Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0818910 | XP_003616719.1 | 70.513 | 78 | 18 | 2 | 21 | 93 | 85 | 162 | 4.40e-23 | 108 |
| Msa0818910 | XP_003616719.1 | 95.113 | 266 | 13 | 0 | 96 | 361 | 1 | 266 | 0.0 | 527 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0818910 | sp|Q944B6|TYRA1_ARATH | 56.439 | 264 | 110 | 2 | 96 | 355 | 359 | 621 | 4.46e-98 | 306 |
| Msa0818910 | sp|Q944B6|TYRA1_ARATH | 50.000 | 260 | 123 | 3 | 99 | 352 | 50 | 308 | 1.94e-81 | 263 |
| Msa0818910 | sp|Q944B6|TYRA1_ARATH | 49.367 | 79 | 32 | 3 | 23 | 93 | 445 | 523 | 2.55e-11 | 68.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0818910 | G7K796 | 70.513 | 78 | 18 | 2 | 21 | 93 | 85 | 162 | 2.10e-23 | 108 |
| Msa0818910 | G7K796 | 95.113 | 266 | 13 | 0 | 96 | 361 | 1 | 266 | 0.0 | 527 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0054730 | Msa0818910 | -0.813775 | 2.157992e-51 | -8.615850e-47 |
| Msa0106370 | Msa0818910 | -0.816545 | 5.233082e-52 | -8.615850e-47 |
| Msa0818910 | Msa0836680 | 0.807509 | 4.882217e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0818910 | MtrunA17_Chr5g0437781 | 95.113 | 266 | 13 | 0 | 96 | 361 | 1 | 266 | 0.0 | 527 |
| Msa0818910 | MtrunA17_Chr5g0437781 | 70.513 | 78 | 18 | 2 | 21 | 93 | 85 | 162 | 4.04e-27 | 108 |
| Msa0818910 | MtrunA17_Chr3g0114251 | 76.515 | 264 | 61 | 1 | 97 | 360 | 3 | 265 | 2.71e-148 | 419 |
| Msa0818910 | MtrunA17_Chr3g0114251 | 64.935 | 77 | 23 | 2 | 21 | 93 | 86 | 162 | 2.75e-23 | 97.8 |
| Msa0818910 | MtrunA17_Chr4g0064761 | 54.440 | 259 | 113 | 3 | 98 | 352 | 379 | 636 | 1.24e-88 | 280 |
| Msa0818910 | MtrunA17_Chr4g0064761 | 47.535 | 284 | 142 | 3 | 75 | 354 | 48 | 328 | 1.36e-86 | 275 |
| Msa0818910 | MtrunA17_Chr5g0437791 | 92.135 | 89 | 7 | 0 | 5 | 93 | 14 | 102 | 4.00e-55 | 176 |
| Msa0818910 | MtrunA17_Chr5g0437791 | 60.714 | 84 | 28 | 2 | 174 | 257 | 24 | 102 | 3.40e-24 | 95.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0818910 | AT5G34930.3 | 56.439 | 264 | 110 | 2 | 96 | 355 | 339 | 601 | 2.23e-99 | 307 |
| Msa0818910 | AT5G34930.3 | 50.000 | 260 | 123 | 3 | 99 | 352 | 30 | 288 | 1.03e-82 | 264 |
| Msa0818910 | AT5G34930.3 | 49.367 | 79 | 32 | 3 | 23 | 93 | 425 | 503 | 2.41e-12 | 68.6 |
| Msa0818910 | AT5G34930.1 | 56.439 | 264 | 110 | 2 | 96 | 355 | 359 | 621 | 4.53e-99 | 306 |
| Msa0818910 | AT5G34930.1 | 50.000 | 260 | 123 | 3 | 99 | 352 | 50 | 308 | 1.97e-82 | 263 |
| Msa0818910 | AT5G34930.1 | 49.367 | 79 | 32 | 3 | 23 | 93 | 445 | 523 | 2.59e-12 | 68.6 |
| Msa0818910 | AT5G34930.2 | 56.439 | 264 | 110 | 2 | 96 | 355 | 381 | 643 | 9.45e-99 | 306 |
| Msa0818910 | AT5G34930.2 | 50.000 | 260 | 123 | 3 | 99 | 352 | 72 | 330 | 3.50e-82 | 263 |
| Msa0818910 | AT5G34930.2 | 49.367 | 79 | 32 | 3 | 23 | 93 | 467 | 545 | 2.86e-12 | 68.6 |
| Msa0818910 | AT1G15710.1 | 49.301 | 286 | 138 | 3 | 74 | 355 | 33 | 315 | 2.35e-93 | 283 |
| Msa0818910 | AT1G15710.1 | 51.389 | 72 | 28 | 2 | 29 | 93 | 146 | 217 | 1.16e-11 | 65.9 |
Find 80 sgRNAs with CRISPR-Local
Find 546 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACCCATTCTTTCCACTTTC+TGG | -0.015510 | 5_3:+55012809 | None:intergenic |
| TGGTTCCTTTGGTCAATTTC+TGG | 0.136101 | 5_3:-55013599 | Msa0818910:CDS |
| CAGCCATTACTTGATCATTA+TGG | 0.200099 | 5_3:-55011601 | Msa0818910:three_prime_UTR |
| AATTCACCTTCTCTGAAAAT+TGG | 0.228956 | 5_3:-55013634 | Msa0818910:CDS |
| CACCCATCCTTTCCACTCTC+TGG | 0.295536 | 5_3:+55015658 | None:intergenic |
| TTCCAAGTCACTCTCTCTAT+TGG | 0.298284 | 5_3:+55011506 | None:intergenic |
| CACTTTCTGGTCCAAACATT+GGG | 0.300748 | 5_3:+55012822 | None:intergenic |
| AAAATTGGCATAGTTGGATT+TGG | 0.317252 | 5_3:-55013619 | Msa0818910:CDS |
| CTATAGTGTGTGTTATAAAT+TGG | 0.325432 | 5_3:+55012273 | None:intergenic |
| TCTCTGAAAATTGGCATAGT+TGG | 0.330519 | 5_3:-55013625 | Msa0818910:CDS |
| GTTCTCAGTTCTATGTCATT+TGG | 0.336804 | 5_3:-55013320 | Msa0818910:CDS |
| ATAGTTGGATTTGGTTCCTT+TGG | 0.337318 | 5_3:-55013610 | Msa0818910:CDS |
| TATTAGGACATTGGCAGAAA+TGG | 0.349070 | 5_3:-55012168 | Msa0818910:intron |
| CTCTCACACATGTCTCCAAT+TGG | 0.350642 | 5_3:-55013521 | Msa0818910:CDS |
| CTCTGCACACACCCAATGTT+TGG | 0.359681 | 5_3:-55012833 | Msa0818910:CDS |
| CACTCTCTGGTCCAACCATT+AGG | 0.359843 | 5_3:+55015671 | None:intergenic |
| GAAGGTGAATTTGACATGAT+TGG | 0.363644 | 5_3:+55013646 | None:intergenic |
| TCCAAGTCACTCTCTCTATT+GGG | 0.363791 | 5_3:+55011507 | None:intergenic |
| CAGAGTATACCTGACTCTTC+TGG | 0.373627 | 5_3:+55015700 | None:intergenic |
| CCACTTTCTGGTCCAAACAT+TGG | 0.375400 | 5_3:+55012821 | None:intergenic |
| GCATGATAGTATGGTAGATA+TGG | 0.380436 | 5_3:-55011537 | Msa0818910:three_prime_UTR |
| ACATCAACAAAGAGTGTTGT+TGG | 0.383652 | 5_3:+55013284 | None:intergenic |
| ACCCGCAATAAAAGTTCTCT+TGG | 0.385892 | 5_3:+55013242 | None:intergenic |
| CTTTCAAACACTTACTCAAC+TGG | 0.394180 | 5_3:-55012114 | Msa0818910:intron |
| AATTGGGCATTCAATTCTTC+AGG | 0.395208 | 5_3:-55013504 | Msa0818910:intron |
| ACATGGTCAACAAGATTATT+AGG | 0.422140 | 5_3:+55011690 | None:intergenic |
| TATACTCTGCACACACCTAA+TGG | 0.431917 | 5_3:-55015686 | Msa0818910:CDS |
| GAGAGAGTGACTTGGAAAGT+AGG | 0.434389 | 5_3:-55011500 | Msa0818910:three_prime_UTR |
| TATGGTGTGGCATGATAGTA+TGG | 0.440632 | 5_3:-55011546 | Msa0818910:three_prime_UTR |
| TCTGGTAGTAAGAGGTCTCT+TGG | 0.443241 | 5_3:+55015718 | None:intergenic |
| TGAAGAATTGAATGCCCAAT+TGG | 0.444835 | 5_3:+55013506 | None:intergenic |
| GCATCTCTTTAACTTTGTCT+AGG | 0.452437 | 5_3:+55011766 | None:intergenic |
| TCAAAGGATGAGAGAGGAGC+TGG | 0.462873 | 5_3:-55011739 | Msa0818910:CDS |
| GACTGTAAGAATTGCAAGAA+AGG | 0.480661 | 5_3:+55011634 | None:intergenic |
| CATCTCTTTAACTTTGTCTA+GGG | 0.490140 | 5_3:+55011767 | None:intergenic |
| GGACCAGAAAGTGGAAAGAA+TGG | 0.499480 | 5_3:-55012812 | Msa0818910:CDS |
| CCCGCAATAAAAGTTCTCTT+GGG | 0.502329 | 5_3:+55013243 | None:intergenic |
| TATGAGTATGACATCGTTGT+TGG | 0.509800 | 5_3:+55013370 | None:intergenic |
| CATGATAGTATGGTAGATAT+GGG | 0.512870 | 5_3:-55011536 | Msa0818910:three_prime_UTR |
| CCAATGTTTGGACCAGAAAG+TGG | 0.515512 | 5_3:-55012821 | Msa0818910:CDS |
| CAATTTATAACACACACTAT+AGG | 0.519621 | 5_3:-55012272 | Msa0818910:CDS |
| AGACAAAGTTAAAGAGATGC+TGG | 0.520919 | 5_3:-55011763 | Msa0818910:CDS |
| TCCACACCTATTGATACAAA+AGG | 0.523623 | 5_3:-55012137 | Msa0818910:CDS |
| CTCTGCACACACCTAATGGT+TGG | 0.529930 | 5_3:-55015682 | Msa0818910:CDS |
| CTCTTACTACCAGAAGAGTC+AGG | 0.531601 | 5_3:-55015709 | Msa0818910:CDS |
| CTGACTCTTCTGGTAGTAAG+AGG | 0.534557 | 5_3:+55015710 | None:intergenic |
| CAGAGTATATCTGACTCCTC+TGG | 0.534705 | 5_3:+55012851 | None:intergenic |
| TTAAAGAGATGCTGGTTCAA+AGG | 0.536690 | 5_3:-55011755 | Msa0818910:CDS |
| CTTTGTCTAGGGCACGTTGG+AGG | 0.549429 | 5_3:+55011778 | None:intergenic |
| TCTCACACATGTCTCCAATT+GGG | 0.550802 | 5_3:-55013520 | Msa0818910:CDS |
| TTGACTAAAAGAACATCAAG+TGG | 0.555457 | 5_3:+55015748 | None:intergenic |
| TTCCTAACAGGTTCTGCCAG+AGG | 0.555559 | 5_3:-55012867 | Msa0818910:intron |
| GACCAGAAAGTGGAAAGAAT+GGG | 0.558481 | 5_3:-55012811 | Msa0818910:CDS |
| AAAAGAACATCAAGTGGTGT+TGG | 0.560732 | 5_3:+55015754 | None:intergenic |
| AATCCATAATGATCAAGTAA+TGG | 0.560778 | 5_3:+55011598 | None:intergenic |
| GGACCAGAGAGTGGAAAGGA+TGG | 0.567686 | 5_3:-55015661 | Msa0818910:CDS |
| CAGATCAAAACTATCTCTCA+TGG | 0.568824 | 5_3:+55011998 | None:intergenic |
| TTGAAGTTGCAGTTAGAGTG+TGG | 0.571449 | 5_3:+55013554 | None:intergenic |
| AATATGCAGAAAATTAGAGC+AGG | 0.590082 | 5_3:+55012736 | None:intergenic |
| TAACAGATTCGCTAAGCAAG+AGG | 0.600582 | 5_3:-55011955 | Msa0818910:intron |
| TTATAACACACACTATAGGC+AGG | 0.602882 | 5_3:-55012268 | Msa0818910:intron |
| CAAAGGATGAGAGAGGAGCT+GGG | 0.609354 | 5_3:-55011738 | Msa0818910:CDS |
| CTAATGGTTGGACCAGAGAG+TGG | 0.611480 | 5_3:-55015670 | Msa0818910:CDS |
| GCCCAATAGAGAGAGTGACT+TGG | 0.612363 | 5_3:-55011508 | Msa0818910:three_prime_UTR |
| GGACACAATGAGGAATGTGA+AGG | 0.613389 | 5_3:-55011441 | Msa0818910:three_prime_UTR |
| GACCAGAGAGTGGAAAGGAT+GGG | 0.614946 | 5_3:-55015660 | Msa0818910:CDS |
| CGCTTAAGACAAGCACATGA+CGG | 0.619937 | 5_3:+55015778 | None:intergenic |
| AATTGTGAATGTGTCAGCTA+TGG | 0.625758 | 5_3:-55011564 | Msa0818910:three_prime_UTR |
| CTTTGCCAGAAATTGACCAA+AGG | 0.636456 | 5_3:+55013594 | None:intergenic |
| GCTGGTTCAAAGGATGAGAG+AGG | 0.638776 | 5_3:-55011745 | Msa0818910:CDS |
| CAGAAAGTGGAAAGAATGGG+TGG | 0.639722 | 5_3:-55012808 | Msa0818910:CDS |
| TAACTTTGTCTAGGGCACGT+TGG | 0.641807 | 5_3:+55011775 | None:intergenic |
| GGATGTTAGAACATTCATTG+AGG | 0.659527 | 5_3:-55013393 | Msa0818910:CDS |
| CTTGGAAAGTAGGAATGACA+CGG | 0.663706 | 5_3:-55011490 | Msa0818910:three_prime_UTR |
| GCAAAGACTATGATCAAACA+AGG | 0.666193 | 5_3:-55013577 | Msa0818910:CDS |
| CATGACGGAACTGAGAACCT+CGG | 0.679720 | 5_3:+55015793 | None:intergenic |
| GGTTGGACCAGAGAGTGGAA+AGG | 0.682707 | 5_3:-55015665 | Msa0818910:CDS |
| AGGGTTCTAAGGACACAATG+AGG | 0.687262 | 5_3:-55011451 | Msa0818910:three_prime_UTR |
| ATCAAAACTATCTCTCATGG+TGG | 0.735341 | 5_3:+55012001 | None:intergenic |
| TGAATGTGTCAGCTATGGTG+TGG | 0.736953 | 5_3:-55011559 | Msa0818910:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATATTTTATAAAATAGTG+TGG | + | chr5_3:55012249-55012268 | None:intergenic | 10.0% |
| !!! | TAAACATATATTTTTGAAAA+TGG | - | chr5_3:55012477-55012496 | Msa0818910:intron | 10.0% |
| !!! | ATACATTATTTTTAACTTTT+TGG | + | chr5_3:55012561-55012580 | None:intergenic | 10.0% |
| !! | AAACCTAAATAAAAATATTT+GGG | + | chr5_3:55013228-55013247 | None:intergenic | 10.0% |
| !!! | TTAAGAAATTATTTTTTTGA+GGG | + | chr5_3:55013377-55013396 | None:intergenic | 10.0% |
| !!! | ATTAAGAAATTATTTTTTTG+AGG | + | chr5_3:55013378-55013397 | None:intergenic | 10.0% |
| !!! | AATGTTTTTAGATATAAAAA+AGG | + | chr5_3:55013441-55013460 | None:intergenic | 10.0% |
| !!! | TTTTTTATATCTAAAAACAT+TGG | - | chr5_3:55013440-55013459 | Msa0818910:intron | 10.0% |
| !! | TCTAATAAAAAATAAAAACA+TGG | + | chr5_3:55013766-55013785 | None:intergenic | 10.0% |
| !!! | TTTTTTATTAGATTAATCAA+TGG | - | chr5_3:55013774-55013793 | Msa0818910:intron | 10.0% |
| !! | TAATTTGAGAAAATAAATAT+AGG | + | chr5_3:55014149-55014168 | None:intergenic | 10.0% |
| !!! | AAATATTTTATAAAATAGTG+TGG | + | chr5_3:55012249-55012268 | None:intergenic | 10.0% |
| !!! | TAAACATATATTTTTGAAAA+TGG | - | chr5_3:55012477-55012496 | Msa0818910:intron | 10.0% |
| !!! | ATACATTATTTTTAACTTTT+TGG | + | chr5_3:55012561-55012580 | None:intergenic | 10.0% |
| !! | AAACCTAAATAAAAATATTT+GGG | + | chr5_3:55013228-55013247 | None:intergenic | 10.0% |
| !!! | TTAAGAAATTATTTTTTTGA+GGG | + | chr5_3:55013377-55013396 | None:intergenic | 10.0% |
| !!! | ATTAAGAAATTATTTTTTTG+AGG | + | chr5_3:55013378-55013397 | None:intergenic | 10.0% |
| !!! | AATGTTTTTAGATATAAAAA+AGG | + | chr5_3:55013441-55013460 | None:intergenic | 10.0% |
| !!! | TTTTTTATATCTAAAAACAT+TGG | - | chr5_3:55013440-55013459 | Msa0818910:intron | 10.0% |
| !! | TCTAATAAAAAATAAAAACA+TGG | + | chr5_3:55013766-55013785 | None:intergenic | 10.0% |
| !!! | TTTTTTATTAGATTAATCAA+TGG | - | chr5_3:55013774-55013793 | Msa0818910:intron | 10.0% |
| !! | TAATTTGAGAAAATAAATAT+AGG | + | chr5_3:55014149-55014168 | None:intergenic | 10.0% |
| !!! | CAAAAATGTTCTTTAAAATA+AGG | - | chr5_3:55011955-55011974 | Msa0818910:intron | 15.0% |
| !!! | AGAAACAAAAAGTTTTTTTA+GGG | - | chr5_3:55012414-55012433 | Msa0818910:intron | 15.0% |
| !!! | CATTGTAAAAATTAACTTTT+TGG | + | chr5_3:55012451-55012470 | None:intergenic | 15.0% |
| !!! | CAAAAAGTTAATTTTTACAA+TGG | - | chr5_3:55012449-55012468 | Msa0818910:intron | 15.0% |
| !!! | ACATTGATTTTATATTGAAT+AGG | + | chr5_3:55012844-55012863 | None:intergenic | 15.0% |
| !! | TATTCAATATAAAATCAATG+TGG | - | chr5_3:55012843-55012862 | Msa0818910:CDS | 15.0% |
| !!! | TTAATGTTTTTTTTTACCAA+AGG | - | chr5_3:55013041-55013060 | Msa0818910:intron | 15.0% |
| !! | CAAAATCAAGTAAAAATTAA+AGG | + | chr5_3:55013197-55013216 | None:intergenic | 15.0% |
| !! | CAAACCTAAATAAAAATATT+TGG | + | chr5_3:55013229-55013248 | None:intergenic | 15.0% |
| !!! | TTTAGATATAAAAAAGGTTT+TGG | + | chr5_3:55013435-55013454 | None:intergenic | 15.0% |
| !! | TGATTGAAGTTATAAAAAAT+CGG | + | chr5_3:55013520-55013539 | None:intergenic | 15.0% |
| !!! | TTTGAGTTTCTTTTTTTATT+AGG | - | chr5_3:55015056-55015075 | Msa0818910:intron | 15.0% |
| !!! | CAAAAATGTTCTTTAAAATA+AGG | - | chr5_3:55011955-55011974 | Msa0818910:intron | 15.0% |
| !!! | AGAAACAAAAAGTTTTTTTA+GGG | - | chr5_3:55012414-55012433 | Msa0818910:intron | 15.0% |
| !!! | CATTGTAAAAATTAACTTTT+TGG | + | chr5_3:55012451-55012470 | None:intergenic | 15.0% |
| !!! | CAAAAAGTTAATTTTTACAA+TGG | - | chr5_3:55012449-55012468 | Msa0818910:intron | 15.0% |
| !!! | ACATTGATTTTATATTGAAT+AGG | + | chr5_3:55012844-55012863 | None:intergenic | 15.0% |
| !! | TATTCAATATAAAATCAATG+TGG | - | chr5_3:55012843-55012862 | Msa0818910:CDS | 15.0% |
| !!! | TTAATGTTTTTTTTTACCAA+AGG | - | chr5_3:55013041-55013060 | Msa0818910:intron | 15.0% |
| !! | CAAAATCAAGTAAAAATTAA+AGG | + | chr5_3:55013197-55013216 | None:intergenic | 15.0% |
| !! | CAAACCTAAATAAAAATATT+TGG | + | chr5_3:55013229-55013248 | None:intergenic | 15.0% |
| !!! | TTTAGATATAAAAAAGGTTT+TGG | + | chr5_3:55013435-55013454 | None:intergenic | 15.0% |
| !! | TGATTGAAGTTATAAAAAAT+CGG | + | chr5_3:55013520-55013539 | None:intergenic | 15.0% |
| !!! | TTTGAGTTTCTTTTTTTATT+AGG | - | chr5_3:55015056-55015075 | Msa0818910:intron | 15.0% |
| !! | AATTAAAATATATGTGTGCA+TGG | - | chr5_3:55011915-55011934 | Msa0818910:intron | 20.0% |
| !! | ATTAAAATATATGTGTGCAT+GGG | - | chr5_3:55011916-55011935 | Msa0818910:intron | 20.0% |
| !!! | AAAATGGAAGGTTTTAAAAT+AGG | + | chr5_3:55012102-55012121 | None:intergenic | 20.0% |
| !!! | AAATAGGATTGATAGTAAAA+TGG | + | chr5_3:55012118-55012137 | None:intergenic | 20.0% |
| !!! | TTTACTATCAATCCTATTTT+AGG | - | chr5_3:55012119-55012138 | Msa0818910:CDS | 20.0% |
| !!! | GAGAAACAAAAAGTTTTTTT+AGG | - | chr5_3:55012413-55012432 | Msa0818910:intron | 20.0% |
| !!! | AAAGTTAATTTTTACAATGG+AGG | - | chr5_3:55012452-55012471 | Msa0818910:intron | 20.0% |
| !!! | AAGTTAATTTTTACAATGGA+GGG | - | chr5_3:55012453-55012472 | Msa0818910:intron | 20.0% |
| !!! | ACATATATTTTTGAAAATGG+AGG | - | chr5_3:55012480-55012499 | Msa0818910:intron | 20.0% |
| !!! | TATAATCTTAAATGCACTTT+TGG | + | chr5_3:55012508-55012527 | None:intergenic | 20.0% |
| !!! | AATTTTTTTTTTCTCTACAC+TGG | - | chr5_3:55012687-55012706 | Msa0818910:intron | 20.0% |
| !! | TATAAATCTATGAAGTATGA+AGG | + | chr5_3:55012804-55012823 | None:intergenic | 20.0% |
| !! | AACCCCAAATAAATATTATT+TGG | - | chr5_3:55013095-55013114 | Msa0818910:intron | 20.0% |
| !! | ACCCCAAATAAATATTATTT+GGG | - | chr5_3:55013096-55013115 | Msa0818910:intron | 20.0% |
| !! | TGCCCAAATAATATTTATTT+GGG | + | chr5_3:55013101-55013120 | None:intergenic | 20.0% |
| !!! | ATGTAAGAAAGTCTAATTTT+GGG | + | chr5_3:55013551-55013570 | None:intergenic | 20.0% |
| !!! | TGATTTGTAAAATGTCATAT+CGG | + | chr5_3:55014734-55014753 | None:intergenic | 20.0% |
| !!! | TTCTTTTTTTATTAGGACAT+TGG | - | chr5_3:55015063-55015082 | Msa0818910:intron | 20.0% |
| !! | AAAACTATTTACTTTGTATC+AGG | - | chr5_3:55015353-55015372 | Msa0818910:intron | 20.0% |
| !! | AAACTATTTACTTTGTATCA+GGG | - | chr5_3:55015354-55015373 | Msa0818910:intron | 20.0% |
| !!! | CATAATTTTATGAATGAACA+TGG | + | chr5_3:55015570-55015589 | None:intergenic | 20.0% |
| !! | AATTAAAATATATGTGTGCA+TGG | - | chr5_3:55011915-55011934 | Msa0818910:intron | 20.0% |
| !! | ATTAAAATATATGTGTGCAT+GGG | - | chr5_3:55011916-55011935 | Msa0818910:intron | 20.0% |
| !!! | AAAATGGAAGGTTTTAAAAT+AGG | + | chr5_3:55012102-55012121 | None:intergenic | 20.0% |
| !!! | AAATAGGATTGATAGTAAAA+TGG | + | chr5_3:55012118-55012137 | None:intergenic | 20.0% |
| !!! | TTTACTATCAATCCTATTTT+AGG | - | chr5_3:55012119-55012138 | Msa0818910:CDS | 20.0% |
| !!! | GAGAAACAAAAAGTTTTTTT+AGG | - | chr5_3:55012413-55012432 | Msa0818910:intron | 20.0% |
| !!! | AAAGTTAATTTTTACAATGG+AGG | - | chr5_3:55012452-55012471 | Msa0818910:intron | 20.0% |
| !!! | AAGTTAATTTTTACAATGGA+GGG | - | chr5_3:55012453-55012472 | Msa0818910:intron | 20.0% |
| !!! | ACATATATTTTTGAAAATGG+AGG | - | chr5_3:55012480-55012499 | Msa0818910:intron | 20.0% |
| !!! | TATAATCTTAAATGCACTTT+TGG | + | chr5_3:55012508-55012527 | None:intergenic | 20.0% |
| !!! | AATTTTTTTTTTCTCTACAC+TGG | - | chr5_3:55012687-55012706 | Msa0818910:intron | 20.0% |
| !! | TATAAATCTATGAAGTATGA+AGG | + | chr5_3:55012804-55012823 | None:intergenic | 20.0% |
| !! | AACCCCAAATAAATATTATT+TGG | - | chr5_3:55013095-55013114 | Msa0818910:intron | 20.0% |
| !! | ACCCCAAATAAATATTATTT+GGG | - | chr5_3:55013096-55013115 | Msa0818910:intron | 20.0% |
| !! | TGCCCAAATAATATTTATTT+GGG | + | chr5_3:55013101-55013120 | None:intergenic | 20.0% |
| !!! | ATGTAAGAAAGTCTAATTTT+GGG | + | chr5_3:55013551-55013570 | None:intergenic | 20.0% |
| !!! | TGATTTGTAAAATGTCATAT+CGG | + | chr5_3:55014734-55014753 | None:intergenic | 20.0% |
| !!! | TTCTTTTTTTATTAGGACAT+TGG | - | chr5_3:55015063-55015082 | Msa0818910:intron | 20.0% |
| !! | AAAACTATTTACTTTGTATC+AGG | - | chr5_3:55015353-55015372 | Msa0818910:intron | 20.0% |
| !! | AAACTATTTACTTTGTATCA+GGG | - | chr5_3:55015354-55015373 | Msa0818910:intron | 20.0% |
| !!! | CATAATTTTATGAATGAACA+TGG | + | chr5_3:55015570-55015589 | None:intergenic | 20.0% |
| ! | ATAAGGCTTCAATAATCTAT+TGG | - | chr5_3:55011972-55011991 | Msa0818910:CDS | 25.0% |
| !!! | GAAGGTTTTAAAATAGGATT+GGG | + | chr5_3:55012096-55012115 | None:intergenic | 25.0% |
| ! | GTCAAAATTGATCCTAAAAT+AGG | + | chr5_3:55012134-55012153 | None:intergenic | 25.0% |
| ! | ATCAAACTTCATCCTAAAAT+AGG | + | chr5_3:55012204-55012223 | None:intergenic | 25.0% |
| !! | ATGAAGTTTGATCCTATTTT+AGG | - | chr5_3:55012212-55012231 | Msa0818910:intron | 25.0% |
| ! | GAAATGTTTGATCCTAAAAT+AGG | + | chr5_3:55012227-55012246 | None:intergenic | 25.0% |
| !!! | TGAGGTTAATTTTAATGATG+TGG | + | chr5_3:55012353-55012372 | None:intergenic | 25.0% |
| ! | ATTAACCTCAAAATAGAATG+AGG | - | chr5_3:55012363-55012382 | Msa0818910:intron | 25.0% |
| ! | TTAACCTCAAAATAGAATGA+GGG | - | chr5_3:55012364-55012383 | Msa0818910:intron | 25.0% |
| ! | TATTATATTCTCAACCGTTT+GGG | + | chr5_3:55012931-55012950 | None:intergenic | 25.0% |
| ! | TTATTATATTCTCAACCGTT+TGG | + | chr5_3:55012932-55012951 | None:intergenic | 25.0% |
| !! | AATTTTCTCTTTTCCTAGTA+AGG | - | chr5_3:55012953-55012972 | Msa0818910:intron | 25.0% |
| ! | GCCCAAATAATATTTATTTG+GGG | + | chr5_3:55013100-55013119 | None:intergenic | 25.0% |
| ! | GTGCCCAAATAATATTTATT+TGG | + | chr5_3:55013102-55013121 | None:intergenic | 25.0% |
| !!! | GTGCCCAAATATTTTTATTT+AGG | - | chr5_3:55013222-55013241 | Msa0818910:intron | 25.0% |
| !! | TCCTTTTGACACTTATTTAA+GGG | + | chr5_3:55013271-55013290 | None:intergenic | 25.0% |
| !! | ATCCTTTTGACACTTATTTA+AGG | + | chr5_3:55013272-55013291 | None:intergenic | 25.0% |
| !! | GATGTAAGAAAGTCTAATTT+TGG | + | chr5_3:55013552-55013571 | None:intergenic | 25.0% |
| ! | AACTCTATATACTATGTTTC+AGG | - | chr5_3:55013825-55013844 | Msa0818910:intron | 25.0% |
| ! | ACTCTATATACTATGTTTCA+GGG | - | chr5_3:55013826-55013845 | Msa0818910:intron | 25.0% |
| !! | TCATTTTGCAAATGATGAAA+TGG | - | chr5_3:55014556-55014575 | Msa0818910:intron | 25.0% |
| ! | TTCAAAATCTGTTGATATTG+GGG | + | chr5_3:55014603-55014622 | None:intergenic | 25.0% |
| ! | GTTCAAAATCTGTTGATATT+GGG | + | chr5_3:55014604-55014623 | None:intergenic | 25.0% |
| ! | AGTTCAAAATCTGTTGATAT+TGG | + | chr5_3:55014605-55014624 | None:intergenic | 25.0% |
| ! | CACATCAGTATTAGTATATT+CGG | - | chr5_3:55014642-55014661 | Msa0818910:intron | 25.0% |
| ! | TTCAAGCTTCAATTCAAAAT+TGG | - | chr5_3:55014794-55014813 | Msa0818910:intron | 25.0% |
| !! | TATTTTATCATGTTCTTCAC+AGG | + | chr5_3:55014936-55014955 | None:intergenic | 25.0% |
| ! | CTATAGTGTGTGTTATAAAT+TGG | + | chr5_3:55014970-55014989 | None:intergenic | 25.0% |
| ! | CAATTTATAACACACACTAT+AGG | - | chr5_3:55014968-55014987 | Msa0818910:intron | 25.0% |
| ! | GTTTGAAAAAAAATGGTTGA+AGG | + | chr5_3:55015156-55015175 | None:intergenic | 25.0% |
| ! | AGGGAATGTTTGAAAAAAAA+TGG | + | chr5_3:55015163-55015182 | None:intergenic | 25.0% |
| ! | AATGTTAATTAATCGCAGAT+TGG | + | chr5_3:55015195-55015214 | None:intergenic | 25.0% |
| ! | AATCCATAATGATCAAGTAA+TGG | + | chr5_3:55015645-55015664 | None:intergenic | 25.0% |
| !!! | ATTCTAGATCATTTTTCTGT+TGG | - | chr5_3:55015825-55015844 | Msa0818910:CDS | 25.0% |
| ! | ATAAGGCTTCAATAATCTAT+TGG | - | chr5_3:55011972-55011991 | Msa0818910:CDS | 25.0% |
| !!! | GAAGGTTTTAAAATAGGATT+GGG | + | chr5_3:55012096-55012115 | None:intergenic | 25.0% |
| ! | GTCAAAATTGATCCTAAAAT+AGG | + | chr5_3:55012134-55012153 | None:intergenic | 25.0% |
| ! | ATCAAACTTCATCCTAAAAT+AGG | + | chr5_3:55012204-55012223 | None:intergenic | 25.0% |
| !! | ATGAAGTTTGATCCTATTTT+AGG | - | chr5_3:55012212-55012231 | Msa0818910:intron | 25.0% |
| ! | GAAATGTTTGATCCTAAAAT+AGG | + | chr5_3:55012227-55012246 | None:intergenic | 25.0% |
| !!! | TGAGGTTAATTTTAATGATG+TGG | + | chr5_3:55012353-55012372 | None:intergenic | 25.0% |
| ! | ATTAACCTCAAAATAGAATG+AGG | - | chr5_3:55012363-55012382 | Msa0818910:intron | 25.0% |
| ! | TTAACCTCAAAATAGAATGA+GGG | - | chr5_3:55012364-55012383 | Msa0818910:intron | 25.0% |
| ! | TATTATATTCTCAACCGTTT+GGG | + | chr5_3:55012931-55012950 | None:intergenic | 25.0% |
| ! | TTATTATATTCTCAACCGTT+TGG | + | chr5_3:55012932-55012951 | None:intergenic | 25.0% |
| !! | AATTTTCTCTTTTCCTAGTA+AGG | - | chr5_3:55012953-55012972 | Msa0818910:intron | 25.0% |
| ! | GCCCAAATAATATTTATTTG+GGG | + | chr5_3:55013100-55013119 | None:intergenic | 25.0% |
| ! | GTGCCCAAATAATATTTATT+TGG | + | chr5_3:55013102-55013121 | None:intergenic | 25.0% |
| !!! | GTGCCCAAATATTTTTATTT+AGG | - | chr5_3:55013222-55013241 | Msa0818910:intron | 25.0% |
| !! | TCCTTTTGACACTTATTTAA+GGG | + | chr5_3:55013271-55013290 | None:intergenic | 25.0% |
| !! | ATCCTTTTGACACTTATTTA+AGG | + | chr5_3:55013272-55013291 | None:intergenic | 25.0% |
| !! | GATGTAAGAAAGTCTAATTT+TGG | + | chr5_3:55013552-55013571 | None:intergenic | 25.0% |
| ! | AACTCTATATACTATGTTTC+AGG | - | chr5_3:55013825-55013844 | Msa0818910:intron | 25.0% |
| ! | ACTCTATATACTATGTTTCA+GGG | - | chr5_3:55013826-55013845 | Msa0818910:intron | 25.0% |
| !! | TCATTTTGCAAATGATGAAA+TGG | - | chr5_3:55014556-55014575 | Msa0818910:intron | 25.0% |
| ! | TTCAAAATCTGTTGATATTG+GGG | + | chr5_3:55014603-55014622 | None:intergenic | 25.0% |
| ! | GTTCAAAATCTGTTGATATT+GGG | + | chr5_3:55014604-55014623 | None:intergenic | 25.0% |
| ! | AGTTCAAAATCTGTTGATAT+TGG | + | chr5_3:55014605-55014624 | None:intergenic | 25.0% |
| ! | CACATCAGTATTAGTATATT+CGG | - | chr5_3:55014642-55014661 | Msa0818910:intron | 25.0% |
| ! | TTCAAGCTTCAATTCAAAAT+TGG | - | chr5_3:55014794-55014813 | Msa0818910:intron | 25.0% |
| !! | TATTTTATCATGTTCTTCAC+AGG | + | chr5_3:55014936-55014955 | None:intergenic | 25.0% |
| ! | CTATAGTGTGTGTTATAAAT+TGG | + | chr5_3:55014970-55014989 | None:intergenic | 25.0% |
| ! | CAATTTATAACACACACTAT+AGG | - | chr5_3:55014968-55014987 | Msa0818910:intron | 25.0% |
| ! | GTTTGAAAAAAAATGGTTGA+AGG | + | chr5_3:55015156-55015175 | None:intergenic | 25.0% |
| ! | AGGGAATGTTTGAAAAAAAA+TGG | + | chr5_3:55015163-55015182 | None:intergenic | 25.0% |
| ! | AATGTTAATTAATCGCAGAT+TGG | + | chr5_3:55015195-55015214 | None:intergenic | 25.0% |
| ! | AATCCATAATGATCAAGTAA+TGG | + | chr5_3:55015645-55015664 | None:intergenic | 25.0% |
| !!! | ATTCTAGATCATTTTTCTGT+TGG | - | chr5_3:55015825-55015844 | Msa0818910:CDS | 25.0% |
| TTGACTAAAAGAACATCAAG+TGG | + | chr5_3:55011495-55011514 | None:intergenic | 30.0% | |
| CCTCATTAGCAAAAAAATTG+TGG | + | chr5_3:55011671-55011690 | None:intergenic | 30.0% | |
| !!! | CCACAATTTTTTTGCTAATG+AGG | - | chr5_3:55011668-55011687 | Msa0818910:three_prime_UTR | 30.0% |
| GAGTTAATGACATATGACTA+AGG | + | chr5_3:55011704-55011723 | None:intergenic | 30.0% | |
| ATGTAACAATGTCGATGAAT+CGG | + | chr5_3:55011859-55011878 | None:intergenic | 30.0% | |
| !!! | ACGCTGGTTTTTAAAATGAA+GGG | + | chr5_3:55012036-55012055 | None:intergenic | 30.0% |
| !!! | AACGCTGGTTTTTAAAATGA+AGG | + | chr5_3:55012037-55012056 | None:intergenic | 30.0% |
| !! | TCATTTTAAAAACCAGCGTT+TGG | - | chr5_3:55012037-55012056 | Msa0818910:intron | 30.0% |
| AGTTTGGAAAACTTGAAACA+AGG | + | chr5_3:55012067-55012086 | None:intergenic | 30.0% | |
| !!! | GGAAGGTTTTAAAATAGGAT+TGG | + | chr5_3:55012097-55012116 | None:intergenic | 30.0% |
| ! | AGGATTGATAGTAAAATGGA+AGG | + | chr5_3:55012114-55012133 | None:intergenic | 30.0% |
| !!! | TAGGATCAATTTTGACTTGA+CGG | - | chr5_3:55012138-55012157 | Msa0818910:CDS | 30.0% |
| !!! | GCATGATGCAATCTTATTTT+AGG | - | chr5_3:55012160-55012179 | Msa0818910:CDS | 30.0% |
| ! | TTTCCACCTAATCCTATTTT+AGG | - | chr5_3:55012189-55012208 | Msa0818910:intron | 30.0% |
| CTTCATCCTAAAATAGGATT+AGG | + | chr5_3:55012198-55012217 | None:intergenic | 30.0% | |
| AAAGTGATGATCACGATTAA+GGG | + | chr5_3:55012604-55012623 | None:intergenic | 30.0% | |
| AAAAGTGATGATCACGATTA+AGG | + | chr5_3:55012605-55012624 | None:intergenic | 30.0% | |
| ! | CAATGATTTTGAACCTTACT+AGG | + | chr5_3:55012969-55012988 | None:intergenic | 30.0% |
| GGTTCAAAATCATTGTTCTT+TGG | - | chr5_3:55012974-55012993 | Msa0818910:intron | 30.0% | |
| !! | AAAATATATAGGGTTAGCCT+TGG | + | chr5_3:55013012-55013031 | None:intergenic | 30.0% |
| TTTACCAAAGGACCTTAAAT+AGG | - | chr5_3:55013053-55013072 | Msa0818910:intron | 30.0% | |
| TTACCAAAGGACCTTAAATA+GGG | - | chr5_3:55013054-55013073 | Msa0818910:intron | 30.0% | |
| TGAAAGACTTTCCCTATTTA+AGG | + | chr5_3:55013068-55013087 | None:intergenic | 30.0% | |
| TAAATAGGGAAAGTCTTTCA+TGG | - | chr5_3:55013068-55013087 | Msa0818910:intron | 30.0% | |
| ! | TTTTGACACTTATTTAAGGG+AGG | + | chr5_3:55013268-55013287 | None:intergenic | 30.0% |
| TCCCTTAAATAAGTGTCAAA+AGG | - | chr5_3:55013267-55013286 | Msa0818910:CDS | 30.0% | |
| TGTCAAAAGGATGATCTTTA+AGG | - | chr5_3:55013280-55013299 | Msa0818910:CDS | 30.0% | |
| ! | ACATGATTGGCTAATAGAAA+GGG | + | chr5_3:55013584-55013603 | None:intergenic | 30.0% |
| ! | AATTCACCTTCTCTGAAAAT+TGG | - | chr5_3:55013606-55013625 | Msa0818910:CDS | 30.0% |
| AAAATTGGCATAGTTGGATT+TGG | - | chr5_3:55013621-55013640 | Msa0818910:CDS | 30.0% | |
| ! | ATCCATTCTGTCTTTTTCTA+AGG | - | chr5_3:55013898-55013917 | Msa0818910:intron | 30.0% |
| AACCTTAGAAAAAGACAGAA+TGG | + | chr5_3:55013903-55013922 | None:intergenic | 30.0% | |
| CAAATCCTATTCACATTTCA+AGG | - | chr5_3:55014268-55014287 | Msa0818910:intron | 30.0% | |
| TTAGTGCATGTTTGAATTTG+CGG | + | chr5_3:55014334-55014353 | None:intergenic | 30.0% | |
| AATATGCAGAAAATTAGAGC+AGG | + | chr5_3:55014507-55014526 | None:intergenic | 30.0% | |
| CATCATTTGCAAAATGACTA+AGG | + | chr5_3:55014553-55014572 | None:intergenic | 30.0% | |
| AAAAAGCTTAATGCAGAAGA+AGG | - | chr5_3:55014665-55014684 | Msa0818910:intron | 30.0% | |
| GGTCAAATAATTAATCACCT+CGG | + | chr5_3:55014874-55014893 | None:intergenic | 30.0% | |
| !! | TTATTTGACCTTACTTTTCC+CGG | - | chr5_3:55014884-55014903 | Msa0818910:intron | 30.0% |
| ! | TGAAAGCCTTTTGTATCAAT+AGG | + | chr5_3:55015112-55015131 | None:intergenic | 30.0% |
| AATGTATGAAGATAGACTCA+TGG | - | chr5_3:55015413-55015432 | Msa0818910:intron | 30.0% | |
| ATGTATGAAGATAGACTCAT+GGG | - | chr5_3:55015414-55015433 | Msa0818910:intron | 30.0% | |
| ! | CATCTCTTTAACTTTGTCTA+GGG | + | chr5_3:55015476-55015495 | None:intergenic | 30.0% |
| ! | ATCAACATTCAGTCTTTTTC+TGG | + | chr5_3:55015529-55015548 | None:intergenic | 30.0% |
| ACATGGTCAACAAGATTATT+AGG | + | chr5_3:55015553-55015572 | None:intergenic | 30.0% | |
| CATGATAGTATGGTAGATAT+GGG | - | chr5_3:55015704-55015723 | Msa0818910:CDS | 30.0% | |
| TTGACTAAAAGAACATCAAG+TGG | + | chr5_3:55011495-55011514 | None:intergenic | 30.0% | |
| CCTCATTAGCAAAAAAATTG+TGG | + | chr5_3:55011671-55011690 | None:intergenic | 30.0% | |
| !!! | CCACAATTTTTTTGCTAATG+AGG | - | chr5_3:55011668-55011687 | Msa0818910:three_prime_UTR | 30.0% |
| GAGTTAATGACATATGACTA+AGG | + | chr5_3:55011704-55011723 | None:intergenic | 30.0% | |
| ATGTAACAATGTCGATGAAT+CGG | + | chr5_3:55011859-55011878 | None:intergenic | 30.0% | |
| !!! | ACGCTGGTTTTTAAAATGAA+GGG | + | chr5_3:55012036-55012055 | None:intergenic | 30.0% |
| !!! | AACGCTGGTTTTTAAAATGA+AGG | + | chr5_3:55012037-55012056 | None:intergenic | 30.0% |
| !! | TCATTTTAAAAACCAGCGTT+TGG | - | chr5_3:55012037-55012056 | Msa0818910:intron | 30.0% |
| AGTTTGGAAAACTTGAAACA+AGG | + | chr5_3:55012067-55012086 | None:intergenic | 30.0% | |
| !!! | GGAAGGTTTTAAAATAGGAT+TGG | + | chr5_3:55012097-55012116 | None:intergenic | 30.0% |
| ! | AGGATTGATAGTAAAATGGA+AGG | + | chr5_3:55012114-55012133 | None:intergenic | 30.0% |
| !!! | TAGGATCAATTTTGACTTGA+CGG | - | chr5_3:55012138-55012157 | Msa0818910:CDS | 30.0% |
| !!! | GCATGATGCAATCTTATTTT+AGG | - | chr5_3:55012160-55012179 | Msa0818910:CDS | 30.0% |
| ! | TTTCCACCTAATCCTATTTT+AGG | - | chr5_3:55012189-55012208 | Msa0818910:intron | 30.0% |
| CTTCATCCTAAAATAGGATT+AGG | + | chr5_3:55012198-55012217 | None:intergenic | 30.0% | |
| AAAGTGATGATCACGATTAA+GGG | + | chr5_3:55012604-55012623 | None:intergenic | 30.0% | |
| AAAAGTGATGATCACGATTA+AGG | + | chr5_3:55012605-55012624 | None:intergenic | 30.0% | |
| ! | CAATGATTTTGAACCTTACT+AGG | + | chr5_3:55012969-55012988 | None:intergenic | 30.0% |
| GGTTCAAAATCATTGTTCTT+TGG | - | chr5_3:55012974-55012993 | Msa0818910:intron | 30.0% | |
| !! | AAAATATATAGGGTTAGCCT+TGG | + | chr5_3:55013012-55013031 | None:intergenic | 30.0% |
| TTTACCAAAGGACCTTAAAT+AGG | - | chr5_3:55013053-55013072 | Msa0818910:intron | 30.0% | |
| TTACCAAAGGACCTTAAATA+GGG | - | chr5_3:55013054-55013073 | Msa0818910:intron | 30.0% | |
| TGAAAGACTTTCCCTATTTA+AGG | + | chr5_3:55013068-55013087 | None:intergenic | 30.0% | |
| TAAATAGGGAAAGTCTTTCA+TGG | - | chr5_3:55013068-55013087 | Msa0818910:intron | 30.0% | |
| ! | TTTTGACACTTATTTAAGGG+AGG | + | chr5_3:55013268-55013287 | None:intergenic | 30.0% |
| TCCCTTAAATAAGTGTCAAA+AGG | - | chr5_3:55013267-55013286 | Msa0818910:CDS | 30.0% | |
| TGTCAAAAGGATGATCTTTA+AGG | - | chr5_3:55013280-55013299 | Msa0818910:CDS | 30.0% | |
| ! | ACATGATTGGCTAATAGAAA+GGG | + | chr5_3:55013584-55013603 | None:intergenic | 30.0% |
| ! | AATTCACCTTCTCTGAAAAT+TGG | - | chr5_3:55013606-55013625 | Msa0818910:CDS | 30.0% |
| AAAATTGGCATAGTTGGATT+TGG | - | chr5_3:55013621-55013640 | Msa0818910:CDS | 30.0% | |
| ! | ATCCATTCTGTCTTTTTCTA+AGG | - | chr5_3:55013898-55013917 | Msa0818910:intron | 30.0% |
| AACCTTAGAAAAAGACAGAA+TGG | + | chr5_3:55013903-55013922 | None:intergenic | 30.0% | |
| CAAATCCTATTCACATTTCA+AGG | - | chr5_3:55014268-55014287 | Msa0818910:intron | 30.0% | |
| TTAGTGCATGTTTGAATTTG+CGG | + | chr5_3:55014334-55014353 | None:intergenic | 30.0% | |
| AATATGCAGAAAATTAGAGC+AGG | + | chr5_3:55014507-55014526 | None:intergenic | 30.0% | |
| CATCATTTGCAAAATGACTA+AGG | + | chr5_3:55014553-55014572 | None:intergenic | 30.0% | |
| AAAAAGCTTAATGCAGAAGA+AGG | - | chr5_3:55014665-55014684 | Msa0818910:intron | 30.0% | |
| GGTCAAATAATTAATCACCT+CGG | + | chr5_3:55014874-55014893 | None:intergenic | 30.0% | |
| !! | TTATTTGACCTTACTTTTCC+CGG | - | chr5_3:55014884-55014903 | Msa0818910:intron | 30.0% |
| ! | TGAAAGCCTTTTGTATCAAT+AGG | + | chr5_3:55015112-55015131 | None:intergenic | 30.0% |
| AATGTATGAAGATAGACTCA+TGG | - | chr5_3:55015413-55015432 | Msa0818910:intron | 30.0% | |
| ATGTATGAAGATAGACTCAT+GGG | - | chr5_3:55015414-55015433 | Msa0818910:intron | 30.0% | |
| ! | CATCTCTTTAACTTTGTCTA+GGG | + | chr5_3:55015476-55015495 | None:intergenic | 30.0% |
| ! | ATCAACATTCAGTCTTTTTC+TGG | + | chr5_3:55015529-55015548 | None:intergenic | 30.0% |
| ACATGGTCAACAAGATTATT+AGG | + | chr5_3:55015553-55015572 | None:intergenic | 30.0% | |
| CATGATAGTATGGTAGATAT+GGG | - | chr5_3:55015704-55015723 | Msa0818910:CDS | 30.0% | |
| ! | ATTCATTCTCTCTTTTTCCG+AGG | - | chr5_3:55011430-55011449 | Msa0818910:three_prime_UTR | 35.0% |
| AAAAGAACATCAAGTGGTGT+TGG | + | chr5_3:55011489-55011508 | None:intergenic | 35.0% | |
| GTGAATTGACACAACATGAA+TGG | - | chr5_3:55011790-55011809 | Msa0818910:intron | 35.0% | |
| !!! | GGTTTTAAAATAGGATTGGG+TGG | + | chr5_3:55012093-55012112 | None:intergenic | 35.0% |
| AATAGGATTAGGTGGAAAAG+TGG | + | chr5_3:55012187-55012206 | None:intergenic | 35.0% | |
| CATCCTAAAATAGGATTAGG+TGG | + | chr5_3:55012195-55012214 | None:intergenic | 35.0% | |
| ! | TCAATGTGGTATCTAGAGTT+TGG | - | chr5_3:55012857-55012876 | Msa0818910:CDS | 35.0% |
| AAAAGCGACGAGACAATTTA+AGG | + | chr5_3:55012892-55012911 | None:intergenic | 35.0% | |
| ! | TTTCCCTATTTAAGGTCCTT+TGG | + | chr5_3:55013060-55013079 | None:intergenic | 35.0% |
| ! | TTATTTAAGGGAGGTACACT+TGG | + | chr5_3:55013259-55013278 | None:intergenic | 35.0% |
| ! | GACATGATTGGCTAATAGAA+AGG | + | chr5_3:55013585-55013604 | None:intergenic | 35.0% |
| GAAGGTGAATTTGACATGAT+TGG | + | chr5_3:55013597-55013616 | None:intergenic | 35.0% | |
| ! | ACTATGCCAATTTTCAGAGA+AGG | + | chr5_3:55013615-55013634 | None:intergenic | 35.0% |
| ! | TCTCTGAAAATTGGCATAGT+TGG | - | chr5_3:55013615-55013634 | Msa0818910:CDS | 35.0% |
| ! | ATAGTTGGATTTGGTTCCTT+TGG | - | chr5_3:55013630-55013649 | Msa0818910:CDS | 35.0% |
| GCAAAGACTATGATCAAACA+AGG | - | chr5_3:55013663-55013682 | Msa0818910:intron | 35.0% | |
| TGAAGAATTGAATGCCCAAT+TGG | + | chr5_3:55013737-55013756 | None:intergenic | 35.0% | |
| AATTGGGCATTCAATTCTTC+AGG | - | chr5_3:55013736-55013755 | Msa0818910:intron | 35.0% | |
| GGATGTTAGAACATTCATTG+AGG | - | chr5_3:55013847-55013866 | Msa0818910:intron | 35.0% | |
| TATGAGTATGACATCGTTGT+TGG | + | chr5_3:55013873-55013892 | None:intergenic | 35.0% | |
| GTTCTCAGTTCTATGTCATT+TGG | - | chr5_3:55013920-55013939 | Msa0818910:intron | 35.0% | |
| !! | ACATCAACAAAGAGTGTTGT+TGG | + | chr5_3:55013959-55013978 | None:intergenic | 35.0% |
| ! | ACCCAAGAGAACTTTTATTG+CGG | - | chr5_3:55013996-55014015 | Msa0818910:intron | 35.0% |
| ! | TGTCATTTCTTCTGAGTAGA+AGG | - | chr5_3:55014039-55014058 | Msa0818910:intron | 35.0% |
| TGTATATGTTAAGTCCGTGT+CGG | + | chr5_3:55014094-55014113 | None:intergenic | 35.0% | |
| TTGCCATCATATTGTGCTAT+TGG | + | chr5_3:55014251-55014270 | None:intergenic | 35.0% | |
| AGTGTCCTTGAAATGTGAAT+AGG | + | chr5_3:55014276-55014295 | None:intergenic | 35.0% | |
| CATTTCAAGGACACTATGTT+TGG | - | chr5_3:55014281-55014300 | Msa0818910:intron | 35.0% | |
| AACATGCACTAATACTCATC+CGG | - | chr5_3:55014342-55014361 | Msa0818910:intron | 35.0% | |
| AGAACCTGTTAGGAAAACAT+AGG | + | chr5_3:55014368-55014387 | None:intergenic | 35.0% | |
| !! | TCTGCATATTTTTGCTAGTG+AGG | - | chr5_3:55014517-55014536 | Msa0818910:intron | 35.0% |
| GATATTGGGGTAAAACTAAC+TGG | + | chr5_3:55014590-55014609 | None:intergenic | 35.0% | |
| AAGAAGGAATCACATCTGAT+AGG | - | chr5_3:55014681-55014700 | Msa0818910:intron | 35.0% | |
| AGGAAAATGACTTATGAACG+AGG | - | chr5_3:55014701-55014720 | Msa0818910:intron | 35.0% | |
| !! | ATATGTTGAAAACTTGCTGC+AGG | + | chr5_3:55014772-55014791 | None:intergenic | 35.0% |
| TTATAACACACACTATAGGC+AGG | - | chr5_3:55014972-55014991 | Msa0818910:intron | 35.0% | |
| TATTAGGACATTGGCAGAAA+TGG | - | chr5_3:55015072-55015091 | Msa0818910:intron | 35.0% | |
| TCCACACCTATTGATACAAA+AGG | - | chr5_3:55015103-55015122 | Msa0818910:intron | 35.0% | |
| CTTTCAAACACTTACTCAAC+TGG | - | chr5_3:55015126-55015145 | Msa0818910:intron | 35.0% | |
| GTTAATTAATCGCAGATTGG+AGG | + | chr5_3:55015192-55015211 | None:intergenic | 35.0% | |
| ATCAAAACTATCTCTCATGG+TGG | + | chr5_3:55015242-55015261 | None:intergenic | 35.0% | |
| CAGATCAAAACTATCTCTCA+TGG | + | chr5_3:55015245-55015264 | None:intergenic | 35.0% | |
| !!! | GATAGTTTTGATCTGTACAG+TGG | - | chr5_3:55015250-55015269 | Msa0818910:intron | 35.0% |
| ! | GCATCTCTTTAACTTTGTCT+AGG | + | chr5_3:55015477-55015496 | None:intergenic | 35.0% |
| AGACAAAGTTAAAGAGATGC+TGG | - | chr5_3:55015477-55015496 | Msa0818910:intron | 35.0% | |
| !! | TTAAAGAGATGCTGGTTCAA+AGG | - | chr5_3:55015485-55015504 | Msa0818910:intron | 35.0% |
| GACTGTAAGAATTGCAAGAA+AGG | + | chr5_3:55015609-55015628 | None:intergenic | 35.0% | |
| CAGCCATTACTTGATCATTA+TGG | - | chr5_3:55015639-55015658 | Msa0818910:CDS | 35.0% | |
| AATTGTGAATGTGTCAGCTA+TGG | - | chr5_3:55015676-55015695 | Msa0818910:CDS | 35.0% | |
| GCATGATAGTATGGTAGATA+TGG | - | chr5_3:55015703-55015722 | Msa0818910:CDS | 35.0% | |
| ! | TTTTGTTAGGAAGGGTTCTA+AGG | - | chr5_3:55015778-55015797 | Msa0818910:CDS | 35.0% |
| ! | ATTCATTCTCTCTTTTTCCG+AGG | - | chr5_3:55011430-55011449 | Msa0818910:three_prime_UTR | 35.0% |
| AAAAGAACATCAAGTGGTGT+TGG | + | chr5_3:55011489-55011508 | None:intergenic | 35.0% | |
| GTGAATTGACACAACATGAA+TGG | - | chr5_3:55011790-55011809 | Msa0818910:intron | 35.0% | |
| !!! | GGTTTTAAAATAGGATTGGG+TGG | + | chr5_3:55012093-55012112 | None:intergenic | 35.0% |
| AATAGGATTAGGTGGAAAAG+TGG | + | chr5_3:55012187-55012206 | None:intergenic | 35.0% | |
| CATCCTAAAATAGGATTAGG+TGG | + | chr5_3:55012195-55012214 | None:intergenic | 35.0% | |
| ! | TCAATGTGGTATCTAGAGTT+TGG | - | chr5_3:55012857-55012876 | Msa0818910:CDS | 35.0% |
| AAAAGCGACGAGACAATTTA+AGG | + | chr5_3:55012892-55012911 | None:intergenic | 35.0% | |
| ! | TTTCCCTATTTAAGGTCCTT+TGG | + | chr5_3:55013060-55013079 | None:intergenic | 35.0% |
| ! | TTATTTAAGGGAGGTACACT+TGG | + | chr5_3:55013259-55013278 | None:intergenic | 35.0% |
| ! | GACATGATTGGCTAATAGAA+AGG | + | chr5_3:55013585-55013604 | None:intergenic | 35.0% |
| GAAGGTGAATTTGACATGAT+TGG | + | chr5_3:55013597-55013616 | None:intergenic | 35.0% | |
| ! | ACTATGCCAATTTTCAGAGA+AGG | + | chr5_3:55013615-55013634 | None:intergenic | 35.0% |
| ! | TCTCTGAAAATTGGCATAGT+TGG | - | chr5_3:55013615-55013634 | Msa0818910:CDS | 35.0% |
| ! | ATAGTTGGATTTGGTTCCTT+TGG | - | chr5_3:55013630-55013649 | Msa0818910:CDS | 35.0% |
| GCAAAGACTATGATCAAACA+AGG | - | chr5_3:55013663-55013682 | Msa0818910:intron | 35.0% | |
| TGAAGAATTGAATGCCCAAT+TGG | + | chr5_3:55013737-55013756 | None:intergenic | 35.0% | |
| AATTGGGCATTCAATTCTTC+AGG | - | chr5_3:55013736-55013755 | Msa0818910:intron | 35.0% | |
| GGATGTTAGAACATTCATTG+AGG | - | chr5_3:55013847-55013866 | Msa0818910:intron | 35.0% | |
| TATGAGTATGACATCGTTGT+TGG | + | chr5_3:55013873-55013892 | None:intergenic | 35.0% | |
| GTTCTCAGTTCTATGTCATT+TGG | - | chr5_3:55013920-55013939 | Msa0818910:intron | 35.0% | |
| !! | ACATCAACAAAGAGTGTTGT+TGG | + | chr5_3:55013959-55013978 | None:intergenic | 35.0% |
| ! | ACCCAAGAGAACTTTTATTG+CGG | - | chr5_3:55013996-55014015 | Msa0818910:intron | 35.0% |
| ! | TGTCATTTCTTCTGAGTAGA+AGG | - | chr5_3:55014039-55014058 | Msa0818910:intron | 35.0% |
| TGTATATGTTAAGTCCGTGT+CGG | + | chr5_3:55014094-55014113 | None:intergenic | 35.0% | |
| TTGCCATCATATTGTGCTAT+TGG | + | chr5_3:55014251-55014270 | None:intergenic | 35.0% | |
| AGTGTCCTTGAAATGTGAAT+AGG | + | chr5_3:55014276-55014295 | None:intergenic | 35.0% | |
| CATTTCAAGGACACTATGTT+TGG | - | chr5_3:55014281-55014300 | Msa0818910:intron | 35.0% | |
| AACATGCACTAATACTCATC+CGG | - | chr5_3:55014342-55014361 | Msa0818910:intron | 35.0% | |
| AGAACCTGTTAGGAAAACAT+AGG | + | chr5_3:55014368-55014387 | None:intergenic | 35.0% | |
| !! | TCTGCATATTTTTGCTAGTG+AGG | - | chr5_3:55014517-55014536 | Msa0818910:intron | 35.0% |
| GATATTGGGGTAAAACTAAC+TGG | + | chr5_3:55014590-55014609 | None:intergenic | 35.0% | |
| AAGAAGGAATCACATCTGAT+AGG | - | chr5_3:55014681-55014700 | Msa0818910:intron | 35.0% | |
| AGGAAAATGACTTATGAACG+AGG | - | chr5_3:55014701-55014720 | Msa0818910:intron | 35.0% | |
| !! | ATATGTTGAAAACTTGCTGC+AGG | + | chr5_3:55014772-55014791 | None:intergenic | 35.0% |
| TTATAACACACACTATAGGC+AGG | - | chr5_3:55014972-55014991 | Msa0818910:intron | 35.0% | |
| TATTAGGACATTGGCAGAAA+TGG | - | chr5_3:55015072-55015091 | Msa0818910:intron | 35.0% | |
| TCCACACCTATTGATACAAA+AGG | - | chr5_3:55015103-55015122 | Msa0818910:intron | 35.0% | |
| CTTTCAAACACTTACTCAAC+TGG | - | chr5_3:55015126-55015145 | Msa0818910:intron | 35.0% | |
| GTTAATTAATCGCAGATTGG+AGG | + | chr5_3:55015192-55015211 | None:intergenic | 35.0% | |
| ATCAAAACTATCTCTCATGG+TGG | + | chr5_3:55015242-55015261 | None:intergenic | 35.0% | |
| CAGATCAAAACTATCTCTCA+TGG | + | chr5_3:55015245-55015264 | None:intergenic | 35.0% | |
| !!! | GATAGTTTTGATCTGTACAG+TGG | - | chr5_3:55015250-55015269 | Msa0818910:intron | 35.0% |
| ! | GCATCTCTTTAACTTTGTCT+AGG | + | chr5_3:55015477-55015496 | None:intergenic | 35.0% |
| AGACAAAGTTAAAGAGATGC+TGG | - | chr5_3:55015477-55015496 | Msa0818910:intron | 35.0% | |
| !! | TTAAAGAGATGCTGGTTCAA+AGG | - | chr5_3:55015485-55015504 | Msa0818910:intron | 35.0% |
| GACTGTAAGAATTGCAAGAA+AGG | + | chr5_3:55015609-55015628 | None:intergenic | 35.0% | |
| CAGCCATTACTTGATCATTA+TGG | - | chr5_3:55015639-55015658 | Msa0818910:CDS | 35.0% | |
| AATTGTGAATGTGTCAGCTA+TGG | - | chr5_3:55015676-55015695 | Msa0818910:CDS | 35.0% | |
| GCATGATAGTATGGTAGATA+TGG | - | chr5_3:55015703-55015722 | Msa0818910:CDS | 35.0% | |
| ! | TTTTGTTAGGAAGGGTTCTA+AGG | - | chr5_3:55015778-55015797 | Msa0818910:CDS | 35.0% |
| TATACTCTGCACACACCTAA+TGG | - | chr5_3:55011554-55011573 | Msa0818910:three_prime_UTR | 40.0% | |
| AAACAAGGAATACCAAACGC+TGG | + | chr5_3:55012052-55012071 | None:intergenic | 40.0% | |
| TAGGATTGGGTGGAAAAGTT+TGG | + | chr5_3:55012083-55012102 | None:intergenic | 40.0% | |
| GCTGCACATCATTTATGATC+TGG | - | chr5_3:55012327-55012346 | Msa0818910:CDS | 40.0% | |
| ACCTCAAAATAGAATGAGGG+TGG | - | chr5_3:55012367-55012386 | Msa0818910:intron | 40.0% | |
| ! | TCCACCCTCATTCTATTTTG+AGG | + | chr5_3:55012371-55012390 | None:intergenic | 40.0% |
| AGAATGAGGGTGGAAAAGTT+AGG | - | chr5_3:55012377-55012396 | Msa0818910:intron | 40.0% | |
| !! | AAGTGTCTGAGAGGTGTTTA+AGG | - | chr5_3:55012649-55012668 | Msa0818910:intron | 40.0% |
| !! | TAGAAGTGTCATACACGTGT+CGG | - | chr5_3:55012734-55012753 | Msa0818910:CDS | 40.0% |
| TTTGGATTAAGCTATCGCCA+AGG | - | chr5_3:55012992-55013011 | Msa0818910:intron | 40.0% | |
| TGGTTCCTTTGGTCAATTTC+TGG | - | chr5_3:55013641-55013660 | Msa0818910:CDS | 40.0% | |
| CTTTGCCAGAAATTGACCAA+AGG | + | chr5_3:55013649-55013668 | None:intergenic | 40.0% | |
| TTGAAGTTGCAGTTAGAGTG+TGG | + | chr5_3:55013689-55013708 | None:intergenic | 40.0% | |
| TCTCACACATGTCTCCAATT+GGG | - | chr5_3:55013720-55013739 | Msa0818910:intron | 40.0% | |
| CCCGCAATAAAAGTTCTCTT+GGG | + | chr5_3:55014000-55014019 | None:intergenic | 40.0% | |
| ! | CCCAAGAGAACTTTTATTGC+GGG | - | chr5_3:55013997-55014016 | Msa0818910:intron | 40.0% |
| ACCCGCAATAAAAGTTCTCT+TGG | + | chr5_3:55014001-55014020 | None:intergenic | 40.0% | |
| TGTCGGATACCTACATTTGT+CGG | + | chr5_3:55014077-55014096 | None:intergenic | 40.0% | |
| ACAAATGTAGGTATCCGACA+CGG | - | chr5_3:55014077-55014096 | Msa0818910:intron | 40.0% | |
| CTGCCAATAGCACAATATGA+TGG | - | chr5_3:55014245-55014264 | Msa0818910:intron | 40.0% | |
| ! | GGACACTATGTTTGGAATCA+CGG | - | chr5_3:55014289-55014308 | Msa0818910:intron | 40.0% |
| ! | CACTTTCTGGTCCAAACATT+GGG | + | chr5_3:55014421-55014440 | None:intergenic | 40.0% |
| GACCAGAAAGTGGAAAGAAT+GGG | - | chr5_3:55014429-55014448 | Msa0818910:intron | 40.0% | |
| TTGTGACTCACATTTATCCG+AGG | - | chr5_3:55014854-55014873 | Msa0818910:intron | 40.0% | |
| TACTGATATACATGCTCAGC+AGG | - | chr5_3:55015027-55015046 | Msa0818910:intron | 40.0% | |
| ! | GCCTTTTGTATCAATAGGTG+TGG | + | chr5_3:55015107-55015126 | None:intergenic | 40.0% |
| TAACAGATTCGCTAAGCAAG+AGG | - | chr5_3:55015285-55015304 | Msa0818910:intron | 40.0% | |
| GGTTGTGTCAAATATACAGC+TGG | - | chr5_3:55015435-55015454 | Msa0818910:intron | 40.0% | |
| TATGGTGTGGCATGATAGTA+TGG | - | chr5_3:55015694-55015713 | Msa0818910:CDS | 40.0% | |
| TCCAAGTCACTCTCTCTATT+GGG | + | chr5_3:55015736-55015755 | None:intergenic | 40.0% | |
| TTCCAAGTCACTCTCTCTAT+TGG | + | chr5_3:55015737-55015756 | None:intergenic | 40.0% | |
| CTTGGAAAGTAGGAATGACA+CGG | - | chr5_3:55015750-55015769 | Msa0818910:CDS | 40.0% | |
| !! | TGACACGGCAATGTTTTGTT+AGG | - | chr5_3:55015765-55015784 | Msa0818910:CDS | 40.0% |
| !! | ACGGCAATGTTTTGTTAGGA+AGG | - | chr5_3:55015769-55015788 | Msa0818910:CDS | 40.0% |
| !! | CGGCAATGTTTTGTTAGGAA+GGG | - | chr5_3:55015770-55015789 | Msa0818910:CDS | 40.0% |
| TATACTCTGCACACACCTAA+TGG | - | chr5_3:55011554-55011573 | Msa0818910:three_prime_UTR | 40.0% | |
| AAACAAGGAATACCAAACGC+TGG | + | chr5_3:55012052-55012071 | None:intergenic | 40.0% | |
| TAGGATTGGGTGGAAAAGTT+TGG | + | chr5_3:55012083-55012102 | None:intergenic | 40.0% | |
| GCTGCACATCATTTATGATC+TGG | - | chr5_3:55012327-55012346 | Msa0818910:CDS | 40.0% | |
| ACCTCAAAATAGAATGAGGG+TGG | - | chr5_3:55012367-55012386 | Msa0818910:intron | 40.0% | |
| ! | TCCACCCTCATTCTATTTTG+AGG | + | chr5_3:55012371-55012390 | None:intergenic | 40.0% |
| AGAATGAGGGTGGAAAAGTT+AGG | - | chr5_3:55012377-55012396 | Msa0818910:intron | 40.0% | |
| !! | AAGTGTCTGAGAGGTGTTTA+AGG | - | chr5_3:55012649-55012668 | Msa0818910:intron | 40.0% |
| !! | TAGAAGTGTCATACACGTGT+CGG | - | chr5_3:55012734-55012753 | Msa0818910:CDS | 40.0% |
| TTTGGATTAAGCTATCGCCA+AGG | - | chr5_3:55012992-55013011 | Msa0818910:intron | 40.0% | |
| TGGTTCCTTTGGTCAATTTC+TGG | - | chr5_3:55013641-55013660 | Msa0818910:CDS | 40.0% | |
| CTTTGCCAGAAATTGACCAA+AGG | + | chr5_3:55013649-55013668 | None:intergenic | 40.0% | |
| TTGAAGTTGCAGTTAGAGTG+TGG | + | chr5_3:55013689-55013708 | None:intergenic | 40.0% | |
| TCTCACACATGTCTCCAATT+GGG | - | chr5_3:55013720-55013739 | Msa0818910:intron | 40.0% | |
| CCCGCAATAAAAGTTCTCTT+GGG | + | chr5_3:55014000-55014019 | None:intergenic | 40.0% | |
| ! | CCCAAGAGAACTTTTATTGC+GGG | - | chr5_3:55013997-55014016 | Msa0818910:intron | 40.0% |
| ACCCGCAATAAAAGTTCTCT+TGG | + | chr5_3:55014001-55014020 | None:intergenic | 40.0% | |
| TGTCGGATACCTACATTTGT+CGG | + | chr5_3:55014077-55014096 | None:intergenic | 40.0% | |
| ACAAATGTAGGTATCCGACA+CGG | - | chr5_3:55014077-55014096 | Msa0818910:intron | 40.0% | |
| CTGCCAATAGCACAATATGA+TGG | - | chr5_3:55014245-55014264 | Msa0818910:intron | 40.0% | |
| ! | GGACACTATGTTTGGAATCA+CGG | - | chr5_3:55014289-55014308 | Msa0818910:intron | 40.0% |
| ! | CACTTTCTGGTCCAAACATT+GGG | + | chr5_3:55014421-55014440 | None:intergenic | 40.0% |
| GACCAGAAAGTGGAAAGAAT+GGG | - | chr5_3:55014429-55014448 | Msa0818910:intron | 40.0% | |
| TTGTGACTCACATTTATCCG+AGG | - | chr5_3:55014854-55014873 | Msa0818910:intron | 40.0% | |
| TACTGATATACATGCTCAGC+AGG | - | chr5_3:55015027-55015046 | Msa0818910:intron | 40.0% | |
| ! | GCCTTTTGTATCAATAGGTG+TGG | + | chr5_3:55015107-55015126 | None:intergenic | 40.0% |
| TAACAGATTCGCTAAGCAAG+AGG | - | chr5_3:55015285-55015304 | Msa0818910:intron | 40.0% | |
| GGTTGTGTCAAATATACAGC+TGG | - | chr5_3:55015435-55015454 | Msa0818910:intron | 40.0% | |
| TATGGTGTGGCATGATAGTA+TGG | - | chr5_3:55015694-55015713 | Msa0818910:CDS | 40.0% | |
| TCCAAGTCACTCTCTCTATT+GGG | + | chr5_3:55015736-55015755 | None:intergenic | 40.0% | |
| TTCCAAGTCACTCTCTCTAT+TGG | + | chr5_3:55015737-55015756 | None:intergenic | 40.0% | |
| CTTGGAAAGTAGGAATGACA+CGG | - | chr5_3:55015750-55015769 | Msa0818910:CDS | 40.0% | |
| !! | TGACACGGCAATGTTTTGTT+AGG | - | chr5_3:55015765-55015784 | Msa0818910:CDS | 40.0% |
| !! | ACGGCAATGTTTTGTTAGGA+AGG | - | chr5_3:55015769-55015788 | Msa0818910:CDS | 40.0% |
| !! | CGGCAATGTTTTGTTAGGAA+GGG | - | chr5_3:55015770-55015789 | Msa0818910:CDS | 40.0% |
| CGCTTAAGACAAGCACATGA+CGG | + | chr5_3:55011465-55011484 | None:intergenic | 45.0% | |
| TCTGGTAGTAAGAGGTCTCT+TGG | + | chr5_3:55011525-55011544 | None:intergenic | 45.0% | |
| CTGACTCTTCTGGTAGTAAG+AGG | + | chr5_3:55011533-55011552 | None:intergenic | 45.0% | |
| CTCTTACTACCAGAAGAGTC+AGG | - | chr5_3:55011531-55011550 | Msa0818910:three_prime_UTR | 45.0% | |
| CAGAGTATACCTGACTCTTC+TGG | + | chr5_3:55011543-55011562 | None:intergenic | 45.0% | |
| AATGATGTGCAGCGTTCAAC+TGG | + | chr5_3:55012320-55012339 | None:intergenic | 45.0% | |
| ACACCTCTCAGACACTTTCA+CGG | + | chr5_3:55012646-55012665 | None:intergenic | 45.0% | |
| ACCGACGTGTATCAAAGAGA+GGG | - | chr5_3:55012759-55012778 | Msa0818910:CDS | 45.0% | |
| TCCCTCTCTTTGATACACGT+CGG | + | chr5_3:55012763-55012782 | None:intergenic | 45.0% | |
| !!! | GTCGCTTTTCTTTTCTGTCG+TGG | - | chr5_3:55012903-55012922 | Msa0818910:intron | 45.0% |
| TTTCTGTCGTGGTTCCCAAA+CGG | - | chr5_3:55012914-55012933 | Msa0818910:intron | 45.0% | |
| ! | TTAAGGGAGGTACACTTGGT+TGG | + | chr5_3:55013255-55013274 | None:intergenic | 45.0% |
| CTCTCACACATGTCTCCAAT+TGG | - | chr5_3:55013719-55013738 | Msa0818910:intron | 45.0% | |
| TGAAGCACACACATGTACAC+TGG | + | chr5_3:55014212-55014231 | None:intergenic | 45.0% | |
| ! | CACTATGTTTGGAATCACGG+TGG | - | chr5_3:55014292-55014311 | Msa0818910:intron | 45.0% |
| CCTGTTAGGAAAACATAGGC+CGG | + | chr5_3:55014364-55014383 | None:intergenic | 45.0% | |
| CAGAGTATATCTGACTCCTC+TGG | + | chr5_3:55014392-55014411 | None:intergenic | 45.0% | |
| ! | CCACTTTCTGGTCCAAACAT+TGG | + | chr5_3:55014422-55014441 | None:intergenic | 45.0% |
| CCAATGTTTGGACCAGAAAG+TGG | - | chr5_3:55014419-55014438 | Msa0818910:intron | 45.0% | |
| GGACCAGAAAGTGGAAAGAA+TGG | - | chr5_3:55014428-55014447 | Msa0818910:intron | 45.0% | |
| CACCCATTCTTTCCACTTTC+TGG | + | chr5_3:55014434-55014453 | None:intergenic | 45.0% | |
| CAGAAAGTGGAAAGAATGGG+TGG | - | chr5_3:55014432-55014451 | Msa0818910:intron | 45.0% | |
| TAGCATCTTACAACCCTGTC+CGG | + | chr5_3:55014906-55014925 | None:intergenic | 45.0% | |
| AACACACACTATAGGCAGGT+AGG | - | chr5_3:55014976-55014995 | Msa0818910:intron | 45.0% | |
| CGCAGATTGGAGGAAGAATA+GGG | + | chr5_3:55015182-55015201 | None:intergenic | 45.0% | |
| TCGCAGATTGGAGGAAGAAT+AGG | + | chr5_3:55015183-55015202 | None:intergenic | 45.0% | |
| GATTCGCTAAGCAAGAGGTA+CGG | - | chr5_3:55015290-55015309 | Msa0818910:intron | 45.0% | |
| ! | TAACTTTGTCTAGGGCACGT+TGG | + | chr5_3:55015468-55015487 | None:intergenic | 45.0% |
| TGAATGTGTCAGCTATGGTG+TGG | - | chr5_3:55015681-55015700 | Msa0818910:CDS | 45.0% | |
| ! | GAGAGAGTGACTTGGAAAGT+AGG | - | chr5_3:55015740-55015759 | Msa0818910:CDS | 45.0% |
| !! | AGGGTTCTAAGGACACAATG+AGG | - | chr5_3:55015789-55015808 | Msa0818910:CDS | 45.0% |
| GGACACAATGAGGAATGTGA+AGG | - | chr5_3:55015799-55015818 | Msa0818910:CDS | 45.0% | |
| CGCTTAAGACAAGCACATGA+CGG | + | chr5_3:55011465-55011484 | None:intergenic | 45.0% | |
| TCTGGTAGTAAGAGGTCTCT+TGG | + | chr5_3:55011525-55011544 | None:intergenic | 45.0% | |
| CTGACTCTTCTGGTAGTAAG+AGG | + | chr5_3:55011533-55011552 | None:intergenic | 45.0% | |
| CTCTTACTACCAGAAGAGTC+AGG | - | chr5_3:55011531-55011550 | Msa0818910:three_prime_UTR | 45.0% | |
| CAGAGTATACCTGACTCTTC+TGG | + | chr5_3:55011543-55011562 | None:intergenic | 45.0% | |
| AATGATGTGCAGCGTTCAAC+TGG | + | chr5_3:55012320-55012339 | None:intergenic | 45.0% | |
| ACACCTCTCAGACACTTTCA+CGG | + | chr5_3:55012646-55012665 | None:intergenic | 45.0% | |
| ACCGACGTGTATCAAAGAGA+GGG | - | chr5_3:55012759-55012778 | Msa0818910:CDS | 45.0% | |
| TCCCTCTCTTTGATACACGT+CGG | + | chr5_3:55012763-55012782 | None:intergenic | 45.0% | |
| !!! | GTCGCTTTTCTTTTCTGTCG+TGG | - | chr5_3:55012903-55012922 | Msa0818910:intron | 45.0% |
| TTTCTGTCGTGGTTCCCAAA+CGG | - | chr5_3:55012914-55012933 | Msa0818910:intron | 45.0% | |
| ! | TTAAGGGAGGTACACTTGGT+TGG | + | chr5_3:55013255-55013274 | None:intergenic | 45.0% |
| CTCTCACACATGTCTCCAAT+TGG | - | chr5_3:55013719-55013738 | Msa0818910:intron | 45.0% | |
| TGAAGCACACACATGTACAC+TGG | + | chr5_3:55014212-55014231 | None:intergenic | 45.0% | |
| ! | CACTATGTTTGGAATCACGG+TGG | - | chr5_3:55014292-55014311 | Msa0818910:intron | 45.0% |
| CCTGTTAGGAAAACATAGGC+CGG | + | chr5_3:55014364-55014383 | None:intergenic | 45.0% | |
| CAGAGTATATCTGACTCCTC+TGG | + | chr5_3:55014392-55014411 | None:intergenic | 45.0% | |
| ! | CCACTTTCTGGTCCAAACAT+TGG | + | chr5_3:55014422-55014441 | None:intergenic | 45.0% |
| CCAATGTTTGGACCAGAAAG+TGG | - | chr5_3:55014419-55014438 | Msa0818910:intron | 45.0% | |
| GGACCAGAAAGTGGAAAGAA+TGG | - | chr5_3:55014428-55014447 | Msa0818910:intron | 45.0% | |
| CACCCATTCTTTCCACTTTC+TGG | + | chr5_3:55014434-55014453 | None:intergenic | 45.0% | |
| CAGAAAGTGGAAAGAATGGG+TGG | - | chr5_3:55014432-55014451 | Msa0818910:intron | 45.0% | |
| TAGCATCTTACAACCCTGTC+CGG | + | chr5_3:55014906-55014925 | None:intergenic | 45.0% | |
| AACACACACTATAGGCAGGT+AGG | - | chr5_3:55014976-55014995 | Msa0818910:intron | 45.0% | |
| CGCAGATTGGAGGAAGAATA+GGG | + | chr5_3:55015182-55015201 | None:intergenic | 45.0% | |
| TCGCAGATTGGAGGAAGAAT+AGG | + | chr5_3:55015183-55015202 | None:intergenic | 45.0% | |
| GATTCGCTAAGCAAGAGGTA+CGG | - | chr5_3:55015290-55015309 | Msa0818910:intron | 45.0% | |
| ! | TAACTTTGTCTAGGGCACGT+TGG | + | chr5_3:55015468-55015487 | None:intergenic | 45.0% |
| TGAATGTGTCAGCTATGGTG+TGG | - | chr5_3:55015681-55015700 | Msa0818910:CDS | 45.0% | |
| ! | GAGAGAGTGACTTGGAAAGT+AGG | - | chr5_3:55015740-55015759 | Msa0818910:CDS | 45.0% |
| !! | AGGGTTCTAAGGACACAATG+AGG | - | chr5_3:55015789-55015808 | Msa0818910:CDS | 45.0% |
| GGACACAATGAGGAATGTGA+AGG | - | chr5_3:55015799-55015818 | Msa0818910:CDS | 45.0% | |
| !!! | ATTTTATAAAATATTTTAAG+TGG | - | chr5_3:55012253-55012272 | Msa0818910:intron | 5.0% |
| !!! | ATTTCTAAAAAAAATATATA+GGG | + | chr5_3:55013022-55013041 | None:intergenic | 5.0% |
| !!! | AATTTCTAAAAAAAATATAT+AGG | + | chr5_3:55013023-55013042 | None:intergenic | 5.0% |
| !!! | TTTTGTTTATATTTATATTT+TGG | + | chr5_3:55013489-55013508 | None:intergenic | 5.0% |
| !! | ATAAATATAAACAAAAAAAA+AGG | - | chr5_3:55013493-55013512 | Msa0818910:intron | 5.0% |
| !!! | ATTTTATAAAATATTTTAAG+TGG | - | chr5_3:55012253-55012272 | Msa0818910:intron | 5.0% |
| !!! | ATTTCTAAAAAAAATATATA+GGG | + | chr5_3:55013022-55013041 | None:intergenic | 5.0% |
| !!! | AATTTCTAAAAAAAATATAT+AGG | + | chr5_3:55013023-55013042 | None:intergenic | 5.0% |
| !!! | TTTTGTTTATATTTATATTT+TGG | + | chr5_3:55013489-55013508 | None:intergenic | 5.0% |
| !! | ATAAATATAAACAAAAAAAA+AGG | - | chr5_3:55013493-55013512 | Msa0818910:intron | 5.0% |
| ! | CATGACGGAACTGAGAACCT+CGG | + | chr5_3:55011450-55011469 | None:intergenic | 50.0% |
| CTCTGCACACACCTAATGGT+TGG | - | chr5_3:55011558-55011577 | Msa0818910:three_prime_UTR | 50.0% | |
| CACTCTCTGGTCCAACCATT+AGG | + | chr5_3:55011572-55011591 | None:intergenic | 50.0% | |
| CTAATGGTTGGACCAGAGAG+TGG | - | chr5_3:55011570-55011589 | Msa0818910:three_prime_UTR | 50.0% | |
| GACCAGAGAGTGGAAAGGAT+GGG | - | chr5_3:55011580-55011599 | Msa0818910:three_prime_UTR | 50.0% | |
| !! | TTCCCGTGAAAGTGTCTGAG+AGG | - | chr5_3:55012640-55012659 | Msa0818910:intron | 50.0% |
| CACCTCTCAGACACTTTCAC+GGG | + | chr5_3:55012645-55012664 | None:intergenic | 50.0% | |
| CACCGACGTGTATCAAAGAG+AGG | - | chr5_3:55012758-55012777 | Msa0818910:CDS | 50.0% | |
| ! | TTCTGAGTAGAAGGCGTGTC+TGG | - | chr5_3:55014048-55014067 | Msa0818910:intron | 50.0% |
| GTCTGGTGTCCGACAAATGT+AGG | - | chr5_3:55014065-55014084 | Msa0818910:intron | 50.0% | |
| ! | CCGGCCTATGTTTTCCTAAC+AGG | - | chr5_3:55014361-55014380 | Msa0818910:intron | 50.0% |
| TTCCTAACAGGTTCTGCCAG+AGG | - | chr5_3:55014373-55014392 | Msa0818910:intron | 50.0% | |
| CTCTGCACACACCCAATGTT+TGG | - | chr5_3:55014407-55014426 | Msa0818910:intron | 50.0% | |
| !! | TGACCTTACTTTTCCCGGAC+AGG | - | chr5_3:55014889-55014908 | Msa0818910:intron | 50.0% |
| !! | GACCTTACTTTTCCCGGACA+GGG | - | chr5_3:55014890-55014909 | Msa0818910:intron | 50.0% |
| AACCCTGTCCGGGAAAAGTA+AGG | + | chr5_3:55014895-55014914 | None:intergenic | 50.0% | |
| AGCATCTTACAACCCTGTCC+GGG | + | chr5_3:55014905-55014924 | None:intergenic | 50.0% | |
| ! | GCTGGTTCAAAGGATGAGAG+AGG | - | chr5_3:55015495-55015514 | Msa0818910:intron | 50.0% |
| TCAAAGGATGAGAGAGGAGC+TGG | - | chr5_3:55015501-55015520 | Msa0818910:intron | 50.0% | |
| CAAAGGATGAGAGAGGAGCT+GGG | - | chr5_3:55015502-55015521 | Msa0818910:intron | 50.0% | |
| GCCCAATAGAGAGAGTGACT+TGG | - | chr5_3:55015732-55015751 | Msa0818910:CDS | 50.0% | |
| ! | CATGACGGAACTGAGAACCT+CGG | + | chr5_3:55011450-55011469 | None:intergenic | 50.0% |
| CTCTGCACACACCTAATGGT+TGG | - | chr5_3:55011558-55011577 | Msa0818910:three_prime_UTR | 50.0% | |
| CACTCTCTGGTCCAACCATT+AGG | + | chr5_3:55011572-55011591 | None:intergenic | 50.0% | |
| CTAATGGTTGGACCAGAGAG+TGG | - | chr5_3:55011570-55011589 | Msa0818910:three_prime_UTR | 50.0% | |
| GACCAGAGAGTGGAAAGGAT+GGG | - | chr5_3:55011580-55011599 | Msa0818910:three_prime_UTR | 50.0% | |
| !! | TTCCCGTGAAAGTGTCTGAG+AGG | - | chr5_3:55012640-55012659 | Msa0818910:intron | 50.0% |
| CACCTCTCAGACACTTTCAC+GGG | + | chr5_3:55012645-55012664 | None:intergenic | 50.0% | |
| CACCGACGTGTATCAAAGAG+AGG | - | chr5_3:55012758-55012777 | Msa0818910:CDS | 50.0% | |
| ! | TTCTGAGTAGAAGGCGTGTC+TGG | - | chr5_3:55014048-55014067 | Msa0818910:intron | 50.0% |
| GTCTGGTGTCCGACAAATGT+AGG | - | chr5_3:55014065-55014084 | Msa0818910:intron | 50.0% | |
| ! | CCGGCCTATGTTTTCCTAAC+AGG | - | chr5_3:55014361-55014380 | Msa0818910:intron | 50.0% |
| TTCCTAACAGGTTCTGCCAG+AGG | - | chr5_3:55014373-55014392 | Msa0818910:intron | 50.0% | |
| CTCTGCACACACCCAATGTT+TGG | - | chr5_3:55014407-55014426 | Msa0818910:intron | 50.0% | |
| !! | TGACCTTACTTTTCCCGGAC+AGG | - | chr5_3:55014889-55014908 | Msa0818910:intron | 50.0% |
| !! | GACCTTACTTTTCCCGGACA+GGG | - | chr5_3:55014890-55014909 | Msa0818910:intron | 50.0% |
| AACCCTGTCCGGGAAAAGTA+AGG | + | chr5_3:55014895-55014914 | None:intergenic | 50.0% | |
| AGCATCTTACAACCCTGTCC+GGG | + | chr5_3:55014905-55014924 | None:intergenic | 50.0% | |
| ! | GCTGGTTCAAAGGATGAGAG+AGG | - | chr5_3:55015495-55015514 | Msa0818910:intron | 50.0% |
| TCAAAGGATGAGAGAGGAGC+TGG | - | chr5_3:55015501-55015520 | Msa0818910:intron | 50.0% | |
| CAAAGGATGAGAGAGGAGCT+GGG | - | chr5_3:55015502-55015521 | Msa0818910:intron | 50.0% | |
| GCCCAATAGAGAGAGTGACT+TGG | - | chr5_3:55015732-55015751 | Msa0818910:CDS | 50.0% | |
| GGTTGGACCAGAGAGTGGAA+AGG | - | chr5_3:55011575-55011594 | Msa0818910:three_prime_UTR | 55.0% | |
| GGACCAGAGAGTGGAAAGGA+TGG | - | chr5_3:55011579-55011598 | Msa0818910:three_prime_UTR | 55.0% | |
| CACCCATCCTTTCCACTCTC+TGG | + | chr5_3:55011585-55011604 | None:intergenic | 55.0% | |
| CTCCTCTGGCAGAACCTGTT+AGG | + | chr5_3:55014378-55014397 | None:intergenic | 55.0% | |
| ! | CTTTGTCTAGGGCACGTTGG+AGG | + | chr5_3:55015465-55015484 | None:intergenic | 55.0% |
| GGTTGGACCAGAGAGTGGAA+AGG | - | chr5_3:55011575-55011594 | Msa0818910:three_prime_UTR | 55.0% | |
| GGACCAGAGAGTGGAAAGGA+TGG | - | chr5_3:55011579-55011598 | Msa0818910:three_prime_UTR | 55.0% | |
| CACCCATCCTTTCCACTCTC+TGG | + | chr5_3:55011585-55011604 | None:intergenic | 55.0% | |
| CTCCTCTGGCAGAACCTGTT+AGG | + | chr5_3:55014378-55014397 | None:intergenic | 55.0% | |
| ! | CTTTGTCTAGGGCACGTTGG+AGG | + | chr5_3:55015465-55015484 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 55011411 | 55015851 | 55011411 | ID=Msa0818910;Name=Msa0818910 |
| chr5_3 | mRNA | 55011411 | 55015851 | 55011411 | ID=Msa0818910-mRNA-1;Parent=Msa0818910;Name=Msa0818910-mRNA-1;_AED=0.20;_eAED=0.21;_QI=0|0.85|0.75|1|1|1|8|311|361 |
| chr5_3 | exon | 55011411 | 55011808 | 55011411 | ID=Msa0818910-mRNA-1:exon:16686;Parent=Msa0818910-mRNA-1 |
| chr5_3 | exon | 55011956 | 55012030 | 55011956 | ID=Msa0818910-mRNA-1:exon:16685;Parent=Msa0818910-mRNA-1 |
| chr5_3 | exon | 55012115 | 55012184 | 55012115 | ID=Msa0818910-mRNA-1:exon:16684;Parent=Msa0818910-mRNA-1 |
| chr5_3 | exon | 55012269 | 55012351 | 55012269 | ID=Msa0818910-mRNA-1:exon:16683;Parent=Msa0818910-mRNA-1 |
| chr5_3 | exon | 55012724 | 55012879 | 55012724 | ID=Msa0818910-mRNA-1:exon:16682;Parent=Msa0818910-mRNA-1 |
| chr5_3 | exon | 55013244 | 55013415 | 55013244 | ID=Msa0818910-mRNA-1:exon:16681;Parent=Msa0818910-mRNA-1 |
| chr5_3 | exon | 55013505 | 55013668 | 55013505 | ID=Msa0818910-mRNA-1:exon:16680;Parent=Msa0818910-mRNA-1 |
| chr5_3 | exon | 55015573 | 55015851 | 55015573 | ID=Msa0818910-mRNA-1:exon:16679;Parent=Msa0818910-mRNA-1 |
| chr5_3 | CDS | 55015573 | 55015851 | 55015573 | ID=Msa0818910-mRNA-1:cds;Parent=Msa0818910-mRNA-1 |
| chr5_3 | CDS | 55013505 | 55013668 | 55013505 | ID=Msa0818910-mRNA-1:cds;Parent=Msa0818910-mRNA-1 |
| chr5_3 | CDS | 55013244 | 55013415 | 55013244 | ID=Msa0818910-mRNA-1:cds;Parent=Msa0818910-mRNA-1 |
| chr5_3 | CDS | 55012724 | 55012879 | 55012724 | ID=Msa0818910-mRNA-1:cds;Parent=Msa0818910-mRNA-1 |
| chr5_3 | CDS | 55012269 | 55012351 | 55012269 | ID=Msa0818910-mRNA-1:cds;Parent=Msa0818910-mRNA-1 |
| chr5_3 | CDS | 55012115 | 55012184 | 55012115 | ID=Msa0818910-mRNA-1:cds;Parent=Msa0818910-mRNA-1 |
| chr5_3 | CDS | 55011956 | 55012030 | 55011956 | ID=Msa0818910-mRNA-1:cds;Parent=Msa0818910-mRNA-1 |
| chr5_3 | CDS | 55011722 | 55011808 | 55011722 | ID=Msa0818910-mRNA-1:cds;Parent=Msa0818910-mRNA-1 |
| chr5_3 | three_prime_UTR | 55011411 | 55011721 | 55011411 | ID=Msa0818910-mRNA-1:three_prime_utr;Parent=Msa0818910-mRNA-1 |
| Gene Sequence |
| Protein sequence |
