AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0809800

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0809800 MtrunA17_Chr5g0425431 92.233 206 16 0 2 207 573 778 1.26e-127 377
Msa0809800 MtrunA17_Chr5g0425471 91.262 206 18 0 2 207 575 780 3.25e-126 374
Msa0809800 MtrunA17_Chr5g0425531 90.821 207 19 0 1 207 577 783 7.43e-126 373
Msa0809800 MtrunA17_Chr5g0425451 90.291 206 20 0 2 207 575 780 1.44e-124 370
Msa0809800 MtrunA17_Chr3g0115601 66.507 209 70 0 1 209 568 776 4.03e-103 314
Msa0809800 MtrunA17_Chr5g0411571 41.395 215 117 2 2 209 570 782 2.24e-54 185
Msa0809800 MtrunA17_Chr2g0278761 38.571 210 119 4 2 209 574 775 5.45e-48 167
Msa0809800 MtrunA17_Chr1g0207281 39.720 214 121 5 2 209 577 788 4.64e-47 164
Msa0809800 MtrunA17_Chr4g0050591 38.647 207 119 4 2 207 573 772 1.74e-43 154
Msa0809800 MtrunA17_Chr2g0294751 38.835 206 114 4 2 205 557 752 3.14e-43 154
Msa0809800 MtrunA17_Chr1g0194841 37.321 209 121 4 2 207 554 755 9.22e-39 141
Msa0809800 MtrunA17_Chr7g0269871 36.321 212 120 7 2 207 559 761 1.04e-37 138
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0809800 AT1G78060.1 52.607 211 93 4 1 209 562 767 1.23e-72 234
Msa0809800 AT5G10560.1 42.381 210 117 1 2 207 581 790 1.71e-56 191
Msa0809800 AT5G09700.1 40.376 213 118 4 1 209 319 526 7.69e-46 159
Msa0809800 AT3G19620.1 41.667 204 105 5 2 199 563 758 8.12e-45 159
Msa0809800 AT5G09730.1 39.810 211 122 5 1 209 566 773 1.30e-44 158
Msa0809800 AT5G64570.2 40.187 214 114 4 1 207 418 624 8.76e-44 154
Msa0809800 AT5G64570.1 39.815 216 116 4 1 209 576 784 1.89e-43 155
Msa0809800 AT1G02640.1 38.140 215 107 5 2 207 561 758 1.20e-42 152
Msa0809800 AT5G49360.1 40.284 211 112 7 2 205 565 768 1.94e-40 146

Find 199 sgRNAs with CRISPR-Local

Find 391 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGCCTATGATTTGGATAAT+TGG 0.143713 5_3:+37109336 Msa0809800:five_prime_UTR
GCTATGGAATTTGTTGATTT+TGG 0.153679 5_3:-37112288 None:intergenic
CACCAAACATAAACATATTT+AGG 0.158019 5_3:+37109153 Msa0809800:five_prime_UTR
GTCTAAAAGACCGGTTATTT+TGG 0.211602 5_3:+37112623 Msa0809800:five_prime_UTR
TTTCCATTTCTACCTTTCTT+TGG 0.223144 5_3:-37113644 None:intergenic
GCTAAGGTTGATGACAAAAT+TGG 0.235556 5_3:+37112688 Msa0809800:five_prime_UTR
TCTTCATCACAGGTTGTTCT+AGG 0.255790 5_3:+37112333 Msa0809800:five_prime_UTR
AAGCAGAAGGGATGACGTTT+TGG 0.256760 5_3:+37109129 Msa0809800:five_prime_UTR
TCTTGCCCTCTTCCCCATCT+TGG 0.264739 5_3:-37109179 None:intergenic
TTAGGTCACTTTGCAAGATT+TGG 0.269798 5_3:+37109748 Msa0809800:intron
CCTTTGGTAAATTCAAAATA+TGG 0.279563 5_3:+37109218 Msa0809800:five_prime_UTR
ACACTTTACTGCCTATGATT+TGG 0.287027 5_3:+37109328 Msa0809800:five_prime_UTR
ACAAATTCCATAGCAGTTAT+AGG 0.297195 5_3:+37112297 Msa0809800:five_prime_UTR
TTGCACGGCGTTGCAGATTA+TGG 0.298346 5_3:+37108314 Msa0809800:five_prime_UTR
GCACGGTCGATTTGAGATAT+TGG 0.319875 5_3:-37112084 None:intergenic
TGATTATATTGTGTTGGTTA+TGG 0.329378 5_3:+37112506 Msa0809800:five_prime_UTR
AAACTGAAATATGGTAAAAT+TGG 0.329503 5_3:+37112165 Msa0809800:five_prime_UTR
ACTGATCCTGTACCAAAGTT+TGG 0.330237 5_3:-37108423 None:intergenic
GGTAAGAGAGAGGGAGAGGG+AGG 0.331219 5_3:-37114010 None:intergenic
ATCTATTCTCCATTAGAATA+AGG 0.335391 5_3:+37112115 Msa0809800:five_prime_UTR
AATCCAACCAAACTGAAATA+TGG 0.335707 5_3:+37112156 Msa0809800:five_prime_UTR
TACAAACTTGTTTCAGAGTT+AGG 0.340365 5_3:+37113524 Msa0809800:CDS
CAGCTTCTAGAGCTATGTTT+AGG 0.343961 5_3:-37112215 None:intergenic
TTAGCAAAAGTAATATCAAT+AGG 0.354987 5_3:-37112670 None:intergenic
GATTATATTGTGTTGGTTAT+GGG 0.360208 5_3:+37112507 Msa0809800:five_prime_UTR
CTTGCCCTCTTCCCCATCTT+GGG 0.360373 5_3:-37109178 None:intergenic
ACATTGGGAATTACAAATAC+TGG 0.364595 5_3:+37113581 Msa0809800:CDS
TCCCTAAATATGTTTATGTT+TGG 0.371836 5_3:-37109155 None:intergenic
CATGTCCATTTCTGTAACAT+TGG 0.372834 5_3:+37113565 Msa0809800:CDS
GCTCTTGCTCAGGTTGTGTT+TGG 0.373522 5_3:+37112754 Msa0809800:CDS
AGCAAATGAGGGTGGTGTTA+AGG 0.377410 5_3:+37113766 Msa0809800:CDS
AACAACCTGTGATGAAGAAT+TGG 0.377908 5_3:-37112328 None:intergenic
AAATTGTAATCTGCACAGTT+TGG 0.378145 5_3:-37109860 None:intergenic
TTTCCAATTATCCAAATCAT+AGG 0.378532 5_3:-37109339 None:intergenic
CTTCAAGGAGATTCCTTTGA+AGG 0.385860 5_3:+37109260 Msa0809800:five_prime_UTR
GGTCCAAAGGTCTACGAATT+CGG 0.387773 5_3:+37113386 Msa0809800:CDS
TTTGACGGAAATGAAGTTGT+AGG 0.388452 5_3:-37113435 None:intergenic
ATAAGTTCCTGTTGCTTCCC+TGG 0.392242 5_3:-37112582 None:intergenic
GTTGTTCTAGGAAACTATTT+TGG 0.393026 5_3:+37112345 Msa0809800:five_prime_UTR
TAATCCTAGCCTTATTCTAA+TGG 0.396762 5_3:-37112124 None:intergenic
AATTCCCAATGTTACAGAAA+TGG 0.398418 5_3:-37113570 None:intergenic
ACCAAACATAAACATATTTA+GGG 0.398770 5_3:+37109154 Msa0809800:five_prime_UTR
TGTGATGAAGAATTGGCATT+TGG 0.399013 5_3:-37112321 None:intergenic
GAACAATACACAATAAATAT+TGG 0.399508 5_3:+37113827 Msa0809800:CDS
AGGAATAATTTGAGTAGCTT+AGG 0.401616 5_3:-37113415 None:intergenic
AATTTGGTAACACTATTAGA+AGG 0.405497 5_3:+37112378 Msa0809800:five_prime_UTR
TAGCCGAATTCGTAGACCTT+TGG 0.407677 5_3:-37113389 None:intergenic
AACCCCACCAACTGTTTCAC+TGG 0.411217 5_3:-37113668 None:intergenic
TGGTGGAATGGCTCTTGCTC+AGG 0.412349 5_3:+37112744 Msa0809800:exon
ACAAATACTGGAAGAATGGC+TGG 0.416046 5_3:+37113593 Msa0809800:CDS
GCTGGTTATCCTGGTGAACT+TGG 0.417730 5_3:+37112724 Msa0809800:five_prime_UTR
GTGTTTAGCTCTTTCAATGA+TGG 0.418065 5_3:-37108186 None:intergenic
GTTGAGATTGCAGAAAGTAT+AGG 0.419183 5_3:-37108159 None:intergenic
ATTGTACACTGCTCTTGCTT+CGG 0.426048 5_3:-37109099 None:intergenic
ATTGAAGTTATTTGTTCCAC+TGG 0.431660 5_3:+37113914 Msa0809800:three_prime_UTR
TATTGTGTTGGTTATGGGAT+TGG 0.433124 5_3:+37112512 Msa0809800:five_prime_UTR
TATTATAATTTATACATGAT+AGG 0.433680 5_3:+37110298 Msa0809800:five_prime_UTR
GGTAAAGGGATAAGATTGAA+TGG 0.438016 5_3:+37108335 Msa0809800:five_prime_UTR
AAGCCAAAGAAAGGTAGAAA+TGG 0.439382 5_3:+37113641 Msa0809800:CDS
CTCATTCTCATGTCTGTCAT+TGG 0.443342 5_3:-37113314 None:intergenic
GTTGTATGCAACTATGAAAT+GGG 0.444200 5_3:-37109787 None:intergenic
CACAAAAGTACCAAAATAAC+CGG 0.444513 5_3:-37112633 None:intergenic
GTGATGAAGAATTGGCATTT+GGG 0.445187 5_3:-37112320 None:intergenic
GGAGAGGGAGGGTATGAAGA+AGG 0.447707 5_3:-37113998 None:intergenic
GCAGGTGAAACGCGCGAAGT+TGG 0.453444 5_3:+37113710 Msa0809800:CDS
TTGATTCCAAACTTTGGTAC+AGG 0.453920 5_3:+37108417 Msa0809800:five_prime_UTR
TGTTTATGTTCTAAGTGCAT+TGG 0.454704 5_3:+37114062 Msa0809800:three_prime_UTR
GAGATGAAAGTAATGGTGAT+AGG 0.455046 5_3:-37108038 None:intergenic
TGTTGTATGCAACTATGAAA+TGG 0.455401 5_3:-37109788 None:intergenic
TTGGGGTAAGAGAGAGGGAG+AGG 0.457544 5_3:-37114014 None:intergenic
TTGGTGGTGTCACAGGAGTA+AGG 0.458091 5_3:-37108122 None:intergenic
ATGTCCATTTCTGTAACATT+GGG 0.459363 5_3:+37113566 Msa0809800:CDS
TTTATCCTTCCCTCTCAACA+TGG 0.459798 5_3:+37108007 Msa0809800:five_prime_UTR
TCACTCCACCATTGGTAACT+AGG 0.459816 5_3:-37108287 None:intergenic
AGAGATGACTTAGAGTTGCC+AGG 0.461498 5_3:+37112564 Msa0809800:five_prime_UTR
GACAGCTGGTGAAGACCCTT+TGG 0.462155 5_3:+37109202 Msa0809800:five_prime_UTR
ATAAGGCTAGGATTATTTGA+TGG 0.462240 5_3:+37112132 Msa0809800:five_prime_UTR
GAGAGTGTGAAGGTGGAAGC+AGG 0.462428 5_3:+37113692 Msa0809800:CDS
GGTATACCGAGTCGAGGAAT+AGG 0.464133 5_3:-37108266 None:intergenic
GATCCATCATCAGGCTATCC+TGG 0.464763 5_3:+37113341 Msa0809800:CDS
TGGTGGTGTCACAGGAGTAA+GGG 0.464811 5_3:-37108121 None:intergenic
ACATATTTAGGGACCCAAGA+TGG 0.464899 5_3:+37109165 Msa0809800:five_prime_UTR
TAAGAACATTGTGTATCATC+CGG 0.469744 5_3:+37112416 Msa0809800:five_prime_UTR
TAGCAAAAGTAATATCAATA+GGG 0.473778 5_3:-37112669 None:intergenic
TCTTATGTGAGAGGACTTCA+AGG 0.474991 5_3:+37109245 Msa0809800:five_prime_UTR
TTACCATATTTCAGTTTGGT+TGG 0.475211 5_3:-37112159 None:intergenic
TAGCTCTTTCAATGATGGTA+AGG 0.477604 5_3:-37108181 None:intergenic
TGGGGTAAGAGAGAGGGAGA+GGG 0.478382 5_3:-37114013 None:intergenic
GGCGTTGCAGATTATGGTAA+AGG 0.479648 5_3:+37108320 Msa0809800:five_prime_UTR
CATATTTAGGGACCCAAGAT+GGG 0.480274 5_3:+37109166 Msa0809800:five_prime_UTR
TTACAATTTATTAACCAATA+CGG 0.480351 5_3:+37109874 Msa0809800:five_prime_UTR
AATAGTGTTACCAAATTACA+TGG 0.482505 5_3:-37112372 None:intergenic
AATTACAAATACTGGAAGAA+TGG 0.483225 5_3:+37113589 Msa0809800:CDS
ATTAAGTTTCCCACCTTCAA+AGG 0.485850 5_3:-37109273 None:intergenic
AGAAGTTGATTATATTGTGT+TGG 0.488683 5_3:+37112500 Msa0809800:five_prime_UTR
TCCTGGTGAACTTGGTGGAA+TGG 0.490265 5_3:+37112732 Msa0809800:exon
GCGTTGCAGATTATGGTAAA+GGG 0.492956 5_3:+37108321 Msa0809800:five_prime_UTR
CTTTAGCAACTTGAACTGCT+TGG 0.493813 5_3:-37112479 None:intergenic
GGTTATCCTGGTGAACTTGG+TGG 0.494580 5_3:+37112727 Msa0809800:five_prime_UTR
CAAGGAGATTCCTTTGAAGG+TGG 0.495290 5_3:+37109263 Msa0809800:five_prime_UTR
GGTCACTTTGCAAGATTTGG+AGG 0.497161 5_3:+37109751 Msa0809800:intron
AGAGTTGCCAGGGAAGCAAC+AGG 0.501432 5_3:+37112575 Msa0809800:five_prime_UTR
AGGTGATTATTTATTAGCTG+TGG 0.503133 5_3:+37113799 Msa0809800:CDS
GTATCGAATGAGTGGTTGAT+TGG 0.504227 5_3:-37113478 None:intergenic
CTGTTTGTGAAGCCAAAGAA+AGG 0.504938 5_3:+37113632 Msa0809800:CDS
AAGAGGGTTGGTGGTGTCAC+AGG 0.505365 5_3:-37108129 None:intergenic
GTGTTTGGTGACTATAACCC+TGG 0.507043 5_3:+37112769 Msa0809800:CDS
GTAAAGGGATAAGATTGAAT+GGG 0.508832 5_3:+37108336 Msa0809800:five_prime_UTR
GGTGATTATTTATTAGCTGT+GGG 0.509373 5_3:+37113800 Msa0809800:CDS
ATGAGAGCTGATCCATCATC+AGG 0.511303 5_3:+37113332 Msa0809800:CDS
GAGATGACTTAGAGTTGCCA+GGG 0.512803 5_3:+37112565 Msa0809800:five_prime_UTR
GTAAGAGAGAGGGAGAGGGA+GGG 0.513526 5_3:-37114009 None:intergenic
CATCGTGTCACGGCTTACAT+TGG 0.517461 5_3:+37108208 Msa0809800:five_prime_UTR
TGGTTGATTGGTTGATGTGA+AGG 0.520554 5_3:-37113466 None:intergenic
GGGTACATGAGTTGGTGAAT+CGG 0.520809 5_3:-37108099 None:intergenic
GGGACCCAAGATGGGGAAGA+GGG 0.522405 5_3:+37109174 Msa0809800:five_prime_UTR
CTACCAGGATAGCCTGATGA+TGG 0.523266 5_3:-37113344 None:intergenic
GGTAAGTAACCCATGTTGAG+AGG 0.523554 5_3:-37108017 None:intergenic
GGGGTTTGAGAGTGTGAAGG+TGG 0.524489 5_3:+37113685 Msa0809800:CDS
ACATCTGCTACAGCATCCTC+AGG 0.525229 5_3:-37110339 None:intergenic
GCAAGAGCAGTGTACAATGC+TGG 0.525450 5_3:+37109104 Msa0809800:five_prime_UTR
AAATGCCAATTCTTCATCAC+AGG 0.526357 5_3:+37112323 Msa0809800:five_prime_UTR
GCAACGCTTCACTCCACCAT+TGG 0.528569 5_3:-37108295 None:intergenic
ATGAAGAAGGAAAATAAACT+TGG 0.529530 5_3:-37113985 None:intergenic
GGATCTTAGTATAGCAAATG+AGG 0.530336 5_3:+37113754 Msa0809800:CDS
TGTGCTTACAACCGTGTCAA+TGG 0.530376 5_3:+37109833 Msa0809800:five_prime_UTR
AGGGACCCAAGATGGGGAAG+AGG 0.531909 5_3:+37109173 Msa0809800:five_prime_UTR
CAGCAATGAGGATAACTTGA+GGG 0.535646 5_3:-37108388 None:intergenic
AAGGTCTACGAATTCGGCTA+TGG 0.539382 5_3:+37113392 Msa0809800:CDS
CCTTTGGACCTGTGTAGAAA+CGG 0.540578 5_3:-37113373 None:intergenic
GGTGGGGTTTGAGAGTGTGA+AGG 0.543551 5_3:+37113682 Msa0809800:CDS
TGTTAAAGCGTCTAAAAGAC+CGG 0.544635 5_3:+37112614 Msa0809800:five_prime_UTR
GGCTTCACAAACAGCAACAC+AGG 0.545539 5_3:-37113623 None:intergenic
TTATCCTTCCCTCTCAACAT+GGG 0.546835 5_3:+37108008 Msa0809800:five_prime_UTR
GCTCTAGAAGCTGCAAGAAG+CGG 0.547407 5_3:+37112225 Msa0809800:five_prime_UTR
AAGGAGATTCCTTTGAAGGT+GGG 0.551664 5_3:+37109264 Msa0809800:five_prime_UTR
CAATGTTACAGAAATGGACA+TGG 0.553553 5_3:-37113564 None:intergenic
TGGTAGAGTCGAGGATTGAA+AGG 0.553718 5_3:-37113965 None:intergenic
GCCATTCCACCAAGTTCACC+AGG 0.555057 5_3:-37112733 None:intergenic
AATGGAGAATAGATTGTGTA+GGG 0.557476 5_3:-37112106 None:intergenic
ATCCAGTGAAACAGTTGGTG+GGG 0.558413 5_3:+37113666 Msa0809800:CDS
TACAATGCTGGACAAGCAGA+AGG 0.560273 5_3:+37109116 Msa0809800:five_prime_UTR
ATTTGGGCCTATAACTGCTA+TGG 0.563934 5_3:-37112304 None:intergenic
GGAAGAGGGCAAGAGACAGC+TGG 0.570323 5_3:+37109188 Msa0809800:five_prime_UTR
TAATGGAGAATAGATTGTGT+AGG 0.575658 5_3:-37112107 None:intergenic
AATGAAAGAGATGAAAGTAA+TGG 0.575922 5_3:-37108045 None:intergenic
AATCCAGTGAAACAGTTGGT+GGG 0.576108 5_3:+37113665 Msa0809800:CDS
AAGGTTGATGACAAAATTGG+AGG 0.577411 5_3:+37112691 Msa0809800:five_prime_UTR
GTAGCAGATGTACTTCAAGC+TGG 0.587190 5_3:+37110351 Msa0809800:five_prime_UTR
TATGGTGTTTCTTATGTGAG+AGG 0.587329 5_3:+37109236 Msa0809800:five_prime_UTR
GGTGGTGTCACAGGAGTAAG+GGG 0.588214 5_3:-37108120 None:intergenic
ACTCTGAAACAAGTTTGTAA+CGG 0.590668 5_3:-37113520 None:intergenic
AAGAACATTGTGTATCATCC+GGG 0.592974 5_3:+37112417 Msa0809800:five_prime_UTR
CAAATACTGGAAGAATGGCT+GGG 0.595030 5_3:+37113594 Msa0809800:CDS
GTAAGTAACCCATGTTGAGA+GGG 0.601237 5_3:-37108016 None:intergenic
TTCGTTCCATCACTACATCC+CGG 0.603600 5_3:-37112435 None:intergenic
GGTGTTAAGGTGATTGAAGA+AGG 0.603997 5_3:+37113779 Msa0809800:CDS
TAATTTATACATGATAGGCA+AGG 0.605270 5_3:+37110303 Msa0809800:five_prime_UTR
ATTTATTAACCAATACGGCA+AGG 0.607529 5_3:+37109879 Msa0809800:five_prime_UTR
TAGAAACGGTAGGTTCTACC+AGG 0.607742 5_3:-37113359 None:intergenic
ACTTTGGTACAGGATCAGTA+AGG 0.608622 5_3:+37108427 Msa0809800:five_prime_UTR
TTCTCCATTAGAATAAGGCT+AGG 0.609069 5_3:+37112120 Msa0809800:five_prime_UTR
CCGTTTCTACACAGGTCCAA+AGG 0.609130 5_3:+37113373 Msa0809800:CDS
AGAACCTACCGTTTCTACAC+AGG 0.612051 5_3:+37113365 Msa0809800:CDS
TGGTGGAGTGAAGCGTTGCA+CGG 0.613746 5_3:+37108299 Msa0809800:five_prime_UTR
GATCTTAGTATAGCAAATGA+GGG 0.614056 5_3:+37113755 Msa0809800:CDS
GTAACCCATGTTGAGAGGGA+AGG 0.616798 5_3:-37108012 None:intergenic
TATCATCCGGGATGTAGTGA+TGG 0.617860 5_3:+37112429 Msa0809800:five_prime_UTR
ATACCGAGTCGAGGAATAGG+TGG 0.618401 5_3:-37108263 None:intergenic
AAATCCAGTGAAACAGTTGG+TGG 0.621488 5_3:+37113664 Msa0809800:CDS
GTGAATCGGCATGAACGAGT+TGG 0.622493 5_3:-37108085 None:intergenic
TGGACCTGTGTAGAAACGGT+AGG 0.625209 5_3:-37113369 None:intergenic
TTTGGATAATTGGAAAGGTG+TGG 0.625588 5_3:+37109346 Msa0809800:five_prime_UTR
GTGTTACCAAATTACATGGA+CGG 0.629385 5_3:-37112368 None:intergenic
AAATAAACTTGGTAGAGTCG+AGG 0.633132 5_3:-37113974 None:intergenic
TGGAAATCCAGTGAAACAGT+TGG 0.633357 5_3:+37113661 Msa0809800:CDS
AGAATAGATTGTGTAGGGCA+CGG 0.634890 5_3:-37112101 None:intergenic
TATGATTTGGATAATTGGAA+AGG 0.637158 5_3:+37109341 Msa0809800:five_prime_UTR
TCGGTATACCTAGTTACCAA+TGG 0.640951 5_3:+37108279 Msa0809800:five_prime_UTR
GAGCTAAACACATCGTGTCA+CGG 0.640988 5_3:+37108198 Msa0809800:five_prime_UTR
ATACAACAAGGACGGTCTAG+TGG 0.647044 5_3:+37109803 Msa0809800:five_prime_UTR
TCAGGGATGGATGTAGAGTG+TGG 0.648701 5_3:+37112012 Msa0809800:intron
GCAGCAATGAGGATAACTTG+AGG 0.649385 5_3:-37108389 None:intergenic
GCTCCACCTATTCCTCGACT+CGG 0.651999 5_3:+37108260 Msa0809800:five_prime_UTR
GATCAAAGTCAAGAGAGTGA+AGG 0.652019 5_3:+37112534 Msa0809800:five_prime_UTR
ATTTGAAGTAAGTGTTTGTG+AGG 0.652263 5_3:+37113733 Msa0809800:CDS
ATAGTTGCATACAACAAGGA+CGG 0.656710 5_3:+37109795 Msa0809800:five_prime_UTR
GTATACCTAGTTACCAATGG+TGG 0.657300 5_3:+37108282 Msa0809800:five_prime_UTR
AGGTTATGCAAAAGCACCTG+AGG 0.657674 5_3:+37110323 Msa0809800:five_prime_UTR
TTGTATGCAACTATGAAATG+GGG 0.657868 5_3:-37109786 None:intergenic
AGTTTGGAACTCCATTGACA+CGG 0.658172 5_3:-37109844 None:intergenic
ATATTTAGGGACCCAAGATG+GGG 0.678025 5_3:+37109167 Msa0809800:five_prime_UTR
ACAATGCTGGACAAGCAGAA+GGG 0.678523 5_3:+37109117 Msa0809800:five_prime_UTR
AATCAAAAGAAGCAGCAATG+AGG 0.679678 5_3:-37108400 None:intergenic
CTTAGTATAGCAAATGAGGG+TGG 0.685423 5_3:+37113758 Msa0809800:CDS
TAACTAGGTATACCGAGTCG+AGG 0.691940 5_3:-37108272 None:intergenic
GTGGTGTCACAGGAGTAAGG+GGG 0.708710 5_3:-37108119 None:intergenic
TTTCATAGTTGCATACAACA+AGG 0.712280 5_3:+37109791 Msa0809800:five_prime_UTR
TGTATGCAACTATGAAATGG+GGG 0.725926 5_3:-37109785 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAATACACTTATTTTAAAA+CGG - chr5_3:37109423-37109442 None:intergenic 10.0%
!!! TTAAAATACTTTGTATTTTA+GGG + chr5_3:37109482-37109501 Msa0809800:intron 10.0%
!! AAATTGATCTTATTAATTAT+TGG + chr5_3:37109529-37109548 Msa0809800:intron 10.0%
!! ATAACTAATAAGATTAAAAA+TGG - chr5_3:37109660-37109679 None:intergenic 10.0%
!!! TTTTTAATCTTATTAGTTAT+TGG + chr5_3:37109660-37109679 Msa0809800:intron 10.0%
!!! TTCTTATATTATTAAACTTT+TGG + chr5_3:37109688-37109707 Msa0809800:intron 10.0%
!! TATTATAATTTATACATGAT+AGG + chr5_3:37110298-37110317 Msa0809800:five_prime_UTR 10.0%
!! TGAAAAACATATATTTATAA+AGG - chr5_3:37110391-37110410 None:intergenic 10.0%
!!! TATTTTAGTTGTTTTAATTT+TGG + chr5_3:37111372-37111391 Msa0809800:intron 10.0%
!!! TTGAAATTTTATCAAAATGT+TGG + chr5_3:37108474-37108493 Msa0809800:intron 15.0%
!! TTCTTAAAAATATCAAACAT+AGG - chr5_3:37108530-37108549 None:intergenic 15.0%
!!! ATTTTACGATCATTATAATA+AGG - chr5_3:37108607-37108626 None:intergenic 15.0%
!! TTATTATAATGATCGTAAAA+TGG + chr5_3:37108606-37108625 Msa0809800:intron 15.0%
!!! TATTTGCTATTATGTATTTT+AGG + chr5_3:37108996-37109015 Msa0809800:intron 15.0%
!!! TTTTGTTTCAATTGTTATTA+TGG + chr5_3:37109049-37109068 Msa0809800:intron 15.0%
!!! TTTGTTTCAATTGTTATTAT+GGG + chr5_3:37109050-37109069 Msa0809800:intron 15.0%
!!! GTATTTTAAGTTTTTATGAA+TGG + chr5_3:37109436-37109455 Msa0809800:intron 15.0%
!!! GTTAAAATACTTTGTATTTT+AGG + chr5_3:37109481-37109500 Msa0809800:intron 15.0%
!!! TTCTTATATTGTTAAACTTT+TGG + chr5_3:37109557-37109576 Msa0809800:intron 15.0%
!! AGAATTAGATTATTCTTAAA+TGG - chr5_3:37109721-37109740 None:intergenic 15.0%
!! AATCTAATTCTATTCAAATT+AGG + chr5_3:37109730-37109749 Msa0809800:intron 15.0%
!! TTACAATTTATTAACCAATA+CGG + chr5_3:37109874-37109893 Msa0809800:five_prime_UTR 15.0%
!!! ATTTTATCTTTTTGAAACAA+TGG + chr5_3:37110089-37110108 Msa0809800:intron 15.0%
!!! AATTAGTTTACAAAATATGT+GGG - chr5_3:37110186-37110205 None:intergenic 15.0%
!!! AAATTAGTTTACAAAATATG+TGG - chr5_3:37110187-37110206 None:intergenic 15.0%
!!! ATTTTTTTTACTGTCAAAAA+AGG + chr5_3:37110246-37110265 Msa0809800:intron 15.0%
!!! ATACTAGTTCATATTTTATA+CGG + chr5_3:37110457-37110476 Msa0809800:intron 15.0%
!!! AGTTTTATTAAAGGAAAATA+TGG - chr5_3:37110751-37110770 None:intergenic 15.0%
!!! AACGTTTATAGTTTTATTAA+AGG - chr5_3:37110760-37110779 None:intergenic 15.0%
!!! AATAAAACTATAAACGTTTT+TGG + chr5_3:37110762-37110781 Msa0809800:intron 15.0%
!! AATATGAATGAAAAATACAA+GGG - chr5_3:37110890-37110909 None:intergenic 15.0%
!! TAATATGAATGAAAAATACA+AGG - chr5_3:37110891-37110910 None:intergenic 15.0%
!! ATCAAGATTTCAAAATTAAA+CGG - chr5_3:37112912-37112931 None:intergenic 15.0%
!! ATAATCAAAGTTTCAAATTA+TGG - chr5_3:37113132-37113151 None:intergenic 15.0%
!!! AAAAAGTATGATCATAAATT+TGG - chr5_3:37113179-37113198 None:intergenic 15.0%
!! AATTTCAACCATGAATTTAA+AGG - chr5_3:37108462-37108481 None:intergenic 20.0%
!!! TTGTTTCAATTGTTATTATG+GGG + chr5_3:37109051-37109070 Msa0809800:intron 20.0%
!! ACCAAACATAAACATATTTA+GGG + chr5_3:37109154-37109173 Msa0809800:five_prime_UTR 20.0%
!!! CATATTTTGAATTTACCAAA+GGG - chr5_3:37109220-37109239 None:intergenic 20.0%
!! AGATTTGGATTATTCTTAAT+TGG - chr5_3:37109590-37109609 None:intergenic 20.0%
!! TGAACTAAATTGAATAGATT+TGG - chr5_3:37109605-37109624 None:intergenic 20.0%
!! ACTAATAAGATTAAAAATGG+AGG - chr5_3:37109657-37109676 None:intergenic 20.0%
!!! TTTGTTTTCACTTTTGAATT+AGG - chr5_3:37110017-37110036 None:intergenic 20.0%
!!! TTAATTTGACACATAAAAGT+CGG - chr5_3:37110502-37110521 None:intergenic 20.0%
!!! GCTTTTCTAACTTATAATTT+TGG + chr5_3:37110687-37110706 Msa0809800:intron 20.0%
!! ATTGTTAAAAAAGACTATGA+TGG - chr5_3:37110974-37110993 None:intergenic 20.0%
!! TTGTTTATAGGAAAATTCTT+GGG + chr5_3:37111055-37111074 Msa0809800:intron 20.0%
!! AAAAAGAAGAAGAAAGAAAT+TGG + chr5_3:37111162-37111181 Msa0809800:intron 20.0%
!! ATACAAAATACAAAAGAAGA+AGG - chr5_3:37111418-37111437 None:intergenic 20.0%
!!! AATTTTACCATATTTCAGTT+TGG - chr5_3:37112166-37112185 None:intergenic 20.0%
!! AAACTGAAATATGGTAAAAT+TGG + chr5_3:37112165-37112184 Msa0809800:five_prime_UTR 20.0%
!! TAGCAAAAGTAATATCAATA+GGG - chr5_3:37112672-37112691 None:intergenic 20.0%
!! TTAGCAAAAGTAATATCAAT+AGG - chr5_3:37112673-37112692 None:intergenic 20.0%
!!! TATTGATATTACTTTTGCTA+AGG + chr5_3:37112672-37112691 Msa0809800:five_prime_UTR 20.0%
!! GTTCTTAAATATATTTGACA+TGG - chr5_3:37113066-37113085 None:intergenic 20.0%
!!! TATATTTAAGAACAGTTTTC+TGG + chr5_3:37113073-37113092 Msa0809800:intron 20.0%
!!! GTATTTTGATGAAATCTTTT+GGG - chr5_3:37113295-37113314 None:intergenic 20.0%
!! GAACAATACACAATAAATAT+TGG + chr5_3:37113827-37113846 Msa0809800:CDS 20.0%
!! AACAAAAATCTGAAAAAAAG+AGG - chr5_3:37113944-37113963 None:intergenic 20.0%
!!! AAAACTCAAGAAAGAATTTT+GGG - chr5_3:37114035-37114054 None:intergenic 20.0%
!!! AAAAACTCAAGAAAGAATTT+TGG - chr5_3:37114036-37114055 None:intergenic 20.0%
! AATGAAAGAGATGAAAGTAA+TGG - chr5_3:37108048-37108067 None:intergenic 25.0%
!! AAGTATAGGATTTTGTAAGA+GGG - chr5_3:37108148-37108167 None:intergenic 25.0%
!! AAAGTATAGGATTTTGTAAG+AGG - chr5_3:37108149-37108168 None:intergenic 25.0%
! CACCAAACATAAACATATTT+AGG + chr5_3:37109153-37109172 Msa0809800:five_prime_UTR 25.0%
! TCCCTAAATATGTTTATGTT+TGG - chr5_3:37109158-37109177 None:intergenic 25.0%
!!! CCATATTTTGAATTTACCAA+AGG - chr5_3:37109221-37109240 None:intergenic 25.0%
! CCTTTGGTAAATTCAAAATA+TGG + chr5_3:37109218-37109237 Msa0809800:five_prime_UTR 25.0%
! TTTCCAATTATCCAAATCAT+AGG - chr5_3:37109342-37109361 None:intergenic 25.0%
!! TATGATTTGGATAATTGGAA+AGG + chr5_3:37109341-37109360 Msa0809800:five_prime_UTR 25.0%
!! CGAAGAAAGAAAACTTATTT+TGG - chr5_3:37109390-37109409 None:intergenic 25.0%
!!! TACACTTATTTTAAAACGGA+TGG - chr5_3:37109419-37109438 None:intergenic 25.0%
! AGGAAAAAATGGAATTTCAA+TGG + chr5_3:37109899-37109918 Msa0809800:five_prime_UTR 25.0%
! GGAAAAAATGGAATTTCAAT+GGG + chr5_3:37109900-37109919 Msa0809800:five_prime_UTR 25.0%
! ATGTGGGCAAATTAAAAAAA+AGG - chr5_3:37110170-37110189 None:intergenic 25.0%
!! TCAAAAAAGGTATATTACGT+CGG + chr5_3:37110259-37110278 Msa0809800:intron 25.0%
! TAATTTATACATGATAGGCA+AGG + chr5_3:37110303-37110322 Msa0809800:five_prime_UTR 25.0%
! TGTGATTATGATATAGACAA+AGG - chr5_3:37110539-37110558 None:intergenic 25.0%
!! TTTTGGTCAGTTTACATTTT+AGG + chr5_3:37110704-37110723 Msa0809800:intron 25.0%
! TTAAAGGAAAATATGGAGTA+TGG - chr5_3:37110744-37110763 None:intergenic 25.0%
!!! ACTGATCATCTATTTTGTTT+AGG + chr5_3:37110785-37110804 Msa0809800:intron 25.0%
! TTTCATTCATATTACTAGCA+TGG + chr5_3:37110897-37110916 Msa0809800:intron 25.0%
!! TAAGTCCAACAGTAAATTTT+TGG - chr5_3:37111016-37111035 None:intergenic 25.0%
! CTTGTTTATAGGAAAATTCT+TGG + chr5_3:37111054-37111073 Msa0809800:intron 25.0%
!!! AGTGACCAAATCAAATTTTT+TGG + chr5_3:37111201-37111220 Msa0809800:intron 25.0%
! CATGACCAAAAAATTTGATT+TGG - chr5_3:37111209-37111228 None:intergenic 25.0%
! AAATTGTGGACATATAAACA+AGG - chr5_3:37111256-37111275 None:intergenic 25.0%
!!! TCAATTTTTTTAGGTTGTAC+TGG - chr5_3:37111282-37111301 None:intergenic 25.0%
!! AGATTTTGTCTTTGGTTAAA+AGG - chr5_3:37111510-37111529 None:intergenic 25.0%
! ATTGAGACTCAAATTTAAGT+TGG + chr5_3:37111676-37111695 Msa0809800:intron 25.0%
! ATCTATTCTCCATTAGAATA+AGG + chr5_3:37112115-37112134 Msa0809800:five_prime_UTR 25.0%
!!! AATTTGTTGATTTTGGAAGT+GGG - chr5_3:37112284-37112303 None:intergenic 25.0%
! AATAGTGTTACCAAATTACA+TGG - chr5_3:37112375-37112394 None:intergenic 25.0%
!! AATTTGGTAACACTATTAGA+AGG + chr5_3:37112378-37112397 Msa0809800:five_prime_UTR 25.0%
!! AGAAGTTGATTATATTGTGT+TGG + chr5_3:37112500-37112519 Msa0809800:five_prime_UTR 25.0%
!!! TGATTATATTGTGTTGGTTA+TGG + chr5_3:37112506-37112525 Msa0809800:five_prime_UTR 25.0%
!!! GATTATATTGTGTTGGTTAT+GGG + chr5_3:37112507-37112526 Msa0809800:five_prime_UTR 25.0%
!!! TATGTGGGTTTATTTTTTCA+TGG - chr5_3:37112817-37112836 None:intergenic 25.0%
! TGAAAAAATAAACCCACATA+AGG + chr5_3:37112817-37112836 Msa0809800:intron 25.0%
!!! ATTTTTTTACCACCTTATGT+GGG - chr5_3:37112832-37112851 None:intergenic 25.0%
!!! ACTATTGCAGACTATTTTTA+TGG - chr5_3:37113012-37113031 None:intergenic 25.0%
!! ATTAGTTGAGTAGTAGTTTT+AGG - chr5_3:37113214-37113233 None:intergenic 25.0%
! TAAAACTACTACTCAACTAA+TGG + chr5_3:37113213-37113232 Msa0809800:intron 25.0%
! TTATTTAATCACTACAATGC+AGG + chr5_3:37113245-37113264 Msa0809800:intron 25.0%
! TATTTAATCACTACAATGCA+GGG + chr5_3:37113246-37113265 Msa0809800:intron 25.0%
!!! GGTATTTTGATGAAATCTTT+TGG - chr5_3:37113296-37113315 None:intergenic 25.0%
! AATTACAAATACTGGAAGAA+TGG + chr5_3:37113589-37113608 Msa0809800:CDS 25.0%
! ATGAAGAAGGAAAATAAACT+TGG - chr5_3:37113988-37114007 None:intergenic 25.0%
!! AAACTCAAGAAAGAATTTTG+GGG - chr5_3:37114034-37114053 None:intergenic 25.0%
GTAAAGGGATAAGATTGAAT+GGG + chr5_3:37108336-37108355 Msa0809800:five_prime_UTR 30.0%
!! CTTCTTTTGATTCCAAACTT+TGG + chr5_3:37108411-37108430 Msa0809800:five_prime_UTR 30.0%
TAGTCACTCCTTTAAATTCA+TGG + chr5_3:37108451-37108470 Msa0809800:intron 30.0%
TTAGTTCACTTTGCAAGATT+TGG + chr5_3:37109617-37109636 Msa0809800:intron 30.0%
TTGTATGCAACTATGAAATG+GGG - chr5_3:37109789-37109808 None:intergenic 30.0%
GTTGTATGCAACTATGAAAT+GGG - chr5_3:37109790-37109809 None:intergenic 30.0%
TGTTGTATGCAACTATGAAA+TGG - chr5_3:37109791-37109810 None:intergenic 30.0%
TTTCATAGTTGCATACAACA+AGG + chr5_3:37109791-37109810 Msa0809800:five_prime_UTR 30.0%
AAATTGTAATCTGCACAGTT+TGG - chr5_3:37109863-37109882 None:intergenic 30.0%
ATTTATTAACCAATACGGCA+AGG + chr5_3:37109879-37109898 Msa0809800:five_prime_UTR 30.0%
! GAAATGTCACATTCACATTT+TGG - chr5_3:37110226-37110245 None:intergenic 30.0%
TACGGTATGAGATTCAATAT+CGG + chr5_3:37110475-37110494 Msa0809800:intron 30.0%
TTAGAAAAGCAACTTTCCAT+TGG - chr5_3:37110677-37110696 None:intergenic 30.0%
TTCATATTACTAGCATGGTT+TGG + chr5_3:37110902-37110921 Msa0809800:intron 30.0%
ACAATGACATGAAGATATGT+GGG - chr5_3:37110948-37110967 None:intergenic 30.0%
TACAATGACATGAAGATATG+TGG - chr5_3:37110949-37110968 None:intergenic 30.0%
ACATATCTTCATGTCATTGT+AGG + chr5_3:37110948-37110967 Msa0809800:intron 30.0%
TCAGTCCAAAAATTTACTGT+TGG + chr5_3:37111008-37111027 Msa0809800:intron 30.0%
GGAATGAACTACTTGTTTAT+AGG + chr5_3:37111043-37111062 Msa0809800:intron 30.0%
TTTATAGGAAAATTCTTGGG+TGG + chr5_3:37111058-37111077 Msa0809800:intron 30.0%
TTGGACCAAGAATATGAATT+TGG + chr5_3:37111083-37111102 Msa0809800:intron 30.0%
TGTGACCAAATTCATATTCT+TGG - chr5_3:37111091-37111110 None:intergenic 30.0%
TCAATTTCTAAGCAATGTCA+TGG - chr5_3:37111462-37111481 None:intergenic 30.0%
AACCAAAGACAAAATCTTGA+AGG + chr5_3:37111513-37111532 Msa0809800:intron 30.0%
TAATTCTCCTAAACTCATTG+AGG + chr5_3:37111705-37111724 Msa0809800:intron 30.0%
!! ATTGAGGCATTTTCTAAGTA+CGG + chr5_3:37111721-37111740 Msa0809800:intron 30.0%
! TGGTGTAATCACAATTTTCA+GGG + chr5_3:37111995-37112014 Msa0809800:intron 30.0%
AATGGAGAATAGATTGTGTA+GGG - chr5_3:37112109-37112128 None:intergenic 30.0%
TAATGGAGAATAGATTGTGT+AGG - chr5_3:37112110-37112129 None:intergenic 30.0%
!! TAATCCTAGCCTTATTCTAA+TGG - chr5_3:37112127-37112146 None:intergenic 30.0%
ATAAGGCTAGGATTATTTGA+TGG + chr5_3:37112132-37112151 Msa0809800:five_prime_UTR 30.0%
AATCCAACCAAACTGAAATA+TGG + chr5_3:37112156-37112175 Msa0809800:five_prime_UTR 30.0%
TTACCATATTTCAGTTTGGT+TGG - chr5_3:37112162-37112181 None:intergenic 30.0%
!! TGTTTTGAGCATACTCTATT+TGG - chr5_3:37112192-37112211 None:intergenic 30.0%
!!! GAATTTGTTGATTTTGGAAG+TGG - chr5_3:37112285-37112304 None:intergenic 30.0%
!!! GCTATGGAATTTGTTGATTT+TGG - chr5_3:37112291-37112310 None:intergenic 30.0%
ACAAATTCCATAGCAGTTAT+AGG + chr5_3:37112297-37112316 Msa0809800:five_prime_UTR 30.0%
!!! GTTGTTCTAGGAAACTATTT+TGG + chr5_3:37112345-37112364 Msa0809800:five_prime_UTR 30.0%
TAAGAACATTGTGTATCATC+CGG + chr5_3:37112416-37112435 Msa0809800:five_prime_UTR 30.0%
!! CACAAAAGTACCAAAATAAC+CGG - chr5_3:37112636-37112655 None:intergenic 30.0%
!!! GTTATTTTGGTACTTTTGTG+CGG + chr5_3:37112636-37112655 Msa0809800:five_prime_UTR 30.0%
! ACAAAATTGGAGGAATTTTG+TGG + chr5_3:37112701-37112720 Msa0809800:five_prime_UTR 30.0%
! CAAAATTGGAGGAATTTTGT+GGG + chr5_3:37112702-37112721 Msa0809800:five_prime_UTR 30.0%
AAAAATAAACCCACATAAGG+TGG + chr5_3:37112820-37112839 Msa0809800:intron 30.0%
!!! CATTTTTTTACCACCTTATG+TGG - chr5_3:37112833-37112852 None:intergenic 30.0%
CACATAAGGTGGTAAAAAAA+TGG + chr5_3:37112831-37112850 Msa0809800:intron 30.0%
! AGGTGGTAAAAAAATGGATT+TGG + chr5_3:37112837-37112856 Msa0809800:intron 30.0%
ATTTAATCACTACAATGCAG+GGG + chr5_3:37113247-37113266 Msa0809800:intron 30.0%
AGGAATAATTTGAGTAGCTT+AGG - chr5_3:37113418-37113437 None:intergenic 30.0%
!! ACTCTGAAACAAGTTTGTAA+CGG - chr5_3:37113523-37113542 None:intergenic 30.0%
! TACAAACTTGTTTCAGAGTT+AGG + chr5_3:37113524-37113543 Msa0809800:CDS 30.0%
ATGTCCATTTCTGTAACATT+GGG + chr5_3:37113566-37113585 Msa0809800:CDS 30.0%
AATTCCCAATGTTACAGAAA+TGG - chr5_3:37113573-37113592 None:intergenic 30.0%
ACATTGGGAATTACAAATAC+TGG + chr5_3:37113581-37113600 Msa0809800:CDS 30.0%
TTTCCATTTCTACCTTTCTT+TGG - chr5_3:37113647-37113666 None:intergenic 30.0%
! ATTTGAAGTAAGTGTTTGTG+AGG + chr5_3:37113733-37113752 Msa0809800:CDS 30.0%
GATCTTAGTATAGCAAATGA+GGG + chr5_3:37113755-37113774 Msa0809800:CDS 30.0%
AGGTGATTATTTATTAGCTG+TGG + chr5_3:37113799-37113818 Msa0809800:CDS 30.0%
GGTGATTATTTATTAGCTGT+GGG + chr5_3:37113800-37113819 Msa0809800:CDS 30.0%
ATTGAAGTTATTTGTTCCAC+TGG + chr5_3:37113914-37113933 Msa0809800:three_prime_UTR 30.0%
! TGTTTATGTTCTAAGTGCAT+TGG + chr5_3:37114062-37114081 Msa0809800:three_prime_UTR 30.0%
GAGATGAAAGTAATGGTGAT+AGG - chr5_3:37108041-37108060 None:intergenic 35.0%
! ATAGGATTTTGTAAGAGGGT+TGG - chr5_3:37108144-37108163 None:intergenic 35.0%
! GTTGAGATTGCAGAAAGTAT+AGG - chr5_3:37108162-37108181 None:intergenic 35.0%
TAGCTCTTTCAATGATGGTA+AGG - chr5_3:37108184-37108203 None:intergenic 35.0%
!! GTGTTTAGCTCTTTCAATGA+TGG - chr5_3:37108189-37108208 None:intergenic 35.0%
GGTAAAGGGATAAGATTGAA+TGG + chr5_3:37108335-37108354 Msa0809800:five_prime_UTR 35.0%
AATCAAAAGAAGCAGCAATG+AGG - chr5_3:37108403-37108422 None:intergenic 35.0%
TTGATTCCAAACTTTGGTAC+AGG + chr5_3:37108417-37108436 Msa0809800:five_prime_UTR 35.0%
!! CTCTAAAGTCACGAACAAAT+TGG - chr5_3:37108672-37108691 None:intergenic 35.0%
TATGGTGTTTCTTATGTGAG+AGG + chr5_3:37109236-37109255 Msa0809800:five_prime_UTR 35.0%
ATTAAGTTTCCCACCTTCAA+AGG - chr5_3:37109276-37109295 None:intergenic 35.0%
ACACTTTACTGCCTATGATT+TGG + chr5_3:37109328-37109347 Msa0809800:five_prime_UTR 35.0%
! CTGCCTATGATTTGGATAAT+TGG + chr5_3:37109336-37109355 Msa0809800:five_prime_UTR 35.0%
TTTGGATAATTGGAAAGGTG+TGG + chr5_3:37109346-37109365 Msa0809800:five_prime_UTR 35.0%
! TTAGGTCACTTTGCAAGATT+TGG + chr5_3:37109748-37109767 Msa0809800:intron 35.0%
TGTATGCAACTATGAAATGG+GGG - chr5_3:37109788-37109807 None:intergenic 35.0%
ATAGTTGCATACAACAAGGA+CGG + chr5_3:37109795-37109814 Msa0809800:five_prime_UTR 35.0%
!! CACATTCACATTTTGGTGAA+TGG - chr5_3:37110219-37110238 None:intergenic 35.0%
CTTCAAAATGACAACGTGAA+TGG + chr5_3:37110637-37110656 Msa0809800:intron 35.0%
GGGGACTCAAATAAAAATGT+GGG - chr5_3:37110928-37110947 None:intergenic 35.0%
TGGGGACTCAAATAAAAATG+TGG - chr5_3:37110929-37110948 None:intergenic 35.0%
CAATGACATGAAGATATGTG+GGG - chr5_3:37110947-37110966 None:intergenic 35.0%
TACTGTTGGACTTAGTGTAA+AGG + chr5_3:37111022-37111041 Msa0809800:intron 35.0%
TTTCTCTCTCTCATTGTTGT+GGG - chr5_3:37111133-37111152 None:intergenic 35.0%
! TTTTCTCTCTCTCATTGTTG+TGG - chr5_3:37111134-37111153 None:intergenic 35.0%
GAAAGAAATTGGCAATGCTT+TGG + chr5_3:37111173-37111192 Msa0809800:intron 35.0%
! GACCTTCAAGATTTTGTCTT+TGG - chr5_3:37111518-37111537 None:intergenic 35.0%
!!! TCGCTTTTCTAAGGTATTGT+CGG - chr5_3:37111562-37111581 None:intergenic 35.0%
AATACCTTAGAAAAGCGATG+AGG + chr5_3:37111564-37111583 Msa0809800:intron 35.0%
GAAAATGCCTCAATGAGTTT+AGG - chr5_3:37111715-37111734 None:intergenic 35.0%
TGTGTGAATGAATCTTGTTC+CGG - chr5_3:37111799-37111818 None:intergenic 35.0%
! CTGGTGTAATCACAATTTTC+AGG + chr5_3:37111994-37112013 Msa0809800:intron 35.0%
!! GTAATCACAATTTTCAGGGA+TGG + chr5_3:37111999-37112018 Msa0809800:intron 35.0%
!! CTTTTGTAACACTGCTGATT+TGG - chr5_3:37112058-37112077 None:intergenic 35.0%
TTCTCCATTAGAATAAGGCT+AGG + chr5_3:37112120-37112139 Msa0809800:five_prime_UTR 35.0%
GTGATGAAGAATTGGCATTT+GGG - chr5_3:37112323-37112342 None:intergenic 35.0%
TGTGATGAAGAATTGGCATT+TGG - chr5_3:37112324-37112343 None:intergenic 35.0%
AAATGCCAATTCTTCATCAC+AGG + chr5_3:37112323-37112342 Msa0809800:five_prime_UTR 35.0%
AACAACCTGTGATGAAGAAT+TGG - chr5_3:37112331-37112350 None:intergenic 35.0%
GTGTTACCAAATTACATGGA+CGG - chr5_3:37112371-37112390 None:intergenic 35.0%
AAGAACATTGTGTATCATCC+GGG + chr5_3:37112417-37112436 Msa0809800:five_prime_UTR 35.0%
!! TATTGTGTTGGTTATGGGAT+TGG + chr5_3:37112512-37112531 Msa0809800:five_prime_UTR 35.0%
! TGTTAAAGCGTCTAAAAGAC+CGG + chr5_3:37112614-37112633 Msa0809800:five_prime_UTR 35.0%
! GTCTAAAAGACCGGTTATTT+TGG + chr5_3:37112623-37112642 Msa0809800:five_prime_UTR 35.0%
!! GCTAAGGTTGATGACAAAAT+TGG + chr5_3:37112688-37112707 Msa0809800:five_prime_UTR 35.0%
!! AAGGTTGATGACAAAATTGG+AGG + chr5_3:37112691-37112710 Msa0809800:five_prime_UTR 35.0%
CTTGATCACTCAATCTTGAT+CGG + chr5_3:37112926-37112945 Msa0809800:intron 35.0%
TTTAATCACTACAATGCAGG+GGG + chr5_3:37113248-37113267 Msa0809800:intron 35.0%
TTTGACGGAAATGAAGTTGT+AGG - chr5_3:37113438-37113457 None:intergenic 35.0%
!!! GTGAAGGTTGTTGTTTTTGA+CGG - chr5_3:37113453-37113472 None:intergenic 35.0%
CAATGTTACAGAAATGGACA+TGG - chr5_3:37113567-37113586 None:intergenic 35.0%
CATGTCCATTTCTGTAACAT+TGG + chr5_3:37113565-37113584 Msa0809800:CDS 35.0%
AAGCCAAAGAAAGGTAGAAA+TGG + chr5_3:37113641-37113660 Msa0809800:CDS 35.0%
GGATCTTAGTATAGCAAATG+AGG + chr5_3:37113754-37113773 Msa0809800:CDS 35.0%
AAATAAACTTGGTAGAGTCG+AGG - chr5_3:37113977-37113996 None:intergenic 35.0%
GAGGGAAGGATAAAAAGTGA+AGG - chr5_3:37108001-37108020 None:intergenic 40.0%
TTTATCCTTCCCTCTCAACA+TGG + chr5_3:37108007-37108026 Msa0809800:five_prime_UTR 40.0%
TTATCCTTCCCTCTCAACAT+GGG + chr5_3:37108008-37108027 Msa0809800:five_prime_UTR 40.0%
GTAAGTAACCCATGTTGAGA+GGG - chr5_3:37108019-37108038 None:intergenic 40.0%
TCGGTATACCTAGTTACCAA+TGG + chr5_3:37108279-37108298 Msa0809800:five_prime_UTR 40.0%
GTATACCTAGTTACCAATGG+TGG + chr5_3:37108282-37108301 Msa0809800:five_prime_UTR 40.0%
GCGTTGCAGATTATGGTAAA+GGG + chr5_3:37108321-37108340 Msa0809800:five_prime_UTR 40.0%
CAGCAATGAGGATAACTTGA+GGG - chr5_3:37108391-37108410 None:intergenic 40.0%
ACTGATCCTGTACCAAAGTT+TGG - chr5_3:37108426-37108445 None:intergenic 40.0%
ACTTTGGTACAGGATCAGTA+AGG + chr5_3:37108427-37108446 Msa0809800:five_prime_UTR 40.0%
ATTGTACACTGCTCTTGCTT+CGG - chr5_3:37109102-37109121 None:intergenic 40.0%
ACATATTTAGGGACCCAAGA+TGG + chr5_3:37109165-37109184 Msa0809800:five_prime_UTR 40.0%
CATATTTAGGGACCCAAGAT+GGG + chr5_3:37109166-37109185 Msa0809800:five_prime_UTR 40.0%
ATATTTAGGGACCCAAGATG+GGG + chr5_3:37109167-37109186 Msa0809800:five_prime_UTR 40.0%
TCTTATGTGAGAGGACTTCA+AGG + chr5_3:37109245-37109264 Msa0809800:five_prime_UTR 40.0%
CTTCAAGGAGATTCCTTTGA+AGG + chr5_3:37109260-37109279 Msa0809800:five_prime_UTR 40.0%
! AAGGAGATTCCTTTGAAGGT+GGG + chr5_3:37109264-37109283 Msa0809800:five_prime_UTR 40.0%
! AGTTTGGAACTCCATTGACA+CGG - chr5_3:37109847-37109866 None:intergenic 40.0%
!!! CCATTTTTTCCTTGCCGTAT+TGG - chr5_3:37109891-37109910 None:intergenic 40.0%
CCAATACGGCAAGGAAAAAA+TGG + chr5_3:37109888-37109907 Msa0809800:five_prime_UTR 40.0%
GGCTGTCAATATACTTCCAA+TGG + chr5_3:37110658-37110677 Msa0809800:intron 40.0%
!! GTGGGGTGTCATTCATTAAT+TGG - chr5_3:37111115-37111134 None:intergenic 40.0%
TTCTCTCTCTCATTGTTGTG+GGG - chr5_3:37111132-37111151 None:intergenic 40.0%
! AAAGGCATGTCCATGAGTTA+AGG - chr5_3:37111492-37111511 None:intergenic 40.0%
!! TTCTAAGGTATTGTCGGCTT+TGG - chr5_3:37111556-37111575 None:intergenic 40.0%
ATCGACACTAATGAGCTAAG+TGG - chr5_3:37111643-37111662 None:intergenic 40.0%
ACACCAGCAGTAAATTGTCA+CGG - chr5_3:37111981-37112000 None:intergenic 40.0%
AGAATAGATTGTGTAGGGCA+CGG - chr5_3:37112104-37112123 None:intergenic 40.0%
!! CAGCTTCTAGAGCTATGTTT+AGG - chr5_3:37112218-37112237 None:intergenic 40.0%
ATTTGGGCCTATAACTGCTA+TGG - chr5_3:37112307-37112326 None:intergenic 40.0%
TCTTCATCACAGGTTGTTCT+AGG + chr5_3:37112333-37112352 Msa0809800:five_prime_UTR 40.0%
! TTTTGGCCGTCCATGTAATT+TGG + chr5_3:37112362-37112381 Msa0809800:five_prime_UTR 40.0%
CTTTAGCAACTTGAACTGCT+TGG - chr5_3:37112482-37112501 None:intergenic 40.0%
GATCAAAGTCAAGAGAGTGA+AGG + chr5_3:37112534-37112553 Msa0809800:five_prime_UTR 40.0%
!! ATTTTGGTACTTTTGTGCGG+TGG + chr5_3:37112639-37112658 Msa0809800:five_prime_UTR 40.0%
! TTTTGGTACTTTTGTGCGGT+GGG + chr5_3:37112640-37112659 Msa0809800:five_prime_UTR 40.0%
GCGTAGATGAAAACTTACCA+GGG - chr5_3:37112789-37112808 None:intergenic 40.0%
AGCGTAGATGAAAACTTACC+AGG - chr5_3:37112790-37112809 None:intergenic 40.0%
! GATTTGGAATGTGTGCAATG+TGG + chr5_3:37112853-37112872 Msa0809800:intron 40.0%
TTGCTTACTGCATGCTATCA+CGG + chr5_3:37112961-37112980 Msa0809800:intron 40.0%
TGATCGCAGTGTGACTAAAA+AGG + chr5_3:37113104-37113123 Msa0809800:intron 40.0%
GATCGCAGTGTGACTAAAAA+GGG + chr5_3:37113105-37113124 Msa0809800:intron 40.0%
TTAATCACTACAATGCAGGG+GGG + chr5_3:37113249-37113268 Msa0809800:intron 40.0%
!! TCTTTTGGGTACCATGTCAT+TGG - chr5_3:37113281-37113300 None:intergenic 40.0%
CTCATTCTCATGTCTGTCAT+TGG - chr5_3:37113317-37113336 None:intergenic 40.0%
! TGGTTGATTGGTTGATGTGA+AGG - chr5_3:37113469-37113488 None:intergenic 40.0%
GTATCGAATGAGTGGTTGAT+TGG - chr5_3:37113481-37113500 None:intergenic 40.0%
!!! GTTTTCGAGTATCGAATGAG+TGG - chr5_3:37113489-37113508 None:intergenic 40.0%
ACAAATACTGGAAGAATGGC+TGG + chr5_3:37113593-37113612 Msa0809800:CDS 40.0%
CAAATACTGGAAGAATGGCT+GGG + chr5_3:37113594-37113613 Msa0809800:CDS 40.0%
CTGTTTGTGAAGCCAAAGAA+AGG + chr5_3:37113632-37113651 Msa0809800:CDS 40.0%
TGGAAATCCAGTGAAACAGT+TGG + chr5_3:37113661-37113680 Msa0809800:CDS 40.0%
AAATCCAGTGAAACAGTTGG+TGG + chr5_3:37113664-37113683 Msa0809800:CDS 40.0%
AATCCAGTGAAACAGTTGGT+GGG + chr5_3:37113665-37113684 Msa0809800:CDS 40.0%
CTTAGTATAGCAAATGAGGG+TGG + chr5_3:37113758-37113777 Msa0809800:CDS 40.0%
GGTGTTAAGGTGATTGAAGA+AGG + chr5_3:37113779-37113798 Msa0809800:CDS 40.0%
!!! GAATTTTGGGGTAAGAGAGA+GGG - chr5_3:37114022-37114041 None:intergenic 40.0%
!!! AGAATTTTGGGGTAAGAGAG+AGG - chr5_3:37114023-37114042 None:intergenic 40.0%
GGTAAGTAACCCATGTTGAG+AGG - chr5_3:37108020-37108039 None:intergenic 45.0%
!! GGGTACATGAGTTGGTGAAT+CGG - chr5_3:37108102-37108121 None:intergenic 45.0%
! GGATTTTGTAAGAGGGTTGG+TGG - chr5_3:37108141-37108160 None:intergenic 45.0%
GAGCTAAACACATCGTGTCA+CGG + chr5_3:37108198-37108217 Msa0809800:five_prime_UTR 45.0%
TAACTAGGTATACCGAGTCG+AGG - chr5_3:37108275-37108294 None:intergenic 45.0%
! TCACTCCACCATTGGTAACT+AGG - chr5_3:37108290-37108309 None:intergenic 45.0%
GGCGTTGCAGATTATGGTAA+AGG + chr5_3:37108320-37108339 Msa0809800:five_prime_UTR 45.0%
GCAGCAATGAGGATAACTTG+AGG - chr5_3:37108392-37108411 None:intergenic 45.0%
TGTGTGTGTGTGAAGGTGAT+TGG + chr5_3:37109074-37109093 Msa0809800:intron 45.0%
TACAATGCTGGACAAGCAGA+AGG + chr5_3:37109116-37109135 Msa0809800:five_prime_UTR 45.0%
ACAATGCTGGACAAGCAGAA+GGG + chr5_3:37109117-37109136 Msa0809800:five_prime_UTR 45.0%
! AAGCAGAAGGGATGACGTTT+TGG + chr5_3:37109129-37109148 Msa0809800:five_prime_UTR 45.0%
! AGCAGAAGGGATGACGTTTT+GGG + chr5_3:37109130-37109149 Msa0809800:five_prime_UTR 45.0%
! CAAGGAGATTCCTTTGAAGG+TGG + chr5_3:37109263-37109282 Msa0809800:five_prime_UTR 45.0%
! GGTCACTTTGCAAGATTTGG+AGG + chr5_3:37109751-37109770 Msa0809800:intron 45.0%
ATACAACAAGGACGGTCTAG+TGG + chr5_3:37109803-37109822 Msa0809800:five_prime_UTR 45.0%
TGTGCTTACAACCGTGTCAA+TGG + chr5_3:37109833-37109852 Msa0809800:five_prime_UTR 45.0%
!! AGGTTATGCAAAAGCACCTG+AGG + chr5_3:37110323-37110342 Msa0809800:five_prime_UTR 45.0%
GTAGCAGATGTACTTCAAGC+TGG + chr5_3:37110351-37110370 Msa0809800:five_prime_UTR 45.0%
GGAAAATTCTTGGGTGGTCT+TGG + chr5_3:37111064-37111083 Msa0809800:intron 45.0%
CAAGGAGACGAGATAGTCTT+AGG - chr5_3:37111238-37111257 None:intergenic 45.0%
! GGTTGTACTGGCACAAATTG+TGG - chr5_3:37111270-37111289 None:intergenic 45.0%
TGAGCACTCTCCTTAACTCA+TGG + chr5_3:37111479-37111498 Msa0809800:intron 45.0%
CCTTAGAAAAGCGATGAGGA+CGG + chr5_3:37111568-37111587 Msa0809800:intron 45.0%
CACGCAAACAAACTTGAGTC+CGG + chr5_3:37111777-37111796 Msa0809800:intron 45.0%
GAACCGTGACAATTTACTGC+TGG + chr5_3:37111975-37111994 Msa0809800:intron 45.0%
!! GCACGGTCGATTTGAGATAT+TGG - chr5_3:37112087-37112106 None:intergenic 45.0%
TATCATCCGGGATGTAGTGA+TGG + chr5_3:37112429-37112448 Msa0809800:five_prime_UTR 45.0%
TTCGTTCCATCACTACATCC+CGG - chr5_3:37112438-37112457 None:intergenic 45.0%
AGAGATGACTTAGAGTTGCC+AGG + chr5_3:37112564-37112583 Msa0809800:five_prime_UTR 45.0%
GAGATGACTTAGAGTTGCCA+GGG + chr5_3:37112565-37112584 Msa0809800:five_prime_UTR 45.0%
! ATAAGTTCCTGTTGCTTCCC+TGG - chr5_3:37112585-37112604 None:intergenic 45.0%
! ATTGGAGGAATTTTGTGGGC+TGG + chr5_3:37112706-37112725 Msa0809800:five_prime_UTR 45.0%
!!! ATTTTGTGGGCTGGTTATCC+TGG + chr5_3:37112715-37112734 Msa0809800:five_prime_UTR 45.0%
! GTGTTTGGTGACTATAACCC+TGG + chr5_3:37112769-37112788 Msa0809800:CDS 45.0%
TCCAGATCTCAAGATGTGAC+TGG - chr5_3:37112889-37112908 None:intergenic 45.0%
ATTTGACATGGCTGCAATCG+TGG - chr5_3:37113054-37113073 None:intergenic 45.0%
ATGAGAGCTGATCCATCATC+AGG + chr5_3:37113332-37113351 Msa0809800:CDS 45.0%
TAGAAACGGTAGGTTCTACC+AGG - chr5_3:37113362-37113381 None:intergenic 45.0%
AGAACCTACCGTTTCTACAC+AGG + chr5_3:37113365-37113384 Msa0809800:CDS 45.0%
CCTTTGGACCTGTGTAGAAA+CGG - chr5_3:37113376-37113395 None:intergenic 45.0%
GGTCCAAAGGTCTACGAATT+CGG + chr5_3:37113386-37113405 Msa0809800:CDS 45.0%
TAGCCGAATTCGTAGACCTT+TGG - chr5_3:37113392-37113411 None:intergenic 45.0%
AAGGTCTACGAATTCGGCTA+TGG + chr5_3:37113392-37113411 Msa0809800:CDS 45.0%
! ATCCAGTGAAACAGTTGGTG+GGG + chr5_3:37113666-37113685 Msa0809800:CDS 45.0%
! AGCAAATGAGGGTGGTGTTA+AGG + chr5_3:37113766-37113785 Msa0809800:CDS 45.0%
GAAAAAAAGAGGCAAGCCAG+TGG - chr5_3:37113933-37113952 None:intergenic 45.0%
TGGTAGAGTCGAGGATTGAA+AGG - chr5_3:37113968-37113987 None:intergenic 45.0%
!!! TAATTAAAATCAATTTTTTT+AGG - chr5_3:37111291-37111310 None:intergenic 5.0%
GTAACCCATGTTGAGAGGGA+AGG - chr5_3:37108015-37108034 None:intergenic 50.0%
GTGAATCGGCATGAACGAGT+TGG - chr5_3:37108088-37108107 None:intergenic 50.0%
! GAGTAAGGGGGTACATGAGT+TGG - chr5_3:37108110-37108129 None:intergenic 50.0%
!! TGGTGGTGTCACAGGAGTAA+GGG - chr5_3:37108124-37108143 None:intergenic 50.0%
!! TTGGTGGTGTCACAGGAGTA+AGG - chr5_3:37108125-37108144 None:intergenic 50.0%
CATCGTGTCACGGCTTACAT+TGG + chr5_3:37108208-37108227 Msa0809800:five_prime_UTR 50.0%
ATACCGAGTCGAGGAATAGG+TGG - chr5_3:37108266-37108285 None:intergenic 50.0%
GGTATACCGAGTCGAGGAAT+AGG - chr5_3:37108269-37108288 None:intergenic 50.0%
TTGCACGGCGTTGCAGATTA+TGG + chr5_3:37108314-37108333 Msa0809800:five_prime_UTR 50.0%
TATGGGGTGTGTGTGTGTGA+AGG + chr5_3:37109067-37109086 Msa0809800:intron 50.0%
GCAAGAGCAGTGTACAATGC+TGG + chr5_3:37109104-37109123 Msa0809800:five_prime_UTR 50.0%
ACATCTGCTACAGCATCCTC+AGG - chr5_3:37110342-37110361 None:intergenic 50.0%
! GGAGACGAGATAGTCTTAGG+TGG - chr5_3:37111235-37111254 None:intergenic 50.0%
!! CCGTCCTCATCGCTTTTCTA+AGG - chr5_3:37111571-37111590 None:intergenic 50.0%
GGAACGTTGACGCTAGAATG+AGG + chr5_3:37111589-37111608 Msa0809800:intron 50.0%
TCAACACTCGTGTGTGGCTT+AGG - chr5_3:37111616-37111635 None:intergenic 50.0%
TCAGGGATGGATGTAGAGTG+TGG + chr5_3:37112012-37112031 Msa0809800:intron 50.0%
!! GCTCTAGAAGCTGCAAGAAG+CGG + chr5_3:37112225-37112244 Msa0809800:five_prime_UTR 50.0%
!! TTTTGGAAGTGGGAGAGTCG+AGG - chr5_3:37112274-37112293 None:intergenic 50.0%
GCTGGTTATCCTGGTGAACT+TGG + chr5_3:37112724-37112743 Msa0809800:five_prime_UTR 50.0%
GGTTATCCTGGTGAACTTGG+TGG + chr5_3:37112727-37112746 Msa0809800:five_prime_UTR 50.0%
! TCCTGGTGAACTTGGTGGAA+TGG + chr5_3:37112732-37112751 Msa0809800:exon 50.0%
! GCTCTTGCTCAGGTTGTGTT+TGG + chr5_3:37112754-37112773 Msa0809800:CDS 50.0%
GCCAGTCACATCTTGAGATC+TGG + chr5_3:37112885-37112904 Msa0809800:intron 50.0%
GGGGGAGATTACCAATGACA+TGG + chr5_3:37113267-37113286 Msa0809800:CDS 50.0%
GATCCATCATCAGGCTATCC+TGG + chr5_3:37113341-37113360 Msa0809800:CDS 50.0%
CTACCAGGATAGCCTGATGA+TGG - chr5_3:37113347-37113366 None:intergenic 50.0%
TGGACCTGTGTAGAAACGGT+AGG - chr5_3:37113372-37113391 None:intergenic 50.0%
CCGTTTCTACACAGGTCCAA+AGG + chr5_3:37113373-37113392 Msa0809800:CDS 50.0%
GGCTTCACAAACAGCAACAC+AGG - chr5_3:37113626-37113645 None:intergenic 50.0%
AACCCCACCAACTGTTTCAC+TGG - chr5_3:37113671-37113690 None:intergenic 50.0%
!! GTGGTGTCACAGGAGTAAGG+GGG - chr5_3:37108122-37108141 None:intergenic 55.0%
!! GGTGGTGTCACAGGAGTAAG+GGG - chr5_3:37108123-37108142 None:intergenic 55.0%
!! AAGAGGGTTGGTGGTGTCAC+AGG - chr5_3:37108132-37108151 None:intergenic 55.0%
GCTCCACCTATTCCTCGACT+CGG + chr5_3:37108260-37108279 Msa0809800:five_prime_UTR 55.0%
GCAACGCTTCACTCCACCAT+TGG - chr5_3:37108298-37108317 None:intergenic 55.0%
!! TGGTGGAGTGAAGCGTTGCA+CGG + chr5_3:37108299-37108318 Msa0809800:five_prime_UTR 55.0%
CTTGCCCTCTTCCCCATCTT+GGG - chr5_3:37109181-37109200 None:intergenic 55.0%
TCTTGCCCTCTTCCCCATCT+TGG - chr5_3:37109182-37109201 None:intergenic 55.0%
GACAGCTGGTGAAGACCCTT+TGG + chr5_3:37109202-37109221 Msa0809800:five_prime_UTR 55.0%
GGCTTGTCAACACTCGTGTG+TGG - chr5_3:37111622-37111641 None:intergenic 55.0%
AGAGTTGCCAGGGAAGCAAC+AGG + chr5_3:37112575-37112594 Msa0809800:five_prime_UTR 55.0%
! TGGTACTTTTGTGCGGTGGG+CGG + chr5_3:37112643-37112662 Msa0809800:five_prime_UTR 55.0%
GCCATTCCACCAAGTTCACC+AGG - chr5_3:37112736-37112755 None:intergenic 55.0%
TGGTGGAATGGCTCTTGCTC+AGG + chr5_3:37112744-37112763 Msa0809800:exon 55.0%
! GGTGGGGTTTGAGAGTGTGA+AGG + chr5_3:37113682-37113701 Msa0809800:CDS 55.0%
! GGGGTTTGAGAGTGTGAAGG+TGG + chr5_3:37113685-37113704 Msa0809800:CDS 55.0%
! GAGAGTGTGAAGGTGGAAGC+AGG + chr5_3:37113692-37113711 Msa0809800:CDS 55.0%
! GGAGAGGGAGGGTATGAAGA+AGG - chr5_3:37114001-37114020 None:intergenic 55.0%
GTAAGAGAGAGGGAGAGGGA+GGG - chr5_3:37114012-37114031 None:intergenic 55.0%
TGGGGTAAGAGAGAGGGAGA+GGG - chr5_3:37114016-37114035 None:intergenic 55.0%
TTGGGGTAAGAGAGAGGGAG+AGG - chr5_3:37114017-37114036 None:intergenic 55.0%
AGGGACCCAAGATGGGGAAG+AGG + chr5_3:37109173-37109192 Msa0809800:five_prime_UTR 60.0%
GGGACCCAAGATGGGGAAGA+GGG + chr5_3:37109174-37109193 Msa0809800:five_prime_UTR 60.0%
GGAAGAGGGCAAGAGACAGC+TGG + chr5_3:37109188-37109207 Msa0809800:five_prime_UTR 60.0%
! TACTTTTGTGCGGTGGGCGG+TGG + chr5_3:37112646-37112665 Msa0809800:five_prime_UTR 60.0%
GTGTGCAATGTGGCTGCACG+CGG + chr5_3:37112863-37112882 Msa0809800:intron 60.0%
GCAGGTGAAACGCGCGAAGT+TGG + chr5_3:37113710-37113729 Msa0809800:CDS 60.0%
GGTAAGAGAGAGGGAGAGGG+AGG - chr5_3:37114013-37114032 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 37107991 37114102 37107991 ID=Msa0809800;Name=Msa0809800
chr5_3 mRNA 37107991 37114102 37107991 ID=Msa0809800-mRNA-1;Parent=Msa0809800;Name=Msa0809800-mRNA-1;_AED=0.03;_eAED=0.03;_QI=1771|1|1|1|0.6|0.5|6|246|209
chr5_3 exon 37107991 37108448 37107991 ID=Msa0809800-mRNA-1:exon:11508;Parent=Msa0809800-mRNA-1
chr5_3 exon 37109089 37109391 37109089 ID=Msa0809800-mRNA-1:exon:11509;Parent=Msa0809800-mRNA-1
chr5_3 exon 37109752 37109921 37109752 ID=Msa0809800-mRNA-1:exon:11510;Parent=Msa0809800-mRNA-1
chr5_3 exon 37110268 37110372 37110268 ID=Msa0809800-mRNA-1:exon:11511;Parent=Msa0809800-mRNA-1
chr5_3 exon 37112016 37112790 37112016 ID=Msa0809800-mRNA-1:exon:11512;Parent=Msa0809800-mRNA-1
chr5_3 exon 37113267 37114102 37113267 ID=Msa0809800-mRNA-1:exon:11513;Parent=Msa0809800-mRNA-1
chr5_3 five_prime_UTR 37107991 37108448 37107991 ID=Msa0809800-mRNA-1:five_prime_utr;Parent=Msa0809800-mRNA-1
chr5_3 five_prime_UTR 37109089 37109391 37109089 ID=Msa0809800-mRNA-1:five_prime_utr;Parent=Msa0809800-mRNA-1
chr5_3 five_prime_UTR 37109752 37109921 37109752 ID=Msa0809800-mRNA-1:five_prime_utr;Parent=Msa0809800-mRNA-1
chr5_3 five_prime_UTR 37110268 37110372 37110268 ID=Msa0809800-mRNA-1:five_prime_utr;Parent=Msa0809800-mRNA-1
chr5_3 five_prime_UTR 37112016 37112750 37112016 ID=Msa0809800-mRNA-1:five_prime_utr;Parent=Msa0809800-mRNA-1
chr5_3 CDS 37112751 37112790 37112751 ID=Msa0809800-mRNA-1:cds;Parent=Msa0809800-mRNA-1
chr5_3 CDS 37113267 37113856 37113267 ID=Msa0809800-mRNA-1:cds;Parent=Msa0809800-mRNA-1
chr5_3 three_prime_UTR 37113857 37114102 37113857 ID=Msa0809800-mRNA-1:three_prime_utr;Parent=Msa0809800-mRNA-1
Gene Sequence

>Msa0809800

ATGGCTCTTGCTCAGGTTGTGTTTGGTGACTATAACCCTGGGGGGAGATTACCAATGACATGGTACCCAAAAGATTTCATCAAAATACCAATGACAGACATGAGAATGAGAGCTGATCCATCATCAGGCTATCCTGGTAGAACCTACCGTTTCTACACAGGTCCAAAGGTCTACGAATTCGGCTATGGCCTAAGCTACTCAAATTATTCCTACAACTTCATTTCCGTCAAAAACAACAACCTTCACATCAACCAATCAACCACTCATTCGATACTCGAAAACTCTGAAACAATCCGTTACAAACTTGTTTCAGAGTTAGGCAAAAAAGCATGTAAAACCATGTCCATTTCTGTAACATTGGGAATTACAAATACTGGAAGAATGGCTGGGAAACATCCTGTGTTGCTGTTTGTGAAGCCAAAGAAAGGTAGAAATGGAAATCCAGTGAAACAGTTGGTGGGGTTTGAGAGTGTGAAGGTGGAAGCAGGTGAAACGCGCGAAGTTGGATTTGAAGTAAGTGTTTGTGAGGATCTTAGTATAGCAAATGAGGGTGGTGTTAAGGTGATTGAAGAAGGTGATTATTTATTAGCTGTGGGAGAAGAACAATACACAATAAATATTGGTGTTTGA
Protein sequence

>Msa0809800

MALAQVVFGDYNPGGRLPMTWYPKDFIKIPMTDMRMRADPSSGYPGRTYRFYTGPKVYEFGYGLSYSNYSYNFISVKNNNLHINQSTTHSILENSETIRYKLVSELGKKACKTMSISVTLGITNTGRMAGKHPVLLFVKPKKGRNGNPVKQLVGFESVKVEAGETREVGFEVSVCEDLSIANEGGVKVIEEGDYLLAVGEEQYTINIGV*