Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0828050 | RHN55327.1 | 96.067 | 356 | 12 | 2 | 1 | 354 | 1 | 356 | 0.0 | 700 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0828050 | sp|Q9C9L2|TCP15_ARATH | 72.222 | 126 | 16 | 2 | 16 | 136 | 10 | 121 | 2.30e-50 | 176 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0828050 | A0A396HX90 | 96.067 | 356 | 12 | 2 | 1 | 354 | 1 | 356 | 0.0 | 700 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0828050 | TF | TCP |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0828050 | Msa1390410 | 0.811844 | 5.712166e-51 | -8.615850e-47 |
| Msa0189050 | Msa0828050 | 0.801718 | 7.887962e-49 | -8.615850e-47 |
| Msa0231310 | Msa0828050 | 0.803846 | 2.868779e-49 | -8.615850e-47 |
| Msa0309160 | Msa0828050 | 0.808058 | 3.731263e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0828050 | MtrunA17_Chr5g0416581 | 96.067 | 356 | 12 | 2 | 1 | 354 | 1 | 356 | 0.0 | 700 |
| Msa0828050 | MtrunA17_Chr4g0060601 | 47.297 | 444 | 152 | 19 | 16 | 411 | 27 | 436 | 6.53e-92 | 284 |
| Msa0828050 | MtrunA17_Chr2g0277361 | 65.101 | 149 | 36 | 5 | 21 | 167 | 91 | 225 | 1.42e-50 | 176 |
| Msa0828050 | MtrunA17_Chr7g0224581 | 59.677 | 124 | 33 | 3 | 55 | 178 | 38 | 144 | 1.50e-39 | 143 |
| Msa0828050 | MtrunA17_Chr1g0211941 | 71.277 | 94 | 18 | 2 | 50 | 139 | 17 | 105 | 2.25e-38 | 139 |
| Msa0828050 | MtrunA17_Chr8g0350941 | 79.221 | 77 | 16 | 0 | 63 | 139 | 76 | 152 | 5.56e-37 | 137 |
| Msa0828050 | MtrunA17_Chr1g0164881 | 78.205 | 78 | 12 | 1 | 58 | 135 | 28 | 100 | 3.96e-36 | 132 |
| Msa0828050 | MtrunA17_Chr1g0180911 | 79.412 | 68 | 14 | 0 | 62 | 129 | 44 | 111 | 1.35e-33 | 124 |
| Msa0828050 | MtrunA17_Chr1g0204001 | 67.059 | 85 | 28 | 0 | 64 | 148 | 61 | 145 | 3.90e-33 | 127 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0828050 | AT1G69690.1 | 72.222 | 126 | 16 | 2 | 16 | 136 | 10 | 121 | 2.34e-51 | 176 |
| Msa0828050 | AT3G47620.1 | 41.618 | 346 | 112 | 13 | 58 | 353 | 108 | 413 | 2.31e-50 | 177 |
| Msa0828050 | AT1G58100.1 | 88.235 | 85 | 10 | 0 | 64 | 148 | 57 | 141 | 1.72e-46 | 165 |
| Msa0828050 | AT1G35560.1 | 88.372 | 86 | 9 | 1 | 63 | 148 | 52 | 136 | 2.29e-44 | 157 |
| Msa0828050 | AT2G45680.1 | 76.471 | 85 | 20 | 0 | 60 | 144 | 68 | 152 | 1.50e-38 | 142 |
| Msa0828050 | AT5G51910.1 | 74.699 | 83 | 21 | 0 | 57 | 139 | 47 | 129 | 1.59e-37 | 138 |
| Msa0828050 | AT5G51910.2 | 74.699 | 83 | 21 | 0 | 57 | 139 | 47 | 129 | 1.59e-37 | 138 |
| Msa0828050 | AT5G23280.1 | 74.390 | 82 | 16 | 1 | 58 | 139 | 35 | 111 | 1.06e-36 | 134 |
| Msa0828050 | AT3G27010.2 | 80.000 | 75 | 15 | 0 | 54 | 128 | 65 | 139 | 1.78e-35 | 133 |
| Msa0828050 | AT3G27010.1 | 80.000 | 75 | 15 | 0 | 54 | 128 | 65 | 139 | 1.78e-35 | 133 |
| Msa0828050 | AT5G08330.1 | 73.494 | 83 | 17 | 1 | 58 | 140 | 27 | 104 | 2.82e-35 | 130 |
| Msa0828050 | AT2G37000.1 | 77.419 | 62 | 14 | 0 | 65 | 126 | 41 | 102 | 1.07e-27 | 108 |
| Msa0828050 | AT5G41030.1 | 58.228 | 79 | 27 | 1 | 51 | 129 | 58 | 130 | 1.53e-26 | 107 |
| Msa0828050 | AT1G58100.2 | 62.353 | 85 | 8 | 1 | 64 | 148 | 57 | 117 | 7.75e-24 | 102 |
| Msa0828050 | AT3G45150.1 | 61.290 | 62 | 24 | 0 | 64 | 125 | 14 | 75 | 2.13e-21 | 90.9 |
Find 121 sgRNAs with CRISPR-Local
Find 264 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAATTATTATCACAAAATA+TGG | 0.184669 | 5_4:+314463 | Msa0828050:CDS |
| TAAAAGCTGAAGAGGGAAAT+TGG | 0.195439 | 5_4:-313727 | None:intergenic |
| ATTCCTTCTGTTGGAAATAA+TGG | 0.210892 | 5_4:+314626 | Msa0828050:CDS |
| CCTGAACCTAGTTGACTTCC+AGG | 0.283489 | 5_4:-314725 | None:intergenic |
| GTAATGGAAATGATCCAATT+TGG | 0.290902 | 5_4:+314600 | Msa0828050:CDS |
| ACAGAAGGAATTGCCCAAAT+TGG | 0.300472 | 5_4:-314614 | None:intergenic |
| CTTCAAATACGGCAGCGTTT+TGG | 0.303402 | 5_4:+314534 | Msa0828050:CDS |
| AGCAGTACAGCCATCATTTC+CGG | 0.303951 | 5_4:-313805 | None:intergenic |
| CTTCCAGGCATAAGATTCAT+TGG | 0.326078 | 5_4:-314710 | None:intergenic |
| GGTGCTCATCATCAAAATAA+TGG | 0.332278 | 5_4:+313690 | Msa0828050:CDS |
| GGCCGGAATTGTTCCTGTTC+CGG | 0.338886 | 5_4:-314042 | None:intergenic |
| AACCAAGGTGTTAATGTTAA+TGG | 0.358090 | 5_4:+314575 | Msa0828050:CDS |
| GTTCCAGCTCACGCGTGAGC+TGG | 0.358435 | 5_4:+313950 | Msa0828050:CDS |
| GTCCGTCAACCTTCGTGTGC+CGG | 0.377510 | 5_4:-313884 | None:intergenic |
| AAGCATACTCAGATTGCTTT+CGG | 0.377552 | 5_4:-314786 | None:intergenic |
| GTCATCGCTGCGACCGGAAC+AGG | 0.396764 | 5_4:+314029 | Msa0828050:CDS |
| GATTGAGTGGCTGCTTCAAC+AGG | 0.397983 | 5_4:+313995 | Msa0828050:CDS |
| CAGCATCACGGCGGAGGTGG+AGG | 0.398279 | 5_4:+314866 | Msa0828050:CDS |
| GGAAATAATGGTTTATATAG+AGG | 0.402512 | 5_4:+314638 | Msa0828050:CDS |
| TACAAGCAAAACAAGAGCTT+CGG | 0.403614 | 5_4:+314345 | Msa0828050:CDS |
| TAATGGAAATGATCCAATTT+GGG | 0.409142 | 5_4:+314601 | Msa0828050:CDS |
| AGCTTAGAAACCGGGCTGAA+TGG | 0.413702 | 5_4:+314180 | Msa0828050:CDS |
| CACGGCGGAGGTGGAGGAGG+AGG | 0.417922 | 5_4:+314872 | Msa0828050:CDS |
| CTGGAACACTCTGGCGGCAC+AGG | 0.419048 | 5_4:-313934 | None:intergenic |
| CATCACGGCGGAGGTGGAGG+AGG | 0.423459 | 5_4:+314869 | Msa0828050:CDS |
| TTTGGATGGTAACTGGTAAT+GGG | 0.423705 | 5_4:+314552 | Msa0828050:CDS |
| TTCAAGCCATGCTTCAAATA+CGG | 0.431597 | 5_4:+314523 | Msa0828050:CDS |
| GAAAACACCGCCACCGCCTC+TGG | 0.432301 | 5_4:+314371 | Msa0828050:CDS |
| AACATTGCTGATAAAGAAGA+AGG | 0.434505 | 5_4:-314293 | None:intergenic |
| GACCGGAACAGGAACAATTC+CGG | 0.436306 | 5_4:+314040 | Msa0828050:CDS |
| AAAAGCTGAAGAGGGAAATT+GGG | 0.437875 | 5_4:-313726 | None:intergenic |
| AAGCAATCTGAGTATGCTTT+CGG | 0.438504 | 5_4:+314790 | Msa0828050:CDS |
| GAGGGAAATTGGGTCTGCTT+CGG | 0.440519 | 5_4:-313716 | None:intergenic |
| GCTTAGAAACCGGGCTGAAT+GGG | 0.442453 | 5_4:+314181 | Msa0828050:CDS |
| ATTTGGGCAATTCCTTCTGT+TGG | 0.444072 | 5_4:+314617 | Msa0828050:CDS |
| GGAGCTATGTCATCTCCTAA+TGG | 0.444498 | 5_4:+314659 | Msa0828050:CDS |
| GGCGGAGGATTTGAATTGTT+AGG | 0.445132 | 5_4:+314395 | Msa0828050:CDS |
| GGACAGCATCACGGCGGAGG+TGG | 0.447617 | 5_4:+314863 | Msa0828050:CDS |
| TCCTCCGCCACCAGAGGCGG+TGG | 0.448359 | 5_4:-314381 | None:intergenic |
| GTCCCAGCTCACGCGTGAGC+TGG | 0.449479 | 5_4:-313953 | None:intergenic |
| CGACGGCTCAGCTTAGAAAC+CGG | 0.451524 | 5_4:+314171 | Msa0828050:CDS |
| GTCGAAGCACGCTTCGGCGG+AGG | 0.452958 | 5_4:-313855 | None:intergenic |
| GTTTGTCGAAATCTGCCTAT+AGG | 0.456835 | 5_4:-314822 | None:intergenic |
| CCGGTCGCAGCGATGACGGC+TGG | 0.458247 | 5_4:-314023 | None:intergenic |
| AATATATCTCTTAGAAGCTC+AGG | 0.459346 | 5_4:+314080 | Msa0828050:CDS |
| CCTGGAAGTCAACTAGGTTC+AGG | 0.459463 | 5_4:+314725 | Msa0828050:CDS |
| TATTTGTTACAATCAAATGT+AGG | 0.463489 | 5_4:+314491 | Msa0828050:CDS |
| ACCGCCACCGCCTCTGGTGG+CGG | 0.464821 | 5_4:+314377 | Msa0828050:CDS |
| ACAAGCAAAACAAGAGCTTC+GGG | 0.465254 | 5_4:+314346 | Msa0828050:CDS |
| ATCGTCGGCAGTGGAGGAGG+AGG | 0.467543 | 5_4:+314749 | Msa0828050:CDS |
| GTTAATGTTAATGGTGGTAA+TGG | 0.467651 | 5_4:+314584 | Msa0828050:CDS |
| TTCCAGCTCACGCGTGAGCT+GGG | 0.468128 | 5_4:+313951 | Msa0828050:CDS |
| GGTGGAGGAGGAGGAGATGA+TGG | 0.469014 | 5_4:+314881 | Msa0828050:CDS |
| GTCGGCAGTGGAGGAGGAGG+AGG | 0.469417 | 5_4:+314752 | Msa0828050:CDS |
| CACCATTAACATTAACACCT+TGG | 0.473185 | 5_4:-314577 | None:intergenic |
| CTTATGCCTGGAAGTCAACT+AGG | 0.475042 | 5_4:+314719 | Msa0828050:CDS |
| GGTTGAACAAGGTTGTTCTT+CGG | 0.480944 | 5_4:-313781 | None:intergenic |
| TCCGCCACCAGAGGCGGTGG+CGG | 0.481434 | 5_4:-314378 | None:intergenic |
| GGCAGTGGAGGAGGAGGAGG+TGG | 0.486827 | 5_4:+314755 | Msa0828050:CDS |
| ACTCTGGCGGCACAGGCCGC+CGG | 0.488107 | 5_4:-313927 | None:intergenic |
| AAACGGTATGTCAGATTCAT+CGG | 0.488724 | 5_4:+314841 | Msa0828050:CDS |
| TTGTAGCTGATGATTCTAGA+AGG | 0.490333 | 5_4:+314243 | Msa0828050:CDS |
| TCAGATTCAGATGGAAGCAT+AGG | 0.491711 | 5_4:+314419 | Msa0828050:CDS |
| TCTTTCGTCGAAGCACGCTT+CGG | 0.491715 | 5_4:-313861 | None:intergenic |
| TTCATGAAATGAAATCCATT+AGG | 0.492064 | 5_4:-314674 | None:intergenic |
| GTCGCGGAGGAGAACGAGCT+AGG | 0.495808 | 5_4:-314152 | None:intergenic |
| GGAATCGTCGGCAGTGGAGG+AGG | 0.498316 | 5_4:+314746 | Msa0828050:CDS |
| TGTTCCGGTCGCAGCGATGA+CGG | 0.498430 | 5_4:-314027 | None:intergenic |
| TGTTCAACCACCGGAAATGA+TGG | 0.498630 | 5_4:+313795 | Msa0828050:CDS |
| GTTGTTCTTCGGAGACATCT+AGG | 0.503499 | 5_4:-313770 | None:intergenic |
| ATTTGTTACAATCAAATGTA+GGG | 0.504618 | 5_4:+314492 | Msa0828050:CDS |
| GTATTTGAAGCATGGCTTGA+AGG | 0.510350 | 5_4:-314521 | None:intergenic |
| AGGCCGCCGGATCCGCATGC+CGG | 0.515715 | 5_4:+313908 | Msa0828050:CDS |
| CCAGCCGTCATCGCTGCGAC+CGG | 0.516223 | 5_4:+314023 | Msa0828050:CDS |
| TATATTAAGTGAAGTGAAGT+TGG | 0.518840 | 5_4:-314063 | None:intergenic |
| TTTCGGCTATGAATGCCTAT+AGG | 0.521533 | 5_4:+314807 | Msa0828050:CDS |
| GACCGGCACACGAAGGTTGA+CGG | 0.523997 | 5_4:+313882 | Msa0828050:CDS |
| GGTTCAGGAATCGTCGGCAG+TGG | 0.530991 | 5_4:+314740 | Msa0828050:CDS |
| GCCACCGCCTCTGGTGGCGG+AGG | 0.531020 | 5_4:+314380 | Msa0828050:CDS |
| AAACCATTATTTCCAACAGA+AGG | 0.534853 | 5_4:-314629 | None:intergenic |
| TCTCCAATGAATCTTATGCC+TGG | 0.535265 | 5_4:+314707 | Msa0828050:CDS |
| GAATTATTATCACAAAATAT+GGG | 0.535940 | 5_4:+314464 | Msa0828050:CDS |
| TCGGGACAGCATCACGGCGG+AGG | 0.536859 | 5_4:+314860 | Msa0828050:CDS |
| AGCGTGCTTCGACGAAAGAC+CGG | 0.538504 | 5_4:+313865 | Msa0828050:CDS |
| TCATTTCCGGTGGTTGAACA+AGG | 0.546186 | 5_4:-313792 | None:intergenic |
| AGCACGATCATGGAATTTGA+AGG | 0.546398 | 5_4:+313669 | None:intergenic |
| CCGCCGGCATGCGGATCCGG+CGG | 0.547046 | 5_4:-313911 | None:intergenic |
| CACACGAAGGTTGACGGACG+AGG | 0.549512 | 5_4:+313888 | Msa0828050:CDS |
| AACGGTATGTCAGATTCATC+GGG | 0.551825 | 5_4:+314842 | Msa0828050:CDS |
| AAATCCTCCGCCACCAGAGG+CGG | 0.555098 | 5_4:-314384 | None:intergenic |
| TCAGGAATCGTCGGCAGTGG+AGG | 0.556738 | 5_4:+314743 | Msa0828050:CDS |
| TATAGGCAGATTTCGACAAA+CGG | 0.560561 | 5_4:+314824 | Msa0828050:CDS |
| TTAAGTGAAGTGAAGTTGGC+CGG | 0.564822 | 5_4:-314059 | None:intergenic |
| TTCGTCGAAGCACGCTTCGG+CGG | 0.568824 | 5_4:-313858 | None:intergenic |
| AGGTTGACGGACGAGGCCGC+CGG | 0.569788 | 5_4:+313895 | Msa0828050:CDS |
| CAACTAGGTTCAGGAATCGT+CGG | 0.570415 | 5_4:+314734 | Msa0828050:CDS |
| ACGCTGCCGTATTTGAAGCA+TGG | 0.572979 | 5_4:-314529 | None:intergenic |
| TTGTTAGGTTCAGATTCAGA+TGG | 0.580560 | 5_4:+314410 | Msa0828050:CDS |
| ACGCGTGAGCTGGAACACTC+TGG | 0.580832 | 5_4:-313943 | None:intergenic |
| CAGATTCAGATGGAAGCATA+GGG | 0.583229 | 5_4:+314420 | Msa0828050:CDS |
| TAGTTCTGTCCCATTCAGCC+CGG | 0.583900 | 5_4:-314190 | None:intergenic |
| TCAAGCAGTCAACATTCCTA+AGG | 0.586300 | 5_4:+314911 | Msa0828050:CDS |
| GACGGCTCAGCTTAGAAACC+GGG | 0.596694 | 5_4:+314172 | Msa0828050:CDS |
| GAGCTGGGACATAAATCAGA+TGG | 0.597190 | 5_4:+313966 | Msa0828050:CDS |
| GAACAACCTTGTTCAACCAC+CGG | 0.600339 | 5_4:+313786 | Msa0828050:CDS |
| CAAGGTGTTAATGTTAATGG+TGG | 0.607105 | 5_4:+314578 | Msa0828050:CDS |
| AACACCGCCACCGCCTCTGG+TGG | 0.607403 | 5_4:+314374 | Msa0828050:CDS |
| GAGTAGTAACTCTACCATGT+TGG | 0.612610 | 5_4:+314265 | Msa0828050:CDS |
| ATAGTGAGAAGGCGCAGACA+TGG | 0.615199 | 5_4:-314108 | None:intergenic |
| TTCAAATCCTCCGCCACCAG+AGG | 0.616815 | 5_4:-314387 | None:intergenic |
| GTTTCTAAGCTGAGCCGTCG+CGG | 0.629887 | 5_4:-314168 | None:intergenic |
| TTACCTCGAAAATAGTGAGA+AGG | 0.638869 | 5_4:-314119 | None:intergenic |
| CAGATGGCGAGACGATTGAG+TGG | 0.645098 | 5_4:+313982 | Msa0828050:CDS |
| GATTCATCGGGACAGCATCA+CGG | 0.649257 | 5_4:+314854 | Msa0828050:CDS |
| AGTACAGCCATCATTTCCGG+TGG | 0.655208 | 5_4:-313802 | None:intergenic |
| TAGCTCGTTCTCCTCCGCGA+CGG | 0.660506 | 5_4:+314154 | Msa0828050:CDS |
| GTAACTGGTAATGGGAACCA+AGG | 0.670023 | 5_4:+314560 | Msa0828050:CDS |
| TCTAAGCTGAGCCGTCGCGG+AGG | 0.685215 | 5_4:-314165 | None:intergenic |
| GACGAAAGACCGGCACACGA+AGG | 0.698145 | 5_4:+313875 | Msa0828050:CDS |
| CGTGAGCTGGAACACTCTGG+CGG | 0.708891 | 5_4:-313940 | None:intergenic |
| TCATCGGGACAGCATCACGG+CGG | 0.798879 | 5_4:+314857 | Msa0828050:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAATTATTATCACAAAATA+TGG | + | chr5_4:314463-314482 | Msa0828050:CDS | 15.0% |
| !! | GAATTATTATCACAAAATAT+GGG | + | chr5_4:314464-314483 | Msa0828050:CDS | 15.0% |
| !! | AGAATTATTATCACAAAATA+TGG | + | chr5_4:314463-314482 | Msa0828050:CDS | 15.0% |
| !! | GAATTATTATCACAAAATAT+GGG | + | chr5_4:314464-314483 | Msa0828050:CDS | 15.0% |
| !!! | TATTTGTTACAATCAAATGT+AGG | + | chr5_4:314491-314510 | Msa0828050:CDS | 20.0% |
| !!! | ATTTGTTACAATCAAATGTA+GGG | + | chr5_4:314492-314511 | Msa0828050:CDS | 20.0% |
| !!! | TATTTGTTACAATCAAATGT+AGG | + | chr5_4:314491-314510 | Msa0828050:CDS | 20.0% |
| !!! | ATTTGTTACAATCAAATGTA+GGG | + | chr5_4:314492-314511 | Msa0828050:CDS | 20.0% |
| ! | TATATTAAGTGAAGTGAAGT+TGG | - | chr5_4:314066-314085 | None:intergenic | 25.0% |
| ! | TAATGGAAATGATCCAATTT+GGG | + | chr5_4:314601-314620 | Msa0828050:CDS | 25.0% |
| ! | GGAAATAATGGTTTATATAG+AGG | + | chr5_4:314638-314657 | Msa0828050:CDS | 25.0% |
| ! | TTCATGAAATGAAATCCATT+AGG | - | chr5_4:314677-314696 | None:intergenic | 25.0% |
| ! | TATATTAAGTGAAGTGAAGT+TGG | - | chr5_4:314066-314085 | None:intergenic | 25.0% |
| ! | TAATGGAAATGATCCAATTT+GGG | + | chr5_4:314601-314620 | Msa0828050:CDS | 25.0% |
| ! | GGAAATAATGGTTTATATAG+AGG | + | chr5_4:314638-314657 | Msa0828050:CDS | 25.0% |
| ! | TTCATGAAATGAAATCCATT+AGG | - | chr5_4:314677-314696 | None:intergenic | 25.0% |
| !! | TTTTCTCTAAAAGCTGAAGA+GGG | - | chr5_4:313737-313756 | None:intergenic | 30.0% |
| !! | TTTTTCTCTAAAAGCTGAAG+AGG | - | chr5_4:313738-313757 | None:intergenic | 30.0% |
| AATATATCTCTTAGAAGCTC+AGG | + | chr5_4:314080-314099 | Msa0828050:CDS | 30.0% | |
| AACATTGCTGATAAAGAAGA+AGG | - | chr5_4:314296-314315 | None:intergenic | 30.0% | |
| ! | AACCAAGGTGTTAATGTTAA+TGG | + | chr5_4:314575-314594 | Msa0828050:CDS | 30.0% |
| GTTAATGTTAATGGTGGTAA+TGG | + | chr5_4:314584-314603 | Msa0828050:CDS | 30.0% | |
| ! | GTAATGGAAATGATCCAATT+TGG | + | chr5_4:314600-314619 | Msa0828050:CDS | 30.0% |
| ATTCCTTCTGTTGGAAATAA+TGG | + | chr5_4:314626-314645 | Msa0828050:CDS | 30.0% | |
| AAACCATTATTTCCAACAGA+AGG | - | chr5_4:314632-314651 | None:intergenic | 30.0% | |
| !! | TTTTCTCTAAAAGCTGAAGA+GGG | - | chr5_4:313737-313756 | None:intergenic | 30.0% |
| !! | TTTTTCTCTAAAAGCTGAAG+AGG | - | chr5_4:313738-313757 | None:intergenic | 30.0% |
| AATATATCTCTTAGAAGCTC+AGG | + | chr5_4:314080-314099 | Msa0828050:CDS | 30.0% | |
| AACATTGCTGATAAAGAAGA+AGG | - | chr5_4:314296-314315 | None:intergenic | 30.0% | |
| ! | AACCAAGGTGTTAATGTTAA+TGG | + | chr5_4:314575-314594 | Msa0828050:CDS | 30.0% |
| GTTAATGTTAATGGTGGTAA+TGG | + | chr5_4:314584-314603 | Msa0828050:CDS | 30.0% | |
| ! | GTAATGGAAATGATCCAATT+TGG | + | chr5_4:314600-314619 | Msa0828050:CDS | 30.0% |
| ATTCCTTCTGTTGGAAATAA+TGG | + | chr5_4:314626-314645 | Msa0828050:CDS | 30.0% | |
| AAACCATTATTTCCAACAGA+AGG | - | chr5_4:314632-314651 | None:intergenic | 30.0% | |
| GGTGCTCATCATCAAAATAA+TGG | + | chr5_4:313690-313709 | Msa0828050:CDS | 35.0% | |
| AAAAGCTGAAGAGGGAAATT+GGG | - | chr5_4:313729-313748 | None:intergenic | 35.0% | |
| TAAAAGCTGAAGAGGGAAAT+TGG | - | chr5_4:313730-313749 | None:intergenic | 35.0% | |
| TTACCTCGAAAATAGTGAGA+AGG | - | chr5_4:314122-314141 | None:intergenic | 35.0% | |
| TTGTAGCTGATGATTCTAGA+AGG | + | chr5_4:314243-314262 | Msa0828050:CDS | 35.0% | |
| ! | AGAAGAAGGATTTTCCAACA+TGG | - | chr5_4:314282-314301 | None:intergenic | 35.0% |
| TACAAGCAAAACAAGAGCTT+CGG | + | chr5_4:314345-314364 | Msa0828050:CDS | 35.0% | |
| TTGTTAGGTTCAGATTCAGA+TGG | + | chr5_4:314410-314429 | Msa0828050:CDS | 35.0% | |
| TTCAAGCCATGCTTCAAATA+CGG | + | chr5_4:314523-314542 | Msa0828050:CDS | 35.0% | |
| ! | TTTTGGATGGTAACTGGTAA+TGG | + | chr5_4:314551-314570 | Msa0828050:CDS | 35.0% |
| TTTGGATGGTAACTGGTAAT+GGG | + | chr5_4:314552-314571 | Msa0828050:CDS | 35.0% | |
| CACCATTAACATTAACACCT+TGG | - | chr5_4:314580-314599 | None:intergenic | 35.0% | |
| ! | CAAGGTGTTAATGTTAATGG+TGG | + | chr5_4:314578-314597 | Msa0828050:CDS | 35.0% |
| AAGCATACTCAGATTGCTTT+CGG | - | chr5_4:314789-314808 | None:intergenic | 35.0% | |
| AAGCAATCTGAGTATGCTTT+CGG | + | chr5_4:314790-314809 | Msa0828050:CDS | 35.0% | |
| TATAGGCAGATTTCGACAAA+CGG | + | chr5_4:314824-314843 | Msa0828050:CDS | 35.0% | |
| AAACGGTATGTCAGATTCAT+CGG | + | chr5_4:314841-314860 | Msa0828050:CDS | 35.0% | |
| GGTGCTCATCATCAAAATAA+TGG | + | chr5_4:313690-313709 | Msa0828050:CDS | 35.0% | |
| AAAAGCTGAAGAGGGAAATT+GGG | - | chr5_4:313729-313748 | None:intergenic | 35.0% | |
| TAAAAGCTGAAGAGGGAAAT+TGG | - | chr5_4:313730-313749 | None:intergenic | 35.0% | |
| TTACCTCGAAAATAGTGAGA+AGG | - | chr5_4:314122-314141 | None:intergenic | 35.0% | |
| TTGTAGCTGATGATTCTAGA+AGG | + | chr5_4:314243-314262 | Msa0828050:CDS | 35.0% | |
| ! | AGAAGAAGGATTTTCCAACA+TGG | - | chr5_4:314282-314301 | None:intergenic | 35.0% |
| TACAAGCAAAACAAGAGCTT+CGG | + | chr5_4:314345-314364 | Msa0828050:CDS | 35.0% | |
| TTGTTAGGTTCAGATTCAGA+TGG | + | chr5_4:314410-314429 | Msa0828050:CDS | 35.0% | |
| TTCAAGCCATGCTTCAAATA+CGG | + | chr5_4:314523-314542 | Msa0828050:CDS | 35.0% | |
| ! | TTTTGGATGGTAACTGGTAA+TGG | + | chr5_4:314551-314570 | Msa0828050:CDS | 35.0% |
| TTTGGATGGTAACTGGTAAT+GGG | + | chr5_4:314552-314571 | Msa0828050:CDS | 35.0% | |
| CACCATTAACATTAACACCT+TGG | - | chr5_4:314580-314599 | None:intergenic | 35.0% | |
| ! | CAAGGTGTTAATGTTAATGG+TGG | + | chr5_4:314578-314597 | Msa0828050:CDS | 35.0% |
| AAGCATACTCAGATTGCTTT+CGG | - | chr5_4:314789-314808 | None:intergenic | 35.0% | |
| AAGCAATCTGAGTATGCTTT+CGG | + | chr5_4:314790-314809 | Msa0828050:CDS | 35.0% | |
| TATAGGCAGATTTCGACAAA+CGG | + | chr5_4:314824-314843 | Msa0828050:CDS | 35.0% | |
| AAACGGTATGTCAGATTCAT+CGG | + | chr5_4:314841-314860 | Msa0828050:CDS | 35.0% | |
| GGTTGAACAAGGTTGTTCTT+CGG | - | chr5_4:313784-313803 | None:intergenic | 40.0% | |
| TTAAGTGAAGTGAAGTTGGC+CGG | - | chr5_4:314062-314081 | None:intergenic | 40.0% | |
| GAGTAGTAACTCTACCATGT+TGG | + | chr5_4:314265-314284 | Msa0828050:CDS | 40.0% | |
| ACAAGCAAAACAAGAGCTTC+GGG | + | chr5_4:314346-314365 | Msa0828050:CDS | 40.0% | |
| ! | TCAGATTCAGATGGAAGCAT+AGG | + | chr5_4:314419-314438 | Msa0828050:CDS | 40.0% |
| ! | CAGATTCAGATGGAAGCATA+GGG | + | chr5_4:314420-314439 | Msa0828050:CDS | 40.0% |
| GAAGCATAGGGAGAAAAAGA+AGG | + | chr5_4:314432-314451 | Msa0828050:CDS | 40.0% | |
| ! | GTATTTGAAGCATGGCTTGA+AGG | - | chr5_4:314524-314543 | None:intergenic | 40.0% |
| ACAGAAGGAATTGCCCAAAT+TGG | - | chr5_4:314617-314636 | None:intergenic | 40.0% | |
| ATTTGGGCAATTCCTTCTGT+TGG | + | chr5_4:314617-314636 | Msa0828050:CDS | 40.0% | |
| TCTCCAATGAATCTTATGCC+TGG | + | chr5_4:314707-314726 | Msa0828050:CDS | 40.0% | |
| CTTCCAGGCATAAGATTCAT+TGG | - | chr5_4:314713-314732 | None:intergenic | 40.0% | |
| TTTCGGCTATGAATGCCTAT+AGG | + | chr5_4:314807-314826 | Msa0828050:CDS | 40.0% | |
| GTTTGTCGAAATCTGCCTAT+AGG | - | chr5_4:314825-314844 | None:intergenic | 40.0% | |
| AACGGTATGTCAGATTCATC+GGG | + | chr5_4:314842-314861 | Msa0828050:CDS | 40.0% | |
| GGTTGAACAAGGTTGTTCTT+CGG | - | chr5_4:313784-313803 | None:intergenic | 40.0% | |
| TTAAGTGAAGTGAAGTTGGC+CGG | - | chr5_4:314062-314081 | None:intergenic | 40.0% | |
| GAGTAGTAACTCTACCATGT+TGG | + | chr5_4:314265-314284 | Msa0828050:CDS | 40.0% | |
| ACAAGCAAAACAAGAGCTTC+GGG | + | chr5_4:314346-314365 | Msa0828050:CDS | 40.0% | |
| ! | TCAGATTCAGATGGAAGCAT+AGG | + | chr5_4:314419-314438 | Msa0828050:CDS | 40.0% |
| ! | CAGATTCAGATGGAAGCATA+GGG | + | chr5_4:314420-314439 | Msa0828050:CDS | 40.0% |
| GAAGCATAGGGAGAAAAAGA+AGG | + | chr5_4:314432-314451 | Msa0828050:CDS | 40.0% | |
| ! | GTATTTGAAGCATGGCTTGA+AGG | - | chr5_4:314524-314543 | None:intergenic | 40.0% |
| ACAGAAGGAATTGCCCAAAT+TGG | - | chr5_4:314617-314636 | None:intergenic | 40.0% | |
| ATTTGGGCAATTCCTTCTGT+TGG | + | chr5_4:314617-314636 | Msa0828050:CDS | 40.0% | |
| TCTCCAATGAATCTTATGCC+TGG | + | chr5_4:314707-314726 | Msa0828050:CDS | 40.0% | |
| CTTCCAGGCATAAGATTCAT+TGG | - | chr5_4:314713-314732 | None:intergenic | 40.0% | |
| TTTCGGCTATGAATGCCTAT+AGG | + | chr5_4:314807-314826 | Msa0828050:CDS | 40.0% | |
| GTTTGTCGAAATCTGCCTAT+AGG | - | chr5_4:314825-314844 | None:intergenic | 40.0% | |
| AACGGTATGTCAGATTCATC+GGG | + | chr5_4:314842-314861 | Msa0828050:CDS | 40.0% | |
| GTTGTTCTTCGGAGACATCT+AGG | - | chr5_4:313773-313792 | None:intergenic | 45.0% | |
| GAACAACCTTGTTCAACCAC+CGG | + | chr5_4:313786-313805 | Msa0828050:CDS | 45.0% | |
| TCATTTCCGGTGGTTGAACA+AGG | - | chr5_4:313795-313814 | None:intergenic | 45.0% | |
| TGTTCAACCACCGGAAATGA+TGG | + | chr5_4:313795-313814 | Msa0828050:CDS | 45.0% | |
| AGCAGTACAGCCATCATTTC+CGG | - | chr5_4:313808-313827 | None:intergenic | 45.0% | |
| GAGCTGGGACATAAATCAGA+TGG | + | chr5_4:313966-313985 | Msa0828050:CDS | 45.0% | |
| GGCGGAGGATTTGAATTGTT+AGG | + | chr5_4:314395-314414 | Msa0828050:CDS | 45.0% | |
| ! | CTTCAAATACGGCAGCGTTT+TGG | + | chr5_4:314534-314553 | Msa0828050:CDS | 45.0% |
| !! | AAATACGGCAGCGTTTTGGA+TGG | + | chr5_4:314538-314557 | Msa0828050:CDS | 45.0% |
| !! | GTAACTGGTAATGGGAACCA+AGG | + | chr5_4:314560-314579 | Msa0828050:CDS | 45.0% |
| GGAGCTATGTCATCTCCTAA+TGG | + | chr5_4:314659-314678 | Msa0828050:CDS | 45.0% | |
| CTTATGCCTGGAAGTCAACT+AGG | + | chr5_4:314719-314738 | Msa0828050:CDS | 45.0% | |
| CAACTAGGTTCAGGAATCGT+CGG | + | chr5_4:314734-314753 | Msa0828050:CDS | 45.0% | |
| GTTGTTCTTCGGAGACATCT+AGG | - | chr5_4:313773-313792 | None:intergenic | 45.0% | |
| GAACAACCTTGTTCAACCAC+CGG | + | chr5_4:313786-313805 | Msa0828050:CDS | 45.0% | |
| TCATTTCCGGTGGTTGAACA+AGG | - | chr5_4:313795-313814 | None:intergenic | 45.0% | |
| TGTTCAACCACCGGAAATGA+TGG | + | chr5_4:313795-313814 | Msa0828050:CDS | 45.0% | |
| AGCAGTACAGCCATCATTTC+CGG | - | chr5_4:313808-313827 | None:intergenic | 45.0% | |
| GAGCTGGGACATAAATCAGA+TGG | + | chr5_4:313966-313985 | Msa0828050:CDS | 45.0% | |
| GGCGGAGGATTTGAATTGTT+AGG | + | chr5_4:314395-314414 | Msa0828050:CDS | 45.0% | |
| ! | CTTCAAATACGGCAGCGTTT+TGG | + | chr5_4:314534-314553 | Msa0828050:CDS | 45.0% |
| !! | AAATACGGCAGCGTTTTGGA+TGG | + | chr5_4:314538-314557 | Msa0828050:CDS | 45.0% |
| !! | GTAACTGGTAATGGGAACCA+AGG | + | chr5_4:314560-314579 | Msa0828050:CDS | 45.0% |
| GGAGCTATGTCATCTCCTAA+TGG | + | chr5_4:314659-314678 | Msa0828050:CDS | 45.0% | |
| CTTATGCCTGGAAGTCAACT+AGG | + | chr5_4:314719-314738 | Msa0828050:CDS | 45.0% | |
| CAACTAGGTTCAGGAATCGT+CGG | + | chr5_4:314734-314753 | Msa0828050:CDS | 45.0% | |
| GAGGGAAATTGGGTCTGCTT+CGG | - | chr5_4:313719-313738 | None:intergenic | 50.0% | |
| AGTACAGCCATCATTTCCGG+TGG | - | chr5_4:313805-313824 | None:intergenic | 50.0% | |
| TCTTTCGTCGAAGCACGCTT+CGG | - | chr5_4:313864-313883 | None:intergenic | 50.0% | |
| GATTGAGTGGCTGCTTCAAC+AGG | + | chr5_4:313995-314014 | Msa0828050:CDS | 50.0% | |
| GACCGGAACAGGAACAATTC+CGG | + | chr5_4:314040-314059 | Msa0828050:CDS | 50.0% | |
| ! | ATAGTGAGAAGGCGCAGACA+TGG | - | chr5_4:314111-314130 | None:intergenic | 50.0% |
| ! | GCGCCTTCTCACTATTTTCG+AGG | + | chr5_4:314116-314135 | Msa0828050:CDS | 50.0% |
| AGCTTAGAAACCGGGCTGAA+TGG | + | chr5_4:314180-314199 | Msa0828050:CDS | 50.0% | |
| GCTTAGAAACCGGGCTGAAT+GGG | + | chr5_4:314181-314200 | Msa0828050:CDS | 50.0% | |
| ! | TAGTTCTGTCCCATTCAGCC+CGG | - | chr5_4:314193-314212 | None:intergenic | 50.0% |
| ! | ACGCTGCCGTATTTGAAGCA+TGG | - | chr5_4:314532-314551 | None:intergenic | 50.0% |
| !! | GCAGCGTTTTGGATGGTAAC+TGG | + | chr5_4:314545-314564 | Msa0828050:CDS | 50.0% |
| ! | CCTGAACCTAGTTGACTTCC+AGG | - | chr5_4:314728-314747 | None:intergenic | 50.0% |
| CCTGGAAGTCAACTAGGTTC+AGG | + | chr5_4:314725-314744 | Msa0828050:CDS | 50.0% | |
| GATTCATCGGGACAGCATCA+CGG | + | chr5_4:314854-314873 | Msa0828050:CDS | 50.0% | |
| GAGGGAAATTGGGTCTGCTT+CGG | - | chr5_4:313719-313738 | None:intergenic | 50.0% | |
| AGTACAGCCATCATTTCCGG+TGG | - | chr5_4:313805-313824 | None:intergenic | 50.0% | |
| TCTTTCGTCGAAGCACGCTT+CGG | - | chr5_4:313864-313883 | None:intergenic | 50.0% | |
| GATTGAGTGGCTGCTTCAAC+AGG | + | chr5_4:313995-314014 | Msa0828050:CDS | 50.0% | |
| GACCGGAACAGGAACAATTC+CGG | + | chr5_4:314040-314059 | Msa0828050:CDS | 50.0% | |
| ! | ATAGTGAGAAGGCGCAGACA+TGG | - | chr5_4:314111-314130 | None:intergenic | 50.0% |
| ! | GCGCCTTCTCACTATTTTCG+AGG | + | chr5_4:314116-314135 | Msa0828050:CDS | 50.0% |
| AGCTTAGAAACCGGGCTGAA+TGG | + | chr5_4:314180-314199 | Msa0828050:CDS | 50.0% | |
| GCTTAGAAACCGGGCTGAAT+GGG | + | chr5_4:314181-314200 | Msa0828050:CDS | 50.0% | |
| ! | TAGTTCTGTCCCATTCAGCC+CGG | - | chr5_4:314193-314212 | None:intergenic | 50.0% |
| ! | ACGCTGCCGTATTTGAAGCA+TGG | - | chr5_4:314532-314551 | None:intergenic | 50.0% |
| !! | GCAGCGTTTTGGATGGTAAC+TGG | + | chr5_4:314545-314564 | Msa0828050:CDS | 50.0% |
| ! | CCTGAACCTAGTTGACTTCC+AGG | - | chr5_4:314728-314747 | None:intergenic | 50.0% |
| CCTGGAAGTCAACTAGGTTC+AGG | + | chr5_4:314725-314744 | Msa0828050:CDS | 50.0% | |
| GATTCATCGGGACAGCATCA+CGG | + | chr5_4:314854-314873 | Msa0828050:CDS | 50.0% | |
| AGCGTGCTTCGACGAAAGAC+CGG | + | chr5_4:313865-313884 | Msa0828050:CDS | 55.0% | |
| CAGATGGCGAGACGATTGAG+TGG | + | chr5_4:313982-314001 | Msa0828050:CDS | 55.0% | |
| GGCCGGAATTGTTCCTGTTC+CGG | - | chr5_4:314045-314064 | None:intergenic | 55.0% | |
| GTTTCTAAGCTGAGCCGTCG+CGG | - | chr5_4:314171-314190 | None:intergenic | 55.0% | |
| CGACGGCTCAGCTTAGAAAC+CGG | + | chr5_4:314171-314190 | Msa0828050:CDS | 55.0% | |
| GACGGCTCAGCTTAGAAACC+GGG | + | chr5_4:314172-314191 | Msa0828050:CDS | 55.0% | |
| TTCAAATCCTCCGCCACCAG+AGG | - | chr5_4:314390-314409 | None:intergenic | 55.0% | |
| AGCGTGCTTCGACGAAAGAC+CGG | + | chr5_4:313865-313884 | Msa0828050:CDS | 55.0% | |
| CAGATGGCGAGACGATTGAG+TGG | + | chr5_4:313982-314001 | Msa0828050:CDS | 55.0% | |
| GGCCGGAATTGTTCCTGTTC+CGG | - | chr5_4:314045-314064 | None:intergenic | 55.0% | |
| GTTTCTAAGCTGAGCCGTCG+CGG | - | chr5_4:314171-314190 | None:intergenic | 55.0% | |
| CGACGGCTCAGCTTAGAAAC+CGG | + | chr5_4:314171-314190 | Msa0828050:CDS | 55.0% | |
| GACGGCTCAGCTTAGAAACC+GGG | + | chr5_4:314172-314191 | Msa0828050:CDS | 55.0% | |
| TTCAAATCCTCCGCCACCAG+AGG | - | chr5_4:314390-314409 | None:intergenic | 55.0% | |
| !! | TCGGCGGAGGCTTTTTCTGC+TGG | - | chr5_4:313845-313864 | None:intergenic | 60.0% |
| TTCGTCGAAGCACGCTTCGG+CGG | - | chr5_4:313861-313880 | None:intergenic | 60.0% | |
| GACGAAAGACCGGCACACGA+AGG | + | chr5_4:313875-313894 | Msa0828050:CDS | 60.0% | |
| GACCGGCACACGAAGGTTGA+CGG | + | chr5_4:313882-313901 | Msa0828050:CDS | 60.0% | |
| GTCCGTCAACCTTCGTGTGC+CGG | - | chr5_4:313887-313906 | None:intergenic | 60.0% | |
| ! | CACACGAAGGTTGACGGACG+AGG | + | chr5_4:313888-313907 | Msa0828050:CDS | 60.0% |
| CGTGAGCTGGAACACTCTGG+CGG | - | chr5_4:313943-313962 | None:intergenic | 60.0% | |
| ACGCGTGAGCTGGAACACTC+TGG | - | chr5_4:313946-313965 | None:intergenic | 60.0% | |
| TTCCAGCTCACGCGTGAGCT+GGG | + | chr5_4:313951-313970 | Msa0828050:CDS | 60.0% | |
| TGTTCCGGTCGCAGCGATGA+CGG | - | chr5_4:314030-314049 | None:intergenic | 60.0% | |
| TCGCGGAGGAGAACGAGCTA+GGG | - | chr5_4:314154-314173 | None:intergenic | 60.0% | |
| TAGCTCGTTCTCCTCCGCGA+CGG | + | chr5_4:314154-314173 | Msa0828050:CDS | 60.0% | |
| AAATCCTCCGCCACCAGAGG+CGG | - | chr5_4:314387-314406 | None:intergenic | 60.0% | |
| GGTTCAGGAATCGTCGGCAG+TGG | + | chr5_4:314740-314759 | Msa0828050:CDS | 60.0% | |
| TCAGGAATCGTCGGCAGTGG+AGG | + | chr5_4:314743-314762 | Msa0828050:CDS | 60.0% | |
| TCATCGGGACAGCATCACGG+CGG | + | chr5_4:314857-314876 | Msa0828050:CDS | 60.0% | |
| GGTGGAGGAGGAGGAGATGA+TGG | + | chr5_4:314881-314900 | Msa0828050:CDS | 60.0% | |
| !! | TCGGCGGAGGCTTTTTCTGC+TGG | - | chr5_4:313845-313864 | None:intergenic | 60.0% |
| TTCGTCGAAGCACGCTTCGG+CGG | - | chr5_4:313861-313880 | None:intergenic | 60.0% | |
| GACGAAAGACCGGCACACGA+AGG | + | chr5_4:313875-313894 | Msa0828050:CDS | 60.0% | |
| GACCGGCACACGAAGGTTGA+CGG | + | chr5_4:313882-313901 | Msa0828050:CDS | 60.0% | |
| GTCCGTCAACCTTCGTGTGC+CGG | - | chr5_4:313887-313906 | None:intergenic | 60.0% | |
| ! | CACACGAAGGTTGACGGACG+AGG | + | chr5_4:313888-313907 | Msa0828050:CDS | 60.0% |
| CGTGAGCTGGAACACTCTGG+CGG | - | chr5_4:313943-313962 | None:intergenic | 60.0% | |
| ACGCGTGAGCTGGAACACTC+TGG | - | chr5_4:313946-313965 | None:intergenic | 60.0% | |
| TTCCAGCTCACGCGTGAGCT+GGG | + | chr5_4:313951-313970 | Msa0828050:CDS | 60.0% | |
| TGTTCCGGTCGCAGCGATGA+CGG | - | chr5_4:314030-314049 | None:intergenic | 60.0% | |
| TCGCGGAGGAGAACGAGCTA+GGG | - | chr5_4:314154-314173 | None:intergenic | 60.0% | |
| TAGCTCGTTCTCCTCCGCGA+CGG | + | chr5_4:314154-314173 | Msa0828050:CDS | 60.0% | |
| AAATCCTCCGCCACCAGAGG+CGG | - | chr5_4:314387-314406 | None:intergenic | 60.0% | |
| GGTTCAGGAATCGTCGGCAG+TGG | + | chr5_4:314740-314759 | Msa0828050:CDS | 60.0% | |
| TCAGGAATCGTCGGCAGTGG+AGG | + | chr5_4:314743-314762 | Msa0828050:CDS | 60.0% | |
| TCATCGGGACAGCATCACGG+CGG | + | chr5_4:314857-314876 | Msa0828050:CDS | 60.0% | |
| GGTGGAGGAGGAGGAGATGA+TGG | + | chr5_4:314881-314900 | Msa0828050:CDS | 60.0% | |
| CTGGAACACTCTGGCGGCAC+AGG | - | chr5_4:313937-313956 | None:intergenic | 65.0% | |
| GTTCCAGCTCACGCGTGAGC+TGG | + | chr5_4:313950-313969 | Msa0828050:CDS | 65.0% | |
| GTCATCGCTGCGACCGGAAC+AGG | + | chr5_4:314029-314048 | Msa0828050:CDS | 65.0% | |
| GTCGCGGAGGAGAACGAGCT+AGG | - | chr5_4:314155-314174 | None:intergenic | 65.0% | |
| TCTAAGCTGAGCCGTCGCGG+AGG | - | chr5_4:314168-314187 | None:intergenic | 65.0% | |
| GAAAACACCGCCACCGCCTC+TGG | + | chr5_4:314371-314390 | Msa0828050:CDS | 65.0% | |
| GGAATCGTCGGCAGTGGAGG+AGG | + | chr5_4:314746-314765 | Msa0828050:CDS | 65.0% | |
| ATCGTCGGCAGTGGAGGAGG+AGG | + | chr5_4:314749-314768 | Msa0828050:CDS | 65.0% | |
| CTGGAACACTCTGGCGGCAC+AGG | - | chr5_4:313937-313956 | None:intergenic | 65.0% | |
| GTTCCAGCTCACGCGTGAGC+TGG | + | chr5_4:313950-313969 | Msa0828050:CDS | 65.0% | |
| GTCATCGCTGCGACCGGAAC+AGG | + | chr5_4:314029-314048 | Msa0828050:CDS | 65.0% | |
| GTCGCGGAGGAGAACGAGCT+AGG | - | chr5_4:314155-314174 | None:intergenic | 65.0% | |
| TCTAAGCTGAGCCGTCGCGG+AGG | - | chr5_4:314168-314187 | None:intergenic | 65.0% | |
| GAAAACACCGCCACCGCCTC+TGG | + | chr5_4:314371-314390 | Msa0828050:CDS | 65.0% | |
| GGAATCGTCGGCAGTGGAGG+AGG | + | chr5_4:314746-314765 | Msa0828050:CDS | 65.0% | |
| ATCGTCGGCAGTGGAGGAGG+AGG | + | chr5_4:314749-314768 | Msa0828050:CDS | 65.0% | |
| GTCGAAGCACGCTTCGGCGG+AGG | - | chr5_4:313858-313877 | None:intergenic | 70.0% | |
| ! | AGGTTGACGGACGAGGCCGC+CGG | + | chr5_4:313895-313914 | Msa0828050:CDS | 70.0% |
| GTCCCAGCTCACGCGTGAGC+TGG | - | chr5_4:313956-313975 | None:intergenic | 70.0% | |
| CCAGCCGTCATCGCTGCGAC+CGG | + | chr5_4:314023-314042 | Msa0828050:CDS | 70.0% | |
| AACACCGCCACCGCCTCTGG+TGG | + | chr5_4:314374-314393 | Msa0828050:CDS | 70.0% | |
| GTCGGCAGTGGAGGAGGAGG+AGG | + | chr5_4:314752-314771 | Msa0828050:CDS | 70.0% | |
| GGCAGTGGAGGAGGAGGAGG+TGG | + | chr5_4:314755-314774 | Msa0828050:CDS | 70.0% | |
| TCGGGACAGCATCACGGCGG+AGG | + | chr5_4:314860-314879 | Msa0828050:CDS | 70.0% | |
| GGACAGCATCACGGCGGAGG+TGG | + | chr5_4:314863-314882 | Msa0828050:CDS | 70.0% | |
| CAGCATCACGGCGGAGGTGG+AGG | + | chr5_4:314866-314885 | Msa0828050:CDS | 70.0% | |
| CATCACGGCGGAGGTGGAGG+AGG | + | chr5_4:314869-314888 | Msa0828050:CDS | 70.0% | |
| GTCGAAGCACGCTTCGGCGG+AGG | - | chr5_4:313858-313877 | None:intergenic | 70.0% | |
| ! | AGGTTGACGGACGAGGCCGC+CGG | + | chr5_4:313895-313914 | Msa0828050:CDS | 70.0% |
| GTCCCAGCTCACGCGTGAGC+TGG | - | chr5_4:313956-313975 | None:intergenic | 70.0% | |
| CCAGCCGTCATCGCTGCGAC+CGG | + | chr5_4:314023-314042 | Msa0828050:CDS | 70.0% | |
| AACACCGCCACCGCCTCTGG+TGG | + | chr5_4:314374-314393 | Msa0828050:CDS | 70.0% | |
| GTCGGCAGTGGAGGAGGAGG+AGG | + | chr5_4:314752-314771 | Msa0828050:CDS | 70.0% | |
| GGCAGTGGAGGAGGAGGAGG+TGG | + | chr5_4:314755-314774 | Msa0828050:CDS | 70.0% | |
| TCGGGACAGCATCACGGCGG+AGG | + | chr5_4:314860-314879 | Msa0828050:CDS | 70.0% | |
| GGACAGCATCACGGCGGAGG+TGG | + | chr5_4:314863-314882 | Msa0828050:CDS | 70.0% | |
| CAGCATCACGGCGGAGGTGG+AGG | + | chr5_4:314866-314885 | Msa0828050:CDS | 70.0% | |
| CATCACGGCGGAGGTGGAGG+AGG | + | chr5_4:314869-314888 | Msa0828050:CDS | 70.0% | |
| AGGCCGCCGGATCCGCATGC+CGG | + | chr5_4:313908-313927 | Msa0828050:CDS | 75.0% | |
| AGGCCGCCGGCATGCGGATC+CGG | - | chr5_4:313917-313936 | None:intergenic | 75.0% | |
| ACTCTGGCGGCACAGGCCGC+CGG | - | chr5_4:313930-313949 | None:intergenic | 75.0% | |
| ! | CCGGTCGCAGCGATGACGGC+TGG | - | chr5_4:314026-314045 | None:intergenic | 75.0% |
| ACCGCCACCGCCTCTGGTGG+CGG | + | chr5_4:314377-314396 | Msa0828050:CDS | 75.0% | |
| TCCGCCACCAGAGGCGGTGG+CGG | - | chr5_4:314381-314400 | None:intergenic | 75.0% | |
| TCCTCCGCCACCAGAGGCGG+TGG | - | chr5_4:314384-314403 | None:intergenic | 75.0% | |
| CACGGCGGAGGTGGAGGAGG+AGG | + | chr5_4:314872-314891 | Msa0828050:CDS | 75.0% | |
| AGGCCGCCGGATCCGCATGC+CGG | + | chr5_4:313908-313927 | Msa0828050:CDS | 75.0% | |
| AGGCCGCCGGCATGCGGATC+CGG | - | chr5_4:313917-313936 | None:intergenic | 75.0% | |
| ACTCTGGCGGCACAGGCCGC+CGG | - | chr5_4:313930-313949 | None:intergenic | 75.0% | |
| ! | CCGGTCGCAGCGATGACGGC+TGG | - | chr5_4:314026-314045 | None:intergenic | 75.0% |
| ACCGCCACCGCCTCTGGTGG+CGG | + | chr5_4:314377-314396 | Msa0828050:CDS | 75.0% | |
| TCCGCCACCAGAGGCGGTGG+CGG | - | chr5_4:314381-314400 | None:intergenic | 75.0% | |
| TCCTCCGCCACCAGAGGCGG+TGG | - | chr5_4:314384-314403 | None:intergenic | 75.0% | |
| CACGGCGGAGGTGGAGGAGG+AGG | + | chr5_4:314872-314891 | Msa0828050:CDS | 75.0% | |
| ! | CCGCCGGCATGCGGATCCGG+CGG | - | chr5_4:313914-313933 | None:intergenic | 80.0% |
| ! | CCGCCGGATCCGCATGCCGG+CGG | + | chr5_4:313911-313930 | Msa0828050:CDS | 80.0% |
| ! | CGGCACAGGCCGCCGGCATG+CGG | - | chr5_4:313923-313942 | None:intergenic | 80.0% |
| !!! | GCCACCGCCTCTGGTGGCGG+AGG | + | chr5_4:314380-314399 | Msa0828050:CDS | 80.0% |
| ! | CCGCCGGCATGCGGATCCGG+CGG | - | chr5_4:313914-313933 | None:intergenic | 80.0% |
| ! | CCGCCGGATCCGCATGCCGG+CGG | + | chr5_4:313911-313930 | Msa0828050:CDS | 80.0% |
| ! | CGGCACAGGCCGCCGGCATG+CGG | - | chr5_4:313923-313942 | None:intergenic | 80.0% |
| !!! | GCCACCGCCTCTGGTGGCGG+AGG | + | chr5_4:314380-314399 | Msa0828050:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 313678 | 314931 | 313678 | ID=Msa0828050;Name=Msa0828050 |
| chr5_4 | mRNA | 313678 | 314931 | 313678 | ID=Msa0828050-mRNA-1;Parent=Msa0828050;Name=Msa0828050-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|417 |
| chr5_4 | exon | 313678 | 314931 | 313678 | ID=Msa0828050-mRNA-1:exon:26;Parent=Msa0828050-mRNA-1 |
| chr5_4 | CDS | 313678 | 314931 | 313678 | ID=Msa0828050-mRNA-1:cds;Parent=Msa0828050-mRNA-1 |
| Gene Sequence |
| Protein sequence |
