AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0812590

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0812590 MtrunA17_Chr4g0069891 80.808 99 11 2 1 97 41 133 2.84e-41 146
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 60 sgRNAs with CRISPR-Local

Find 337 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCTCAAAGTTAGTGAAAT+TGG 0.151550 5_3:+42738774 Msa0812590:CDS
AGTGGATTGGCGCAGTATTT+TGG 0.214986 5_3:-42744726 None:intergenic
GCACTCATTGCTATAGTTAT+AGG 0.234654 5_3:-42745011 None:intergenic
TTCAGAAAAGGTAGTGAAAT+TGG 0.266883 5_3:+42738686 Msa0812590:CDS
TAAACTTTGAGAAGGTCTTT+AGG 0.270077 5_3:-42738807 None:intergenic
AACATATTTAATTCTAGATT+TGG 0.270850 5_3:-42744974 None:intergenic
GCATATTCAACATATTTCTT+TGG 0.279796 5_3:-42744504 None:intergenic
CACGATAAGGGCATCCTTAC+CGG 0.286051 5_3:+42740218 Msa0812590:CDS
TATCAATGGTCTTTCTATAA+TGG 0.292159 5_3:+42742646 Msa0812590:three_prime_UTR
AAACTTTGAGAAGGTCTTTA+GGG 0.301540 5_3:-42738806 None:intergenic
CTAGAATTAAATATGTTAAT+AGG 0.334859 5_3:+42744980 Msa0812590:three_prime_UTR
ACCACAAAATACAGTCCTTT+TGG 0.347901 5_3:+42738603 Msa0812590:CDS
GGTCTTTCTATAATGGTGAT+TGG 0.353139 5_3:+42742653 Msa0812590:three_prime_UTR
GCCTGTCAGAAATGGAGTTT+TGG 0.354471 5_3:-42740118 None:intergenic
CGACCATTGCATGCAGATAT+CGG 0.371479 5_3:+42740296 Msa0812590:CDS
AACTATTCTATTTCACGATA+AGG 0.378450 5_3:+42740205 Msa0812590:CDS
ACTATTCTATTTCACGATAA+GGG 0.378728 5_3:+42740206 Msa0812590:CDS
AGTACGACGGCTGCGACTTC+CGG 0.392992 5_3:-42740252 None:intergenic
GAAAACAAAGTGGAAGGAAA+TGG 0.413731 5_3:+42744552 Msa0812590:three_prime_UTR
CGGTAGTGTCTTCGGTTTGA+CGG 0.413971 5_3:-42738638 None:intergenic
ACCACTAGCGGTAGTGTCTT+CGG 0.428113 5_3:-42738646 None:intergenic
ATTTCTATAACTGATTTGAA+TGG 0.435359 5_3:+42741518 Msa0812590:three_prime_UTR
AGCTTGGAGCCTGTCAGAAA+TGG 0.437288 5_3:-42740126 None:intergenic
TTTCAGAAACAATGGAAGAA+AGG 0.444356 5_3:+42742561 Msa0812590:intron
AAGAAATATGTTGAATATGC+AGG 0.454318 5_3:+42744507 Msa0812590:three_prime_UTR
TCTTAACAAAGCAGTGGAAA+AGG 0.466657 5_3:+42738749 Msa0812590:CDS
TGTTCTTGTAAAGTTATCAA+TGG 0.469950 5_3:+42742632 Msa0812590:three_prime_UTR
GGAAGGAAATGGAGGATGAA+TGG 0.471182 5_3:+42744563 Msa0812590:three_prime_UTR
TCTTAAAACTGTAGAGGATG+AGG 0.481757 5_3:+42738830 Msa0812590:CDS
AATATGCAGGAAAAGAGATC+TGG 0.504376 5_3:+42744520 Msa0812590:three_prime_UTR
GATAGTGCCTGCATCAACTA+AGG 0.512638 5_3:+42741449 Msa0812590:three_prime_UTR
CGATTAAGCTTGTCGTCGAA+TGG 0.515402 5_3:+42741473 Msa0812590:three_prime_UTR
CGGTACGGTGGTCACCGGTA+AGG 0.517885 5_3:-42740232 None:intergenic
CAACTCCGCTGAAAATAGCT+TGG 0.521336 5_3:-42740142 None:intergenic
TTAAAGAGTGGAGCGTCTCT+AGG 0.521479 5_3:+42744639 Msa0812590:three_prime_UTR
ACATGTTGCACATTCAGAAA+AGG 0.523714 5_3:+42738674 Msa0812590:CDS
TAATCGACCTTAGTTGATGC+AGG 0.525055 5_3:-42741456 None:intergenic
TCCAAAACTCCATTTCTGAC+AGG 0.526759 5_3:+42740117 Msa0812590:CDS
CGGCTACCACCACCACCAAA+AGG 0.530083 5_3:-42738618 None:intergenic
TCTCTGCTCATCAAGTGGAT+TGG 0.538315 5_3:-42744739 None:intergenic
TTAAACAGTTTCACTAACAA+TGG 0.538758 5_3:+42742603 Msa0812590:three_prime_UTR
TTAACCAAACTGTTCAAGTC+AGG 0.546329 5_3:-42738876 None:intergenic
ATCAATGAAAACAAAGTGGA+AGG 0.551225 5_3:+42744546 Msa0812590:three_prime_UTR
GACGGCTGCGACTTCCGGTA+CGG 0.556464 5_3:-42740247 None:intergenic
GTGCATCTCTGCTCATCAAG+TGG 0.557810 5_3:-42744744 None:intergenic
AACAAAGTGGAAGGAAATGG+AGG 0.575929 5_3:+42744555 Msa0812590:three_prime_UTR
ACTTCCGGTACGGTGGTCAC+CGG 0.587639 5_3:-42740237 None:intergenic
TGGTCGCAAGTCACGATCAG+AGG 0.597584 5_3:-42740279 None:intergenic
ACCGAAGACACTACCGCTAG+TGG 0.600468 5_3:+42738645 Msa0812590:CDS
AGTTTATCTTAAAACTGTAG+AGG 0.606052 5_3:+42738824 Msa0812590:CDS
ATATACACAGCTTAAACTAG+TGG 0.606148 5_3:-42744600 None:intergenic
GCAAATCAATGAAAACAAAG+TGG 0.606430 5_3:+42744542 Msa0812590:three_prime_UTR
AGCAGAGAGCTCATATGATG+AGG 0.609573 5_3:-42740182 None:intergenic
CTTACCGGTGACCACCGTAC+CGG 0.617893 5_3:+42740233 Msa0812590:CDS
TTACCGATATCTGCATGCAA+TGG 0.634992 5_3:-42740299 None:intergenic
AGGACCTCTTAACAAAGCAG+TGG 0.659559 5_3:+42738743 Msa0812590:CDS
AACATGTTTGCTACCACTAG+CGG 0.660877 5_3:-42738658 None:intergenic
GGCTGCGACTTCCGGTACGG+TGG 0.672767 5_3:-42740244 None:intergenic
TCAACACTTTGAAAGTCACA+AGG 0.701200 5_3:-42741428 None:intergenic
GATCAGAGGAACAAGTACGA+CGG 0.767711 5_3:-42740265 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAAAAAAAAATTATGGA+AGG + chr5_3:42738941-42738960 Msa0812590:intron 10.0%
!!! TAGTTTTAAAAGTAATATTT+TGG - chr5_3:42739283-42739302 None:intergenic 10.0%
!!! AATATTTTGCTATATTTTTA+AGG - chr5_3:42739438-42739457 None:intergenic 10.0%
!! ATATTCATATTAACAAAAAT+TGG - chr5_3:42739537-42739556 None:intergenic 10.0%
!!! GAATAATTTGTAATAAAATT+AGG - chr5_3:42739740-42739759 None:intergenic 10.0%
!! TTACAATGAAATAAAAAAAA+GGG - chr5_3:42740626-42740645 None:intergenic 10.0%
!! TTTACAATGAAATAAAAAAA+AGG - chr5_3:42740627-42740646 None:intergenic 10.0%
!!! TTTTATTCTATATTTCAATT+TGG - chr5_3:42740711-42740730 None:intergenic 10.0%
!! ATAAACAAAATATAAACTAA+TGG - chr5_3:42740882-42740901 None:intergenic 10.0%
!!! TTTTTTTTTTTTTAAATTGG+TGG + chr5_3:42741221-42741240 Msa0812590:intron 10.0%
!!! TTAGCTTTAAATAATTTTAA+TGG + chr5_3:42742259-42742278 Msa0812590:intron 10.0%
!!! TAGCTTTAAATAATTTTAAT+GGG + chr5_3:42742260-42742279 Msa0812590:intron 10.0%
!!! TGTTTATTAATATTTTTTTG+TGG + chr5_3:42744668-42744687 Msa0812590:three_prime_UTR 10.0%
!!! CATTTTGAAACAAATTTTTT+TGG - chr5_3:42739180-42739199 None:intergenic 15.0%
!! AAATTATCCTTATTAACTAT+TGG - chr5_3:42739307-42739326 None:intergenic 15.0%
!! AATAGTTAATAAGGATAATT+TGG + chr5_3:42739306-42739325 Msa0812590:intron 15.0%
!!! ACAAAATAAAAAATTTTGTG+AGG - chr5_3:42739498-42739517 None:intergenic 15.0%
!!! ATTTTGTTTTTTGTTTCTAA+TGG + chr5_3:42739511-42739530 Msa0812590:intron 15.0%
!! TTAATATGAATATCAAGATT+AGG + chr5_3:42739544-42739563 Msa0812590:intron 15.0%
!! TCAAAATAAAAAAATTTGTG+AGG + chr5_3:42739654-42739673 Msa0812590:intron 15.0%
!!! ATATTTTTCCAATGTTAATT+TGG + chr5_3:42740397-42740416 Msa0812590:intron 15.0%
!!! ATATAAAGTCGTATTTTTTT+AGG + chr5_3:42740500-42740519 Msa0812590:intron 15.0%
!!! TATAAAGTCGTATTTTTTTA+GGG + chr5_3:42740501-42740520 Msa0812590:intron 15.0%
!! TAAAGAAAAAGTAAATGTTA+AGG + chr5_3:42740534-42740553 Msa0812590:intron 15.0%
!! TACAATGAAATAAAAAAAAG+GGG - chr5_3:42740625-42740644 None:intergenic 15.0%
!!! CAAGTTTAGAATTAAAAAAA+TGG - chr5_3:42740834-42740853 None:intergenic 15.0%
!! TTTATTTGTGCAAAAAAAAT+AGG + chr5_3:42740897-42740916 Msa0812590:intron 15.0%
!!! TAATATTTGAAACAAAACAA+CGG - chr5_3:42740990-42741009 None:intergenic 15.0%
!!! TTTAAAACAACTATAACTAT+AGG + chr5_3:42741149-42741168 Msa0812590:intron 15.0%
!!! TCTTTTTAAGTTTATTCTAA+AGG - chr5_3:42741826-42741845 None:intergenic 15.0%
!! CATTAATAAACCAAATATTA+TGG + chr5_3:42741905-42741924 Msa0812590:intron 15.0%
!! TTTCAAAAATAAGTAAATTC+AGG - chr5_3:42741952-42741971 None:intergenic 15.0%
!!! ATTTTTTTCTCTAAAATAGA+TGG + chr5_3:42742367-42742386 Msa0812590:intron 15.0%
!!! TTCTTTTTTGTATATTTGAA+AGG - chr5_3:42742485-42742504 None:intergenic 15.0%
!!! TTTAATTTGTTTATCTGAAT+GGG - chr5_3:42742941-42742960 None:intergenic 15.0%
!!! TTTTAATTTGTTTATCTGAA+TGG - chr5_3:42742942-42742961 None:intergenic 15.0%
!!! AATTAGTTTTAAGTATGATT+GGG - chr5_3:42743255-42743274 None:intergenic 15.0%
!!! AAATTAGTTTTAAGTATGAT+TGG - chr5_3:42743256-42743275 None:intergenic 15.0%
!!! TTTTGAAGCAAAAAATATAA+GGG - chr5_3:42743678-42743697 None:intergenic 15.0%
!! ATAAAATAAATCTAACTCAT+AGG - chr5_3:42743724-42743743 None:intergenic 15.0%
!!! TATGAGTTAGATTTATTTTA+TGG + chr5_3:42743723-42743742 Msa0812590:intron 15.0%
!! TTTGTGATTTATACATAAAT+TGG - chr5_3:42743767-42743786 None:intergenic 15.0%
!!! ATTAAAAGTGATAACTTTTT+TGG + chr5_3:42743907-42743926 Msa0812590:intron 15.0%
!!! TATTTTATTTGTTTAAAGAG+TGG + chr5_3:42744627-42744646 Msa0812590:three_prime_UTR 15.0%
!! AACATATTTAATTCTAGATT+TGG - chr5_3:42744977-42744996 None:intergenic 15.0%
!! CTAGAATTAAATATGTTAAT+AGG + chr5_3:42744980-42744999 Msa0812590:three_prime_UTR 15.0%
!!! TTTTAAGATAAACTTTGAGA+AGG - chr5_3:42738818-42738837 None:intergenic 20.0%
!! AAAAAATTATGGAAGGAATT+AGG + chr5_3:42738948-42738967 Msa0812590:intron 20.0%
!! AGAAAATGTTATTATTGCAT+TGG - chr5_3:42739220-42739239 None:intergenic 20.0%
!! AAACTAACCAATAGTTAATA+AGG + chr5_3:42739297-42739316 Msa0812590:intron 20.0%
!! AATGATTAAAAGAAAGAGAA+TGG - chr5_3:42739340-42739359 None:intergenic 20.0%
!!! TTTTGCTATATTTTTAAGGA+CGG - chr5_3:42739434-42739453 None:intergenic 20.0%
!!! ACATTCTGTTTAATTTTTCA+TGG - chr5_3:42739469-42739488 None:intergenic 20.0%
!!! ACACCTCATTTTATTTTATA+AGG + chr5_3:42739683-42739702 Msa0812590:intron 20.0%
!! ACTCCTTATAAAATAAAATG+AGG - chr5_3:42739689-42739708 None:intergenic 20.0%
!!! TACCAAAAATTTATTTTCGT+TGG + chr5_3:42739760-42739779 Msa0812590:intron 20.0%
!! CAAAATATAAACTAATGGAA+TGG - chr5_3:42740877-42740896 None:intergenic 20.0%
!!! TTTTAAATTGGTGGTAAAAA+AGG + chr5_3:42741230-42741249 Msa0812590:intron 20.0%
!!! ATTTCTATAACTGATTTGAA+TGG + chr5_3:42741518-42741537 Msa0812590:three_prime_UTR 20.0%
!! ATTTATGAACTTCTTGAATA+TGG + chr5_3:42741553-42741572 Msa0812590:intron 20.0%
!! TGGATTACTTAATTATGATT+TGG + chr5_3:42741573-42741592 Msa0812590:intron 20.0%
!!! TTTTAACTTGTATGATTTAG+TGG + chr5_3:42741654-42741673 Msa0812590:intron 20.0%
!!! TTTAACTTGTATGATTTAGT+GGG + chr5_3:42741655-42741674 Msa0812590:intron 20.0%
!! AACGAAAAAAAAATAGACAA+TGG - chr5_3:42741769-42741788 None:intergenic 20.0%
!!! TTAATGTGAATTTAGGTTAT+AGG - chr5_3:42741891-42741910 None:intergenic 20.0%
!! TGGTTTATTAATGTGAATTT+AGG - chr5_3:42741898-42741917 None:intergenic 20.0%
!! AAAAATAAGTAAATTCAGGA+GGG - chr5_3:42741948-42741967 None:intergenic 20.0%
!!! AATTTTAATGGGTCTAAAAA+AGG + chr5_3:42742271-42742290 Msa0812590:intron 20.0%
!! AAAAATGAAGATACATGTTT+GGG - chr5_3:42742298-42742317 None:intergenic 20.0%
!! AAAAAATGAAGATACATGTT+TGG - chr5_3:42742299-42742318 None:intergenic 20.0%
!!! GTCCTTATATTTTTAATGAA+TGG - chr5_3:42742413-42742432 None:intergenic 20.0%
!! TATACAAAAAAGAAGACAAA+AGG + chr5_3:42742491-42742510 Msa0812590:intron 20.0%
!!! AATAATATCATTTAGTTTCC+AGG - chr5_3:42743121-42743140 None:intergenic 20.0%
!! AAAATAAATTTCAGAACTTG+TGG - chr5_3:42743185-42743204 None:intergenic 20.0%
!!! ATTAGTTTTAAGTATGATTG+GGG - chr5_3:42743254-42743273 None:intergenic 20.0%
!! TATATAGTAGAAAGGAAAAA+AGG + chr5_3:42743511-42743530 Msa0812590:intron 20.0%
!!! AAAGTAATGATGTCAAATTT+TGG + chr5_3:42743562-42743581 Msa0812590:intron 20.0%
!!! GTTTTGAAGCAAAAAATATA+AGG - chr5_3:42743679-42743698 None:intergenic 20.0%
!!! TTATGGCTTTATTTGATATT+TGG + chr5_3:42743740-42743759 Msa0812590:intron 20.0%
!!! TTTATTTTCTCTAAATTGCA+TGG - chr5_3:42743990-42744009 None:intergenic 20.0%
!!! AATCATTTGCTTTTATAATG+AGG + chr5_3:42744008-42744027 Msa0812590:intron 20.0%
!!! ATCATTTGCTTTTATAATGA+GGG + chr5_3:42744009-42744028 Msa0812590:intron 20.0%
!!! AATTAAATTTTGCCAAGATT+TGG - chr5_3:42744190-42744209 None:intergenic 20.0%
!!! ATCTTGGCAAAATTTAATTT+TGG + chr5_3:42744191-42744210 Msa0812590:intron 20.0%
!!! TTATGCTATACATCATTTTA+TGG - chr5_3:42744299-42744318 None:intergenic 20.0%
!!! TTTTATTTTCACATATGCAA+AGG - chr5_3:42744334-42744353 None:intergenic 20.0%
!!! ACATCTTGAAAATTTTAGTA+GGG - chr5_3:42745054-42745073 None:intergenic 20.0%
!!! TACATCTTGAAAATTTTAGT+AGG - chr5_3:42745055-42745074 None:intergenic 20.0%
! GATTACAAAGAAAAATGTGA+AGG + chr5_3:42738723-42738742 Msa0812590:CDS 25.0%
! AGTTTATCTTAAAACTGTAG+AGG + chr5_3:42738824-42738843 Msa0812590:CDS 25.0%
! CGACAAAAACTTATTATATG+CGG + chr5_3:42739018-42739037 Msa0812590:intron 25.0%
! GACAAAAACTTATTATATGC+GGG + chr5_3:42739019-42739038 Msa0812590:intron 25.0%
!! ACTCGGAGTATTAAATTTAA+GGG + chr5_3:42739396-42739415 Msa0812590:intron 25.0%
!! GTCCAACGAAAATAAATTTT+TGG - chr5_3:42739765-42739784 None:intergenic 25.0%
! AACTATTCTATTTCACGATA+AGG + chr5_3:42740205-42740224 Msa0812590:CDS 25.0%
! ACTATTCTATTTCACGATAA+GGG + chr5_3:42740206-42740225 Msa0812590:CDS 25.0%
!!! TTGACAGTGTTTTTAAACTA+TGG - chr5_3:42740438-42740457 None:intergenic 25.0%
! ATAGATCGATAAGAGAAAAT+TGG + chr5_3:42740467-42740486 Msa0812590:intron 25.0%
!!! AAATTAGTCACTTTTTTTCC+TGG + chr5_3:42740772-42740791 Msa0812590:intron 25.0%
!! AATAGAGAAAGAAATTTTCC+AGG - chr5_3:42740793-42740812 None:intergenic 25.0%
! AATATTATCTTGATGAGTCT+AGG + chr5_3:42741003-42741022 Msa0812590:intron 25.0%
!! TTCCTATAGTTAAAGGATTT+TGG - chr5_3:42741063-42741082 None:intergenic 25.0%
! AATGTGTTTCCTATAGTTAA+AGG - chr5_3:42741070-42741089 None:intergenic 25.0%
! CAAACGTTTGATATATTCTA+TGG - chr5_3:42741115-42741134 None:intergenic 25.0%
!! CTGATTTGAATGGTAATTTA+TGG + chr5_3:42741528-42741547 Msa0812590:intron 25.0%
! AAAAAATAGACAATGGAGTT+AGG - chr5_3:42741762-42741781 None:intergenic 25.0%
!! GAAAAATGGACAATGATTTT+GGG - chr5_3:42741798-42741817 None:intergenic 25.0%
!! TGAAAAATGGACAATGATTT+TGG - chr5_3:42741799-42741818 None:intergenic 25.0%
!! TTCTAAAGGTCATTGAAAAA+TGG - chr5_3:42741812-42741831 None:intergenic 25.0%
! CTTTCTTTCTCCATAATATT+TGG - chr5_3:42741918-42741937 None:intergenic 25.0%
! AAAATAAGTAAATTCAGGAG+GGG - chr5_3:42741947-42741966 None:intergenic 25.0%
! CAAAAATAAGTAAATTCAGG+AGG - chr5_3:42741949-42741968 None:intergenic 25.0%
! AATTACCACTTAGAAAATGA+AGG + chr5_3:42741970-42741989 Msa0812590:intron 25.0%
! CATAATATAATGCAACAAAG+AGG + chr5_3:42742064-42742083 Msa0812590:intron 25.0%
!!! GATTTTTTCCAACAAAAAGA+TGG - chr5_3:42742103-42742122 None:intergenic 25.0%
! TACATACAAATAATGAGCAA+AGG - chr5_3:42742206-42742225 None:intergenic 25.0%
!! TGGAAAGATTTTTCCATTAT+TGG + chr5_3:42742387-42742406 Msa0812590:intron 25.0%
!! TTTTAATGAATGGCCAATAA+TGG - chr5_3:42742403-42742422 None:intergenic 25.0%
! GGCCATTCATTAAAAATATA+AGG + chr5_3:42742408-42742427 Msa0812590:intron 25.0%
! TACCTTCAATAAACATTCAA+TGG + chr5_3:42742433-42742452 Msa0812590:intron 25.0%
! TACCATTGAATGTTTATTGA+AGG - chr5_3:42742438-42742457 None:intergenic 25.0%
! TTAAACAGTTTCACTAACAA+TGG + chr5_3:42742603-42742622 Msa0812590:three_prime_UTR 25.0%
! TGTTCTTGTAAAGTTATCAA+TGG + chr5_3:42742632-42742651 Msa0812590:three_prime_UTR 25.0%
! TATCAATGGTCTTTCTATAA+TGG + chr5_3:42742646-42742665 Msa0812590:three_prime_UTR 25.0%
! AAGCAAAGATTCAAACTTTA+GGG - chr5_3:42742781-42742800 None:intergenic 25.0%
! AAAGCAAAGATTCAAACTTT+AGG - chr5_3:42742782-42742801 None:intergenic 25.0%
! ATCTAAACCTATTTGAGTAT+AGG + chr5_3:42742840-42742859 Msa0812590:intron 25.0%
! TCTAAACCTATTTGAGTATA+GGG + chr5_3:42742841-42742860 Msa0812590:intron 25.0%
!! TGAATCATAGATTTAAAGCA+AGG + chr5_3:42742887-42742906 Msa0812590:intron 25.0%
! AAATTCCAAACTGAAATTAG+AGG - chr5_3:42743148-42743167 None:intergenic 25.0%
!!! TTAGTTTTAAGTATGATTGG+GGG - chr5_3:42743253-42743272 None:intergenic 25.0%
!!! TTGTTGTTTAGTCTCTTAAA+AGG + chr5_3:42743277-42743296 Msa0812590:intron 25.0%
!! GCAAGTTTTTCTACAAAATT+AGG + chr5_3:42743349-42743368 Msa0812590:intron 25.0%
! TCATACTCATAGATTGATTA+GGG - chr5_3:42743470-42743489 None:intergenic 25.0%
! ATCATACTCATAGATTGATT+AGG - chr5_3:42743471-42743490 None:intergenic 25.0%
! AATCAATCTATGAGTATGAT+TGG + chr5_3:42743471-42743490 Msa0812590:intron 25.0%
! ATCAATCTATGAGTATGATT+GGG + chr5_3:42743472-42743491 Msa0812590:intron 25.0%
! ACTTTATACATAACCCATTA+AGG + chr5_3:42743595-42743614 Msa0812590:intron 25.0%
! ATCCAATGTATCAACAAAAA+CGG - chr5_3:42743841-42743860 None:intergenic 25.0%
! AATGAATACCATCAAATGAT+AGG + chr5_3:42744069-42744088 Msa0812590:intron 25.0%
!! CTTTTTAACCTATCATTTGA+TGG - chr5_3:42744080-42744099 None:intergenic 25.0%
! TCATTTAATCATACATGAAC+TGG - chr5_3:42744273-42744292 None:intergenic 25.0%
! GTGAAAATAAAAGAATGAAG+AGG + chr5_3:42744342-42744361 Msa0812590:intron 25.0%
! AAAGTGATTAAAGACAAACA+AGG - chr5_3:42744410-42744429 None:intergenic 25.0%
! GCATATTCAACATATTTCTT+TGG - chr5_3:42744507-42744526 None:intergenic 25.0%
! AAGAAATATGTTGAATATGC+AGG + chr5_3:42744507-42744526 Msa0812590:three_prime_UTR 25.0%
! GAAAAAGTAATGATGACTAT+AGG - chr5_3:42744696-42744715 None:intergenic 25.0%
! TTCTTATTGGTCAAAAACAA+TGG - chr5_3:42744885-42744904 None:intergenic 25.0%
!!! TTGTTTTTCTCACTTCTTAT+TGG - chr5_3:42744898-42744917 None:intergenic 25.0%
! AATAAGAAGTGAGAAAAACA+AGG + chr5_3:42744897-42744916 Msa0812590:intron 25.0%
TTCAGAAAAGGTAGTGAAAT+TGG + chr5_3:42738686-42738705 Msa0812590:CDS 30.0%
CTTCTCAAAGTTAGTGAAAT+TGG + chr5_3:42738774-42738793 Msa0812590:CDS 30.0%
! AAACTTTGAGAAGGTCTTTA+GGG - chr5_3:42738809-42738828 None:intergenic 30.0%
! TAAACTTTGAGAAGGTCTTT+AGG - chr5_3:42738810-42738829 None:intergenic 30.0%
TAAAAACCTAAAACGACACT+CGG + chr5_3:42739379-42739398 Msa0812590:intron 30.0%
! CACTCGGAGTATTAAATTTA+AGG + chr5_3:42739395-42739414 Msa0812590:intron 30.0%
CCAATTCAGAATAATTCAGT+GGG - chr5_3:42739825-42739844 None:intergenic 30.0%
CCACTGAATTATTCTGAATT+GGG + chr5_3:42739823-42739842 Msa0812590:intron 30.0%
AAAGGGATAACTCAGAAAAT+GGG - chr5_3:42739899-42739918 None:intergenic 30.0%
AAAAGGGATAACTCAGAAAA+TGG - chr5_3:42739900-42739919 None:intergenic 30.0%
! GTGTTTTCTTTTGACGAAAA+GGG - chr5_3:42739916-42739935 None:intergenic 30.0%
! TGTGTTTTCTTTTGACGAAA+AGG - chr5_3:42739917-42739936 None:intergenic 30.0%
!!! CCACTGTTTTGAAAAACAAA+TGG - chr5_3:42740073-42740092 None:intergenic 30.0%
!! CCATTTGTTTTTCAAAACAG+TGG + chr5_3:42740070-42740089 Msa0812590:intron 30.0%
AATAGGGTCCAAATTAACAT+TGG - chr5_3:42740408-42740427 None:intergenic 30.0%
!!! AGTCGTATTTTTTTAGGGTT+TGG + chr5_3:42740506-42740525 Msa0812590:intron 30.0%
CAAAAAAAATAGGCTTTCCA+AGG + chr5_3:42740907-42740926 Msa0812590:intron 30.0%
GTCCAAAATCCTTTAACTAT+AGG + chr5_3:42741058-42741077 Msa0812590:intron 30.0%
ACGTTTGATATATTCTATGG+AGG - chr5_3:42741112-42741131 None:intergenic 30.0%
AATAAAAATGTCGATGAAGC+AGG - chr5_3:42741343-42741362 None:intergenic 30.0%
! TTGTTTCTTCGTGACATATT+AGG + chr5_3:42741379-42741398 Msa0812590:intron 30.0%
TGTTTCTTCGTGACATATTA+GGG + chr5_3:42741380-42741399 Msa0812590:intron 30.0%
GCGATTTAGTGATTATTTGA+AGG + chr5_3:42741595-42741614 Msa0812590:intron 30.0%
AAGATACTAACATGCAAAGT+TGG - chr5_3:42741629-42741648 None:intergenic 30.0%
AACTTTGCATGTTAGTATCT+TGG + chr5_3:42741628-42741647 Msa0812590:intron 30.0%
ACTTTGCATGTTAGTATCTT+GGG + chr5_3:42741629-42741648 Msa0812590:intron 30.0%
ACTTACATTTGCATCAGATT+TGG + chr5_3:42741734-42741753 Msa0812590:intron 30.0%
! ATGTGAATTTAGGTTATAGG+TGG - chr5_3:42741888-42741907 None:intergenic 30.0%
AACAAAAAGATGGACAGAAT+TGG - chr5_3:42742093-42742112 None:intergenic 30.0%
! AATTCTGTCCATCTTTTTGT+TGG + chr5_3:42742092-42742111 Msa0812590:intron 30.0%
GTTGGAAAAAATCTACACAT+TGG + chr5_3:42742110-42742129 Msa0812590:intron 30.0%
! AAGGTGCATTTTCATTTTAC+TGG - chr5_3:42742187-42742206 None:intergenic 30.0%
! TTGTGCATTTTCAGAAACAA+TGG + chr5_3:42742553-42742572 Msa0812590:intron 30.0%
TTTCAGAAACAATGGAAGAA+AGG + chr5_3:42742561-42742580 Msa0812590:intron 30.0%
AGCAAAGATTCAAACTTTAG+GGG - chr5_3:42742780-42742799 None:intergenic 30.0%
CTATGCGTTATGATATTACA+TGG + chr5_3:42743065-42743084 Msa0812590:intron 30.0%
! TATCATTTAGTTTCCAGGTT+TGG - chr5_3:42743116-42743135 None:intergenic 30.0%
! TTTTGCCTCTAATTTCAGTT+TGG + chr5_3:42743140-42743159 Msa0812590:intron 30.0%
CACTGCAATATATAGTAGAA+AGG + chr5_3:42743503-42743522 Msa0812590:intron 30.0%
! TATCAACAAAAACGGTGTTA+TGG - chr5_3:42743833-42743852 None:intergenic 30.0%
ATTTCATCTTTGATGAGTCT+AGG + chr5_3:42743877-42743896 Msa0812590:intron 30.0%
TATGTTTCAAGAATGCACAT+AGG + chr5_3:42743935-42743954 Msa0812590:intron 30.0%
CATGGAGAGAAGAATTTATT+AGG - chr5_3:42743972-42743991 None:intergenic 30.0%
! TTTAGCTATAGTTTGCAGTT+TGG + chr5_3:42744115-42744134 Msa0812590:intron 30.0%
CGAATATTCAACAACATTGT+TGG + chr5_3:42744161-42744180 Msa0812590:intron 30.0%
AGAATATTGTGATGAAAGAG+GGG - chr5_3:42744458-42744477 None:intergenic 30.0%
CAGAATATTGTGATGAAAGA+GGG - chr5_3:42744459-42744478 None:intergenic 30.0%
TTTCATCACAATATTCTGCA+GGG + chr5_3:42744461-42744480 Msa0812590:intron 30.0%
GCAAATCAATGAAAACAAAG+TGG + chr5_3:42744542-42744561 Msa0812590:three_prime_UTR 30.0%
ATCAATGAAAACAAAGTGGA+AGG + chr5_3:42744546-42744565 Msa0812590:three_prime_UTR 30.0%
ATATACACAGCTTAAACTAG+TGG - chr5_3:42744603-42744622 None:intergenic 30.0%
!!! AACCACTTTTTGACAACTTT+TGG + chr5_3:42744800-42744819 Msa0812590:intron 30.0%
AAAACAATGGAGAGAGAAAA+AGG - chr5_3:42744872-42744891 None:intergenic 30.0%
TCAACAAAGTTGTCATCAAA+TGG + chr5_3:42744923-42744942 Msa0812590:intron 30.0%
!! TTGAAAATTTTAGTAGGGAG+TGG - chr5_3:42745049-42745068 None:intergenic 30.0%
! AAAAGGACTGTATTTTGTGG+TGG - chr5_3:42738604-42738623 None:intergenic 35.0%
! ACCACAAAATACAGTCCTTT+TGG + chr5_3:42738603-42738622 Msa0812590:CDS 35.0%
! ACCAAAAGGACTGTATTTTG+TGG - chr5_3:42738607-42738626 None:intergenic 35.0%
! ACAAAATACAGTCCTTTTGG+TGG + chr5_3:42738606-42738625 Msa0812590:CDS 35.0%
ACATGTTGCACATTCAGAAA+AGG + chr5_3:42738674-42738693 Msa0812590:CDS 35.0%
!! TTTTCCACTGCTTTGTTAAG+AGG - chr5_3:42738750-42738769 None:intergenic 35.0%
TCTTAACAAAGCAGTGGAAA+AGG + chr5_3:42738749-42738768 Msa0812590:CDS 35.0%
TCTTAAAACTGTAGAGGATG+AGG + chr5_3:42738830-42738849 Msa0812590:CDS 35.0%
TTAACCAAACTGTTCAAGTC+AGG - chr5_3:42738879-42738898 None:intergenic 35.0%
!! AAGCGACACTCATTTTGAAA+CGG - chr5_3:42739154-42739173 None:intergenic 35.0%
! TGTGCAGAGTATTAATTGGA+GGG - chr5_3:42739254-42739273 None:intergenic 35.0%
! GTAGTGTGCAGAGTATTAAT+TGG - chr5_3:42739258-42739277 None:intergenic 35.0%
!! ACTATTTGCACTGCTGATTT+AGG + chr5_3:42739790-42739809 Msa0812590:intron 35.0%
ATTCAGAATAATTCAGTGGG+AGG - chr5_3:42739822-42739841 None:intergenic 35.0%
CCCACTGAATTATTCTGAAT+TGG + chr5_3:42739822-42739841 Msa0812590:intron 35.0%
CCCAATTCAGAATAATTCAG+TGG - chr5_3:42739826-42739845 None:intergenic 35.0%
!! GAAAATGGAAAGCATTGGAA+TGG - chr5_3:42739855-42739874 None:intergenic 35.0%
GGAATATACACGTGTGAAAA+TGG - chr5_3:42739870-42739889 None:intergenic 35.0%
TTTCACACGTGTATATTCCA+TGG + chr5_3:42739871-42739890 Msa0812590:intron 35.0%
TCGTCAAAAGAAAACACACA+TGG + chr5_3:42739919-42739938 Msa0812590:intron 35.0%
AAGAAGGTCATAAAAGAGTG+TGG - chr5_3:42739976-42739995 None:intergenic 35.0%
! TGGTATAGAAGTATAGATCG+CGG - chr5_3:42740053-42740072 None:intergenic 35.0%
AAACTATGGCGACAGTAATA+GGG - chr5_3:42740424-42740443 None:intergenic 35.0%
TAAACTATGGCGACAGTAAT+AGG - chr5_3:42740425-42740444 None:intergenic 35.0%
AAAGAGAGGAAAATACACCT+TGG - chr5_3:42740927-42740946 None:intergenic 35.0%
CAGATTCTACTAACAAAGAG+AGG - chr5_3:42740941-42740960 None:intergenic 35.0%
!! ATTCTATGGAGGTACTACAA+TGG - chr5_3:42741101-42741120 None:intergenic 35.0%
! TTGGTGGTAAAAAAGGCAAA+TGG + chr5_3:42741237-42741256 Msa0812590:intron 35.0%
GTTTCTTCGTGACATATTAG+GGG + chr5_3:42741381-42741400 Msa0812590:intron 35.0%
! TCAACACTTTGAAAGTCACA+AGG - chr5_3:42741431-42741450 None:intergenic 35.0%
! GATCACCTTCATTTTCTAAG+TGG - chr5_3:42741978-42741997 None:intergenic 35.0%
GGTCTTTCTATAATGGTGAT+TGG + chr5_3:42742653-42742672 Msa0812590:three_prime_UTR 35.0%
GTGTTACCCTATACTCAAAT+AGG - chr5_3:42742850-42742869 None:intergenic 35.0%
AACAGCGCTTTCTAATGTAA+AGG - chr5_3:42743013-42743032 None:intergenic 35.0%
TTGTGTTAAAACTCCAAACC+TGG + chr5_3:42743100-42743119 Msa0812590:intron 35.0%
!! GACATAGCTTTAGCCTTAAT+GGG - chr5_3:42743611-42743630 None:intergenic 35.0%
!! AGACATAGCTTTAGCCTTAA+TGG - chr5_3:42743612-42743631 None:intergenic 35.0%
ATAAGGGTTGCAGCAAAATT+AGG - chr5_3:42743662-42743681 None:intergenic 35.0%
!! CACCGTTTTTGTTGATACAT+TGG + chr5_3:42743836-42743855 Msa0812590:intron 35.0%
ATGAAGAGGTTAAAGTAGTG+TGG + chr5_3:42744356-42744375 Msa0812590:intron 35.0%
GAATATTGTGATGAAAGAGG+GGG - chr5_3:42744457-42744476 None:intergenic 35.0%
GCAGAATATTGTGATGAAAG+AGG - chr5_3:42744460-42744479 None:intergenic 35.0%
CTTTCATCACAATATTCTGC+AGG + chr5_3:42744460-42744479 Msa0812590:intron 35.0%
AATATGCAGGAAAAGAGATC+TGG + chr5_3:42744520-42744539 Msa0812590:three_prime_UTR 35.0%
GAAAACAAAGTGGAAGGAAA+TGG + chr5_3:42744552-42744571 Msa0812590:three_prime_UTR 35.0%
GTCCAAAAGTTGTCAAAAAG+TGG - chr5_3:42744805-42744824 None:intergenic 35.0%
GCACTCATTGCTATAGTTAT+AGG - chr5_3:42745014-42745033 None:intergenic 35.0%
!! AGCAATGAGTGCTTTTTAAC+TGG + chr5_3:42745022-42745041 Msa0812590:three_prime_UTR 35.0%
!! GCAATGAGTGCTTTTTAACT+GGG + chr5_3:42745023-42745042 Msa0812590:three_prime_UTR 35.0%
! AAATACAGTCCTTTTGGTGG+TGG + chr5_3:42738609-42738628 Msa0812590:CDS 40.0%
! AACATGTTTGCTACCACTAG+CGG - chr5_3:42738661-42738680 None:intergenic 40.0%
!! CAAGTCAGGTGTTTTGTTGA+AGG - chr5_3:42738865-42738884 None:intergenic 40.0%
! AACACCTGACTTGAACAGTT+TGG + chr5_3:42738872-42738891 Msa0812590:intron 40.0%
! GTGTGCAGAGTATTAATTGG+AGG - chr5_3:42739255-42739274 None:intergenic 40.0%
!!! AATACTCCGAGTGTCGTTTT+AGG - chr5_3:42739388-42739407 None:intergenic 40.0%
! CGTGTGAAAATGGAAAGCAT+TGG - chr5_3:42739860-42739879 None:intergenic 40.0%
! AACTCAGAAAATGGGTTCCA+TGG - chr5_3:42739891-42739910 None:intergenic 40.0%
! AAGGTCATAAAAGAGTGTGG+CGG - chr5_3:42739973-42739992 None:intergenic 40.0%
!! AAGCTTTAGAGCGACAAAGA+AGG - chr5_3:42739992-42740011 None:intergenic 40.0%
!! TGTCGCTCTAAAGCTTCATT+TGG + chr5_3:42739996-42740015 Msa0812590:intron 40.0%
!!! GTCAGAAATGGAGTTTTGGA+CGG - chr5_3:42740117-42740136 None:intergenic 40.0%
TCCAAAACTCCATTTCTGAC+AGG + chr5_3:42740117-42740136 Msa0812590:CDS 40.0%
TTACCGATATCTGCATGCAA+TGG - chr5_3:42740302-42740321 None:intergenic 40.0%
ATTGCATGCAGATATCGGTA+AGG + chr5_3:42740301-42740320 Msa0812590:intron 40.0%
TATCTGCAGATCTGTCATCA+AGG + chr5_3:42740564-42740583 Msa0812590:intron 40.0%
ATCTGCAGATCTGTCATCAA+GGG + chr5_3:42740565-42740584 Msa0812590:intron 40.0%
! TCTGTCATCAAGGGGATTTT+TGG + chr5_3:42740574-42740593 Msa0812590:intron 40.0%
! TAATCGACCTTAGTTGATGC+AGG - chr5_3:42741459-42741478 None:intergenic 40.0%
AGGGACAACATATGGTATGT+TGG - chr5_3:42742009-42742028 None:intergenic 40.0%
CAATAGCATTCGTGGACAAA+GGG - chr5_3:42742028-42742047 None:intergenic 40.0%
GGTTTAGATCCCAATCTGAA+GGG - chr5_3:42742829-42742848 None:intergenic 40.0%
AGGTTTAGATCCCAATCTGA+AGG - chr5_3:42742830-42742849 None:intergenic 40.0%
! CATGTTCACAAAAGCACAGA+GGG - chr5_3:42743791-42743810 None:intergenic 40.0%
! ACATGTTCACAAAAGCACAG+AGG - chr5_3:42743792-42743811 None:intergenic 40.0%
! CTGTGCTTTTGTGAACATGT+AGG + chr5_3:42743792-42743811 Msa0812590:intron 40.0%
CATTGTTGGAAGCCAAATCT+TGG + chr5_3:42744175-42744194 Msa0812590:intron 40.0%
AGAGGTTAAAGTAGTGTGGT+TGG + chr5_3:42744360-42744379 Msa0812590:intron 40.0%
AACAAAGTGGAAGGAAATGG+AGG + chr5_3:42744555-42744574 Msa0812590:three_prime_UTR 40.0%
AGAGAGAAAAAGGAAGAGAG+AGG - chr5_3:42744862-42744881 None:intergenic 40.0%
AGGACCTCTTAACAAAGCAG+TGG + chr5_3:42738743-42738762 Msa0812590:CDS 45.0%
!! GGAAAGCATTGGAATGGACT+TGG - chr5_3:42739849-42739868 None:intergenic 45.0%
! ATAAAAGAGTGTGGCGGCTA+CGG - chr5_3:42739967-42739986 None:intergenic 45.0%
TATAGATCGCGGAGAGAGAA+GGG - chr5_3:42740042-42740061 None:intergenic 45.0%
! GCCTGTCAGAAATGGAGTTT+TGG - chr5_3:42740121-42740140 None:intergenic 45.0%
!! AGGCTCCAAGCTATTTTCAG+CGG + chr5_3:42740137-42740156 Msa0812590:CDS 45.0%
CAACTCCGCTGAAAATAGCT+TGG - chr5_3:42740145-42740164 None:intergenic 45.0%
AGCAGAGAGCTCATATGATG+AGG - chr5_3:42740185-42740204 None:intergenic 45.0%
GATCAGAGGAACAAGTACGA+CGG - chr5_3:42740268-42740287 None:intergenic 45.0%
CGACCATTGCATGCAGATAT+CGG + chr5_3:42740296-42740315 Msa0812590:CDS 45.0%
TCTGCAGATCTGTCATCAAG+GGG + chr5_3:42740566-42740585 Msa0812590:intron 45.0%
GATAGTGCCTGCATCAACTA+AGG + chr5_3:42741449-42741468 Msa0812590:three_prime_UTR 45.0%
CGATTAAGCTTGTCGTCGAA+TGG + chr5_3:42741473-42741492 Msa0812590:three_prime_UTR 45.0%
TCTGCAAACTTGACTGCACA+TGG + chr5_3:42741855-42741874 Msa0812590:intron 45.0%
GTGGACAAAGGGACAACATA+TGG - chr5_3:42742017-42742036 None:intergenic 45.0%
GCAATAGCATTCGTGGACAA+AGG - chr5_3:42742029-42742048 None:intergenic 45.0%
ACAGCTTGCAATAGCATTCG+TGG - chr5_3:42742036-42742055 None:intergenic 45.0%
TTTGTGCACTCCCTTCAGAT+TGG + chr5_3:42742816-42742835 Msa0812590:intron 45.0%
TTGTGCACTCCCTTCAGATT+GGG + chr5_3:42742817-42742836 Msa0812590:intron 45.0%
TGCCATCTGCAAAAGTGAAG+AGG + chr5_3:42744033-42744052 Msa0812590:intron 45.0%
GCCATCTGCAAAAGTGAAGA+GGG + chr5_3:42744034-42744053 Msa0812590:intron 45.0%
!! ACCCTCTTCACTTTTGCAGA+TGG - chr5_3:42744038-42744057 None:intergenic 45.0%
GGAAGGAAATGGAGGATGAA+TGG + chr5_3:42744563-42744582 Msa0812590:three_prime_UTR 45.0%
! TTAAAGAGTGGAGCGTCTCT+AGG + chr5_3:42744639-42744658 Msa0812590:three_prime_UTR 45.0%
!!! AGTGGATTGGCGCAGTATTT+TGG - chr5_3:42744729-42744748 None:intergenic 45.0%
TCTCTGCTCATCAAGTGGAT+TGG - chr5_3:42744742-42744761 None:intergenic 45.0%
!! AAAGTAAAAAAAAAAAATTA+TGG + chr5_3:42738937-42738956 Msa0812590:intron 5.0%
!!! AAATTTTTTTATTTTGATTT+TGG - chr5_3:42739651-42739670 None:intergenic 5.0%
!!! GTTTTTTTTTTTTTTTAAAT+TGG + chr5_3:42741218-42741237 Msa0812590:intron 5.0%
!!! TACAGTCCTTTTGGTGGTGG+TGG + chr5_3:42738612-42738631 Msa0812590:CDS 50.0%
! CGGTAGTGTCTTCGGTTTGA+CGG - chr5_3:42738641-42738660 None:intergenic 50.0%
ACCACTAGCGGTAGTGTCTT+CGG - chr5_3:42738649-42738668 None:intergenic 50.0%
GTATAGATCGCGGAGAGAGA+AGG - chr5_3:42740043-42740062 None:intergenic 50.0%
!!! AATGGAGTTTTGGACGGCGA+CGG - chr5_3:42740111-42740130 None:intergenic 50.0%
AGCTTGGAGCCTGTCAGAAA+TGG - chr5_3:42740129-42740148 None:intergenic 50.0%
!! CACGATAAGGGCATCCTTAC+CGG + chr5_3:42740218-42740237 Msa0812590:CDS 50.0%
AATGTCGATGAAGCAGGTGC+AGG - chr5_3:42741337-42741356 None:intergenic 50.0%
! CTGAAGGGAGTGCACAAAAG+AGG - chr5_3:42742814-42742833 None:intergenic 50.0%
GTGCATCTCTGCTCATCAAG+TGG - chr5_3:42744747-42744766 None:intergenic 50.0%
ACCGAAGACACTACCGCTAG+TGG + chr5_3:42738645-42738664 Msa0812590:CDS 55.0%
TGGTCGCAAGTCACGATCAG+AGG - chr5_3:42740282-42740301 None:intergenic 55.0%
CGGCTACCACCACCACCAAA+AGG - chr5_3:42738621-42738640 None:intergenic 60.0%
TGGCGGCTACGGTATGAAGC+AGG - chr5_3:42739956-42739975 None:intergenic 60.0%
CTTACCGGTGACCACCGTAC+CGG + chr5_3:42740233-42740252 Msa0812590:CDS 60.0%
ACTTCCGGTACGGTGGTCAC+CGG - chr5_3:42740240-42740259 None:intergenic 60.0%
AGTACGACGGCTGCGACTTC+CGG - chr5_3:42740255-42740274 None:intergenic 60.0%
AGGGGAGACACGCACAGAGA+GGG - chr5_3:42742762-42742781 None:intergenic 60.0%
TAGGGGAGACACGCACAGAG+AGG - chr5_3:42742763-42742782 None:intergenic 60.0%
TCGCGGAGAGAGAAGGGCGA+TGG - chr5_3:42740036-42740055 None:intergenic 65.0%
!! GTTTTGGACGGCGACGGCGA+CGG - chr5_3:42740105-42740124 None:intergenic 65.0%
CGGTACGGTGGTCACCGGTA+AGG - chr5_3:42740235-42740254 None:intergenic 65.0%
GACGGCTGCGACTTCCGGTA+CGG - chr5_3:42740250-42740269 None:intergenic 65.0%
GGCTGCGACTTCCGGTACGG+TGG - chr5_3:42740247-42740266 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 42738585 42745074 42738585 ID=Msa0812590;Name=Msa0812590
chr5_3 mRNA 42738585 42745074 42738585 ID=Msa0812590-mRNA-1;Parent=Msa0812590;Name=Msa0812590-mRNA-1;_AED=0.29;_eAED=0.29;_QI=0|0.8|0.66|0.83|0.4|0.33|6|622|188
chr5_3 exon 42738585 42738888 42738585 ID=Msa0812590-mRNA-1:exon:13150;Parent=Msa0812590-mRNA-1
chr5_3 exon 42740090 42740317 42740090 ID=Msa0812590-mRNA-1:exon:13151;Parent=Msa0812590-mRNA-1
chr5_3 exon 42741401 42741539 42741401 ID=Msa0812590-mRNA-1:exon:13152;Parent=Msa0812590-mRNA-1
chr5_3 exon 42742567 42742679 42742567 ID=Msa0812590-mRNA-1:exon:13153;Parent=Msa0812590-mRNA-1
chr5_3 exon 42744482 42744781 42744482 ID=Msa0812590-mRNA-1:exon:13154;Parent=Msa0812590-mRNA-1
chr5_3 exon 42744970 42745074 42744970 ID=Msa0812590-mRNA-1:exon:13155;Parent=Msa0812590-mRNA-1
chr5_3 CDS 42738585 42738888 42738585 ID=Msa0812590-mRNA-1:cds;Parent=Msa0812590-mRNA-1
chr5_3 CDS 42740090 42740317 42740090 ID=Msa0812590-mRNA-1:cds;Parent=Msa0812590-mRNA-1
chr5_3 CDS 42741401 42741435 42741401 ID=Msa0812590-mRNA-1:cds;Parent=Msa0812590-mRNA-1
chr5_3 three_prime_UTR 42741436 42741539 42741436 ID=Msa0812590-mRNA-1:three_prime_utr;Parent=Msa0812590-mRNA-1
chr5_3 three_prime_UTR 42742567 42742679 42742567 ID=Msa0812590-mRNA-1:three_prime_utr;Parent=Msa0812590-mRNA-1
chr5_3 three_prime_UTR 42744482 42744781 42744482 ID=Msa0812590-mRNA-1:three_prime_utr;Parent=Msa0812590-mRNA-1
chr5_3 three_prime_UTR 42744970 42745074 42744970 ID=Msa0812590-mRNA-1:three_prime_utr;Parent=Msa0812590-mRNA-1
Gene Sequence

>Msa0812590

TGCACATTCTTTGTTGCCACCACAAAATACAGTCCTTTTGGTGGTGGTGGTAGCCGTCAAACCGAAGACACTACCGCTAGTGGTAGCAAACATGTTGCACATTCAGAAAAGGTAGTGAAATTGGTATGCAGTTCTGCAGATTACAAAGAAAAATGTGAAGGACCTCTTAACAAAGCAGTGGAAAAGGATCTTCTCAAAGTTAGTGAAATTGGACTTCAGCACCCTAAAGACCTTCTCAAAGTTTATCTTAAAACTGTAGAGGATGAGGTTAACAAAGCCTTCAACAAAACACCTGACTTGAACATGGAGTTGAGAACCGTCGCCGTCGCCGTCCAAAACTCCATTTCTGACAGGCTCCAAGCTATTTTCAGCGGAGTTGAGTACTCGATTTGTGATCCTCATCATATGAGCTCTCTGCTAACTATTCTATTTCACGATAAGGGCATCCTTACCGGTGACCACCGTACCGGAAGTCGCAGCCGTCGTACTTGTTCCTCTGATCGTGACTTGCGACCATTGCATGCAGATATCGGGGACAGATGTGAGATGACTGTGACATCCTTGTGA
Protein sequence

>Msa0812590

CTFFVATTKYSPFGGGGSRQTEDTTASGSKHVAHSEKVVKLVCSSADYKEKCEGPLNKAVEKDLLKVSEIGLQHPKDLLKVYLKTVEDEVNKAFNKTPDLNMELRTVAVAVQNSISDRLQAIFSGVEYSICDPHHMSSLLTILFHDKGILTGDHRTGSRSRRTCSSDRDLRPLHADIGDRCEMTVTSL*