Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0840050 | XP_003612563.1 | 97.410 | 502 | 9 | 2 | 1 | 499 | 1 | 501 | 0.0 | 1003 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0840050 | sp|P29057|HMDH1_HEVBR | 73.800 | 500 | 105 | 1 | 25 | 498 | 34 | 533 | 0.0 | 769 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0840050 | A0A396HQ53 | 97.410 | 502 | 9 | 2 | 1 | 499 | 1 | 501 | 0.0 | 1003 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0760260 | Msa0840050 | 0.808252 | 3.392481e-50 | -8.615850e-47 |
| Msa0760330 | Msa0840050 | 0.812903 | 3.354451e-51 | -8.615850e-47 |
| Msa0801680 | Msa0840050 | 0.899937 | 1.208195e-77 | -8.615850e-47 |
| Msa0801690 | Msa0840050 | 0.847236 | 1.313775e-59 | -8.615850e-47 |
| Msa0840040 | Msa0840050 | 0.883653 | 3.739194e-71 | -8.615850e-47 |
| Msa0840050 | Msa0903020 | 0.823599 | 1.270272e-53 | -8.615850e-47 |
| Msa0840050 | Msa1029850 | 0.800155 | 1.645807e-48 | -8.615850e-47 |
| Msa0840050 | Msa1263110 | 0.810041 | 1.404075e-50 | -8.615850e-47 |
| Msa0840050 | Msa1303550 | 0.806374 | 8.486206e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0840050 | MtrunA17_Chr5g0409021 | 97.410 | 502 | 9 | 2 | 1 | 499 | 1 | 501 | 0.0 | 1003 |
| Msa0840050 | MtrunA17_Chr5g0408991 | 97.410 | 502 | 9 | 2 | 1 | 499 | 1 | 501 | 0.0 | 1003 |
| Msa0840050 | MtrunA17_Chr5g0409001 | 97.410 | 502 | 9 | 2 | 1 | 499 | 1 | 501 | 0.0 | 1003 |
| Msa0840050 | MtrunA17_Chr5g0409011 | 97.410 | 502 | 9 | 2 | 1 | 499 | 1 | 501 | 0.0 | 1003 |
| Msa0840050 | MtrunA17_Chr5g0408981 | 97.410 | 502 | 9 | 2 | 1 | 499 | 1 | 501 | 0.0 | 1003 |
| Msa0840050 | MtrunA17_Chr5g0442831 | 89.349 | 507 | 43 | 5 | 1 | 499 | 1 | 504 | 0.0 | 922 |
| Msa0840050 | MtrunA17_Chr5g0409031 | 91.749 | 509 | 32 | 3 | 1 | 499 | 1 | 509 | 0.0 | 919 |
| Msa0840050 | MtrunA17_Chr5g0407521 | 83.650 | 526 | 59 | 6 | 1 | 499 | 1 | 526 | 0.0 | 889 |
| Msa0840050 | MtrunA17_Chr8g0370001 | 76.786 | 504 | 93 | 6 | 20 | 499 | 39 | 542 | 0.0 | 788 |
| Msa0840050 | MtrunA17_Chr5g0440371 | 74.127 | 487 | 109 | 3 | 25 | 499 | 43 | 524 | 0.0 | 732 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0840050 | AT1G76490.1 | 71.487 | 491 | 124 | 1 | 25 | 499 | 105 | 595 | 0.0 | 746 |
| Msa0840050 | AT2G17370.1 | 67.677 | 495 | 144 | 4 | 16 | 498 | 27 | 517 | 0.0 | 705 |
Find 161 sgRNAs with CRISPR-Local
Find 364 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTAAATTTACTTGGTGTTAA+AGG | 0.164546 | 5_4:-15608325 | Msa0840050:CDS |
| GTGAATCCTCCTGCTTCTTT+TGG | 0.210539 | 5_4:+15609818 | None:intergenic |
| TTTGACTACGATTCTATATT+AGG | 0.222070 | 5_4:-15609331 | Msa0840050:CDS |
| TGTAAAGCTATTTATGTTTC+CGG | 0.222759 | 5_4:-15609172 | Msa0840050:CDS |
| TTTCCCGATATGGATGTTAT+TGG | 0.267972 | 5_4:-15608751 | Msa0840050:CDS |
| GGGAATATGAGTGAGGAATA+AGG | 0.285211 | 5_4:+15610056 | None:intergenic |
| TTTCAACTGAGAAGCTCTTT+TGG | 0.287869 | 5_4:+15609084 | None:intergenic |
| ATGGATGTTATTGGCATATC+TGG | 0.300555 | 5_4:-15608742 | Msa0840050:CDS |
| CCGGTCCTTTGTTGCTCGAC+GGG | 0.332695 | 5_4:-15609258 | Msa0840050:CDS |
| TATTTATAGACAGAGTATTC+AGG | 0.335888 | 5_4:+15610035 | None:intergenic |
| GAAGACTAGTGTGGAGTCTT+TGG | 0.337986 | 5_4:-15608611 | Msa0840050:CDS |
| AATAGCTTTACAGCCTCTAT+TGG | 0.352070 | 5_4:+15609183 | None:intergenic |
| CAGATTCCGGTAGGTGTTGC+CGG | 0.353294 | 5_4:-15609277 | Msa0840050:CDS |
| AGACTCCAGGAGCAAATTCC+AGG | 0.354489 | 5_4:-15608291 | Msa0840050:CDS |
| TTCGGTGGTGGTAGCTTCTT+CGG | 0.359048 | 5_4:+15609538 | None:intergenic |
| TATTGTTTCTGCAATTTACT+TGG | 0.362082 | 5_4:-15608509 | Msa0840050:CDS |
| ACTTGCCTGGAATTTGCTCC+TGG | 0.368083 | 5_4:+15608286 | None:intergenic |
| AGAAAGCTGCGGCAGTGAAT+TGG | 0.369757 | 5_4:-15608702 | Msa0840050:CDS |
| CAAGCAGTTGAGAGAGTTAC+CGG | 0.376087 | 5_4:-15609385 | Msa0840050:CDS |
| GGTTGTCGGTGCGGTGGTAT+CGG | 0.377254 | 5_4:-15609476 | Msa0840050:CDS |
| TCGCCTACTTTCTTCTCAAC+AGG | 0.377563 | 5_4:-15609744 | Msa0840050:CDS |
| TCAGCCATGGCTGGTGCTCT+TGG | 0.377924 | 5_4:-15608556 | Msa0840050:CDS |
| GGCAACCACCGAAGGTTGTT+TGG | 0.379682 | 5_4:-15609215 | Msa0840050:CDS |
| GATAGGGTTTGTTCAGATTC+CGG | 0.381461 | 5_4:-15609290 | Msa0840050:CDS |
| GTCTACCTTATCACTTTCTT+CGG | 0.381652 | 5_4:-15609634 | Msa0840050:CDS |
| AACATCCATATCGGGAAAAT+CGG | 0.385940 | 5_4:+15608756 | None:intergenic |
| AAAGGAGTTCAGCTCGGTTC+AGG | 0.388651 | 5_4:+15609954 | None:intergenic |
| ACAAAGTATTAAAGCGACTA+TGG | 0.395740 | 5_4:-15608881 | Msa0840050:CDS |
| GTAGCTGGTTCAGTCCTTGC+AGG | 0.399623 | 5_4:-15608254 | Msa0840050:exon |
| CTTCTTGTTCATCGTAATGA+AGG | 0.402904 | 5_4:+15609599 | None:intergenic |
| TATGCCAATAACATCCATAT+CGG | 0.409497 | 5_4:+15608747 | None:intergenic |
| TAAACCTTCAAGTGACCTTC+CGG | 0.419965 | 5_4:+15609366 | None:intergenic |
| GTTGTCGGTGCGGTGGTATC+GGG | 0.422716 | 5_4:-15609475 | Msa0840050:CDS |
| CACAACGGCGGAAGCACCAC+CGG | 0.431698 | 5_4:+15609153 | None:intergenic |
| ACTAGATTCACTTGTTCAAC+GGG | 0.437170 | 5_4:-15608841 | Msa0840050:CDS |
| CTCATGTCTGCAATTGCAGC+CGG | 0.440156 | 5_4:-15608221 | Msa0840050:three_prime_UTR |
| CTACGTAGTTGCCACTTGCC+TGG | 0.443366 | 5_4:+15608273 | None:intergenic |
| GGAATATGAGTGAGGAATAA+GGG | 0.443764 | 5_4:+15610057 | None:intergenic |
| TCTCAGAGATTGTGAGGACT+TGG | 0.444866 | 5_4:+15609689 | None:intergenic |
| TGTTCAACGGGTGATGCAAT+GGG | 0.450595 | 5_4:-15608829 | Msa0840050:CDS |
| GCCGGTCCTTTGTTGCTCGA+CGG | 0.452645 | 5_4:-15609259 | Msa0840050:CDS |
| AACTGCTTGGTTCCTAATCA+TGG | 0.452670 | 5_4:+15609399 | None:intergenic |
| GCCGACGTGCAGCCATGATT+AGG | 0.455535 | 5_4:-15609411 | Msa0840050:CDS |
| AAGGTCCTTTCCGTCATTCA+CGG | 0.465602 | 5_4:+15608426 | None:intergenic |
| TCAGCTTGTCTAAATTTACT+TGG | 0.470739 | 5_4:-15608334 | Msa0840050:CDS |
| TCCAGCTCATGAAGCAACTT+TGG | 0.470851 | 5_4:+15608148 | None:intergenic |
| TCCTACTGTGCCCACCTCAA+TGG | 0.473062 | 5_4:+15608381 | None:intergenic |
| TCTGCAATTTACTTGGCTAC+AGG | 0.474139 | 5_4:-15608502 | Msa0840050:CDS |
| ATTGAGGTGGGCACAGTAGG+AGG | 0.475464 | 5_4:-15608379 | Msa0840050:CDS |
| ACCAAAGTTGCTTCATGAGC+TGG | 0.476922 | 5_4:-15608149 | Msa0840050:three_prime_UTR |
| AAGGAGTTCAGCTCGGTTCA+GGG | 0.478998 | 5_4:+15609955 | None:intergenic |
| TTCAGGGGATGATTGATGAT+TGG | 0.479107 | 5_4:+15609971 | None:intergenic |
| GCCATGGCTGGTGCTCTTGG+CGG | 0.483639 | 5_4:-15608553 | Msa0840050:CDS |
| GCGGAGTTGAATCTTACAAC+GGG | 0.487921 | 5_4:+15609106 | None:intergenic |
| CACTAGATTCACTTGTTCAA+CGG | 0.489118 | 5_4:-15608842 | Msa0840050:CDS |
| CTTGGAGAGGTGTAGAGGTT+CGG | 0.490394 | 5_4:+15609707 | None:intergenic |
| GTGAATTGGATTGAAGGGAG+AGG | 0.493977 | 5_4:-15608688 | Msa0840050:CDS |
| TTGTTCAACGGGTGATGCAA+TGG | 0.497983 | 5_4:-15608830 | Msa0840050:CDS |
| AGTATTAAAGCGACTATGGC+AGG | 0.498529 | 5_4:-15608877 | Msa0840050:CDS |
| GCTTGCAACCAAACAACCTT+CGG | 0.498750 | 5_4:+15609207 | None:intergenic |
| GACAACCTCCTCGTCTTCCA+TGG | 0.499603 | 5_4:+15609492 | None:intergenic |
| TCTCTCTGGTTATTATGTGA+AGG | 0.504346 | 5_4:+15609893 | None:intergenic |
| ATTTATAGACAGAGTATTCA+GGG | 0.504848 | 5_4:+15610036 | None:intergenic |
| CTTCGGCAAGACACCTTGAG+TGG | 0.505421 | 5_4:+15609555 | None:intergenic |
| TGAGGTGGGCACAGTAGGAG+GGG | 0.507780 | 5_4:-15608377 | Msa0840050:CDS |
| GTCATTCACGGCTTCCATCA+TGG | 0.509060 | 5_4:+15608438 | None:intergenic |
| ATGGAAGACGAGGAGGTTGT+CGG | 0.511840 | 5_4:-15609490 | Msa0840050:CDS |
| GAAGAAGAACCAAAAGAAGC+AGG | 0.514129 | 5_4:-15609827 | Msa0840050:CDS |
| TTGAGGTGGGCACAGTAGGA+GGG | 0.514782 | 5_4:-15608378 | Msa0840050:CDS |
| CACTATGCCTTCCATTGAGG+TGG | 0.515478 | 5_4:-15608392 | Msa0840050:CDS |
| GAACTTTCAACATTCTGAGC+AGG | 0.515798 | 5_4:+15608472 | None:intergenic |
| GCAAGTGGCAACTACGTAGC+TGG | 0.516279 | 5_4:-15608269 | Msa0840050:exon |
| TAGATCTGTTGTATTTCATG+TGG | 0.517155 | 5_4:+15608183 | None:intergenic |
| AAAGGACCGGCAACACCTAC+CGG | 0.524381 | 5_4:+15609271 | None:intergenic |
| GTTACCGGAAGGTCACTTGA+AGG | 0.524733 | 5_4:-15609370 | Msa0840050:CDS |
| ATGCCAATAACATCCATATC+GGG | 0.526585 | 5_4:+15608748 | None:intergenic |
| GCGGCAGTGAATTGGATTGA+AGG | 0.530179 | 5_4:-15608694 | Msa0840050:CDS |
| GCCGCCAAGAGCACCAGCCA+TGG | 0.530980 | 5_4:+15608552 | None:intergenic |
| TCCGCCGTTGTGGTCCGCGA+CGG | 0.533235 | 5_4:-15609142 | Msa0840050:CDS |
| CTTACTGGTTCAGCCATGGC+TGG | 0.534747 | 5_4:-15608565 | Msa0840050:CDS |
| GCATAGTGACTGAGATATGA+AGG | 0.538116 | 5_4:+15608407 | None:intergenic |
| CGGTAACTCTCTCAACTGCT+TGG | 0.539523 | 5_4:+15609386 | None:intergenic |
| AAAATAAAAGAAAGAAACAA+AGG | 0.539898 | 5_4:+15609936 | None:intergenic |
| CGGTGGTGCTTCCGCCGTTG+TGG | 0.542278 | 5_4:-15609152 | Msa0840050:CDS |
| CAGCCATGGCTGAACCAGTA+AGG | 0.543116 | 5_4:+15608566 | None:intergenic |
| TGAATTGGATTGAAGGGAGA+GGG | 0.544400 | 5_4:-15608687 | Msa0840050:CDS |
| TTGGTTGCAAGCACCAATAG+AGG | 0.544821 | 5_4:-15609196 | Msa0840050:CDS |
| GGTGTGTGAGGCTGTAATAA+AGG | 0.545187 | 5_4:-15608656 | Msa0840050:CDS |
| TCCATTGAGGTGGGCACAGT+AGG | 0.547051 | 5_4:-15608382 | Msa0840050:CDS |
| CCACCTGTTGAGAAGAAAGT+AGG | 0.548746 | 5_4:+15609741 | None:intergenic |
| CCCGTCGAGCAACAAAGGAC+CGG | 0.551690 | 5_4:+15609258 | None:intergenic |
| CAGTGTTGTGAGATGCCGAT+AGG | 0.554170 | 5_4:-15609307 | Msa0840050:CDS |
| TACTCGCTTGAATCCAAGCT+CGG | 0.557539 | 5_4:-15609439 | Msa0840050:CDS |
| ACGTCGGCAATCTCCGAGCT+TGG | 0.557698 | 5_4:+15609426 | None:intergenic |
| CTTGAAGGTTTACCGATGGA+AGG | 0.561666 | 5_4:-15609355 | Msa0840050:CDS |
| ATGATGGAAGCCGTGAATGA+CGG | 0.562542 | 5_4:-15608436 | Msa0840050:CDS |
| CAACCTTCGGTGGTTGCCAT+CGG | 0.562844 | 5_4:+15609220 | None:intergenic |
| ATGAACTCGTGAACAACGAG+AGG | 0.563339 | 5_4:+15610145 | None:intergenic |
| GATTATTTATCTCACACTTG+TGG | 0.568010 | 5_4:+15608109 | None:intergenic |
| GTCACTTGAAGGTTTACCGA+TGG | 0.569033 | 5_4:-15609359 | Msa0840050:CDS |
| TTCATCGTAATGAAGGATGA+AGG | 0.570197 | 5_4:+15609606 | None:intergenic |
| AGTGTTGTGAGATGCCGATA+GGG | 0.570212 | 5_4:-15609306 | Msa0840050:CDS |
| GTAGACAAAGGAAGCGATGA+GGG | 0.571349 | 5_4:+15609651 | None:intergenic |
| CAATGCCGAAGAAAGTGATA+AGG | 0.571966 | 5_4:+15609629 | None:intergenic |
| TTCTCACTGTATGACCATGA+TGG | 0.576680 | 5_4:-15608452 | Msa0840050:CDS |
| ACTTGTTGAAAGTGTGAGAG+AGG | 0.576972 | 5_4:+15609029 | None:intergenic |
| CGAGAATCTCAGAGATTGTG+AGG | 0.577330 | 5_4:+15609683 | None:intergenic |
| GTGCCGATGGCAACCACCGA+AGG | 0.578946 | 5_4:-15609223 | Msa0840050:CDS |
| GAAAGTGATAAGGTAGACAA+AGG | 0.579162 | 5_4:+15609639 | None:intergenic |
| TCATGTCTGCAATTGCAGCC+GGG | 0.579236 | 5_4:-15608220 | Msa0840050:three_prime_UTR |
| AGTCACTATGCCTTCCATTG+AGG | 0.579598 | 5_4:-15608395 | Msa0840050:CDS |
| CGGCAGTGAATTGGATTGAA+GGG | 0.579892 | 5_4:-15608693 | Msa0840050:CDS |
| CGAGGAGGTTGTCGGTGCGG+TGG | 0.586335 | 5_4:-15609482 | Msa0840050:CDS |
| GGGTTTGTTCAGATTCCGGT+AGG | 0.587024 | 5_4:-15609286 | Msa0840050:CDS |
| GGCTGTAATAAAGGAAGAGG+TGG | 0.590912 | 5_4:-15608647 | Msa0840050:CDS |
| CCTACTTTCTTCTCAACAGG+TGG | 0.592173 | 5_4:-15609741 | Msa0840050:CDS |
| GGAGCTAGTAAAGAGACTCC+AGG | 0.592509 | 5_4:-15608304 | Msa0840050:CDS |
| TCATTCCCGTCGAGCAACAA+AGG | 0.592806 | 5_4:+15609253 | None:intergenic |
| AAACCTTACTGGTTCAGCCA+TGG | 0.593436 | 5_4:-15608569 | Msa0840050:CDS |
| GAGGACTTGGAGAGGTGTAG+AGG | 0.595532 | 5_4:+15609702 | None:intergenic |
| GAGGTGGGCACAGTAGGAGG+GGG | 0.595689 | 5_4:-15608376 | Msa0840050:CDS |
| TGCAACCAAACAACCTTCGG+TGG | 0.597240 | 5_4:+15609210 | None:intergenic |
| CTTGTTGAAAGTGTGAGAGA+GGG | 0.609060 | 5_4:+15609030 | None:intergenic |
| AGGAGTTCAGCTCGGTTCAG+GGG | 0.609892 | 5_4:+15609956 | None:intergenic |
| GAATGAGTACACGGTGCCGA+TGG | 0.611062 | 5_4:-15609236 | Msa0840050:CDS |
| ACTGTGCCCACCTCAATGGA+AGG | 0.611639 | 5_4:+15608385 | None:intergenic |
| AGGAGCAAATTCCAGGCAAG+TGG | 0.613811 | 5_4:-15608284 | Msa0840050:CDS |
| TGAGGCTGTAATAAAGGAAG+AGG | 0.613924 | 5_4:-15608650 | Msa0840050:CDS |
| CATTCCGTCGCGGACCACAA+CGG | 0.615932 | 5_4:+15609138 | None:intergenic |
| TGAGTGAGAGCTCTCCTGCA+AGG | 0.619208 | 5_4:+15608240 | None:intergenic |
| GGAAGCCGTGAATGACGGAA+AGG | 0.619681 | 5_4:-15608431 | Msa0840050:CDS |
| TGATGCAATGGGGATGAACA+TGG | 0.620753 | 5_4:-15608818 | Msa0840050:CDS |
| GGCGGAGTTGAATCTTACAA+CGG | 0.622253 | 5_4:+15609105 | None:intergenic |
| GGAATCTGAACAAACCCTAT+CGG | 0.627662 | 5_4:+15609292 | None:intergenic |
| TCGTAGTCAAAACCTTCCAT+CGG | 0.628308 | 5_4:+15609343 | None:intergenic |
| ACTATGCCTTCCATTGAGGT+GGG | 0.631117 | 5_4:-15608391 | Msa0840050:CDS |
| AGACGAGGAGGTTGTCGGTG+CGG | 0.634747 | 5_4:-15609485 | Msa0840050:CDS |
| GGGATGAACATGGTATCGAA+AGG | 0.641709 | 5_4:-15608808 | Msa0840050:CDS |
| AAAGCTATTTATGTTTCCGG+TGG | 0.645691 | 5_4:-15609169 | Msa0840050:CDS |
| GAAGAACCAAAAGAAGCAGG+AGG | 0.646116 | 5_4:-15609824 | Msa0840050:CDS |
| AGAAACAAAGGAGTTCAGCT+CGG | 0.647208 | 5_4:+15609948 | None:intergenic |
| AGTTATGTCCATGGAAGACG+AGG | 0.649583 | 5_4:-15609500 | Msa0840050:CDS |
| TTGGATTCAAGCGAGTAAGA+CGG | 0.650574 | 5_4:+15609445 | None:intergenic |
| GTTGAGAAGAAAGTAGGCGA+CGG | 0.659806 | 5_4:+15609747 | None:intergenic |
| GAGATTGTGAGGACTTGGAG+AGG | 0.660593 | 5_4:+15609694 | None:intergenic |
| AGGGAAATCAGTGGTGTGTG+AGG | 0.661214 | 5_4:-15608668 | Msa0840050:CDS |
| CAGTTGAGAGAGTTACCGGA+AGG | 0.670466 | 5_4:-15609381 | Msa0840050:CDS |
| GGTAGACAAAGGAAGCGATG+AGG | 0.674346 | 5_4:+15609650 | None:intergenic |
| CGGAGTTGAATCTTACAACG+GGG | 0.676491 | 5_4:+15609107 | None:intergenic |
| GAAAGTGCTGAAGACTAGTG+TGG | 0.677484 | 5_4:-15608620 | Msa0840050:CDS |
| TGAAGGGAGAGGGAAATCAG+TGG | 0.677523 | 5_4:-15608677 | Msa0840050:CDS |
| TTGTTCGGACAAGAAAGCTG+CGG | 0.678327 | 5_4:-15608713 | Msa0840050:CDS |
| TCCTAATCATGGCTGCACGT+CGG | 0.685111 | 5_4:+15609410 | None:intergenic |
| TATGTCCATGGAAGACGAGG+AGG | 0.690419 | 5_4:-15609497 | Msa0840050:CDS |
| TCCGTCGCGGACCACAACGG+CGG | 0.690785 | 5_4:+15609141 | None:intergenic |
| GTATTCAGGGAATATGAGTG+AGG | 0.692268 | 5_4:+15610049 | None:intergenic |
| GCTCGACGGGAATGAGTACA+CGG | 0.696837 | 5_4:-15609245 | Msa0840050:CDS |
| TGAACTCGTGAACAACGAGA+GGG | 0.718037 | 5_4:+15610146 | None:intergenic |
| GGGCTCTGGTCATTCCGTCG+CGG | 0.718599 | 5_4:+15609128 | None:intergenic |
| GGAGTTGAATCTTACAACGG+GGG | 0.724389 | 5_4:+15609108 | None:intergenic |
| GTTCAACGGGTGATGCAATG+GGG | 0.750923 | 5_4:-15608828 | Msa0840050:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAAAAGAAAGAAACAA+AGG | + | chr5_4:15608162-15608181 | None:intergenic | 15.0% |
| !! | AAAATAAAAGAAAGAAACAA+AGG | + | chr5_4:15608162-15608181 | None:intergenic | 15.0% |
| !!! | TTAACAAATGTTGTTTTCTT+TGG | - | chr5_4:15608314-15608333 | Msa0840050:CDS | 20.0% |
| !!! | ATTTGTTGAAATTACTCATT+TGG | - | chr5_4:15609135-15609154 | Msa0840050:CDS | 20.0% |
| !!! | TTAACAAATGTTGTTTTCTT+TGG | - | chr5_4:15608314-15608333 | Msa0840050:CDS | 20.0% |
| !!! | ATTTGTTGAAATTACTCATT+TGG | - | chr5_4:15609135-15609154 | Msa0840050:CDS | 20.0% |
| !! | ATTTATAGACAGAGTATTCA+GGG | + | chr5_4:15608062-15608081 | None:intergenic | 25.0% |
| !! | TATTTATAGACAGAGTATTC+AGG | + | chr5_4:15608063-15608082 | None:intergenic | 25.0% |
| !!! | ACTTTTTGGTCAGATATTTT+CGG | + | chr5_4:15608578-15608597 | None:intergenic | 25.0% |
| ! | TTTGACTACGATTCTATATT+AGG | - | chr5_4:15608764-15608783 | Msa0840050:CDS | 25.0% |
| ! | TGTAAAGCTATTTATGTTTC+CGG | - | chr5_4:15608923-15608942 | Msa0840050:intron | 25.0% |
| ! | TTTCTCTGCGATATTTATTT+AGG | - | chr5_4:15609171-15609190 | Msa0840050:CDS | 25.0% |
| !! | CATATCTGGAAATTTTTGTT+CGG | - | chr5_4:15609367-15609386 | Msa0840050:CDS | 25.0% |
| !!! | TATTGTTTCTGCAATTTACT+TGG | - | chr5_4:15609586-15609605 | Msa0840050:CDS | 25.0% |
| !!! | CTAAATTTACTTGGTGTTAA+AGG | - | chr5_4:15609770-15609789 | Msa0840050:CDS | 25.0% |
| !! | ATTTATAGACAGAGTATTCA+GGG | + | chr5_4:15608062-15608081 | None:intergenic | 25.0% |
| !! | TATTTATAGACAGAGTATTC+AGG | + | chr5_4:15608063-15608082 | None:intergenic | 25.0% |
| !!! | ACTTTTTGGTCAGATATTTT+CGG | + | chr5_4:15608578-15608597 | None:intergenic | 25.0% |
| ! | TTTGACTACGATTCTATATT+AGG | - | chr5_4:15608764-15608783 | Msa0840050:CDS | 25.0% |
| ! | TGTAAAGCTATTTATGTTTC+CGG | - | chr5_4:15608923-15608942 | Msa0840050:intron | 25.0% |
| ! | TTTCTCTGCGATATTTATTT+AGG | - | chr5_4:15609171-15609190 | Msa0840050:CDS | 25.0% |
| !! | CATATCTGGAAATTTTTGTT+CGG | - | chr5_4:15609367-15609386 | Msa0840050:CDS | 25.0% |
| !!! | TATTGTTTCTGCAATTTACT+TGG | - | chr5_4:15609586-15609605 | Msa0840050:CDS | 25.0% |
| !!! | CTAAATTTACTTGGTGTTAA+AGG | - | chr5_4:15609770-15609789 | Msa0840050:CDS | 25.0% |
| ! | ACAAAGTATTAAAGCGACTA+TGG | - | chr5_4:15609214-15609233 | Msa0840050:CDS | 30.0% |
| TATGCCAATAACATCCATAT+CGG | + | chr5_4:15609351-15609370 | None:intergenic | 30.0% | |
| AACATGCTAAAAAACCTTAC+TGG | - | chr5_4:15609515-15609534 | Msa0840050:CDS | 30.0% | |
| TCAGCTTGTCTAAATTTACT+TGG | - | chr5_4:15609761-15609780 | Msa0840050:CDS | 30.0% | |
| TAGATCTGTTGTATTTCATG+TGG | + | chr5_4:15609915-15609934 | None:intergenic | 30.0% | |
| GATTATTTATCTCACACTTG+TGG | + | chr5_4:15609989-15610008 | None:intergenic | 30.0% | |
| !! | AAGAGTGTTAGAGAAAAAGA+GGG | + | chr5_4:15610139-15610158 | None:intergenic | 30.0% |
| ! | ACAAAGTATTAAAGCGACTA+TGG | - | chr5_4:15609214-15609233 | Msa0840050:CDS | 30.0% |
| TATGCCAATAACATCCATAT+CGG | + | chr5_4:15609351-15609370 | None:intergenic | 30.0% | |
| AACATGCTAAAAAACCTTAC+TGG | - | chr5_4:15609515-15609534 | Msa0840050:CDS | 30.0% | |
| TCAGCTTGTCTAAATTTACT+TGG | - | chr5_4:15609761-15609780 | Msa0840050:CDS | 30.0% | |
| TAGATCTGTTGTATTTCATG+TGG | + | chr5_4:15609915-15609934 | None:intergenic | 30.0% | |
| GATTATTTATCTCACACTTG+TGG | + | chr5_4:15609989-15610008 | None:intergenic | 30.0% | |
| !! | AAGAGTGTTAGAGAAAAAGA+GGG | + | chr5_4:15610139-15610158 | None:intergenic | 30.0% |
| GGAATATGAGTGAGGAATAA+GGG | + | chr5_4:15608041-15608060 | None:intergenic | 35.0% | |
| TCTCTCTGGTTATTATGTGA+AGG | + | chr5_4:15608205-15608224 | None:intergenic | 35.0% | |
| GAAAGTGATAAGGTAGACAA+AGG | + | chr5_4:15608459-15608478 | None:intergenic | 35.0% | |
| GTCTACCTTATCACTTTCTT+CGG | - | chr5_4:15608461-15608480 | Msa0840050:CDS | 35.0% | |
| TTCATCGTAATGAAGGATGA+AGG | + | chr5_4:15608492-15608511 | None:intergenic | 35.0% | |
| CTTCTTGTTCATCGTAATGA+AGG | + | chr5_4:15608499-15608518 | None:intergenic | 35.0% | |
| ! | TTTTGGTCAGATATTTTCGG+TGG | + | chr5_4:15608575-15608594 | None:intergenic | 35.0% |
| TGACCAAAAAGTTATGTCCA+TGG | - | chr5_4:15608586-15608605 | Msa0840050:CDS | 35.0% | |
| ! | CTTCCATGGACATAACTTTT+TGG | + | chr5_4:15608592-15608611 | None:intergenic | 35.0% |
| ! | AATAGCTTTACAGCCTCTAT+TGG | + | chr5_4:15608915-15608934 | None:intergenic | 35.0% |
| AAAGCTATTTATGTTTCCGG+TGG | - | chr5_4:15608926-15608945 | Msa0840050:intron | 35.0% | |
| ! | TTTCAACTGAGAAGCTCTTT+TGG | + | chr5_4:15609014-15609033 | None:intergenic | 35.0% |
| ! | GAGAGGGAATCAAAATTTTG+AGG | + | chr5_4:15609052-15609071 | None:intergenic | 35.0% |
| CACTAGATTCACTTGTTCAA+CGG | - | chr5_4:15609253-15609272 | Msa0840050:CDS | 35.0% | |
| ACTAGATTCACTTGTTCAAC+GGG | - | chr5_4:15609254-15609273 | Msa0840050:CDS | 35.0% | |
| AACATCCATATCGGGAAAAT+CGG | + | chr5_4:15609342-15609361 | None:intergenic | 35.0% | |
| TTTCCCGATATGGATGTTAT+TGG | - | chr5_4:15609344-15609363 | Msa0840050:CDS | 35.0% | |
| ATGCCAATAACATCCATATC+GGG | + | chr5_4:15609350-15609369 | None:intergenic | 35.0% | |
| ATGGATGTTATTGGCATATC+TGG | - | chr5_4:15609353-15609372 | Msa0840050:CDS | 35.0% | |
| !! | CAAGAGTGTTAGAGAAAAAG+AGG | + | chr5_4:15610140-15610159 | None:intergenic | 35.0% |
| GGAATATGAGTGAGGAATAA+GGG | + | chr5_4:15608041-15608060 | None:intergenic | 35.0% | |
| TCTCTCTGGTTATTATGTGA+AGG | + | chr5_4:15608205-15608224 | None:intergenic | 35.0% | |
| GAAAGTGATAAGGTAGACAA+AGG | + | chr5_4:15608459-15608478 | None:intergenic | 35.0% | |
| GTCTACCTTATCACTTTCTT+CGG | - | chr5_4:15608461-15608480 | Msa0840050:CDS | 35.0% | |
| TTCATCGTAATGAAGGATGA+AGG | + | chr5_4:15608492-15608511 | None:intergenic | 35.0% | |
| CTTCTTGTTCATCGTAATGA+AGG | + | chr5_4:15608499-15608518 | None:intergenic | 35.0% | |
| ! | TTTTGGTCAGATATTTTCGG+TGG | + | chr5_4:15608575-15608594 | None:intergenic | 35.0% |
| TGACCAAAAAGTTATGTCCA+TGG | - | chr5_4:15608586-15608605 | Msa0840050:CDS | 35.0% | |
| ! | CTTCCATGGACATAACTTTT+TGG | + | chr5_4:15608592-15608611 | None:intergenic | 35.0% |
| ! | AATAGCTTTACAGCCTCTAT+TGG | + | chr5_4:15608915-15608934 | None:intergenic | 35.0% |
| AAAGCTATTTATGTTTCCGG+TGG | - | chr5_4:15608926-15608945 | Msa0840050:intron | 35.0% | |
| ! | TTTCAACTGAGAAGCTCTTT+TGG | + | chr5_4:15609014-15609033 | None:intergenic | 35.0% |
| ! | GAGAGGGAATCAAAATTTTG+AGG | + | chr5_4:15609052-15609071 | None:intergenic | 35.0% |
| CACTAGATTCACTTGTTCAA+CGG | - | chr5_4:15609253-15609272 | Msa0840050:CDS | 35.0% | |
| ACTAGATTCACTTGTTCAAC+GGG | - | chr5_4:15609254-15609273 | Msa0840050:CDS | 35.0% | |
| AACATCCATATCGGGAAAAT+CGG | + | chr5_4:15609342-15609361 | None:intergenic | 35.0% | |
| TTTCCCGATATGGATGTTAT+TGG | - | chr5_4:15609344-15609363 | Msa0840050:CDS | 35.0% | |
| ATGCCAATAACATCCATATC+GGG | + | chr5_4:15609350-15609369 | None:intergenic | 35.0% | |
| ATGGATGTTATTGGCATATC+TGG | - | chr5_4:15609353-15609372 | Msa0840050:CDS | 35.0% | |
| !! | CAAGAGTGTTAGAGAAAAAG+AGG | + | chr5_4:15610140-15610159 | None:intergenic | 35.0% |
| GGGAATATGAGTGAGGAATA+AGG | + | chr5_4:15608042-15608061 | None:intergenic | 40.0% | |
| GTATTCAGGGAATATGAGTG+AGG | + | chr5_4:15608049-15608068 | None:intergenic | 40.0% | |
| ! | TTCAGGGGATGATTGATGAT+TGG | + | chr5_4:15608127-15608146 | None:intergenic | 40.0% |
| AGAAACAAAGGAGTTCAGCT+CGG | + | chr5_4:15608150-15608169 | None:intergenic | 40.0% | |
| GAAGAAGAACCAAAAGAAGC+AGG | - | chr5_4:15608268-15608287 | Msa0840050:exon | 40.0% | |
| CAATGCCGAAGAAAGTGATA+AGG | + | chr5_4:15608469-15608488 | None:intergenic | 40.0% | |
| ATTGCTGCAAAAACCACTCA+AGG | - | chr5_4:15608527-15608546 | Msa0840050:CDS | 40.0% | |
| TTGGATTCAAGCGAGTAAGA+CGG | + | chr5_4:15608653-15608672 | None:intergenic | 40.0% | |
| AACTGCTTGGTTCCTAATCA+TGG | + | chr5_4:15608699-15608718 | None:intergenic | 40.0% | |
| TAAACCTTCAAGTGACCTTC+CGG | + | chr5_4:15608732-15608751 | None:intergenic | 40.0% | |
| TCGTAGTCAAAACCTTCCAT+CGG | + | chr5_4:15608755-15608774 | None:intergenic | 40.0% | |
| GGAATCTGAACAAACCCTAT+CGG | + | chr5_4:15608806-15608825 | None:intergenic | 40.0% | |
| ! | GATAGGGTTTGTTCAGATTC+CGG | - | chr5_4:15608805-15608824 | Msa0840050:CDS | 40.0% |
| ! | CTTGTTGAAAGTGTGAGAGA+GGG | + | chr5_4:15609068-15609087 | None:intergenic | 40.0% |
| ! | ACTTGTTGAAAGTGTGAGAG+AGG | + | chr5_4:15609069-15609088 | None:intergenic | 40.0% |
| AGTATTAAAGCGACTATGGC+AGG | - | chr5_4:15609218-15609237 | Msa0840050:CDS | 40.0% | |
| !! | TCAAACCGATTTTCCCGATA+TGG | - | chr5_4:15609334-15609353 | Msa0840050:CDS | 40.0% |
| TGAATTGGATTGAAGGGAGA+GGG | - | chr5_4:15609408-15609427 | Msa0840050:CDS | 40.0% | |
| TGAGGCTGTAATAAAGGAAG+AGG | - | chr5_4:15609445-15609464 | Msa0840050:CDS | 40.0% | |
| TCTGCAATTTACTTGGCTAC+AGG | - | chr5_4:15609593-15609612 | Msa0840050:CDS | 40.0% | |
| GAACTTTCAACATTCTGAGC+AGG | + | chr5_4:15609626-15609645 | None:intergenic | 40.0% | |
| TTCTCACTGTATGACCATGA+TGG | - | chr5_4:15609643-15609662 | Msa0840050:CDS | 40.0% | |
| GCATAGTGACTGAGATATGA+AGG | + | chr5_4:15609691-15609710 | None:intergenic | 40.0% | |
| GGGAATATGAGTGAGGAATA+AGG | + | chr5_4:15608042-15608061 | None:intergenic | 40.0% | |
| GTATTCAGGGAATATGAGTG+AGG | + | chr5_4:15608049-15608068 | None:intergenic | 40.0% | |
| ! | TTCAGGGGATGATTGATGAT+TGG | + | chr5_4:15608127-15608146 | None:intergenic | 40.0% |
| AGAAACAAAGGAGTTCAGCT+CGG | + | chr5_4:15608150-15608169 | None:intergenic | 40.0% | |
| GAAGAAGAACCAAAAGAAGC+AGG | - | chr5_4:15608268-15608287 | Msa0840050:exon | 40.0% | |
| CAATGCCGAAGAAAGTGATA+AGG | + | chr5_4:15608469-15608488 | None:intergenic | 40.0% | |
| ATTGCTGCAAAAACCACTCA+AGG | - | chr5_4:15608527-15608546 | Msa0840050:CDS | 40.0% | |
| TTGGATTCAAGCGAGTAAGA+CGG | + | chr5_4:15608653-15608672 | None:intergenic | 40.0% | |
| AACTGCTTGGTTCCTAATCA+TGG | + | chr5_4:15608699-15608718 | None:intergenic | 40.0% | |
| TAAACCTTCAAGTGACCTTC+CGG | + | chr5_4:15608732-15608751 | None:intergenic | 40.0% | |
| TCGTAGTCAAAACCTTCCAT+CGG | + | chr5_4:15608755-15608774 | None:intergenic | 40.0% | |
| GGAATCTGAACAAACCCTAT+CGG | + | chr5_4:15608806-15608825 | None:intergenic | 40.0% | |
| ! | GATAGGGTTTGTTCAGATTC+CGG | - | chr5_4:15608805-15608824 | Msa0840050:CDS | 40.0% |
| ! | CTTGTTGAAAGTGTGAGAGA+GGG | + | chr5_4:15609068-15609087 | None:intergenic | 40.0% |
| ! | ACTTGTTGAAAGTGTGAGAG+AGG | + | chr5_4:15609069-15609088 | None:intergenic | 40.0% |
| AGTATTAAAGCGACTATGGC+AGG | - | chr5_4:15609218-15609237 | Msa0840050:CDS | 40.0% | |
| !! | TCAAACCGATTTTCCCGATA+TGG | - | chr5_4:15609334-15609353 | Msa0840050:CDS | 40.0% |
| TGAATTGGATTGAAGGGAGA+GGG | - | chr5_4:15609408-15609427 | Msa0840050:CDS | 40.0% | |
| TGAGGCTGTAATAAAGGAAG+AGG | - | chr5_4:15609445-15609464 | Msa0840050:CDS | 40.0% | |
| TCTGCAATTTACTTGGCTAC+AGG | - | chr5_4:15609593-15609612 | Msa0840050:CDS | 40.0% | |
| GAACTTTCAACATTCTGAGC+AGG | + | chr5_4:15609626-15609645 | None:intergenic | 40.0% | |
| TTCTCACTGTATGACCATGA+TGG | - | chr5_4:15609643-15609662 | Msa0840050:CDS | 40.0% | |
| GCATAGTGACTGAGATATGA+AGG | + | chr5_4:15609691-15609710 | None:intergenic | 40.0% | |
| TGAACTCGTGAACAACGAGA+GGG | + | chr5_4:15607952-15607971 | None:intergenic | 45.0% | |
| ATGAACTCGTGAACAACGAG+AGG | + | chr5_4:15607953-15607972 | None:intergenic | 45.0% | |
| CATTTCTCTCTCTCTCTCTC+TGG | + | chr5_4:15608219-15608238 | None:intergenic | 45.0% | |
| CAGAGAGAGAGAGAGAGAAA+TGG | - | chr5_4:15608217-15608236 | Msa0840050:three_prime_UTR | 45.0% | |
| GAAGAACCAAAAGAAGCAGG+AGG | - | chr5_4:15608271-15608290 | Msa0840050:exon | 45.0% | |
| ! | GTGAATCCTCCTGCTTCTTT+TGG | + | chr5_4:15608280-15608299 | None:intergenic | 45.0% |
| GTTGAGAAGAAAGTAGGCGA+CGG | + | chr5_4:15608351-15608370 | None:intergenic | 45.0% | |
| TCGCCTACTTTCTTCTCAAC+AGG | - | chr5_4:15608351-15608370 | Msa0840050:CDS | 45.0% | |
| CCACCTGTTGAGAAGAAAGT+AGG | + | chr5_4:15608357-15608376 | None:intergenic | 45.0% | |
| CCTACTTTCTTCTCAACAGG+TGG | - | chr5_4:15608354-15608373 | Msa0840050:CDS | 45.0% | |
| TCTCAGAGATTGTGAGGACT+TGG | + | chr5_4:15608409-15608428 | None:intergenic | 45.0% | |
| CGAGAATCTCAGAGATTGTG+AGG | + | chr5_4:15608415-15608434 | None:intergenic | 45.0% | |
| GTAGACAAAGGAAGCGATGA+GGG | + | chr5_4:15608447-15608466 | None:intergenic | 45.0% | |
| ! | TGGTCAGATATTTTCGGTGG+TGG | + | chr5_4:15608572-15608591 | None:intergenic | 45.0% |
| AGTTATGTCCATGGAAGACG+AGG | - | chr5_4:15608595-15608614 | Msa0840050:CDS | 45.0% | |
| TACTCGCTTGAATCCAAGCT+CGG | - | chr5_4:15608656-15608675 | Msa0840050:CDS | 45.0% | |
| CAAGCAGTTGAGAGAGTTAC+CGG | - | chr5_4:15608710-15608729 | Msa0840050:CDS | 45.0% | |
| GTCACTTGAAGGTTTACCGA+TGG | - | chr5_4:15608736-15608755 | Msa0840050:CDS | 45.0% | |
| CTTGAAGGTTTACCGATGGA+AGG | - | chr5_4:15608740-15608759 | Msa0840050:CDS | 45.0% | |
| AGTGTTGTGAGATGCCGATA+GGG | - | chr5_4:15608789-15608808 | Msa0840050:CDS | 45.0% | |
| GCTTGCAACCAAACAACCTT+CGG | + | chr5_4:15608891-15608910 | None:intergenic | 45.0% | |
| TTGGTTGCAAGCACCAATAG+AGG | - | chr5_4:15608899-15608918 | Msa0840050:CDS | 45.0% | |
| GGAGTTGAATCTTACAACGG+GGG | + | chr5_4:15608990-15609009 | None:intergenic | 45.0% | |
| CGGAGTTGAATCTTACAACG+GGG | + | chr5_4:15608991-15609010 | None:intergenic | 45.0% | |
| GCGGAGTTGAATCTTACAAC+GGG | + | chr5_4:15608992-15609011 | None:intergenic | 45.0% | |
| GGCGGAGTTGAATCTTACAA+CGG | + | chr5_4:15608993-15609012 | None:intergenic | 45.0% | |
| ! | CAACTGAGAAGCTCTTTTGG+CGG | + | chr5_4:15609011-15609030 | None:intergenic | 45.0% |
| TTGTTCAACGGGTGATGCAA+TGG | - | chr5_4:15609265-15609284 | Msa0840050:CDS | 45.0% | |
| TGTTCAACGGGTGATGCAAT+GGG | - | chr5_4:15609266-15609285 | Msa0840050:CDS | 45.0% | |
| TGATGCAATGGGGATGAACA+TGG | - | chr5_4:15609277-15609296 | Msa0840050:CDS | 45.0% | |
| ! | GGGATGAACATGGTATCGAA+AGG | - | chr5_4:15609287-15609306 | Msa0840050:CDS | 45.0% |
| TTGTTCGGACAAGAAAGCTG+CGG | - | chr5_4:15609382-15609401 | Msa0840050:CDS | 45.0% | |
| CGGCAGTGAATTGGATTGAA+GGG | - | chr5_4:15609402-15609421 | Msa0840050:CDS | 45.0% | |
| GTGAATTGGATTGAAGGGAG+AGG | - | chr5_4:15609407-15609426 | Msa0840050:CDS | 45.0% | |
| GGTGTGTGAGGCTGTAATAA+AGG | - | chr5_4:15609439-15609458 | Msa0840050:CDS | 45.0% | |
| GGCTGTAATAAAGGAAGAGG+TGG | - | chr5_4:15609448-15609467 | Msa0840050:CDS | 45.0% | |
| !! | GAAAGTGCTGAAGACTAGTG+TGG | - | chr5_4:15609475-15609494 | Msa0840050:CDS | 45.0% |
| GAAGACTAGTGTGGAGTCTT+TGG | - | chr5_4:15609484-15609503 | Msa0840050:CDS | 45.0% | |
| !! | AAACCTTACTGGTTCAGCCA+TGG | - | chr5_4:15609526-15609545 | Msa0840050:CDS | 45.0% |
| ! | ATGATGGAAGCCGTGAATGA+CGG | - | chr5_4:15609659-15609678 | Msa0840050:CDS | 45.0% |
| AAGGTCCTTTCCGTCATTCA+CGG | + | chr5_4:15609672-15609691 | None:intergenic | 45.0% | |
| AGTCACTATGCCTTCCATTG+AGG | - | chr5_4:15609700-15609719 | Msa0840050:CDS | 45.0% | |
| ACTATGCCTTCCATTGAGGT+GGG | - | chr5_4:15609704-15609723 | Msa0840050:CDS | 45.0% | |
| ! | GTGGCTTTTAACAAGTTGCC+CGG | + | chr5_4:15609896-15609915 | None:intergenic | 45.0% |
| ACCAAAGTTGCTTCATGAGC+TGG | - | chr5_4:15609946-15609965 | Msa0840050:five_prime_UTR | 45.0% | |
| TCCAGCTCATGAAGCAACTT+TGG | + | chr5_4:15609950-15609969 | None:intergenic | 45.0% | |
| TGAACTCGTGAACAACGAGA+GGG | + | chr5_4:15607952-15607971 | None:intergenic | 45.0% | |
| ATGAACTCGTGAACAACGAG+AGG | + | chr5_4:15607953-15607972 | None:intergenic | 45.0% | |
| CATTTCTCTCTCTCTCTCTC+TGG | + | chr5_4:15608219-15608238 | None:intergenic | 45.0% | |
| CAGAGAGAGAGAGAGAGAAA+TGG | - | chr5_4:15608217-15608236 | Msa0840050:three_prime_UTR | 45.0% | |
| GAAGAACCAAAAGAAGCAGG+AGG | - | chr5_4:15608271-15608290 | Msa0840050:exon | 45.0% | |
| ! | GTGAATCCTCCTGCTTCTTT+TGG | + | chr5_4:15608280-15608299 | None:intergenic | 45.0% |
| GTTGAGAAGAAAGTAGGCGA+CGG | + | chr5_4:15608351-15608370 | None:intergenic | 45.0% | |
| TCGCCTACTTTCTTCTCAAC+AGG | - | chr5_4:15608351-15608370 | Msa0840050:CDS | 45.0% | |
| CCACCTGTTGAGAAGAAAGT+AGG | + | chr5_4:15608357-15608376 | None:intergenic | 45.0% | |
| CCTACTTTCTTCTCAACAGG+TGG | - | chr5_4:15608354-15608373 | Msa0840050:CDS | 45.0% | |
| TCTCAGAGATTGTGAGGACT+TGG | + | chr5_4:15608409-15608428 | None:intergenic | 45.0% | |
| CGAGAATCTCAGAGATTGTG+AGG | + | chr5_4:15608415-15608434 | None:intergenic | 45.0% | |
| GTAGACAAAGGAAGCGATGA+GGG | + | chr5_4:15608447-15608466 | None:intergenic | 45.0% | |
| ! | TGGTCAGATATTTTCGGTGG+TGG | + | chr5_4:15608572-15608591 | None:intergenic | 45.0% |
| AGTTATGTCCATGGAAGACG+AGG | - | chr5_4:15608595-15608614 | Msa0840050:CDS | 45.0% | |
| TACTCGCTTGAATCCAAGCT+CGG | - | chr5_4:15608656-15608675 | Msa0840050:CDS | 45.0% | |
| CAAGCAGTTGAGAGAGTTAC+CGG | - | chr5_4:15608710-15608729 | Msa0840050:CDS | 45.0% | |
| GTCACTTGAAGGTTTACCGA+TGG | - | chr5_4:15608736-15608755 | Msa0840050:CDS | 45.0% | |
| CTTGAAGGTTTACCGATGGA+AGG | - | chr5_4:15608740-15608759 | Msa0840050:CDS | 45.0% | |
| AGTGTTGTGAGATGCCGATA+GGG | - | chr5_4:15608789-15608808 | Msa0840050:CDS | 45.0% | |
| GCTTGCAACCAAACAACCTT+CGG | + | chr5_4:15608891-15608910 | None:intergenic | 45.0% | |
| TTGGTTGCAAGCACCAATAG+AGG | - | chr5_4:15608899-15608918 | Msa0840050:CDS | 45.0% | |
| GGAGTTGAATCTTACAACGG+GGG | + | chr5_4:15608990-15609009 | None:intergenic | 45.0% | |
| CGGAGTTGAATCTTACAACG+GGG | + | chr5_4:15608991-15609010 | None:intergenic | 45.0% | |
| GCGGAGTTGAATCTTACAAC+GGG | + | chr5_4:15608992-15609011 | None:intergenic | 45.0% | |
| GGCGGAGTTGAATCTTACAA+CGG | + | chr5_4:15608993-15609012 | None:intergenic | 45.0% | |
| ! | CAACTGAGAAGCTCTTTTGG+CGG | + | chr5_4:15609011-15609030 | None:intergenic | 45.0% |
| TTGTTCAACGGGTGATGCAA+TGG | - | chr5_4:15609265-15609284 | Msa0840050:CDS | 45.0% | |
| TGTTCAACGGGTGATGCAAT+GGG | - | chr5_4:15609266-15609285 | Msa0840050:CDS | 45.0% | |
| TGATGCAATGGGGATGAACA+TGG | - | chr5_4:15609277-15609296 | Msa0840050:CDS | 45.0% | |
| ! | GGGATGAACATGGTATCGAA+AGG | - | chr5_4:15609287-15609306 | Msa0840050:CDS | 45.0% |
| TTGTTCGGACAAGAAAGCTG+CGG | - | chr5_4:15609382-15609401 | Msa0840050:CDS | 45.0% | |
| CGGCAGTGAATTGGATTGAA+GGG | - | chr5_4:15609402-15609421 | Msa0840050:CDS | 45.0% | |
| GTGAATTGGATTGAAGGGAG+AGG | - | chr5_4:15609407-15609426 | Msa0840050:CDS | 45.0% | |
| GGTGTGTGAGGCTGTAATAA+AGG | - | chr5_4:15609439-15609458 | Msa0840050:CDS | 45.0% | |
| GGCTGTAATAAAGGAAGAGG+TGG | - | chr5_4:15609448-15609467 | Msa0840050:CDS | 45.0% | |
| !! | GAAAGTGCTGAAGACTAGTG+TGG | - | chr5_4:15609475-15609494 | Msa0840050:CDS | 45.0% |
| GAAGACTAGTGTGGAGTCTT+TGG | - | chr5_4:15609484-15609503 | Msa0840050:CDS | 45.0% | |
| !! | AAACCTTACTGGTTCAGCCA+TGG | - | chr5_4:15609526-15609545 | Msa0840050:CDS | 45.0% |
| ! | ATGATGGAAGCCGTGAATGA+CGG | - | chr5_4:15609659-15609678 | Msa0840050:CDS | 45.0% |
| AAGGTCCTTTCCGTCATTCA+CGG | + | chr5_4:15609672-15609691 | None:intergenic | 45.0% | |
| AGTCACTATGCCTTCCATTG+AGG | - | chr5_4:15609700-15609719 | Msa0840050:CDS | 45.0% | |
| ACTATGCCTTCCATTGAGGT+GGG | - | chr5_4:15609704-15609723 | Msa0840050:CDS | 45.0% | |
| ! | GTGGCTTTTAACAAGTTGCC+CGG | + | chr5_4:15609896-15609915 | None:intergenic | 45.0% |
| ACCAAAGTTGCTTCATGAGC+TGG | - | chr5_4:15609946-15609965 | Msa0840050:five_prime_UTR | 45.0% | |
| TCCAGCTCATGAAGCAACTT+TGG | + | chr5_4:15609950-15609969 | None:intergenic | 45.0% | |
| !!! | AAAATTTAATGTTATTTTTT+TGG | + | chr5_4:15608011-15608030 | None:intergenic | 5.0% |
| !!! | AAAATTTAATGTTATTTTTT+TGG | + | chr5_4:15608011-15608030 | None:intergenic | 5.0% |
| AAGGAGTTCAGCTCGGTTCA+GGG | + | chr5_4:15608143-15608162 | None:intergenic | 50.0% | |
| AAAGGAGTTCAGCTCGGTTC+AGG | + | chr5_4:15608144-15608163 | None:intergenic | 50.0% | |
| ! | CTTGGAGAGGTGTAGAGGTT+CGG | + | chr5_4:15608391-15608410 | None:intergenic | 50.0% |
| GAGATTGTGAGGACTTGGAG+AGG | + | chr5_4:15608404-15608423 | None:intergenic | 50.0% | |
| GGTAGACAAAGGAAGCGATG+AGG | + | chr5_4:15608448-15608467 | None:intergenic | 50.0% | |
| ! | TTCGGTGGTGGTAGCTTCTT+CGG | + | chr5_4:15608560-15608579 | None:intergenic | 50.0% |
| TATGTCCATGGAAGACGAGG+AGG | - | chr5_4:15608598-15608617 | Msa0840050:CDS | 50.0% | |
| ATGGAAGACGAGGAGGTTGT+CGG | - | chr5_4:15608605-15608624 | Msa0840050:CDS | 50.0% | |
| TCCTAATCATGGCTGCACGT+CGG | + | chr5_4:15608688-15608707 | None:intergenic | 50.0% | |
| CGGTAACTCTCTCAACTGCT+TGG | + | chr5_4:15608712-15608731 | None:intergenic | 50.0% | |
| CAGTTGAGAGAGTTACCGGA+AGG | - | chr5_4:15608714-15608733 | Msa0840050:CDS | 50.0% | |
| GTTACCGGAAGGTCACTTGA+AGG | - | chr5_4:15608725-15608744 | Msa0840050:CDS | 50.0% | |
| CAGTGTTGTGAGATGCCGAT+AGG | - | chr5_4:15608788-15608807 | Msa0840050:CDS | 50.0% | |
| ! | GGGTTTGTTCAGATTCCGGT+AGG | - | chr5_4:15608809-15608828 | Msa0840050:CDS | 50.0% |
| TCATTCCCGTCGAGCAACAA+AGG | + | chr5_4:15608845-15608864 | None:intergenic | 50.0% | |
| TGCAACCAAACAACCTTCGG+TGG | + | chr5_4:15608888-15608907 | None:intergenic | 50.0% | |
| GTTCAACGGGTGATGCAATG+GGG | - | chr5_4:15609267-15609286 | Msa0840050:CDS | 50.0% | |
| AGAAAGCTGCGGCAGTGAAT+TGG | - | chr5_4:15609393-15609412 | Msa0840050:CDS | 50.0% | |
| GCGGCAGTGAATTGGATTGA+AGG | - | chr5_4:15609401-15609420 | Msa0840050:CDS | 50.0% | |
| TGAAGGGAGAGGGAAATCAG+TGG | - | chr5_4:15609418-15609437 | Msa0840050:CDS | 50.0% | |
| AGGGAAATCAGTGGTGTGTG+AGG | - | chr5_4:15609427-15609446 | Msa0840050:CDS | 50.0% | |
| GTCATTCACGGCTTCCATCA+TGG | + | chr5_4:15609660-15609679 | None:intergenic | 50.0% | |
| CACTATGCCTTCCATTGAGG+TGG | - | chr5_4:15609703-15609722 | Msa0840050:CDS | 50.0% | |
| GGAGCTAGTAAAGAGACTCC+AGG | - | chr5_4:15609791-15609810 | Msa0840050:CDS | 50.0% | |
| AGACTCCAGGAGCAAATTCC+AGG | - | chr5_4:15609804-15609823 | Msa0840050:CDS | 50.0% | |
| ! | ACTTGCCTGGAATTTGCTCC+TGG | + | chr5_4:15609812-15609831 | None:intergenic | 50.0% |
| AGGAGCAAATTCCAGGCAAG+TGG | - | chr5_4:15609811-15609830 | Msa0840050:CDS | 50.0% | |
| CTCATGTCTGCAATTGCAGC+CGG | - | chr5_4:15609874-15609893 | Msa0840050:exon | 50.0% | |
| TCATGTCTGCAATTGCAGCC+GGG | - | chr5_4:15609875-15609894 | Msa0840050:exon | 50.0% | |
| AAGGAGTTCAGCTCGGTTCA+GGG | + | chr5_4:15608143-15608162 | None:intergenic | 50.0% | |
| AAAGGAGTTCAGCTCGGTTC+AGG | + | chr5_4:15608144-15608163 | None:intergenic | 50.0% | |
| ! | CTTGGAGAGGTGTAGAGGTT+CGG | + | chr5_4:15608391-15608410 | None:intergenic | 50.0% |
| GAGATTGTGAGGACTTGGAG+AGG | + | chr5_4:15608404-15608423 | None:intergenic | 50.0% | |
| GGTAGACAAAGGAAGCGATG+AGG | + | chr5_4:15608448-15608467 | None:intergenic | 50.0% | |
| ! | TTCGGTGGTGGTAGCTTCTT+CGG | + | chr5_4:15608560-15608579 | None:intergenic | 50.0% |
| TATGTCCATGGAAGACGAGG+AGG | - | chr5_4:15608598-15608617 | Msa0840050:CDS | 50.0% | |
| ATGGAAGACGAGGAGGTTGT+CGG | - | chr5_4:15608605-15608624 | Msa0840050:CDS | 50.0% | |
| TCCTAATCATGGCTGCACGT+CGG | + | chr5_4:15608688-15608707 | None:intergenic | 50.0% | |
| CGGTAACTCTCTCAACTGCT+TGG | + | chr5_4:15608712-15608731 | None:intergenic | 50.0% | |
| CAGTTGAGAGAGTTACCGGA+AGG | - | chr5_4:15608714-15608733 | Msa0840050:CDS | 50.0% | |
| GTTACCGGAAGGTCACTTGA+AGG | - | chr5_4:15608725-15608744 | Msa0840050:CDS | 50.0% | |
| CAGTGTTGTGAGATGCCGAT+AGG | - | chr5_4:15608788-15608807 | Msa0840050:CDS | 50.0% | |
| ! | GGGTTTGTTCAGATTCCGGT+AGG | - | chr5_4:15608809-15608828 | Msa0840050:CDS | 50.0% |
| TCATTCCCGTCGAGCAACAA+AGG | + | chr5_4:15608845-15608864 | None:intergenic | 50.0% | |
| TGCAACCAAACAACCTTCGG+TGG | + | chr5_4:15608888-15608907 | None:intergenic | 50.0% | |
| GTTCAACGGGTGATGCAATG+GGG | - | chr5_4:15609267-15609286 | Msa0840050:CDS | 50.0% | |
| AGAAAGCTGCGGCAGTGAAT+TGG | - | chr5_4:15609393-15609412 | Msa0840050:CDS | 50.0% | |
| GCGGCAGTGAATTGGATTGA+AGG | - | chr5_4:15609401-15609420 | Msa0840050:CDS | 50.0% | |
| TGAAGGGAGAGGGAAATCAG+TGG | - | chr5_4:15609418-15609437 | Msa0840050:CDS | 50.0% | |
| AGGGAAATCAGTGGTGTGTG+AGG | - | chr5_4:15609427-15609446 | Msa0840050:CDS | 50.0% | |
| GTCATTCACGGCTTCCATCA+TGG | + | chr5_4:15609660-15609679 | None:intergenic | 50.0% | |
| CACTATGCCTTCCATTGAGG+TGG | - | chr5_4:15609703-15609722 | Msa0840050:CDS | 50.0% | |
| GGAGCTAGTAAAGAGACTCC+AGG | - | chr5_4:15609791-15609810 | Msa0840050:CDS | 50.0% | |
| AGACTCCAGGAGCAAATTCC+AGG | - | chr5_4:15609804-15609823 | Msa0840050:CDS | 50.0% | |
| ! | ACTTGCCTGGAATTTGCTCC+TGG | + | chr5_4:15609812-15609831 | None:intergenic | 50.0% |
| AGGAGCAAATTCCAGGCAAG+TGG | - | chr5_4:15609811-15609830 | Msa0840050:CDS | 50.0% | |
| CTCATGTCTGCAATTGCAGC+CGG | - | chr5_4:15609874-15609893 | Msa0840050:exon | 50.0% | |
| TCATGTCTGCAATTGCAGCC+GGG | - | chr5_4:15609875-15609894 | Msa0840050:exon | 50.0% | |
| AGGAGTTCAGCTCGGTTCAG+GGG | + | chr5_4:15608142-15608161 | None:intergenic | 55.0% | |
| ! | GAGGACTTGGAGAGGTGTAG+AGG | + | chr5_4:15608396-15608415 | None:intergenic | 55.0% |
| CTTCGGCAAGACACCTTGAG+TGG | + | chr5_4:15608543-15608562 | None:intergenic | 55.0% | |
| GACAACCTCCTCGTCTTCCA+TGG | + | chr5_4:15608606-15608625 | None:intergenic | 55.0% | |
| ! | CAGATTCCGGTAGGTGTTGC+CGG | - | chr5_4:15608818-15608837 | Msa0840050:CDS | 55.0% |
| AAAGGACCGGCAACACCTAC+CGG | + | chr5_4:15608827-15608846 | None:intergenic | 55.0% | |
| GCTCGACGGGAATGAGTACA+CGG | - | chr5_4:15608850-15608869 | Msa0840050:CDS | 55.0% | |
| ! | GAATGAGTACACGGTGCCGA+TGG | - | chr5_4:15608859-15608878 | Msa0840050:CDS | 55.0% |
| CAACCTTCGGTGGTTGCCAT+CGG | + | chr5_4:15608878-15608897 | None:intergenic | 55.0% | |
| GGCAACCACCGAAGGTTGTT+TGG | - | chr5_4:15608880-15608899 | Msa0840050:CDS | 55.0% | |
| GAATCTTACAACGGGGGCTC+TGG | + | chr5_4:15608984-15609003 | None:intergenic | 55.0% | |
| CAGCCATGGCTGAACCAGTA+AGG | + | chr5_4:15609532-15609551 | None:intergenic | 55.0% | |
| !! | CTTACTGGTTCAGCCATGGC+TGG | - | chr5_4:15609530-15609549 | Msa0840050:CDS | 55.0% |
| ! | GGAAGCCGTGAATGACGGAA+AGG | - | chr5_4:15609664-15609683 | Msa0840050:CDS | 55.0% |
| ACTGTGCCCACCTCAATGGA+AGG | + | chr5_4:15609713-15609732 | None:intergenic | 55.0% | |
| TCCATTGAGGTGGGCACAGT+AGG | - | chr5_4:15609713-15609732 | Msa0840050:CDS | 55.0% | |
| TCCTACTGTGCCCACCTCAA+TGG | + | chr5_4:15609717-15609736 | None:intergenic | 55.0% | |
| ATTGAGGTGGGCACAGTAGG+AGG | - | chr5_4:15609716-15609735 | Msa0840050:CDS | 55.0% | |
| TTGAGGTGGGCACAGTAGGA+GGG | - | chr5_4:15609717-15609736 | Msa0840050:CDS | 55.0% | |
| ! | CTACGTAGTTGCCACTTGCC+TGG | + | chr5_4:15609825-15609844 | None:intergenic | 55.0% |
| GCAAGTGGCAACTACGTAGC+TGG | - | chr5_4:15609826-15609845 | Msa0840050:CDS | 55.0% | |
| ! | GTAGCTGGTTCAGTCCTTGC+AGG | - | chr5_4:15609841-15609860 | Msa0840050:CDS | 55.0% |
| TGAGTGAGAGCTCTCCTGCA+AGG | + | chr5_4:15609858-15609877 | None:intergenic | 55.0% | |
| AGGAGTTCAGCTCGGTTCAG+GGG | + | chr5_4:15608142-15608161 | None:intergenic | 55.0% | |
| ! | GAGGACTTGGAGAGGTGTAG+AGG | + | chr5_4:15608396-15608415 | None:intergenic | 55.0% |
| CTTCGGCAAGACACCTTGAG+TGG | + | chr5_4:15608543-15608562 | None:intergenic | 55.0% | |
| GACAACCTCCTCGTCTTCCA+TGG | + | chr5_4:15608606-15608625 | None:intergenic | 55.0% | |
| ! | CAGATTCCGGTAGGTGTTGC+CGG | - | chr5_4:15608818-15608837 | Msa0840050:CDS | 55.0% |
| AAAGGACCGGCAACACCTAC+CGG | + | chr5_4:15608827-15608846 | None:intergenic | 55.0% | |
| GCTCGACGGGAATGAGTACA+CGG | - | chr5_4:15608850-15608869 | Msa0840050:CDS | 55.0% | |
| ! | GAATGAGTACACGGTGCCGA+TGG | - | chr5_4:15608859-15608878 | Msa0840050:CDS | 55.0% |
| CAACCTTCGGTGGTTGCCAT+CGG | + | chr5_4:15608878-15608897 | None:intergenic | 55.0% | |
| GGCAACCACCGAAGGTTGTT+TGG | - | chr5_4:15608880-15608899 | Msa0840050:CDS | 55.0% | |
| GAATCTTACAACGGGGGCTC+TGG | + | chr5_4:15608984-15609003 | None:intergenic | 55.0% | |
| CAGCCATGGCTGAACCAGTA+AGG | + | chr5_4:15609532-15609551 | None:intergenic | 55.0% | |
| !! | CTTACTGGTTCAGCCATGGC+TGG | - | chr5_4:15609530-15609549 | Msa0840050:CDS | 55.0% |
| ! | GGAAGCCGTGAATGACGGAA+AGG | - | chr5_4:15609664-15609683 | Msa0840050:CDS | 55.0% |
| ACTGTGCCCACCTCAATGGA+AGG | + | chr5_4:15609713-15609732 | None:intergenic | 55.0% | |
| TCCATTGAGGTGGGCACAGT+AGG | - | chr5_4:15609713-15609732 | Msa0840050:CDS | 55.0% | |
| TCCTACTGTGCCCACCTCAA+TGG | + | chr5_4:15609717-15609736 | None:intergenic | 55.0% | |
| ATTGAGGTGGGCACAGTAGG+AGG | - | chr5_4:15609716-15609735 | Msa0840050:CDS | 55.0% | |
| TTGAGGTGGGCACAGTAGGA+GGG | - | chr5_4:15609717-15609736 | Msa0840050:CDS | 55.0% | |
| ! | CTACGTAGTTGCCACTTGCC+TGG | + | chr5_4:15609825-15609844 | None:intergenic | 55.0% |
| GCAAGTGGCAACTACGTAGC+TGG | - | chr5_4:15609826-15609845 | Msa0840050:CDS | 55.0% | |
| ! | GTAGCTGGTTCAGTCCTTGC+AGG | - | chr5_4:15609841-15609860 | Msa0840050:CDS | 55.0% |
| TGAGTGAGAGCTCTCCTGCA+AGG | + | chr5_4:15609858-15609877 | None:intergenic | 55.0% | |
| AGACGAGGAGGTTGTCGGTG+CGG | - | chr5_4:15608610-15608629 | Msa0840050:CDS | 60.0% | |
| GGTTGTCGGTGCGGTGGTAT+CGG | - | chr5_4:15608619-15608638 | Msa0840050:CDS | 60.0% | |
| GTTGTCGGTGCGGTGGTATC+GGG | - | chr5_4:15608620-15608639 | Msa0840050:CDS | 60.0% | |
| ACGTCGGCAATCTCCGAGCT+TGG | + | chr5_4:15608672-15608691 | None:intergenic | 60.0% | |
| GCCGACGTGCAGCCATGATT+AGG | - | chr5_4:15608684-15608703 | Msa0840050:CDS | 60.0% | |
| GCCGGTCCTTTGTTGCTCGA+CGG | - | chr5_4:15608836-15608855 | Msa0840050:CDS | 60.0% | |
| CCCGTCGAGCAACAAAGGAC+CGG | + | chr5_4:15608840-15608859 | None:intergenic | 60.0% | |
| CCGGTCCTTTGTTGCTCGAC+GGG | - | chr5_4:15608837-15608856 | Msa0840050:CDS | 60.0% | |
| CATTCCGTCGCGGACCACAA+CGG | + | chr5_4:15608960-15608979 | None:intergenic | 60.0% | |
| TCAGCCATGGCTGGTGCTCT+TGG | - | chr5_4:15609539-15609558 | Msa0840050:CDS | 60.0% | |
| TGAGGTGGGCACAGTAGGAG+GGG | - | chr5_4:15609718-15609737 | Msa0840050:CDS | 60.0% | |
| AGACGAGGAGGTTGTCGGTG+CGG | - | chr5_4:15608610-15608629 | Msa0840050:CDS | 60.0% | |
| GGTTGTCGGTGCGGTGGTAT+CGG | - | chr5_4:15608619-15608638 | Msa0840050:CDS | 60.0% | |
| GTTGTCGGTGCGGTGGTATC+GGG | - | chr5_4:15608620-15608639 | Msa0840050:CDS | 60.0% | |
| ACGTCGGCAATCTCCGAGCT+TGG | + | chr5_4:15608672-15608691 | None:intergenic | 60.0% | |
| GCCGACGTGCAGCCATGATT+AGG | - | chr5_4:15608684-15608703 | Msa0840050:CDS | 60.0% | |
| GCCGGTCCTTTGTTGCTCGA+CGG | - | chr5_4:15608836-15608855 | Msa0840050:CDS | 60.0% | |
| CCCGTCGAGCAACAAAGGAC+CGG | + | chr5_4:15608840-15608859 | None:intergenic | 60.0% | |
| CCGGTCCTTTGTTGCTCGAC+GGG | - | chr5_4:15608837-15608856 | Msa0840050:CDS | 60.0% | |
| CATTCCGTCGCGGACCACAA+CGG | + | chr5_4:15608960-15608979 | None:intergenic | 60.0% | |
| TCAGCCATGGCTGGTGCTCT+TGG | - | chr5_4:15609539-15609558 | Msa0840050:CDS | 60.0% | |
| TGAGGTGGGCACAGTAGGAG+GGG | - | chr5_4:15609718-15609737 | Msa0840050:CDS | 60.0% | |
| ! | GTGCCGATGGCAACCACCGA+AGG | - | chr5_4:15608872-15608891 | Msa0840050:CDS | 65.0% |
| !! | CACAACGGCGGAAGCACCAC+CGG | + | chr5_4:15608945-15608964 | None:intergenic | 65.0% |
| ! | GGGCTCTGGTCATTCCGTCG+CGG | + | chr5_4:15608970-15608989 | None:intergenic | 65.0% |
| GCCATGGCTGGTGCTCTTGG+CGG | - | chr5_4:15609542-15609561 | Msa0840050:CDS | 65.0% | |
| GAGGTGGGCACAGTAGGAGG+GGG | - | chr5_4:15609719-15609738 | Msa0840050:CDS | 65.0% | |
| ! | GTGCCGATGGCAACCACCGA+AGG | - | chr5_4:15608872-15608891 | Msa0840050:CDS | 65.0% |
| !! | CACAACGGCGGAAGCACCAC+CGG | + | chr5_4:15608945-15608964 | None:intergenic | 65.0% |
| ! | GGGCTCTGGTCATTCCGTCG+CGG | + | chr5_4:15608970-15608989 | None:intergenic | 65.0% |
| GCCATGGCTGGTGCTCTTGG+CGG | - | chr5_4:15609542-15609561 | Msa0840050:CDS | 65.0% | |
| GAGGTGGGCACAGTAGGAGG+GGG | - | chr5_4:15609719-15609738 | Msa0840050:CDS | 65.0% | |
| CGAGGAGGTTGTCGGTGCGG+TGG | - | chr5_4:15608613-15608632 | Msa0840050:CDS | 70.0% | |
| CGGTGGTGCTTCCGCCGTTG+TGG | - | chr5_4:15608943-15608962 | Msa0840050:intron | 70.0% | |
| TCCGCCGTTGTGGTCCGCGA+CGG | - | chr5_4:15608953-15608972 | Msa0840050:intron | 70.0% | |
| TCCGTCGCGGACCACAACGG+CGG | + | chr5_4:15608957-15608976 | None:intergenic | 70.0% | |
| !! | GCCGCCAAGAGCACCAGCCA+TGG | + | chr5_4:15609546-15609565 | None:intergenic | 70.0% |
| CGAGGAGGTTGTCGGTGCGG+TGG | - | chr5_4:15608613-15608632 | Msa0840050:CDS | 70.0% | |
| CGGTGGTGCTTCCGCCGTTG+TGG | - | chr5_4:15608943-15608962 | Msa0840050:intron | 70.0% | |
| TCCGCCGTTGTGGTCCGCGA+CGG | - | chr5_4:15608953-15608972 | Msa0840050:intron | 70.0% | |
| TCCGTCGCGGACCACAACGG+CGG | + | chr5_4:15608957-15608976 | None:intergenic | 70.0% | |
| !! | GCCGCCAAGAGCACCAGCCA+TGG | + | chr5_4:15609546-15609565 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 15607930 | 15610187 | 15607930 | ID=Msa0840050;Name=Msa0840050 |
| chr5_4 | mRNA | 15607930 | 15610187 | 15607930 | ID=Msa0840050-mRNA-1;Parent=Msa0840050;Name=Msa0840050-mRNA-1;_AED=0.23;_eAED=0.23;_QI=306|1|1|1|1|1|2|343|500 |
| chr5_4 | exon | 15607930 | 15608924 | 15607930 | ID=Msa0840050-mRNA-1:exon:6723;Parent=Msa0840050-mRNA-1 |
| chr5_4 | exon | 15609031 | 15610187 | 15609031 | ID=Msa0840050-mRNA-1:exon:6722;Parent=Msa0840050-mRNA-1 |
| chr5_4 | five_prime_UTR | 15609882 | 15610187 | 15609882 | ID=Msa0840050-mRNA-1:five_prime_utr;Parent=Msa0840050-mRNA-1 |
| chr5_4 | CDS | 15609031 | 15609881 | 15609031 | ID=Msa0840050-mRNA-1:cds;Parent=Msa0840050-mRNA-1 |
| chr5_4 | CDS | 15608273 | 15608924 | 15608273 | ID=Msa0840050-mRNA-1:cds;Parent=Msa0840050-mRNA-1 |
| chr5_4 | three_prime_UTR | 15607930 | 15608272 | 15607930 | ID=Msa0840050-mRNA-1:three_prime_utr;Parent=Msa0840050-mRNA-1 |
| Gene Sequence |
| Protein sequence |
