Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0743690 | Msa0824720 | 0.802314 | 5.950983e-49 | -8.615850e-47 |
| Msa0784630 | Msa0824720 | 0.891581 | 3.486164e-74 | -8.615850e-47 |
| Msa0824720 | Msa0863810 | 0.923320 | 3.100024e-89 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 128 sgRNAs with CRISPR-Local
Find 260 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACACATGATTATATGATAAT+TGG | 0.136634 | 5_3:-64203429 | Msa0824720:three_prime_UTR |
| TAGCTACAGCACAATGATTT+TGG | 0.138385 | 5_3:-64203745 | Msa0824720:three_prime_UTR |
| GCTAGGTTGCTTGGGGAAAA+TGG | 0.147100 | 5_3:-64204470 | Msa0824720:three_prime_UTR |
| GAAGCTTCAATAGGTTATTT+TGG | 0.219887 | 5_3:+64204965 | None:intergenic |
| GATAACTAAGAAAGAATTTC+GGG | 0.237583 | 5_3:+64204687 | None:intergenic |
| TGAGCTTCTTAGACAGGTTT+TGG | 0.251317 | 5_3:-64204213 | Msa0824720:three_prime_UTR |
| AGTTACAACTCTCTGATTAA+AGG | 0.289233 | 5_3:-64203639 | Msa0824720:three_prime_UTR |
| TAGAGGTTATGCAGAAAATT+TGG | 0.294463 | 5_3:-64203769 | Msa0824720:three_prime_UTR |
| TGCTCAAAAGTCTGCATATT+GGG | 0.296680 | 5_3:+64203336 | None:intergenic |
| AGGGTTATGCTAGGTTGCTT+GGG | 0.297743 | 5_3:-64204478 | Msa0824720:three_prime_UTR |
| AACTGTTGGGTGTTTGATTA+AGG | 0.300973 | 5_3:-64204270 | Msa0824720:three_prime_UTR |
| TTTAATGATCTTAAGGATAG+AGG | 0.308650 | 5_3:-64203996 | Msa0824720:three_prime_UTR |
| AGATAACTAAGAAAGAATTT+CGG | 0.311149 | 5_3:+64204686 | None:intergenic |
| GAGGGTTATGCTAGGTTGCT+TGG | 0.315506 | 5_3:-64204479 | Msa0824720:three_prime_UTR |
| ACTGTTTAAAACGAGAAAAT+AGG | 0.320597 | 5_3:-64203305 | Msa0824720:three_prime_UTR |
| ACGTGGTTTAGTTCGGGTTA+TGG | 0.322164 | 5_3:+64204757 | None:intergenic |
| CCTTAACTAGCTCGCCTTCC+TGG | 0.330031 | 5_3:+64203610 | None:intergenic |
| TATTGGCTTGTTTGAAAGTT+GGG | 0.337316 | 5_3:-64204364 | Msa0824720:three_prime_UTR |
| TTTCCCTTCGTTTCCTTCAC+TGG | 0.337635 | 5_3:-64204640 | Msa0824720:three_prime_UTR |
| TGTTCCGAAGAATGATTCTT+TGG | 0.340309 | 5_3:-64204501 | Msa0824720:three_prime_UTR |
| TTGGGAGGACTGATTTGGTT+TGG | 0.346755 | 5_3:-64204346 | Msa0824720:three_prime_UTR |
| TTTCCCAACGTGGTTTAGTT+CGG | 0.347682 | 5_3:+64204750 | None:intergenic |
| TTCCCAACGTGGTTTAGTTC+GGG | 0.357239 | 5_3:+64204751 | None:intergenic |
| TTGATCTTTAGGATCTTGTT+TGG | 0.358934 | 5_3:+64204811 | None:intergenic |
| CCAAACACAAAGGAGGAAAA+AGG | 0.359317 | 5_3:+64203178 | None:intergenic |
| ACTTATCAAGAGATTATTCA+TGG | 0.363261 | 5_3:-64204059 | Msa0824720:three_prime_UTR |
| TTGTTTCTGTGGTGAGGTTT+CGG | 0.369531 | 5_3:+64204837 | None:intergenic |
| CATCTCAAACCACAACTTCC+TGG | 0.372583 | 5_3:+64203902 | None:intergenic |
| ACGTATAATGTAATGATATA+TGG | 0.376012 | 5_3:-64203849 | Msa0824720:three_prime_UTR |
| GAAAGTTGGGAGGACTGATT+TGG | 0.377688 | 5_3:-64204351 | Msa0824720:three_prime_UTR |
| TATGAGCATATGATTGAATC+TGG | 0.380517 | 5_3:-64204317 | Msa0824720:three_prime_UTR |
| TTTGATGCTCTTGTTGATGC+TGG | 0.396467 | 5_3:-64204566 | Msa0824720:three_prime_UTR |
| ATAAAATGTCTTTGCAAAGT+TGG | 0.397144 | 5_3:-64203519 | Msa0824720:three_prime_UTR |
| ATATGATTGAATCTGGGGTT+GGG | 0.403623 | 5_3:-64204310 | Msa0824720:three_prime_UTR |
| CACATGATTATATGATAATT+GGG | 0.407028 | 5_3:-64203428 | Msa0824720:three_prime_UTR |
| TCATTCTTCGGAACAAAATC+AGG | 0.417363 | 5_3:+64204509 | None:intergenic |
| TGGTTTGAGATGATTCAAAA+AGG | 0.417493 | 5_3:-64203891 | Msa0824720:three_prime_UTR |
| GTGCTCAAAAGTCTGCATAT+TGG | 0.418414 | 5_3:+64203335 | None:intergenic |
| AATGATATATGGTTATTGTA+AGG | 0.426559 | 5_3:-64203838 | Msa0824720:three_prime_UTR |
| CGTGGCACCGAAGCTTCAAT+AGG | 0.432572 | 5_3:+64204956 | None:intergenic |
| TTCACATTGTGGTTTCAAAC+CGG | 0.433912 | 5_3:-64204612 | Msa0824720:three_prime_UTR |
| CCAGGAAGGCGAGCTAGTTA+AGG | 0.434932 | 5_3:-64203610 | Msa0824720:three_prime_UTR |
| AGATATGCATGATAGGCATT+TGG | 0.437930 | 5_3:-64203466 | Msa0824720:three_prime_UTR |
| AAAATAACCTATTGAAGCTT+CGG | 0.439177 | 5_3:-64204963 | Msa0824720:three_prime_UTR |
| TTTGTTAGTTTGAAAGAGGT+TGG | 0.442556 | 5_3:-64204422 | Msa0824720:three_prime_UTR |
| TAATCATGTGTACTAGCAAT+TGG | 0.446374 | 5_3:+64203441 | None:intergenic |
| TCTGAGTGACATTGTCATCA+TGG | 0.446532 | 5_3:+64204880 | None:intergenic |
| TGCGTATGAGCTTCTTAGAC+AGG | 0.446776 | 5_3:-64204219 | Msa0824720:three_prime_UTR |
| ATTCAACGAACTTCTTATGC+AGG | 0.447523 | 5_3:-64203577 | Msa0824720:three_prime_UTR |
| ACATTATACGTGTACTCATT+CGG | 0.449189 | 5_3:+64203861 | None:intergenic |
| AACCCGAACTAAACCACGTT+GGG | 0.449791 | 5_3:-64204753 | Msa0824720:three_prime_UTR |
| CTAGGTTGCTTGGGGAAAAT+GGG | 0.452180 | 5_3:-64204469 | Msa0824720:three_prime_UTR |
| CACTGGCTCACTTCACATTG+TGG | 0.454789 | 5_3:-64204623 | Msa0824720:three_prime_UTR |
| TTATTGGCTTGTTTGAAAGT+TGG | 0.455824 | 5_3:-64204365 | Msa0824720:three_prime_UTR |
| TTCAAAGGTTGTTGTCGGAT+TGG | 0.457536 | 5_3:+64204924 | None:intergenic |
| TATGGTGCAGATTTCGTTGA+GGG | 0.462402 | 5_3:+64204775 | None:intergenic |
| CCCTCCAAAGAATCATTCTT+CGG | 0.464196 | 5_3:+64204497 | None:intergenic |
| AATATTGATGTTGAAACTGT+TGG | 0.465621 | 5_3:-64204284 | Msa0824720:three_prime_UTR |
| GTTGTATACATAACCCTGTC+TGG | 0.470369 | 5_3:+64203966 | None:intergenic |
| TGTTGAAAGATATGCATGAT+AGG | 0.470710 | 5_3:-64203473 | Msa0824720:three_prime_UTR |
| ACAGTTTCAAAGGTTGTTGT+CGG | 0.475154 | 5_3:+64204919 | None:intergenic |
| GAAGAGAGTGCGCAGGAGCT+TGG | 0.478717 | 5_3:+64207124 | None:intergenic |
| TAGATTTAATGTTTAGAGAA+GGG | 0.480778 | 5_3:-64203260 | Msa0824720:three_prime_UTR |
| GGTTTGAGAAATTGAAAGAT+GGG | 0.486122 | 5_3:+64204708 | None:intergenic |
| TGGGGTTGCTTGCTGAGGCC+AGG | 0.487470 | 5_3:-64203920 | Msa0824720:three_prime_UTR |
| ACAACTTGAAGGTTTACAAA+GGG | 0.488087 | 5_3:+64203026 | None:intergenic |
| GCATTATATGAAGATTGATC+CGG | 0.493959 | 5_3:+64204593 | None:intergenic |
| GCGTACATATAACAACTTGA+AGG | 0.495793 | 5_3:+64203015 | None:intergenic |
| CCGAAGAATGATTCTTTGGA+GGG | 0.496823 | 5_3:-64204497 | Msa0824720:three_prime_UTR |
| CTGAGTGACATTGTCATCAT+GGG | 0.497507 | 5_3:+64204881 | None:intergenic |
| TGGGGAAAATGGGATGGTTG+AGG | 0.498283 | 5_3:-64204459 | Msa0824720:three_prime_UTR |
| TCTGATTAAAGGCCTTTGCC+AGG | 0.500511 | 5_3:-64203628 | Msa0824720:three_prime_UTR |
| CATATGATTGAATCTGGGGT+TGG | 0.502079 | 5_3:-64204311 | Msa0824720:three_prime_UTR |
| GGGTTTGAGAAATTGAAAGA+TGG | 0.502373 | 5_3:+64204707 | None:intergenic |
| ATATTGATGTTGAAACTGTT+GGG | 0.505327 | 5_3:-64204283 | Msa0824720:three_prime_UTR |
| TTAGATTTAATGTTTAGAGA+AGG | 0.511904 | 5_3:-64203261 | Msa0824720:three_prime_UTR |
| TATGATTGAATCTGGGGTTG+GGG | 0.514223 | 5_3:-64204309 | Msa0824720:three_prime_UTR |
| TTAATGATCTTAAGGATAGA+GGG | 0.516349 | 5_3:-64203995 | Msa0824720:three_prime_UTR |
| AAGATGGGTATTGTGAAAGA+AGG | 0.516570 | 5_3:+64204723 | None:intergenic |
| TTGTTTGGTTGTTGTTTCTG+TGG | 0.518610 | 5_3:+64204826 | None:intergenic |
| TGTGTTTGTTAGTTTGAAAG+AGG | 0.519159 | 5_3:-64204426 | Msa0824720:three_prime_UTR |
| GCGAAAGAGGAGAGAAATTG+AGG | 0.524835 | 5_3:+64207067 | None:intergenic |
| TCCGAAGAATGATTCTTTGG+AGG | 0.528081 | 5_3:-64204498 | Msa0824720:three_prime_UTR |
| ATGTATACAACGGTTATCAA+AGG | 0.530143 | 5_3:-64203954 | Msa0824720:three_prime_UTR |
| TGGTTGTTGTTTCTGTGGTG+AGG | 0.532400 | 5_3:+64204831 | None:intergenic |
| AAGGAAACGAAGGGAAAGGA+AGG | 0.535168 | 5_3:+64204646 | None:intergenic |
| GCGCAGGAGCTTGGCAATGG+CGG | 0.537744 | 5_3:+64207133 | None:intergenic |
| TGATGTGAGAGCGCATCGAA+TGG | 0.539610 | 5_3:+64207102 | None:intergenic |
| TGTGAATGAAACAGTTTCAA+AGG | 0.543255 | 5_3:+64204909 | None:intergenic |
| TTTCATGAAATGTCGCGAAA+GGG | 0.544857 | 5_3:-64203681 | Msa0824720:three_prime_UTR |
| AATCATCATTTAATAGTACA+TGG | 0.545178 | 5_3:+64203106 | None:intergenic |
| AGTGCGCAGGAGCTTGGCAA+TGG | 0.547796 | 5_3:+64207130 | None:intergenic |
| TTCAACGAACTTCTTATGCA+GGG | 0.548937 | 5_3:-64203576 | Msa0824720:three_prime_UTR |
| AGATGGGTATTGTGAAAGAA+GGG | 0.552728 | 5_3:+64204724 | None:intergenic |
| ATTCTTTGGAGGGTTATGCT+AGG | 0.552937 | 5_3:-64204487 | Msa0824720:three_prime_UTR |
| ATTAAAGGCCTTTGCCAGGA+AGG | 0.553517 | 5_3:-64203624 | Msa0824720:three_prime_UTR |
| GGTTGCTAAAGATGCTGAGT+TGG | 0.557716 | 5_3:-64203368 | Msa0824720:three_prime_UTR |
| GAAGAGGAAGAAGAATGATG+AGG | 0.559419 | 5_3:-64204030 | Msa0824720:three_prime_UTR |
| TTGCTGAGGCCAGGAAGTTG+TGG | 0.561607 | 5_3:-64203911 | Msa0824720:three_prime_UTR |
| GTTTCATGAAATGTCGCGAA+AGG | 0.562910 | 5_3:-64203682 | Msa0824720:three_prime_UTR |
| CTAGCTCGCCTTCCTGGCAA+AGG | 0.572227 | 5_3:+64203616 | None:intergenic |
| GGGTTATGCTAGGTTGCTTG+GGG | 0.575307 | 5_3:-64204477 | Msa0824720:three_prime_UTR |
| TATGATGATATGTGTGGTAG+AGG | 0.577409 | 5_3:-64203786 | Msa0824720:three_prime_UTR |
| TGATATGGGGTTGCTTGCTG+AGG | 0.578172 | 5_3:-64203925 | Msa0824720:three_prime_UTR |
| TGCAAAGTTGGAGACACTGA+GGG | 0.588567 | 5_3:-64203507 | Msa0824720:three_prime_UTR |
| AGTGAAGGAAACGAAGGGAA+AGG | 0.592056 | 5_3:+64204642 | None:intergenic |
| AACAACTTGAAGGTTTACAA+AGG | 0.592729 | 5_3:+64203025 | None:intergenic |
| TTATGGTGCAGATTTCGTTG+AGG | 0.598996 | 5_3:+64204774 | None:intergenic |
| AAGAAAATTACCTTGAACTG+CGG | 0.604829 | 5_3:+64207030 | None:intergenic |
| ATGAGCATATGATTGAATCT+GGG | 0.609681 | 5_3:-64204316 | Msa0824720:three_prime_UTR |
| TGGCTTGTTTGAAAGTTGGG+AGG | 0.614610 | 5_3:-64204361 | Msa0824720:three_prime_UTR |
| GGAGTAAAGGAAGAAACAGA+TGG | 0.618721 | 5_3:+64203546 | None:intergenic |
| TCTTGATAAGTATAGATACT+CGG | 0.625160 | 5_3:+64204071 | None:intergenic |
| GTTGCTTGGGGAAAATGGGA+TGG | 0.629510 | 5_3:-64204465 | Msa0824720:three_prime_UTR |
| AATGTGAAGTGAGCCAGTGA+AGG | 0.629610 | 5_3:+64204627 | None:intergenic |
| TCGAATGGAAGAGAGTGCGC+AGG | 0.633972 | 5_3:+64207117 | None:intergenic |
| TGAGCCAGTGAAGGAAACGA+AGG | 0.636495 | 5_3:+64204636 | None:intergenic |
| TCGGATTGGAACAGCGTACG+TGG | 0.642357 | 5_3:+64204938 | None:intergenic |
| TAACCCGAACTAAACCACGT+TGG | 0.647364 | 5_3:-64204754 | Msa0824720:three_prime_UTR |
| ACATTAAAACTCAACACAGA+CGG | 0.654839 | 5_3:+64204392 | None:intergenic |
| GAGCCAGTGAAGGAAACGAA+GGG | 0.656330 | 5_3:+64204637 | None:intergenic |
| GCGAGCTCCTCCAAACACAA+AGG | 0.670155 | 5_3:+64203168 | None:intergenic |
| TGAGCATATGATTGAATCTG+GGG | 0.670828 | 5_3:-64204315 | Msa0824720:three_prime_UTR |
| GGTGAGGTTTCGGAAATACG+AGG | 0.677848 | 5_3:+64204847 | None:intergenic |
| AGCTCCTCCAAACACAAAGG+AGG | 0.685602 | 5_3:+64203171 | None:intergenic |
| AGACAGGGTTATGTATACAA+CGG | 0.685868 | 5_3:-64203964 | Msa0824720:three_prime_UTR |
| TTGCAAAGTTGGAGACACTG+AGG | 0.690667 | 5_3:-64203508 | Msa0824720:three_prime_UTR |
| AAGCTCTATGATGATATGTG+TGG | 0.757559 | 5_3:-64203792 | Msa0824720:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTTTTTTTTTTT+TGG | - | chr5_3:64207052-64207071 | Msa0824720:exon | 0.0% |
| !!! | TTTTTTTTTTTTTTTTTTTT+GGG | - | chr5_3:64207052-64207071 | Msa0824720:exon | 0.0% |
| !!! | AGATATATTGATTATATTTT+TGG | - | chr5_3:64203710-64203729 | Msa0824720:three_prime_UTR | 10.0% |
| !!! | GATATATTGATTATATTTTT+GGG | - | chr5_3:64203711-64203730 | Msa0824720:three_prime_UTR | 10.0% |
| !! | CTTAATTAAAATAATTAAGT+TGG | + | chr5_3:64204419-64204438 | None:intergenic | 10.0% |
| !!! | TTTTCAAATAAAATAAGAAT+TGG | + | chr5_3:64205110-64205129 | None:intergenic | 10.0% |
| !!! | TAAATTTTGTAAGATTGTTT+GGG | + | chr5_3:64203480-64203499 | None:intergenic | 15.0% |
| !!! | ATAAATTTTGTAAGATTGTT+TGG | + | chr5_3:64203481-64203500 | None:intergenic | 15.0% |
| !! | AAATGCTATTAAAATTAAGT+AGG | + | chr5_3:64204180-64204199 | None:intergenic | 15.0% |
| !! | TTCAAAAATTTAAGAGTTTA+AGG | + | chr5_3:64204089-64204108 | None:intergenic | 15.0% |
| !! | AGATAAAAAGTAATAAAATC+TGG | - | chr5_3:64203989-64204008 | Msa0824720:three_prime_UTR | 15.0% |
| !!! | AATTTTGCAATAATTTTTTG+CGG | - | chr5_3:64204024-64204043 | Msa0824720:three_prime_UTR | 15.0% |
| !! | AAATGCTATTAAAATTAAGT+AGG | - | chr5_3:64204180-64204199 | Msa0824720:three_prime_UTR | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+GGG | - | chr5_3:64204181-64204200 | Msa0824720:three_prime_UTR | 15.0% |
| !!! | ATAATTAACCCTATATTTTT+TGG | - | chr5_3:64204244-64204263 | Msa0824720:three_prime_UTR | 15.0% |
| !!! | TAATTAACCCTATATTTTTT+GGG | - | chr5_3:64204245-64204264 | Msa0824720:three_prime_UTR | 15.0% |
| !! | GAAAATCTTTCAAAAAAAAA+TGG | + | chr5_3:64204310-64204329 | None:intergenic | 15.0% |
| !! | TCAAATAATTAAAAAATGGA+TGG | + | chr5_3:64204332-64204351 | None:intergenic | 15.0% |
| !! | ATTACAAGTTATAACTTACA+GGG | + | chr5_3:64203371-64203390 | None:intergenic | 20.0% |
| !! | AATTACAAGTTATAACTTAC+AGG | + | chr5_3:64203372-64203391 | None:intergenic | 20.0% |
| !! | TATTATTCATAAGTTTGTCA+AGG | - | chr5_3:64203599-64203618 | Msa0824720:three_prime_UTR | 20.0% |
| !! | TAAACAAATTTGAATTGAGT+AGG | - | chr5_3:64204118-64204137 | Msa0824720:three_prime_UTR | 20.0% |
| !! | AAACAAATTTGAATTGAGTA+GGG | - | chr5_3:64204119-64204138 | Msa0824720:three_prime_UTR | 20.0% |
| !!! | AATTAACCCTATATTTTTTG+GGG | - | chr5_3:64204246-64204265 | Msa0824720:three_prime_UTR | 20.0% |
| !! | ATCTTTCAAAAAAAAATGGA+TGG | + | chr5_3:64204306-64204325 | None:intergenic | 20.0% |
| !! | AGATAACTAAGAAAGAATTT+CGG | + | chr5_3:64205454-64205473 | None:intergenic | 20.0% |
| !!! | TAGAGTTTTTAATGATCTTA+AGG | - | chr5_3:64206134-64206153 | Msa0824720:intron | 20.0% |
| !! | ACGTATAATGTAATGATATA+TGG | - | chr5_3:64206288-64206307 | Msa0824720:intron | 20.0% |
| !! | AATGATATATGGTTATTGTA+AGG | - | chr5_3:64206299-64206318 | Msa0824720:intron | 20.0% |
| !! | ACACATGATTATATGATAAT+TGG | - | chr5_3:64206708-64206727 | Msa0824720:intron | 20.0% |
| !! | CACATGATTATATGATAATT+GGG | - | chr5_3:64206709-64206728 | Msa0824720:intron | 20.0% |
| !! | ATAATTGGGTTAAGTAAAAA+AGG | - | chr5_3:64206723-64206742 | Msa0824720:intron | 20.0% |
| !! | TTAGATTTAATGTTTAGAGA+AGG | - | chr5_3:64206876-64206895 | Msa0824720:intron | 20.0% |
| !! | TAGATTTAATGTTTAGAGAA+GGG | - | chr5_3:64206877-64206896 | Msa0824720:intron | 20.0% |
| !! | AATCATCATTTAATAGTACA+TGG | + | chr5_3:64207034-64207053 | None:intergenic | 20.0% |
| !! | TCATCTTTTCAATTTTCATC+TGG | - | chr5_3:64203141-64203160 | Msa0824720:three_prime_UTR | 25.0% |
| ! | AAAAAATGCTCAAAAGAATG+TGG | + | chr5_3:64203242-64203261 | None:intergenic | 25.0% |
| ! | AAAAAATAAGCCAATCCAAA+CGG | + | chr5_3:64203551-64203570 | None:intergenic | 25.0% |
| !!! | AATCAAACTTTGTTTTAGCA+GGG | + | chr5_3:64203829-64203848 | None:intergenic | 25.0% |
| !!! | TAATCAAACTTTGTTTTAGC+AGG | + | chr5_3:64203830-64203849 | None:intergenic | 25.0% |
| ! | AGTGCAGAAAAACAAAATTA+GGG | - | chr5_3:64204152-64204171 | Msa0824720:three_prime_UTR | 25.0% |
| !! | TTTTCTTAAGACTCGTATTA+AGG | - | chr5_3:64204456-64204475 | Msa0824720:three_prime_UTR | 25.0% |
| ! | CATGTTTCAAAGTTAGAATT+GGG | + | chr5_3:64204482-64204501 | None:intergenic | 25.0% |
| ! | ACATGTTTCAAAGTTAGAAT+TGG | + | chr5_3:64204483-64204502 | None:intergenic | 25.0% |
| !!! | AAATCTTACTTTTGTTTGAG+AGG | + | chr5_3:64204610-64204629 | None:intergenic | 25.0% |
| !! | TACAAGTTTTCTTCTACTAA+GGG | + | chr5_3:64205027-64205046 | None:intergenic | 25.0% |
| !! | ATACAAGTTTTCTTCTACTA+AGG | + | chr5_3:64205028-64205047 | None:intergenic | 25.0% |
| ! | AAAATAACCTATTGAAGCTT+CGG | - | chr5_3:64205174-64205193 | Msa0824720:intron | 25.0% |
| !!! | TGAGTAAAGTTTTGATCTTT+AGG | + | chr5_3:64205340-64205359 | None:intergenic | 25.0% |
| ! | GATAACTAAGAAAGAATTTC+GGG | + | chr5_3:64205453-64205472 | None:intergenic | 25.0% |
| !!! | GAGTTTTAATGTGTGTTTAT+TGG | - | chr5_3:64205756-64205775 | Msa0824720:intron | 25.0% |
| ! | AATATTGATGTTGAAACTGT+TGG | - | chr5_3:64205853-64205872 | Msa0824720:intron | 25.0% |
| ! | ATATTGATGTTGAAACTGTT+GGG | - | chr5_3:64205854-64205873 | Msa0824720:intron | 25.0% |
| ! | TCTTGATAAGTATAGATACT+CGG | + | chr5_3:64206069-64206088 | None:intergenic | 25.0% |
| ! | ACTTATCAAGAGATTATTCA+TGG | - | chr5_3:64206078-64206097 | Msa0824720:intron | 25.0% |
| ! | TTTAATGATCTTAAGGATAG+AGG | - | chr5_3:64206141-64206160 | Msa0824720:intron | 25.0% |
| ! | TTAATGATCTTAAGGATAGA+GGG | - | chr5_3:64206142-64206161 | Msa0824720:intron | 25.0% |
| !! | TATCAAAGGTTTTTGTGATA+TGG | - | chr5_3:64206197-64206216 | Msa0824720:intron | 25.0% |
| !! | ATCAAAGGTTTTTGTGATAT+GGG | - | chr5_3:64206198-64206217 | Msa0824720:intron | 25.0% |
| ! | ATAAAATGTCTTTGCAAAGT+TGG | - | chr5_3:64206618-64206637 | Msa0824720:intron | 25.0% |
| !! | ACTGTTTAAAACGAGAAAAT+AGG | - | chr5_3:64206832-64206851 | Msa0824720:intron | 25.0% |
| !! | AAAAAGCAGAATTTGTTCTT+TGG | - | chr5_3:64206911-64206930 | Msa0824720:intron | 25.0% |
| AAGAAAATTACCTTGAACTG+CGG | + | chr5_3:64203110-64203129 | None:intergenic | 30.0% | |
| !! | GAATGAAATCAGACTGATTT+TGG | - | chr5_3:64203340-64203359 | Msa0824720:three_prime_UTR | 30.0% |
| TTAATCCAAACAGACACTTA+GGG | - | chr5_3:64203524-64203543 | Msa0824720:three_prime_UTR | 30.0% | |
| !! | AAGTAGGTCGCTATTTTATA+GGG | + | chr5_3:64203754-64203773 | None:intergenic | 30.0% |
| !! | TAAGTAGGTCGCTATTTTAT+AGG | + | chr5_3:64203755-64203774 | None:intergenic | 30.0% |
| CAAGATTAGAACACTATGAA+AGG | - | chr5_3:64203892-64203911 | Msa0824720:three_prime_UTR | 30.0% | |
| CAGTGCAGAAAAACAAAATT+AGG | - | chr5_3:64204151-64204170 | Msa0824720:three_prime_UTR | 30.0% | |
| !! | TTACAAGGTCGCTATTTTAT+AGG | - | chr5_3:64204211-64204230 | Msa0824720:three_prime_UTR | 30.0% |
| !! | TACAAGGTCGCTATTTTATA+GGG | - | chr5_3:64204212-64204231 | Msa0824720:three_prime_UTR | 30.0% |
| !! | TTTTGTCACTTGATGTTCTA+TGG | + | chr5_3:64204514-64204533 | None:intergenic | 30.0% |
| TTTGTTTGAGAGGTAGAAAA+TGG | + | chr5_3:64204600-64204619 | None:intergenic | 30.0% | |
| ATAAGCTGTTTATCCAAACA+GGG | + | chr5_3:64204719-64204738 | None:intergenic | 30.0% | |
| TATAAGCTGTTTATCCAAAC+AGG | + | chr5_3:64204720-64204739 | None:intergenic | 30.0% | |
| TTACCAAGATAAGCTATAAG+CGG | + | chr5_3:64204760-64204779 | None:intergenic | 30.0% | |
| AGAAGAAAACTTGTATCACA+TGG | - | chr5_3:64205032-64205051 | Msa0824720:intron | 30.0% | |
| ! | GAAGCTTCAATAGGTTATTT+TGG | + | chr5_3:64205175-64205194 | None:intergenic | 30.0% |
| TGTGAATGAAACAGTTTCAA+AGG | + | chr5_3:64205231-64205250 | None:intergenic | 30.0% | |
| !! | TTGATCTTTAGGATCTTGTT+TGG | + | chr5_3:64205329-64205348 | None:intergenic | 30.0% |
| GGTTTGAGAAATTGAAAGAT+GGG | + | chr5_3:64205432-64205451 | None:intergenic | 30.0% | |
| GCATTATATGAAGATTGATC+CGG | + | chr5_3:64205547-64205566 | None:intergenic | 30.0% | |
| ! | TGTGTTTGTTAGTTTGAAAG+AGG | - | chr5_3:64205711-64205730 | Msa0824720:intron | 30.0% |
| ! | TTTGTTAGTTTGAAAGAGGT+TGG | - | chr5_3:64205715-64205734 | Msa0824720:intron | 30.0% |
| ACATTAAAACTCAACACAGA+CGG | + | chr5_3:64205748-64205767 | None:intergenic | 30.0% | |
| !! | TTATTGGCTTGTTTGAAAGT+TGG | - | chr5_3:64205772-64205791 | Msa0824720:intron | 30.0% |
| !! | TATTGGCTTGTTTGAAAGTT+GGG | - | chr5_3:64205773-64205792 | Msa0824720:intron | 30.0% |
| TATGAGCATATGATTGAATC+TGG | - | chr5_3:64205820-64205839 | Msa0824720:intron | 30.0% | |
| ATGAGCATATGATTGAATCT+GGG | - | chr5_3:64205821-64205840 | Msa0824720:intron | 30.0% | |
| !! | TTATTCATGGACTTTTGAAG+AGG | - | chr5_3:64206091-64206110 | Msa0824720:intron | 30.0% |
| ATGTATACAACGGTTATCAA+AGG | - | chr5_3:64206183-64206202 | Msa0824720:intron | 30.0% | |
| ! | TCAAAGGTTTTTGTGATATG+GGG | - | chr5_3:64206199-64206218 | Msa0824720:intron | 30.0% |
| ! | TGGTTTGAGATGATTCAAAA+AGG | - | chr5_3:64206246-64206265 | Msa0824720:intron | 30.0% |
| ACATTATACGTGTACTCATT+CGG | + | chr5_3:64206279-64206298 | None:intergenic | 30.0% | |
| TAGAGGTTATGCAGAAAATT+TGG | - | chr5_3:64206368-64206387 | Msa0824720:intron | 30.0% | |
| AGTTACAACTCTCTGATTAA+AGG | - | chr5_3:64206498-64206517 | Msa0824720:intron | 30.0% | |
| ! | ACATTTTATGAGAGGAGTAA+AGG | + | chr5_3:64206607-64206626 | None:intergenic | 30.0% |
| ! | TTGCAAAGACATTTTATGAG+AGG | + | chr5_3:64206615-64206634 | None:intergenic | 30.0% |
| TGTTGAAAGATATGCATGAT+AGG | - | chr5_3:64206664-64206683 | Msa0824720:intron | 30.0% | |
| TAATCATGTGTACTAGCAAT+TGG | + | chr5_3:64206699-64206718 | None:intergenic | 30.0% | |
| ! | AAAAAAGGAGATTTTGCACA+AGG | - | chr5_3:64206738-64206757 | Msa0824720:intron | 30.0% |
| ACAACTTGAAGGTTTACAAA+GGG | + | chr5_3:64207114-64207133 | None:intergenic | 30.0% | |
| AACAACTTGAAGGTTTACAA+AGG | + | chr5_3:64207115-64207134 | None:intergenic | 30.0% | |
| GTGGCATATGTCATATGAAA+CGG | + | chr5_3:64203223-64203242 | None:intergenic | 35.0% | |
| GTTAATCCAAACAGACACTT+AGG | - | chr5_3:64203523-64203542 | Msa0824720:three_prime_UTR | 35.0% | |
| AAGTAGGGACTAAACTTACA+AGG | - | chr5_3:64204196-64204215 | Msa0824720:three_prime_UTR | 35.0% | |
| CTCTCTCCCCAAAAAATATA+GGG | + | chr5_3:64204255-64204274 | None:intergenic | 35.0% | |
| TCTCTCTCCCCAAAAAATAT+AGG | + | chr5_3:64204256-64204275 | None:intergenic | 35.0% | |
| AAGTGACAAAACTATGCGTT+GGG | - | chr5_3:64204523-64204542 | Msa0824720:three_prime_UTR | 35.0% | |
| AGGGTCAAAATCAAAGAACA+GGG | + | chr5_3:64204700-64204719 | None:intergenic | 35.0% | |
| !! | TCTTTGATTTTGACCCTGTT+TGG | - | chr5_3:64204703-64204722 | Msa0824720:three_prime_UTR | 35.0% |
| CACAAGTAAGTCAATCCAAA+CGG | - | chr5_3:64204962-64204981 | Msa0824720:three_prime_UTR | 35.0% | |
| ACAAGTAAGTCAATCCAAAC+GGG | - | chr5_3:64204963-64204982 | Msa0824720:three_prime_UTR | 35.0% | |
| AGAACTCTCAAACAGCTTAT+GGG | + | chr5_3:64204989-64205008 | None:intergenic | 35.0% | |
| AAGAACTCTCAAACAGCTTA+TGG | + | chr5_3:64204990-64205009 | None:intergenic | 35.0% | |
| AAGCTGTTTGAGAGTTCTTA+TGG | - | chr5_3:64204991-64205010 | Msa0824720:intron | 35.0% | |
| TGTTTGAGAGTTCTTATGGA+TGG | - | chr5_3:64204995-64205014 | Msa0824720:intron | 35.0% | |
| TATCACATGGAAATAGAGCA+AGG | - | chr5_3:64205045-64205064 | Msa0824720:intron | 35.0% | |
| ATCACATGGAAATAGAGCAA+GGG | - | chr5_3:64205046-64205065 | Msa0824720:intron | 35.0% | |
| ACAGTTTCAAAGGTTGTTGT+CGG | + | chr5_3:64205221-64205240 | None:intergenic | 35.0% | |
| !! | TTGTTTGGTTGTTGTTTCTG+TGG | + | chr5_3:64205314-64205333 | None:intergenic | 35.0% |
| ! | AGATGGGTATTGTGAAAGAA+GGG | + | chr5_3:64205416-64205435 | None:intergenic | 35.0% |
| ! | AAGATGGGTATTGTGAAAGA+AGG | + | chr5_3:64205417-64205436 | None:intergenic | 35.0% |
| GGGTTTGAGAAATTGAAAGA+TGG | + | chr5_3:64205433-64205452 | None:intergenic | 35.0% | |
| TTCACATTGTGGTTTCAAAC+CGG | - | chr5_3:64205525-64205544 | Msa0824720:intron | 35.0% | |
| TCATTCTTCGGAACAAAATC+AGG | + | chr5_3:64205631-64205650 | None:intergenic | 35.0% | |
| TGTTCCGAAGAATGATTCTT+TGG | - | chr5_3:64205636-64205655 | Msa0824720:intron | 35.0% | |
| TGAGCATATGATTGAATCTG+GGG | - | chr5_3:64205822-64205841 | Msa0824720:intron | 35.0% | |
| ! | ATATGATTGAATCTGGGGTT+GGG | - | chr5_3:64205827-64205846 | Msa0824720:intron | 35.0% |
| AACTGTTGGGTGTTTGATTA+AGG | - | chr5_3:64205867-64205886 | Msa0824720:intron | 35.0% | |
| !! | TTTGATTAAGGCGTTTTGTG+CGG | - | chr5_3:64205879-64205898 | Msa0824720:intron | 35.0% |
| ! | GTTTTTAACGCGCTTATAAC+TGG | - | chr5_3:64205973-64205992 | Msa0824720:intron | 35.0% |
| AGACAGGGTTATGTATACAA+CGG | - | chr5_3:64206173-64206192 | Msa0824720:intron | 35.0% | |
| ! | TAAGGTTCTTGATTTTGCAG+AGG | - | chr5_3:64206317-64206336 | Msa0824720:intron | 35.0% |
| AAGCTCTATGATGATATGTG+TGG | - | chr5_3:64206345-64206364 | Msa0824720:intron | 35.0% | |
| TATGATGATATGTGTGGTAG+AGG | - | chr5_3:64206351-64206370 | Msa0824720:intron | 35.0% | |
| ! | TAGCTACAGCACAATGATTT+TGG | - | chr5_3:64206392-64206411 | Msa0824720:intron | 35.0% |
| ! | AGCTACAGCACAATGATTTT+GGG | - | chr5_3:64206393-64206412 | Msa0824720:intron | 35.0% |
| TTTCATGAAATGTCGCGAAA+GGG | - | chr5_3:64206456-64206475 | Msa0824720:intron | 35.0% | |
| ATTCAACGAACTTCTTATGC+AGG | - | chr5_3:64206560-64206579 | Msa0824720:intron | 35.0% | |
| TTCAACGAACTTCTTATGCA+GGG | - | chr5_3:64206561-64206580 | Msa0824720:intron | 35.0% | |
| AGATATGCATGATAGGCATT+TGG | - | chr5_3:64206671-64206690 | Msa0824720:intron | 35.0% | |
| ! | ATTTTGCACAAGGTATGGAA+TGG | - | chr5_3:64206748-64206767 | Msa0824720:intron | 35.0% |
| TGCTCAAAAGTCTGCATATT+GGG | + | chr5_3:64206804-64206823 | None:intergenic | 35.0% | |
| !! | CTCGTTTTAAACAGTCAATC+AGG | + | chr5_3:64206827-64206846 | None:intergenic | 35.0% |
| GCGTACATATAACAACTTGA+AGG | + | chr5_3:64207125-64207144 | None:intergenic | 35.0% | |
| ! | AAAAACGGATTCAGCGAAAG+AGG | + | chr5_3:64203086-64203105 | None:intergenic | 40.0% |
| ATGGGCACAGAGAGAAAAAT+CGG | + | chr5_3:64203178-64203197 | None:intergenic | 40.0% | |
| AAAATATGTCCTCGTGAGCT+TGG | + | chr5_3:64203640-64203659 | None:intergenic | 40.0% | |
| CAAGTGACAAAACTATGCGT+TGG | - | chr5_3:64204522-64204541 | Msa0824720:three_prime_UTR | 40.0% | |
| GTTTGAGAGGTAGAAAATGG+CGG | + | chr5_3:64204597-64204616 | None:intergenic | 40.0% | |
| CAGGGTCAAAATCAAAGAAC+AGG | + | chr5_3:64204701-64204720 | None:intergenic | 40.0% | |
| TTCAAAGGTTGTTGTCGGAT+TGG | + | chr5_3:64205216-64205235 | None:intergenic | 40.0% | |
| CTGAGTGACATTGTCATCAT+GGG | + | chr5_3:64205259-64205278 | None:intergenic | 40.0% | |
| TCTGAGTGACATTGTCATCA+TGG | + | chr5_3:64205260-64205279 | None:intergenic | 40.0% | |
| !! | TTGTTTCTGTGGTGAGGTTT+CGG | + | chr5_3:64205303-64205322 | None:intergenic | 40.0% |
| TATGGTGCAGATTTCGTTGA+GGG | + | chr5_3:64205365-64205384 | None:intergenic | 40.0% | |
| TTATGGTGCAGATTTCGTTG+AGG | + | chr5_3:64205366-64205385 | None:intergenic | 40.0% | |
| TTTCCCAACGTGGTTTAGTT+CGG | + | chr5_3:64205390-64205409 | None:intergenic | 40.0% | |
| TTTGATGCTCTTGTTGATGC+TGG | - | chr5_3:64205571-64205590 | Msa0824720:intron | 40.0% | |
| TCCGAAGAATGATTCTTTGG+AGG | - | chr5_3:64205639-64205658 | Msa0824720:intron | 40.0% | |
| CCCTCCAAAGAATCATTCTT+CGG | + | chr5_3:64205643-64205662 | None:intergenic | 40.0% | |
| CCGAAGAATGATTCTTTGGA+GGG | - | chr5_3:64205640-64205659 | Msa0824720:intron | 40.0% | |
| ! | ATTCTTTGGAGGGTTATGCT+AGG | - | chr5_3:64205650-64205669 | Msa0824720:intron | 40.0% |
| ! | CATATGATTGAATCTGGGGT+TGG | - | chr5_3:64205826-64205845 | Msa0824720:intron | 40.0% |
| ! | TATGATTGAATCTGGGGTTG+GGG | - | chr5_3:64205828-64205847 | Msa0824720:intron | 40.0% |
| ! | TGAGCTTCTTAGACAGGTTT+TGG | - | chr5_3:64205924-64205943 | Msa0824720:intron | 40.0% |
| !!! | TCTTAGACAGGTTTTGGAGA+AGG | - | chr5_3:64205930-64205949 | Msa0824720:intron | 40.0% |
| !!! | CTTAGACAGGTTTTGGAGAA+GGG | - | chr5_3:64205931-64205950 | Msa0824720:intron | 40.0% |
| GAAGAGGAAGAAGAATGATG+AGG | - | chr5_3:64206107-64206126 | Msa0824720:intron | 40.0% | |
| !!! | ATAGAGGGTATTTTCCAGAC+AGG | - | chr5_3:64206157-64206176 | Msa0824720:intron | 40.0% |
| !!! | TAGAGGGTATTTTCCAGACA+GGG | - | chr5_3:64206158-64206177 | Msa0824720:intron | 40.0% |
| GTTGTATACATAACCCTGTC+TGG | + | chr5_3:64206174-64206193 | None:intergenic | 40.0% | |
| ! | TTCTTGATTTTGCAGAGGCA+AGG | - | chr5_3:64206322-64206341 | Msa0824720:intron | 40.0% |
| !! | ATTTTGGGTCTGTGTTTGCA+TGG | - | chr5_3:64206408-64206427 | Msa0824720:intron | 40.0% |
| GTTTCATGAAATGTCGCGAA+AGG | - | chr5_3:64206455-64206474 | Msa0824720:intron | 40.0% | |
| GGAGTAAAGGAAGAAACAGA+TGG | + | chr5_3:64206594-64206613 | None:intergenic | 40.0% | |
| ! | AGGAGATTTTGCACAAGGTA+TGG | - | chr5_3:64206743-64206762 | Msa0824720:intron | 40.0% |
| GTGCTCAAAAGTCTGCATAT+TGG | + | chr5_3:64206805-64206824 | None:intergenic | 40.0% | |
| CCAAACACAAAGGAGGAAAA+AGG | + | chr5_3:64206962-64206981 | None:intergenic | 40.0% | |
| ! | CCTTTTTCCTCCTTTGTGTT+TGG | - | chr5_3:64206959-64206978 | Msa0824720:intron | 40.0% |
| ! | TTTTCCTCCTTTGTGTTTGG+AGG | - | chr5_3:64206962-64206981 | Msa0824720:intron | 40.0% |
| GCGAAAGAGGAGAGAAATTG+AGG | + | chr5_3:64203073-64203092 | None:intergenic | 45.0% | |
| ACCTTGAACTGCGGCAAAAA+CGG | + | chr5_3:64203101-64203120 | None:intergenic | 45.0% | |
| ! | AATGCCAACCATGGAAGCAT+GGG | + | chr5_3:64203196-64203215 | None:intergenic | 45.0% |
| TAATGCCAACCATGGAAGCA+TGG | + | chr5_3:64203197-64203216 | None:intergenic | 45.0% | |
| AACGGAAGTAATGCCAACCA+TGG | + | chr5_3:64203205-64203224 | None:intergenic | 45.0% | |
| ATGAAGATACCAAGCTCACG+AGG | - | chr5_3:64203628-64203647 | Msa0824720:three_prime_UTR | 45.0% | |
| TAGAAAATGGCGGTCATGCA+GGG | + | chr5_3:64204587-64204606 | None:intergenic | 45.0% | |
| CAGGGTGATGAGAATTAAGC+AGG | + | chr5_3:64204682-64204701 | None:intergenic | 45.0% | |
| CTATAAGCGGCTGTGCTATA+AGG | + | chr5_3:64204747-64204766 | None:intergenic | 45.0% | |
| CAGCCGCTTATAGCTTATCT+TGG | - | chr5_3:64204754-64204773 | Msa0824720:three_prime_UTR | 45.0% | |
| TGGAAATAGAGCAAGGGCAA+TGG | - | chr5_3:64205052-64205071 | Msa0824720:intron | 45.0% | |
| !! | TGGTTGTTGTTTCTGTGGTG+AGG | + | chr5_3:64205309-64205328 | None:intergenic | 45.0% |
| ! | ACGTGGTTTAGTTCGGGTTA+TGG | + | chr5_3:64205383-64205402 | None:intergenic | 45.0% |
| TAACCCGAACTAAACCACGT+TGG | - | chr5_3:64205383-64205402 | Msa0824720:intron | 45.0% | |
| AACCCGAACTAAACCACGTT+GGG | - | chr5_3:64205384-64205403 | Msa0824720:intron | 45.0% | |
| ! | TTCCCAACGTGGTTTAGTTC+GGG | + | chr5_3:64205389-64205408 | None:intergenic | 45.0% |
| !!! | AGAAGGGTATTTTCCCAACG+TGG | + | chr5_3:64205400-64205419 | None:intergenic | 45.0% |
| AAGGAAACGAAGGGAAAGGA+AGG | + | chr5_3:64205494-64205513 | None:intergenic | 45.0% | |
| AGTGAAGGAAACGAAGGGAA+AGG | + | chr5_3:64205498-64205517 | None:intergenic | 45.0% | |
| TTTCCCTTCGTTTCCTTCAC+TGG | - | chr5_3:64205497-64205516 | Msa0824720:intron | 45.0% | |
| AATGTGAAGTGAGCCAGTGA+AGG | + | chr5_3:64205513-64205532 | None:intergenic | 45.0% | |
| AGGGTTATGCTAGGTTGCTT+GGG | - | chr5_3:64205659-64205678 | Msa0824720:intron | 45.0% | |
| CTAGGTTGCTTGGGGAAAAT+GGG | - | chr5_3:64205668-64205687 | Msa0824720:intron | 45.0% | |
| !! | TGGCTTGTTTGAAAGTTGGG+AGG | - | chr5_3:64205776-64205795 | Msa0824720:intron | 45.0% |
| GAAAGTTGGGAGGACTGATT+TGG | - | chr5_3:64205786-64205805 | Msa0824720:intron | 45.0% | |
| !! | TTGGGAGGACTGATTTGGTT+TGG | - | chr5_3:64205791-64205810 | Msa0824720:intron | 45.0% |
| TGCGTATGAGCTTCTTAGAC+AGG | - | chr5_3:64205918-64205937 | Msa0824720:intron | 45.0% | |
| CATCTCAAACCACAACTTCC+TGG | + | chr5_3:64206238-64206257 | None:intergenic | 45.0% | |
| TCTGATTAAAGGCCTTTGCC+AGG | - | chr5_3:64206509-64206528 | Msa0824720:intron | 45.0% | |
| ATTAAAGGCCTTTGCCAGGA+AGG | - | chr5_3:64206513-64206532 | Msa0824720:intron | 45.0% | |
| TTGCAAAGTTGGAGACACTG+AGG | - | chr5_3:64206629-64206648 | Msa0824720:intron | 45.0% | |
| TGCAAAGTTGGAGACACTGA+GGG | - | chr5_3:64206630-64206649 | Msa0824720:intron | 45.0% | |
| GGTTGCTAAAGATGCTGAGT+TGG | - | chr5_3:64206769-64206788 | Msa0824720:intron | 45.0% | |
| !!! | TATAAGTAATTTTTTTTATA+GGG | + | chr5_3:64203798-64203817 | None:intergenic | 5.0% |
| !!! | TTATAAGTAATTTTTTTTAT+AGG | + | chr5_3:64203799-64203818 | None:intergenic | 5.0% |
| !! | TAATTCAAATAATTAAAAAA+TGG | + | chr5_3:64204336-64204355 | None:intergenic | 5.0% |
| !!! | TAAATTACTTTTTTTTTTTA+GGG | + | chr5_3:64204385-64204404 | None:intergenic | 5.0% |
| !!! | TTAAATTACTTTTTTTTTTT+AGG | + | chr5_3:64204386-64204405 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTTTTTTTTTTTG+GGG | - | chr5_3:64207057-64207076 | Msa0824720:exon | 5.0% |
| ! | TGATGTGAGAGCGCATCGAA+TGG | + | chr5_3:64203038-64203057 | None:intergenic | 50.0% |
| !! | TCCGTTTTTGCCGCAGTTCA+AGG | - | chr5_3:64203097-64203116 | Msa0824720:three_prime_UTR | 50.0% |
| ACGGTCCCTAAGTGTCTGTT+TGG | + | chr5_3:64203532-64203551 | None:intergenic | 50.0% | |
| ACAGACACTTAGGGACCGTT+TGG | - | chr5_3:64203533-64203552 | Msa0824720:three_prime_UTR | 50.0% | |
| CACTTAGGGACCGTTTGGAT+TGG | - | chr5_3:64203538-64203557 | Msa0824720:three_prime_UTR | 50.0% | |
| TGGCGGAGATGAATCACGAA+CGG | + | chr5_3:64204562-64204581 | None:intergenic | 50.0% | |
| GTAGAAAATGGCGGTCATGC+AGG | + | chr5_3:64204588-64204607 | None:intergenic | 50.0% | |
| AAACAGCTTATGGGCCCGTT+TGG | + | chr5_3:64204980-64204999 | None:intergenic | 50.0% | |
| GGTGAGGTTTCGGAAATACG+AGG | + | chr5_3:64205293-64205312 | None:intergenic | 50.0% | |
| GAGCCAGTGAAGGAAACGAA+GGG | + | chr5_3:64205503-64205522 | None:intergenic | 50.0% | |
| TGAGCCAGTGAAGGAAACGA+AGG | + | chr5_3:64205504-64205523 | None:intergenic | 50.0% | |
| !! | CACTGGCTCACTTCACATTG+TGG | - | chr5_3:64205514-64205533 | Msa0824720:intron | 50.0% |
| GAGGGTTATGCTAGGTTGCT+TGG | - | chr5_3:64205658-64205677 | Msa0824720:intron | 50.0% | |
| GGGTTATGCTAGGTTGCTTG+GGG | - | chr5_3:64205660-64205679 | Msa0824720:intron | 50.0% | |
| GCTAGGTTGCTTGGGGAAAA+TGG | - | chr5_3:64205667-64205686 | Msa0824720:intron | 50.0% | |
| GTTGCTTGGGGAAAATGGGA+TGG | - | chr5_3:64205672-64205691 | Msa0824720:intron | 50.0% | |
| TGGGGAAAATGGGATGGTTG+AGG | - | chr5_3:64205678-64205697 | Msa0824720:intron | 50.0% | |
| ! | TGATATGGGGTTGCTTGCTG+AGG | - | chr5_3:64206212-64206231 | Msa0824720:intron | 50.0% |
| AGCTCCTCCAAACACAAAGG+AGG | + | chr5_3:64206969-64206988 | None:intergenic | 50.0% | |
| ! | TCGAATGGAAGAGAGTGCGC+AGG | + | chr5_3:64203023-64203042 | None:intergenic | 55.0% |
| TCTCTGTGCCCATGCTTCCA+TGG | - | chr5_3:64203185-64203204 | Msa0824720:three_prime_UTR | 55.0% | |
| TGTGCCCATGCTTCCATGGT+TGG | - | chr5_3:64203189-64203208 | Msa0824720:three_prime_UTR | 55.0% | |
| GGAGATGAATCACGAACGGG+CGG | + | chr5_3:64204558-64204577 | None:intergenic | 55.0% | |
| GGCGGAGATGAATCACGAAC+GGG | + | chr5_3:64204561-64204580 | None:intergenic | 55.0% | |
| ! | CGTGGCACCGAAGCTTCAAT+AGG | + | chr5_3:64205184-64205203 | None:intergenic | 55.0% |
| ! | TCGGATTGGAACAGCGTACG+TGG | + | chr5_3:64205202-64205221 | None:intergenic | 55.0% |
| TTGCTGAGGCCAGGAAGTTG+TGG | - | chr5_3:64206226-64206245 | Msa0824720:intron | 55.0% | |
| CCTTAACTAGCTCGCCTTCC+TGG | + | chr5_3:64206530-64206549 | None:intergenic | 55.0% | |
| CCAGGAAGGCGAGCTAGTTA+AGG | - | chr5_3:64206527-64206546 | Msa0824720:intron | 55.0% | |
| GCGAGCTCCTCCAAACACAA+AGG | + | chr5_3:64206972-64206991 | None:intergenic | 55.0% | |
| AGTGCGCAGGAGCTTGGCAA+TGG | + | chr5_3:64203010-64203029 | None:intergenic | 60.0% | |
| ! | GAAGAGAGTGCGCAGGAGCT+TGG | + | chr5_3:64203016-64203035 | None:intergenic | 60.0% |
| GAATCACGAACGGGCGGAGA+GGG | + | chr5_3:64204552-64204571 | None:intergenic | 60.0% | |
| TGAATCACGAACGGGCGGAG+AGG | + | chr5_3:64204553-64204572 | None:intergenic | 60.0% | |
| AATGGCGGTCATGCAGGGAG+TGG | + | chr5_3:64204582-64204601 | None:intergenic | 60.0% | |
| CTAGCTCGCCTTCCTGGCAA+AGG | + | chr5_3:64206524-64206543 | None:intergenic | 60.0% | |
| GCGCAGGAGCTTGGCAATGG+CGG | + | chr5_3:64203007-64203026 | None:intergenic | 65.0% | |
| ! | TGGGGTTGCTTGCTGAGGCC+AGG | - | chr5_3:64206217-64206236 | Msa0824720:intron | 65.0% |
| GGCGGTCATGCAGGGAGTGG+CGG | + | chr5_3:64204579-64204598 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 64202994 | 64207165 | 64202994 | ID=Msa0824720;Name=Msa0824720 |
| chr5_3 | mRNA | 64202994 | 64207165 | 64202994 | ID=Msa0824720-mRNA-1;Parent=Msa0824720;Name=Msa0824720-mRNA-1;_AED=0.02;_eAED=0.02;_QI=48|0|1|1|0|0|2|2019|17 |
| chr5_3 | exon | 64202994 | 64204989 | 64202994 | ID=Msa0824720-mRNA-1:exon:20054;Parent=Msa0824720-mRNA-1 |
| chr5_3 | exon | 64207041 | 64207165 | 64207041 | ID=Msa0824720-mRNA-1:exon:20053;Parent=Msa0824720-mRNA-1 |
| chr5_3 | five_prime_UTR | 64207118 | 64207165 | 64207118 | ID=Msa0824720-mRNA-1:five_prime_utr;Parent=Msa0824720-mRNA-1 |
| chr5_3 | CDS | 64207064 | 64207117 | 64207064 | ID=Msa0824720-mRNA-1:cds;Parent=Msa0824720-mRNA-1 |
| chr5_3 | three_prime_UTR | 64207041 | 64207063 | 64207041 | ID=Msa0824720-mRNA-1:three_prime_utr;Parent=Msa0824720-mRNA-1 |
| chr5_3 | three_prime_UTR | 64202994 | 64204989 | 64202994 | ID=Msa0824720-mRNA-1:three_prime_utr;Parent=Msa0824720-mRNA-1 |
| Gene Sequence |
| Protein sequence |
