCAACTGCT+TGG | - | chr5_3:15806516-15806535 | None:intergenic | 50.0% | |
| CAGTTGAGAGAGTTACCGGA+AGG | + | chr5_3:15806518-15806537 | Msa0801690:CDS | 50.0% | |
| GTTACCGGAAGGTCACTTGA+AGG | + | chr5_3:15806529-15806548 | Msa0801690:CDS | 50.0% | |
| CAGTGTTGTGAGATGCCGAT+AGG | + | chr5_3:15806592-15806611 | Msa0801690:intron | 50.0% | |
| ! | GGGTTTGTTCAGATTCCGGT+AGG | + | chr5_3:15806613-15806632 | Msa0801690:intron | 50.0% |
| TCATTCCCGTCGAGCAACAA+AGG | - | chr5_3:15806649-15806668 | None:intergenic | 50.0% | |
| TGCAACCAAACAACCTTCGG+TGG | - | chr5_3:15806692-15806711 | None:intergenic | 50.0% | |
| ! | TTTTGACCCGTGCTATCGCA+CGG | + | chr5_3:15807032-15807051 | Msa0801690:intron | 50.0% |
| ATAGGATCCGTGCGATAGCA+CGG | - | chr5_3:15807042-15807061 | None:intergenic | 50.0% | |
| TTGTTGAAGGGCTTCAGGTG+TGG | - | chr5_3:15808070-15808089 | None:intergenic | 50.0% | |
| GTGTCTCATGATGTTGGGAG+CGG | - | chr5_3:15808328-15808347 | None:intergenic | 50.0% | |
| GTAGGCGTGTCTCATGATGT+TGG | - | chr5_3:15808334-15808353 | None:intergenic | 50.0% | |
| TTCCTTGCATCGCTGCATCT+TGG | - | chr5_3:15809394-15809413 | None:intergenic | 50.0% | |
| GGCTGCACATTACATGAAGG+TGG | - | chr5_3:15809961-15809980 | None:intergenic | 50.0% | |
| GATGTCGTCGACGATTTCAC+CGG | - | chr5_3:15810475-15810494 | None:intergenic | 50.0% | |
| ! | GGTCTGTTTTCCATGCACCT+AGG | - | chr5_3:15810646-15810665 | None:intergenic | 50.0% |
| GTTCAACGGGTGATGCAATG+GGG | + | chr5_3:15810882-15810901 | Msa0801690:CDS | 50.0% | |
| AGAAAGCTGCGGCAGTGAAT+TGG | + | chr5_3:15811008-15811027 | Msa0801690:CDS | 50.0% | |
| GCGGCAGTGAATTGGATTGA+AGG | + | chr5_3:15811016-15811035 | Msa0801690:CDS | 50.0% | |
| TGAAGGGAGAGGGAAATCAG+TGG | + | chr5_3:15811033-15811052 | Msa0801690:CDS | 50.0% | |
| AGGGAAATCAGTGGTGTGTG+AGG | + | chr5_3:15811042-15811061 | Msa0801690:intron | 50.0% | |
| GTCATTCACGGCTTCCATCA+TGG | - | chr5_3:15811275-15811294 | None:intergenic | 50.0% | |
| CACTATGCCTTCCATTGAGG+TGG | + | chr5_3:15811318-15811337 | Msa0801690:CDS | 50.0% | |
| GGAGCTAGTAAAGAGACTCC+AGG | + | chr5_3:15811406-15811425 | Msa0801690:CDS | 50.0% | |
| AGACTCCAGGAGCAAATTCC+AGG | + | chr5_3:15811419-15811438 | Msa0801690:CDS | 50.0% | |
| ! | AGTTGCCTGGAATTTGCTCC+TGG | - | chr5_3:15811427-15811446 | None:intergenic | 50.0% |
| AGGAGCAAATTCCAGGCAAC+TGG | + | chr5_3:15811426-15811445 | Msa0801690:CDS | 50.0% | |
| CTCATGTCTGCAATTGCAGC+CGG | + | chr5_3:15811490-15811509 | Msa0801690:intron | 50.0% | |
| TCATGTCTGCAATTGCAGCC+GGG | + | chr5_3:15811491-15811510 | Msa0801690:intron | 50.0% | |
| AGACTGATGACCGCATCTCA+TGG | + | chr5_3:15812647-15812666 | Msa0801690:intron | 50.0% | |
| GACTGATGACCGCATCTCAT+GGG | + | chr5_3:15812648-15812667 | Msa0801690:intron | 50.0% | |
| CCAGGGATCATAGTGGTTTC+AGG | - | chr5_3:15812822-15812841 | None:intergenic | 50.0% | |
| CCTGAAACCACTATGATCCC+TGG | + | chr5_3:15812819-15812838 | Msa0801690:intron | 50.0% | |
| ACCACTATGATCCCTGGATG+TGG | + | chr5_3:15812825-15812844 | Msa0801690:intron | 50.0% | |
| TCCACATCCAGGGATCATAG+TGG | - | chr5_3:15812829-15812848 | None:intergenic | 50.0% | |
| AGCACTTGAGTCCACATCCA+GGG | - | chr5_3:15812839-15812858 | None:intergenic | 50.0% | |
| AAGCACTTGAGTCCACATCC+AGG | - | chr5_3:15812840-15812859 | None:intergenic | 50.0% | |
| AGGGACATGAGTGTCCTAGA+TGG | + | chr5_3:15812933-15812952 | Msa0801690:intron | 50.0% | |
| GGGACATGAGTGTCCTAGAT+GGG | + | chr5_3:15812934-15812953 | Msa0801690:intron | 50.0% | |
| ACGAGGGACAAATCCCATCT+AGG | - | chr5_3:15812950-15812969 | None:intergenic | 50.0% | |
| GCAGAGCTAAGTTAGGAAGG+GGG | - | chr5_3:15813488-15813507 | None:intergenic | 50.0% | |
| GACAAAACATCCTAGCCGGA+GGG | - | chr5_3:15813541-15813560 | None:intergenic | 50.0% | |
| TGACAAAACATCCTAGCCGG+AGG | - | chr5_3:15813542-15813561 | None:intergenic | 50.0% | |
| CCGTGACAAAACATCCTAGC+CGG | - | chr5_3:15813545-15813564 | None:intergenic | 50.0% | |
| ! | CCGGCTAGGATGTTTTGTCA+CGG | + | chr5_3:15813542-15813561 | Msa0801690:intron | 50.0% |
| TGACATGATCTACACGGTGG+GGG | - | chr5_3:15813756-15813775 | None:intergenic | 50.0% | |
| GACAACCTCCTCGTCTTCCA+TGG | - | chr5_3:15806410-15806429 | None:intergenic | 55.0% | |
| ! | CAGATTCCGGTAGGTGTTGC+CGG | + | chr5_3:15806622-15806641 | Msa0801690:intron | 55.0% |
| AAAGGACCGGCAACACCTAC+CGG | - | chr5_3:15806631-15806650 | None:intergenic | 55.0% | |
| GCTCGACGGGAATGAGTACA+CGG | + | chr5_3:15806654-15806673 | Msa0801690:CDS | 55.0% | |
| ! | GAATGAGTACACGGTGCCGA+TGG | + | chr5_3:15806663-15806682 | Msa0801690:CDS | 55.0% |
| CAACCTTCGGTGGTTGCCAT+CGG | - | chr5_3:15806682-15806701 | None:intergenic | 55.0% | |
| GGCAACCACCGAAGGTTGTT+TGG | + | chr5_3:15806684-15806703 | Msa0801690:CDS | 55.0% | |
| GAATCTTACAACGGGGGCTC+TGG | - | chr5_3:15806788-15806807 | None:intergenic | 55.0% | |
| TAGGATCCGTGCGATAGCAC+GGG | - | chr5_3:15807041-15807060 | None:intergenic | 55.0% | |
| GCTGCATCTTGGCACTGCTT+GGG | - | chr5_3:15809383-15809402 | None:intergenic | 55.0% | |
| TGCCAAGATGCAGCGATGCA+AGG | + | chr5_3:15809389-15809408 | Msa0801690:intron | 55.0% | |
| TGTTGGGTCGGAATCGGAGA+CGG | + | chr5_3:15810349-15810368 | Msa0801690:intron | 55.0% | |
| !! | ATTGGAGTTGGTGCCGCCAT+GGG | + | chr5_3:15810390-15810409 | Msa0801690:intron | 55.0% |
| !! | CATGGGTGATGGTGGTGACA+CGG | + | chr5_3:15810407-15810426 | Msa0801690:intron | 55.0% |
| !! | ATGGGTGATGGTGGTGACAC+GGG | + | chr5_3:15810408-15810427 | Msa0801690:intron | 55.0% |
| TTCTGCTGCAACGTCGCTCA+CGG | + | chr5_3:15810441-15810460 | Msa0801690:intron | 55.0% | |
| TCCTGGCCGTTTCTCTCTCT+TGG | + | chr5_3:15810542-15810561 | Msa0801690:intron | 55.0% | |
| ACCAAGAGAGAGAAACGGCC+AGG | - | chr5_3:15810546-15810565 | None:intergenic | 55.0% | |
| CAGCCATGGCTGAACCAGTA+AGG | - | chr5_3:15811147-15811166 | None:intergenic | 55.0% | |
| !! | CTTACTGGTTCAGCCATGGC+TGG | + | chr5_3:15811145-15811164 | Msa0801690:CDS | 55.0% |
| ! | GGAAGCCGTGAATGACGGAA+AGG | + | chr5_3:15811279-15811298 | Msa0801690:CDS | 55.0% |
| ACTGTGCCCACCTCAATGGA+AGG | - | chr5_3:15811328-15811347 | None:intergenic | 55.0% | |
| TCCATTGAGGTGGGCACAGT+AGG | + | chr5_3:15811328-15811347 | Msa0801690:CDS | 55.0% | |
| TCCTACTGTGCCCACCTCAA+TGG | - | chr5_3:15811332-15811351 | None:intergenic | 55.0% | |
| ATTGAGGTGGGCACAGTAGG+AGG | + | chr5_3:15811331-15811350 | Msa0801690:CDS | 55.0% | |
| TTGAGGTGGGCACAGTAGGA+GGG | + | chr5_3:15811332-15811351 | Msa0801690:CDS | 55.0% | |
| ! | GTAGCTGGTTCAGTCCTTGC+AGG | + | chr5_3:15811457-15811476 | Msa0801690:intron | 55.0% |
| TGAGTGAGAGCTCTCCTGCA+AGG | - | chr5_3:15811474-15811493 | None:intergenic | 55.0% | |
| TGGAGAGGAGATGTGGAGGT+CGG | - | chr5_3:15813658-15813677 | None:intergenic | 55.0% | |
| TCTGGTGTGGAGAGGAGATG+TGG | - | chr5_3:15813665-15813684 | None:intergenic | 55.0% | |
| AGACGAGGAGGTTGTCGGTG+CGG | + | chr5_3:15806414-15806433 | Msa0801690:CDS | 60.0% | |
| GGTTGTCGGTGCGGTGGTAT+CGG | + | chr5_3:15806423-15806442 | Msa0801690:CDS | 60.0% | |
| GTTGTCGGTGCGGTGGTATC+GGG | + | chr5_3:15806424-15806443 | Msa0801690:CDS | 60.0% | |
| ACGTCGGCAATCTCCGAGCT+TGG | - | chr5_3:15806476-15806495 | None:intergenic | 60.0% | |
| GCCGACGTGCAGCCATGATT+AGG | + | chr5_3:15806488-15806507 | Msa0801690:CDS | 60.0% | |
| GCCGGTCCTTTGTTGCTCGA+CGG | + | chr5_3:15806640-15806659 | Msa0801690:CDS | 60.0% | |
| CCCGTCGAGCAACAAAGGAC+CGG | - | chr5_3:15806644-15806663 | None:intergenic | 60.0% | |
| CCGGTCCTTTGTTGCTCGAC+GGG | + | chr5_3:15806641-15806660 | Msa0801690:CDS | 60.0% | |
| CATTCCGTCGCGGAGCACAA+CGG | - | chr5_3:15806764-15806783 | None:intergenic | 60.0% | |
| CGCTGCATCTTGGCACTGCT+TGG | - | chr5_3:15809384-15809403 | None:intergenic | 60.0% | |
| GTTGGGTCGGAATCGGAGAC+GGG | + | chr5_3:15810350-15810369 | Msa0801690:intron | 60.0% | |
| !! | GATTGGAGTTGGTGCCGCCA+TGG | + | chr5_3:15810389-15810408 | Msa0801690:intron | 60.0% |
| GTCACCACCATCACCCATGG+CGG | - | chr5_3:15810406-15810425 | None:intergenic | 60.0% | |
| CGTGTCACCACCATCACCCA+TGG | - | chr5_3:15810409-15810428 | None:intergenic | 60.0% | |
| !! | TGGGTGATGGTGGTGACACG+GGG | + | chr5_3:15810409-15810428 | Msa0801690:intron | 60.0% |
| TGCAACGTCGCTCACGGTGA+TGG | + | chr5_3:15810447-15810466 | Msa0801690:intron | 60.0% | |
| TCAGCCATGGCTGGTGCTCT+TGG | + | chr5_3:15811154-15811173 | Msa0801690:CDS | 60.0% | |
| TGAGGTGGGCACAGTAGGAG+GGG | + | chr5_3:15811333-15811352 | Msa0801690:CDS | 60.0% | |
| CGGAGGGTTGAGCGACGTTA+GGG | - | chr5_3:15813525-15813544 | None:intergenic | 60.0% | |
| CCTAACGTCGCTCAACCCTC+CGG | + | chr5_3:15813523-15813542 | Msa0801690:intron | 60.0% | |
| GGTGTGGAGAGGAGATGTGG+AGG | - | chr5_3:15813662-15813681 | None:intergenic | 60.0% | |
| GACGGAGATCTGGTGTGGAG+AGG | - | chr5_3:15813673-15813692 | None:intergenic | 60.0% | |
| CCACACCAGATCTCCGTCCA+CGG | + | chr5_3:15813675-15813694 | Msa0801690:intron | 60.0% | |
| AACCACCGTGGACGGAGATC+TGG | - | chr5_3:15813683-15813702 | None:intergenic | 60.0% | |
| ATCTCCGTCCACGGTGGTTG+TGG | + | chr5_3:15813684-15813703 | Msa0801690:intron | 60.0% | |
| TCTCCGTCCACGGTGGTTGT+GGG | + | chr5_3:15813685-15813704 | Msa0801690:intron | 60.0% | |
| ATCGGCGCAGGAGATTGGGT+GGG | - | chr5_3:15813717-15813736 | None:intergenic | 60.0% | |
| ! | GTGCCGATGGCAACCACCGA+AGG | + | chr5_3:15806676-15806695 | Msa0801690:CDS | 65.0% |
| !! | CACAACGGCGGAAGCACCAC+CGG | - | chr5_3:15806749-15806768 | None:intergenic | 65.0% |
| ! | GGGCTCTGGTCATTCCGTCG+CGG | - | chr5_3:15806774-15806793 | None:intergenic | 65.0% |
| CGGAATCGGAGACGGGTCAG+TGG | + | chr5_3:15810357-15810376 | Msa0801690:intron | 65.0% | |
| !! | GTTGGTGCCGCCATGGGTGA+TGG | + | chr5_3:15810396-15810415 | Msa0801690:intron | 65.0% |
| !! | GGGTGATGGTGGTGACACGG+GGG | + | chr5_3:15810410-15810429 | Msa0801690:intron | 65.0% |
| ! | GTCGCTCACGGTGATGGCTC+CGG | + | chr5_3:15810453-15810472 | Msa0801690:intron | 65.0% |
| GCCATGGCTGGTGCTCTTGG+CGG | + | chr5_3:15811157-15811176 | Msa0801690:CDS | 65.0% | |
| GAGGTGGGCACAGTAGGAGG+GGG | + | chr5_3:15811334-15811353 | Msa0801690:CDS | 65.0% | |
| CCGGAGGGTTGAGCGACGTT+AGG | - | chr5_3:15813526-15813545 | None:intergenic | 65.0% | |
| CCGTGGACGGAGATCTGGTG+TGG | - | chr5_3:15813678-15813697 | None:intergenic | 65.0% | |
| CACCAGATCTCCGTCCACGG+TGG | + | chr5_3:15813678-15813697 | Msa0801690:intron | 65.0% | |
| CGACCCACAACCACCGTGGA+CGG | - | chr5_3:15813691-15813710 | None:intergenic | 65.0% | |
| GTAGCGACCCACAACCACCG+TGG | - | chr5_3:15813695-15813714 | None:intergenic | 65.0% | |
| GATCGGCGCAGGAGATTGGG+TGG | - | chr5_3:15813718-15813737 | None:intergenic | 65.0% | |
| CCGGATCGGCGCAGGAGATT+GGG | - | chr5_3:15813721-15813740 | None:intergenic | 65.0% | |
| ! | CCCAATCTCCTGCGCCGATC+CGG | + | chr5_3:15813718-15813737 | Msa0801690:intron | 65.0% |
| GATCTACACGGTGGGGGCTC+CGG | - | chr5_3:15813750-15813769 | None:intergenic | 65.0% | |
| CGAGGAGGTTGTCGGTGCGG+TGG | + | chr5_3:15806417-15806436 | Msa0801690:CDS | 70.0% | |
| TCCGCCGTTGTGCTCCGCGA+CGG | + | chr5_3:15806757-15806776 | Msa0801690:CDS | 70.0% | |
| TCCGTCGCGGAGCACAACGG+CGG | - | chr5_3:15806761-15806780 | None:intergenic | 70.0% | |
| ! | GGTGCCGCCATGGGTGATGG+TGG | + | chr5_3:15810399-15810418 | Msa0801690:intron | 70.0% |
| !! | GCCGCCAAGAGCACCAGCCA+TGG | - | chr5_3:15811161-15811180 | None:intergenic | 70.0% |
| CGTCGCTCAACCCTCCGGCT+AGG | + | chr5_3:15813528-15813547 | Msa0801690:intron | 70.0% | |
| GCCGGATCGGCGCAGGAGAT+TGG | - | chr5_3:15813722-15813741 | None:intergenic | 70.0% | |
| TACACGGTGGGGGCTCCGGA+GGG | - | chr5_3:15813746-15813765 | None:intergenic | 70.0% | |
| ACACGGTGGGGGCTCCGGAG+GGG | - | chr5_3:15813745-15813764 | None:intergenic | 75.0% | |
| CTACACGGTGGGGGCTCCGG+AGG | - | chr5_3:15813747-15813766 | None:intergenic | 75.0% | |
| !! | TGCGCCGATCCGGCCCCCTC+CGG | + | chr5_3:15813728-15813747 | Msa0801690:intron | 80.0% |
| ! | GGCTCCGGAGGGGGCCGGAT+CGG | - | chr5_3:15813735-15813754 | None:intergenic | 80.0% |
| ! | CACGGTGGGGGCTCCGGAGG+GGG | - | chr5_3:15813744-15813763 | None:intergenic | 80.0% |
| ! | GGAGGGGGCCGGATCGGCGC+AGG | - | chr5_3:15813729-15813748 | None:intergenic | 85.0% |
| ! | GTGGGGGCTCCGGAGGGGGC+CGG | - | chr5_3:15813740-15813759 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 15806367 | 15813860 | 15806367 | ID=Msa0801690;Name=Msa0801690 |
| chr5_3 | mRNA | 15806367 | 15813860 | 15806367 | ID=Msa0801690-mRNA-1;Parent=Msa0801690;Name=Msa0801690-mRNA-1;_AED=0.38;_eAED=0.38;_QI=0|0|0|0.83|0|0|6|0|323 |
| chr5_3 | exon | 15806367 | 15806565 | 15806367 | ID=Msa0801690-mRNA-1:exon:6598;Parent=Msa0801690-mRNA-1 |
| chr5_3 | exon | 15806635 | 15806830 | 15806635 | ID=Msa0801690-mRNA-1:exon:6599;Parent=Msa0801690-mRNA-1 |
| chr5_3 | exon | 15810835 | 15811054 | 15810835 | ID=Msa0801690-mRNA-1:exon:6600;Parent=Msa0801690-mRNA-1 |
| chr5_3 | exon | 15811076 | 15811196 | 15811076 | ID=Msa0801690-mRNA-1:exon:6601;Parent=Msa0801690-mRNA-1 |
| chr5_3 | exon | 15811230 | 15811456 | 15811230 | ID=Msa0801690-mRNA-1:exon:6602;Parent=Msa0801690-mRNA-1 |
| chr5_3 | exon | 15813855 | 15813860 | 15813855 | ID=Msa0801690-mRNA-1:exon:6603;Parent=Msa0801690-mRNA-1 |
| chr5_3 | CDS | 15806367 | 15806565 | 15806367 | ID=Msa0801690-mRNA-1:cds;Parent=Msa0801690-mRNA-1 |
| chr5_3 | CDS | 15806635 | 15806830 | 15806635 | ID=Msa0801690-mRNA-1:cds;Parent=Msa0801690-mRNA-1 |
| chr5_3 | CDS | 15810835 | 15811054 | 15810835 | ID=Msa0801690-mRNA-1:cds;Parent=Msa0801690-mRNA-1 |
| chr5_3 | CDS | 15811076 | 15811196 | 15811076 | ID=Msa0801690-mRNA-1:cds;Parent=Msa0801690-mRNA-1 |
| chr5_3 | CDS | 15811230 | 15811456 | 15811230 | ID=Msa0801690-mRNA-1:cds;Parent=Msa0801690-mRNA-1 |
| chr5_3 | CDS | 15813855 | 15813860 | 15813855 | ID=Msa0801690-mRNA-1:cds;Parent=Msa0801690-mRNA-1 |
| Gene Sequence |
| Protein sequence |
