AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0309160


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0309160 MtrunA17_Chr2g0277651 96.386 830 27 2 1 827 1 830 0.0 1665
Msa0309160 MtrunA17_Chr4g0063141 48.006 652 329 5 44 689 28 675 0.0 632
Msa0309160 MtrunA17_Chr8g0356081 49.084 491 239 3 44 525 22 510 7.90e-168 502
Msa0309160 MtrunA17_Chr1g0148981 38.163 773 368 14 16 689 8 769 2.14e-163 501
Msa0309160 MtrunA17_Chr3g0138671 45.545 505 266 5 36 532 17 520 6.60e-146 443
Msa0309160 MtrunA17_Chr2g0286031 54.133 375 161 2 145 519 17 380 3.67e-140 430
Msa0309160 MtrunA17_Chr3g0138131 50.253 396 181 6 45 433 46 432 2.05e-131 400
Msa0309160 MtrunA17_Chr5g0434371 31.074 782 493 15 61 824 81 834 4.45e-117 374
Msa0309160 MtrunA17_Chr3g0138141 29.664 327 211 4 446 767 11 323 1.57e-38 149
Msa0309160 MtrunA17_Chr4g0063071 31.034 232 151 3 286 508 5 236 3.15e-27 111
Msa0309160 MtrunA17_Chr4g0062561 29.670 273 178 5 92 363 1 260 4.69e-27 118
Msa0309160 MtrunA17_Chr2g0286041 50.476 105 51 1 40 144 29 132 9.61e-27 106
Msa0309160 MtrunA17_Chr4g0062571 32.456 228 138 6 92 318 1 213 7.49e-25 103
Msa0309160 MtrunA17_Chr5g0405531 69.811 53 13 1 256 305 14 66 5.12e-16 77.4
Msa0309160 MtrunA17_Chr8g0347121 24.444 315 200 8 166 459 242 539 8.48e-16 82.0
Msa0309160 MtrunA17_Chr3g0126541 20.704 483 302 15 105 514 135 609 2.02e-15 80.5
Msa0309160 MtrunA17_Chr1g0158861 19.963 541 341 15 58 514 79 611 2.17e-15 80.5
Msa0309160 MtrunA17_Chr1g0181121 20.000 485 308 12 103 514 95 572 2.84e-15 80.1
Msa0309160 MtrunA17_Chr4g0001481 23.810 210 155 3 253 459 375 582 4.54e-15 79.7
Msa0309160 MtrunA17_Chr4g0063081 28.788 198 126 6 74 264 3 192 1.69e-14 73.2
Msa0309160 MtrunA17_Chr6g0461061 27.442 215 109 6 509 689 255 456 2.12e-12 70.5
Msa0309160 MtrunA17_Chr1g0196261 28.947 152 98 1 541 692 261 402 2.68e-12 70.1
Msa0309160 MtrunA17_Chr4g0073941 23.497 183 139 1 259 440 374 556 2.91e-12 70.5
Msa0309160 MtrunA17_Chr4g0009161 41.975 81 46 1 445 525 14 93 1.07e-11 65.5
Msa0309160 MtrunA17_Chr7g0274241 31.447 159 102 3 530 682 114 271 1.36e-11 67.8
Msa0309160 MtrunA17_Chr4g0028861 21.970 264 194 6 259 515 395 653 8.07e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0309160 AT4G22200.1 68.364 825 216 8 12 825 11 801 0.0 1129
Msa0309160 AT4G22200.2 73.730 571 135 6 12 570 11 578 0.0 858
Msa0309160 AT2G26650.1 41.444 859 434 12 22 824 12 857 0.0 660
Msa0309160 AT4G32500.1 39.863 873 457 12 10 822 14 878 0.0 625
Msa0309160 AT2G25600.1 45.549 674 348 7 27 689 35 700 0.0 603
Msa0309160 AT2G26650.2 40.999 761 384 10 120 824 1 752 0.0 578
Msa0309160 AT5G46240.1 47.810 548 274 4 40 587 29 564 2.62e-178 529
Msa0309160 AT4G18290.1 52.599 481 226 2 40 520 29 507 2.58e-174 519
Msa0309160 AT4G18290.2 52.599 481 226 2 40 520 40 518 4.99e-174 519
Msa0309160 AT4G32650.1 46.791 483 253 4 36 515 51 532 1.07e-136 421
Msa0309160 AT4G32650.3 46.791 483 253 4 36 515 51 532 1.35e-136 421
Msa0309160 AT4G32650.2 46.791 483 253 4 36 515 51 532 2.11e-136 418
Msa0309160 AT5G37500.1 32.739 785 487 17 61 826 56 818 1.11e-126 400
Msa0309160 AT5G37500.2 31.846 807 487 18 61 826 56 840 1.93e-121 387
Msa0309160 AT3G02850.1 31.458 782 498 16 58 824 70 828 5.28e-120 382
Msa0309160 AT5G37500.3 31.830 798 481 18 70 826 11 786 9.48e-120 380
Msa0309160 AT3G02850.2 33.696 644 406 10 58 689 70 704 2.39e-115 368
Msa0309160 AT5G37500.4 33.784 666 392 14 61 689 56 709 6.12e-112 358
Msa0309160 AT3G02850.3 34.667 525 322 10 58 570 70 585 2.32e-95 310
Msa0309160 AT5G57940.1 23.913 184 139 1 258 440 365 548 8.17e-13 72.8
Msa0309160 AT5G57940.2 23.913 184 139 1 258 440 365 548 8.17e-13 72.8
Msa0309160 AT2G23980.9 23.497 183 139 1 259 440 382 564 8.26e-13 72.8
Msa0309160 AT2G23980.10 23.497 183 139 1 259 440 382 564 8.26e-13 72.8
Msa0309160 AT2G23980.1 23.497 183 139 1 259 440 382 564 8.26e-13 72.8
Msa0309160 AT2G23980.4 23.497 183 139 1 259 440 382 564 8.26e-13 72.8
Msa0309160 AT2G23980.5 23.497 183 139 1 259 440 382 564 8.26e-13 72.8
Msa0309160 AT5G57940.3 23.913 184 139 1 258 440 358 541 8.77e-13 72.8
Msa0309160 AT2G23980.6 23.497 183 139 1 259 440 355 537 9.01e-13 72.4
Msa0309160 AT2G23980.3 23.497 183 139 1 259 440 405 587 9.91e-13 72.4
Msa0309160 AT2G23980.2 23.497 183 139 1 259 440 405 587 9.91e-13 72.4
Msa0309160 AT2G23980.8 23.497 183 139 1 259 440 405 587 9.91e-13 72.4
Msa0309160 AT2G23980.7 23.497 183 139 1 259 440 405 587 9.91e-13 72.4
Msa0309160 AT4G30560.5 23.039 204 154 2 259 459 355 558 2.47e-12 71.2
Msa0309160 AT4G30560.2 23.039 204 154 2 259 459 355 558 2.47e-12 71.2
Msa0309160 AT4G30560.3 23.039 204 154 2 259 459 355 558 2.47e-12 71.2
Msa0309160 AT4G30560.1 23.039 204 154 2 259 459 381 584 2.58e-12 71.2
Msa0309160 AT4G30560.4 23.039 204 154 2 259 459 381 584 2.58e-12 71.2
Msa0309160 AT5G53130.1 21.212 264 194 6 259 514 354 611 8.29e-12 69.3
Msa0309160 AT2G46430.1 21.970 264 194 5 259 516 345 602 1.15e-11 68.9
Msa0309160 AT2G46430.2 21.970 264 194 5 259 516 345 602 1.15e-11 68.9
Msa0309160 AT1G19780.2 21.569 204 157 2 259 459 165 368 1.94e-11 67.8
Msa0309160 AT1G15990.1 21.569 204 157 2 259 459 370 573 3.57e-11 67.4
Msa0309160 AT1G19780.1 21.569 204 157 2 259 459 376 579 4.07e-11 67.4
Msa0309160 AT2G28260.1 21.970 264 192 6 259 514 339 596 6.79e-11 66.6
Msa0309160 AT5G15410.1 24.535 269 190 6 247 511 387 646 9.72e-11 65.9

Find 136 sgRNAs with CRISPR-Local

Find 416 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTAGGAATGCTCAGATTT+TGG 0.159603 2_4:-3601665 Msa0309160:CDS
ACATCAGGTTCAGCTATTTC+TGG 0.198095 2_4:-3601516 Msa0309160:CDS
ACAATATATAGTTTCCTATT+TGG 0.215703 2_4:+3604835 None:intergenic
TTACATGTGTTTGAGATTTA+AGG 0.223816 2_4:-3600860 Msa0309160:CDS
GATATATTTCGGCTATTTAT+TGG 0.227129 2_4:-3601243 Msa0309160:CDS
TTTGAGTATCAAAGATTTAA+TGG 0.236263 2_4:-3600012 Msa0309160:CDS
CATCTTCATCTTTCAATCTA+AGG 0.250699 2_4:-3605796 Msa0309160:CDS
AAGAAGAACAGAAGCAGATT+TGG 0.263100 2_4:-3598951 Msa0309160:CDS
GCCTAGTGAGTATGTATTAA+AGG 0.268009 2_4:-3598983 Msa0309160:CDS
TTGAAGCTGGAAAGTTAATA+AGG 0.269326 2_4:-3598849 Msa0309160:CDS
AAATTGCTCTCCATTATTCT+TGG 0.270259 2_4:+3605896 None:intergenic
TCATGCACTCTTCTCCAAAT+AGG 0.277810 2_4:-3604849 Msa0309160:CDS
CCTCTTTCTCTTCTCACTAC+TGG 0.287529 2_4:+3598877 None:intergenic
ACCTTGGAGGCAACCGATTT+CGG 0.300414 2_4:+3600902 None:intergenic
CCCTCATTCACCAAGAATAA+TGG 0.300734 2_4:-3605906 Msa0309160:exon
CAGAATTCAGTTTGCTCAAA+AGG 0.301833 2_4:-3605731 Msa0309160:CDS
ACATGCAACATACATATAAA+AGG 0.309366 2_4:-3599462 Msa0309160:intron
CCCTCGGATTAGATATATTT+CGG 0.310670 2_4:-3601254 Msa0309160:CDS
AGTCTACCTTACTACCTCTT+AGG 0.314962 2_4:-3601681 Msa0309160:CDS
TTGAGCTTCTCTAATGAATC+AGG 0.315266 2_4:+3598823 None:intergenic
AGAAGAACAGAAGCAGATTT+GGG 0.323990 2_4:-3598950 Msa0309160:CDS
CAAAACATCACTCAATATTC+AGG 0.328587 2_4:-3599320 Msa0309160:CDS
TGCATGATTACATCCTCTTT+AGG 0.345609 2_4:+3600410 None:intergenic
GGGCTTGTCTCTCTGAAGTT+TGG 0.349117 2_4:+3601274 None:intergenic
GGCCTAACTGCTTACTTGAT+TGG 0.352928 2_4:-3601124 Msa0309160:CDS
GCAGCATTTCAAGCAGCTTA+AGG 0.358860 2_4:-3600036 Msa0309160:intron
CAGATTTGGGGAAGATATAA+TGG 0.360704 2_4:-3598937 Msa0309160:CDS
TTCTTCGTCGCATACGTAGA+TGG 0.370898 2_4:-3604766 Msa0309160:CDS
AAGTTGGTGCACTTTGTTGT+AGG 0.381347 2_4:-3600271 Msa0309160:CDS
TTCTACATGCTCTTCAACCT+TGG 0.382767 2_4:-3601145 Msa0309160:CDS
AACAAATTCACAGCCATGTT+AGG 0.383420 2_4:+3599966 None:intergenic
CAGAAGCTGTGTTAGAGTCT+TGG 0.386691 2_4:+3600226 None:intergenic
GAGAAGCTCAAAATTATTGC+AGG 0.389605 2_4:-3598811 Msa0309160:intron
ATTCTGCAGAAACGCGAAAT+CGG 0.389644 2_4:-3599033 Msa0309160:CDS
CTAACAACTGGAGACATGTT+TGG 0.390676 2_4:-3600296 Msa0309160:CDS
CTGCAGAATTTCATTTAAGA+TGG 0.391532 2_4:+3599047 None:intergenic
ATAATGAAGAAGAATAATAT+TGG 0.405347 2_4:+3605968 None:intergenic
CATCAGGTTCAGCTATTTCT+GGG 0.410742 2_4:-3601515 Msa0309160:CDS
GGAGCTTCTAAGAGCTGGTT+TGG 0.417673 2_4:-3599907 Msa0309160:CDS
CAGCACATAGCTGCATCAAA+TGG 0.427788 2_4:-3599519 Msa0309160:CDS
ATGACAAATCTTGTTGTTGA+AGG 0.429751 2_4:-3601097 Msa0309160:CDS
ACTATACCATATGAAGCAAT+AGG 0.431353 2_4:-3601732 Msa0309160:CDS
GAAAGAGGTTTCATTGAAGC+TGG 0.432526 2_4:-3598862 Msa0309160:CDS
TCCATTATTCTTGGTGAATG+AGG 0.439323 2_4:+3605905 None:intergenic
CTCGAGGAGCTTCTAAGAGC+TGG 0.442942 2_4:-3599912 Msa0309160:CDS
AAGTAGCCTATTGCTTCATA+TGG 0.443165 2_4:+3601726 None:intergenic
CATTGCTTCTATAAGATCAC+TGG 0.444377 2_4:+3600193 None:intergenic
AGCATTCCTAAGAGGTAGTA+AGG 0.447195 2_4:+3601675 None:intergenic
CTCTTTCTCTTCTCACTACT+GGG 0.447423 2_4:+3598878 None:intergenic
AATAATCTTCTTTAACATCA+TGG 0.450043 2_4:+3605825 None:intergenic
AATCTCTTACTAGGGACAAA+AGG 0.450352 2_4:+3600710 None:intergenic
CTTGTCAACATGGTTCCTAA+TGG 0.452648 2_4:-3601766 Msa0309160:CDS
TAGTTGATGCCACATCCATT+AGG 0.456566 2_4:+3601751 None:intergenic
ACTAAAATATAAACATCATC+TGG 0.457707 2_4:+3600377 None:intergenic
TTTGGTAGCTTATTCTGCAT+GGG 0.460459 2_4:-3604893 Msa0309160:CDS
CCTCTATATATGCTTACTCT+TGG 0.468020 2_4:+3598904 None:intergenic
AGGAGATTGCCTGCTGTGTA+TGG 0.474283 2_4:+3599267 None:intergenic
ATTCAGTTTGCTCAAAAGGC+TGG 0.475995 2_4:-3605727 Msa0309160:CDS
AAAAGCAGCATTGCCCGTGC+TGG 0.477728 2_4:+3599935 None:intergenic
ATGCCTTTGCAAATTGACTT+TGG 0.487312 2_4:+3600799 None:intergenic
CACCAATGGATTCTAGATAC+AGG 0.487320 2_4:-3605697 Msa0309160:intron
CATGAAGGAAAGACATGGAT+TGG 0.492441 2_4:-3601307 Msa0309160:CDS
TTGTTAACTGTGGCCAGCAC+GGG 0.493877 2_4:-3599948 Msa0309160:CDS
AGATAGACTTTCTCTACAGT+TGG 0.494483 2_4:+3600757 None:intergenic
TTCTTGGTGAATGAGGGAAA+TGG 0.496381 2_4:+3605912 None:intergenic
TTAAAGATGAAAAGAAAGAA+AGG 0.499281 2_4:+3605991 None:intergenic
AAGCTCATTCTTCCACCACT+TGG 0.499728 2_4:-3605764 Msa0309160:CDS
AGATTTAATGGTGGAAAATG+TGG 0.502148 2_4:-3600000 Msa0309160:CDS
ATCTCAAACACATGTAAGCC+AGG 0.506236 2_4:+3600866 None:intergenic
ATCCATGTCTTTCCTTCATG+AGG 0.507560 2_4:+3601310 None:intergenic
TGCATGAAAGCAACTTCAAA+GGG 0.510447 2_4:+3604865 None:intergenic
GTTCAGTTGCTTGTCATGAA+CGG 0.510748 2_4:-3599111 Msa0309160:CDS
AAAATCTGAGCATTCCTAAG+AGG 0.515366 2_4:+3601667 None:intergenic
GCCGAAATCGGTTGCCTCCA+AGG 0.520226 2_4:-3600903 Msa0309160:CDS
CAATAATTGGCAGATATGAA+TGG 0.520868 2_4:-3599372 Msa0309160:intron
CCATTATTCTTGGTGAATGA+GGG 0.521100 2_4:+3605906 None:intergenic
AATAATGAAAATCATTTCCA+TGG 0.522992 2_4:+3601168 None:intergenic
AGCACATAGCTGCATCAAAT+GGG 0.523495 2_4:-3599518 Msa0309160:CDS
ACCATGACAACTGTTGGTTA+TGG 0.524484 2_4:-3601211 Msa0309160:CDS
GTGACATACAGAAAGAAGTC+TGG 0.527667 2_4:+3601483 None:intergenic
CCAGTAGTGAGAAGAGAAAG+AGG 0.530706 2_4:-3598877 Msa0309160:CDS
GCTGGTTTGGATCCTGACAT+TGG 0.531546 2_4:-3599894 Msa0309160:CDS
TGAATGGTGACAATGCACTA+TGG 0.532424 2_4:-3599356 Msa0309160:CDS
GGAGACATGTTTGGAGAAGT+TGG 0.533278 2_4:-3600287 Msa0309160:CDS
TATCAGCTAGCATGTAATAG+AGG 0.535299 2_4:+3601338 None:intergenic
AGTAATTCTTACAAATTCCA+TGG 0.539012 2_4:+3601063 None:intergenic
TAAAGATGAAAAGAAAGAAA+GGG 0.539961 2_4:+3605992 None:intergenic
AGAGTACATACCACCTAAAG+AGG 0.540424 2_4:-3600423 Msa0309160:CDS
GAGAAAGTCTATCTCTTCAA+AGG 0.541403 2_4:-3600748 Msa0309160:CDS
GTGCATGAAAGCAACTTCAA+AGG 0.548004 2_4:+3604864 None:intergenic
AAAGAGCAGATAGCTGATAG+AGG 0.548443 2_4:+3599295 None:intergenic
AAGGTTAAAAGAGCAGATCC+TGG 0.552115 2_4:-3600884 Msa0309160:CDS
GCAGGCTTGAGAAAGACATC+AGG 0.553572 2_4:-3601531 Msa0309160:intron
TTTGTTAACTGTGGCCAGCA+CGG 0.553820 2_4:-3599949 Msa0309160:CDS
CTTTCTGATCCATACACAGC+AGG 0.558919 2_4:-3599276 Msa0309160:CDS
AACAGTTGTCATGGTAGTGA+TGG 0.561364 2_4:+3601219 None:intergenic
CATTAGTGCTACATATAGCT+AGG 0.565623 2_4:-3606063 Msa0309160:five_prime_UTR
AGGCTGGATCATATCACCAA+TGG 0.568421 2_4:-3605711 Msa0309160:CDS
GACAGCTATCCAAATTGCTA+TGG 0.571064 2_4:-3599154 Msa0309160:CDS
AAATAGGAAACTATATATTG+TGG 0.571721 2_4:-3604833 Msa0309160:CDS
ATCACTACCATGACAACTGT+TGG 0.583381 2_4:-3601217 Msa0309160:CDS
ACCATAACCAACAGTTGTCA+TGG 0.583525 2_4:+3601210 None:intergenic
GCCGAAATATATCTAATCCG+AGG 0.586677 2_4:+3601253 None:intergenic
ATGATTACATCCTCTTTAGG+TGG 0.587618 2_4:+3600413 None:intergenic
GCTGATATGTACCCTCATGA+AGG 0.587871 2_4:-3601322 Msa0309160:CDS
ACAATGGTGACAAATGAAGA+AGG 0.595250 2_4:-3598464 Msa0309160:CDS
TACCTGTATCTAGAATCCAT+TGG 0.598520 2_4:+3605695 None:intergenic
TCAAGTAAGCAGTTAGGCCA+AGG 0.601963 2_4:+3601128 None:intergenic
CCGAAATATATCTAATCCGA+GGG 0.602786 2_4:+3601254 None:intergenic
CCAAGAGTAAGCATATATAG+AGG 0.605074 2_4:-3598904 Msa0309160:CDS
GAGTATCAAAGATTTAATGG+TGG 0.606579 2_4:-3600009 Msa0309160:CDS
GGCAGAAAATCATGTGGACA+TGG 0.607182 2_4:-3599133 Msa0309160:CDS
TCCATGTCTTTCCTTCATGA+GGG 0.608602 2_4:+3601311 None:intergenic
TGCTATGGCAGAAAATCATG+TGG 0.613651 2_4:-3599139 Msa0309160:CDS
AGCTATATGTAGCACTAATG+TGG 0.619663 2_4:+3606066 None:intergenic
GGAGGAAGACGATCCTAACA+TGG 0.626905 2_4:-3599979 Msa0309160:CDS
TAATACATACTCACTAGGCA+TGG 0.628449 2_4:+3598987 None:intergenic
AACATGGTTCCTAATGGATG+TGG 0.629876 2_4:-3601760 Msa0309160:CDS
TACCAATCAAGTAAGCAGTT+AGG 0.631238 2_4:+3601122 None:intergenic
ACCTTTAATACATACTCACT+AGG 0.632039 2_4:+3598982 None:intergenic
ATGCTAGAGTCTAAGTCATG+AGG 0.634864 2_4:+3605860 None:intergenic
CTACCAAAGTCAATTTGCAA+AGG 0.635237 2_4:-3600802 Msa0309160:CDS
GTGTCAAGCAATTCTTCACA+AGG 0.635692 2_4:-3601632 Msa0309160:intron
GAGACAGGTACTTGTCAACA+TGG 0.642538 2_4:-3601776 Msa0309160:intron
TTTAATGGTGGAAAATGTGG+AGG 0.648940 2_4:-3599997 Msa0309160:CDS
GTTCTGTATGTAAAACTCTG+AGG 0.652805 2_4:+3600248 None:intergenic
TGAAGGAACTCGTCGCACCA+TGG 0.655001 2_4:-3601080 Msa0309160:CDS
ACATCTAATTAATGTGAGTG+AGG 0.655673 2_4:-3599010 Msa0309160:CDS
GAAGAACAGAAGCAGATTTG+GGG 0.656031 2_4:-3598949 Msa0309160:CDS
GTTTGATGCAAAAGATACAA+TGG 0.657320 2_4:-3598480 Msa0309160:CDS
TCTTCATGCTGTCAACACCA+TGG 0.661096 2_4:-3601185 Msa0309160:CDS
GGCTGTGAATTTGTTAACTG+TGG 0.662660 2_4:-3599958 Msa0309160:CDS
ACTTCAGAGAGACAAGCCCT+CGG 0.672053 2_4:-3601270 Msa0309160:CDS
GAAAGGGTAAGCTCAACACA+AGG 0.676119 2_4:+3606008 None:intergenic
ACCCTCATGAAGGAAAGACA+TGG 0.681708 2_4:-3601312 Msa0309160:CDS
ATTGACTCAAAAGATCGACA+TGG 0.721906 2_4:-3599180 Msa0309160:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAACATAAAATTTTTTTTCT+TGG + chr2_4:3599047-3599066 None:intergenic 10.0%
!! GTAAAAAATTAATTAGTATA+AGG + chr2_4:3599720-3599739 None:intergenic 10.0%
!!! TTTGTCTTTTTTTTTTTTTT+TGG - chr2_4:3599741-3599760 Msa0309160:intron 10.0%
!!! AATATTAAATTGTTTTTTGA+AGG + chr2_4:3599982-3600001 None:intergenic 10.0%
!!! ATTTGTTTCTTAATAAAAAA+TGG + chr2_4:3600730-3600749 None:intergenic 10.0%
!!! TTTTATTAAGAAACAAATTA+AGG - chr2_4:3600732-3600751 Msa0309160:CDS 10.0%
!!! AAAAATTGAGATTTTTTAAA+GGG - chr2_4:3600993-3601012 Msa0309160:intron 10.0%
!!! AGAAATAGTTAATTTTTAAA+AGG - chr2_4:3601901-3601920 Msa0309160:intron 10.0%
!! AACAAACATATAATATAATA+AGG - chr2_4:3602513-3602532 Msa0309160:intron 10.0%
!!! ATATTTAACTTAACAATAAT+TGG - chr2_4:3605000-3605019 Msa0309160:intron 10.0%
!! TAAAAAAAAAATTGAACTTT+GGG + chr2_4:3606204-3606223 None:intergenic 10.0%
!! TTAAAAAAAAAATTGAACTT+TGG + chr2_4:3606205-3606224 None:intergenic 10.0%
!! ATAATGAAGAAGAATAATAT+TGG + chr2_4:3598420-3598439 None:intergenic 15.0%
!!! TTATTCTTCTTCATTATTTT+AGG - chr2_4:3598423-3598442 Msa0309160:CDS 15.0%
!!! ATTTTATATTGATTCCTTTT+AGG - chr2_4:3598778-3598797 Msa0309160:intron 15.0%
!! CGATAATTTAACAAAAAATT+AGG - chr2_4:3598860-3598879 Msa0309160:CDS 15.0%
!! ATAAGTTAAGAAACTAAAAA+TGG - chr2_4:3598953-3598972 Msa0309160:CDS 15.0%
!!! TTTTTTAAAAGGGTTAAAAT+TGG + chr2_4:3600328-3600347 None:intergenic 15.0%
!!! ACATGAATTGTTAATTTTTT+GGG + chr2_4:3600604-3600623 None:intergenic 15.0%
!!! TACATGAATTGTTAATTTTT+TGG + chr2_4:3600605-3600624 None:intergenic 15.0%
!!! GAAAAATTGAGATTTTTTAA+AGG - chr2_4:3600992-3601011 Msa0309160:intron 15.0%
!!! ATTTTTTAAAGGGTTAAAAT+TGG - chr2_4:3601003-3601022 Msa0309160:intron 15.0%
!!! AAAAATTTAAGACATTTTTC+AGG + chr2_4:3601310-3601329 None:intergenic 15.0%
!!! AGAATGATTTTGTATATTTT+AGG - chr2_4:3602160-3602179 Msa0309160:intron 15.0%
!!! GAATGATTTTGTATATTTTA+GGG - chr2_4:3602161-3602180 Msa0309160:intron 15.0%
!!! AAGTATTTGAACATTTTATT+GGG + chr2_4:3602345-3602364 None:intergenic 15.0%
!! TTTCATTCTCTTAAATTATT+AGG - chr2_4:3604703-3604722 Msa0309160:intron 15.0%
!! AAAAGTCAAAACTATATTAA+AGG + chr2_4:3604791-3604810 None:intergenic 15.0%
!! AAATATATGTCTTAAGTTAA+AGG + chr2_4:3604952-3604971 None:intergenic 15.0%
!! AAAAAAAAAATTGAACTTTG+GGG + chr2_4:3606203-3606222 None:intergenic 15.0%
!!! TATCAAAACAACATTTTCAT+TGG - chr2_4:3598285-3598304 Msa0309160:three_prime_UTR 20.0%
!!! ATCAAAACAACATTTTCATT+GGG - chr2_4:3598286-3598305 Msa0309160:three_prime_UTR 20.0%
!! TAAAGATGAAAAGAAAGAAA+GGG + chr2_4:3598396-3598415 None:intergenic 20.0%
!! TTAAAGATGAAAAGAAAGAA+AGG + chr2_4:3598397-3598416 None:intergenic 20.0%
!! AATAATCTTCTTTAACATCA+TGG + chr2_4:3598563-3598582 None:intergenic 20.0%
!! AGTATAATATTAAGAGACAA+AGG + chr2_4:3598746-3598765 None:intergenic 20.0%
!! AAGTTAAGTATTTACCTAAA+AGG + chr2_4:3598795-3598814 None:intergenic 20.0%
!! TTAGTGTATGTTTGAATTTA+CGG - chr2_4:3598817-3598836 Msa0309160:CDS 20.0%
!!! TAACTACTAGCATTAATTTT+AGG - chr2_4:3598904-3598923 Msa0309160:CDS 20.0%
!!! AACTACTAGCATTAATTTTA+GGG - chr2_4:3598905-3598924 Msa0309160:CDS 20.0%
!! GTTAACTTTATATACTATGA+GGG + chr2_4:3599133-3599152 None:intergenic 20.0%
!! AGTTAACTTTATATACTATG+AGG + chr2_4:3599134-3599153 None:intergenic 20.0%
!! ACAATATATAGTTTCCTATT+TGG + chr2_4:3599553-3599572 None:intergenic 20.0%
!! AAATAGGAAACTATATATTG+TGG - chr2_4:3599552-3599571 Msa0309160:intron 20.0%
!! TAATTAGTATAAGGTTTGAA+TGG + chr2_4:3599711-3599730 None:intergenic 20.0%
!! TATGTAAACGTCTAAATTAA+TGG - chr2_4:3599838-3599857 Msa0309160:intron 20.0%
!! CTGAATTAATTATTGTATAG+TGG - chr2_4:3599875-3599894 Msa0309160:CDS 20.0%
!! AATTAATTATTGTATAGTGG+AGG - chr2_4:3599878-3599897 Msa0309160:CDS 20.0%
!! TGCTAAACAAAATAAATAAG+TGG + chr2_4:3600042-3600061 None:intergenic 20.0%
!! TTATGTAACACCTAAAATAA+TGG - chr2_4:3600074-3600093 Msa0309160:intron 20.0%
!! TATGTAACACCTAAAATAAT+GGG - chr2_4:3600075-3600094 Msa0309160:intron 20.0%
!! TGGTAATATTGAAATGAAAA+AGG - chr2_4:3600208-3600227 Msa0309160:CDS 20.0%
!! TTCCGAGATATTATTATATT+CGG + chr2_4:3600250-3600269 None:intergenic 20.0%
!!! TTTTTGGGAGAAAAAAATTA+GGG + chr2_4:3600589-3600608 None:intergenic 20.0%
!!! TTTTTTGGGAGAAAAAAATT+AGG + chr2_4:3600590-3600609 None:intergenic 20.0%
!! AAGAATTCAATTCAATTGAT+TGG + chr2_4:3600670-3600689 None:intergenic 20.0%
!! AATAAAAAATGGTAATCTCA+AGG + chr2_4:3600719-3600738 None:intergenic 20.0%
!! TTCAAATAAGTTGTAAAGTA+CGG - chr2_4:3600805-3600824 Msa0309160:CDS 20.0%
!! ATCACATTAAGAACAAAATT+TGG + chr2_4:3600882-3600901 None:intergenic 20.0%
!!! TGGTATTTTCAATTATTTGT+TGG - chr2_4:3601023-3601042 Msa0309160:intron 20.0%
!!! AAGAATAAGAATTTGGAATT+TGG + chr2_4:3601186-3601205 None:intergenic 20.0%
!! AAATTCCAAATTCTTATTCT+TGG - chr2_4:3601185-3601204 Msa0309160:CDS 20.0%
!! ATATCAAAGTTATCAAACTT+AGG + chr2_4:3601240-3601259 None:intergenic 20.0%
!! ACTATCGTTAATCATTATTA+AGG + chr2_4:3601334-3601353 None:intergenic 20.0%
!! ATCAGATATATATATTTAGG+GGG + chr2_4:3601516-3601535 None:intergenic 20.0%
!! CATCAGATATATATATTTAG+GGG + chr2_4:3601517-3601536 None:intergenic 20.0%
!! CCATCAGATATATATATTTA+GGG + chr2_4:3601518-3601537 None:intergenic 20.0%
!! ACCATCAGATATATATATTT+AGG + chr2_4:3601519-3601538 None:intergenic 20.0%
!! ATAACTATGATGTGTATTTA+TGG - chr2_4:3601584-3601603 Msa0309160:intron 20.0%
!! TTATGGAACCTTAAATATAT+TGG - chr2_4:3601601-3601620 Msa0309160:intron 20.0%
!! AAATATTGAAACAAATCAGT+GGG - chr2_4:3601637-3601656 Msa0309160:CDS 20.0%
!!! CAAGTATTTGAACATTTTAT+TGG + chr2_4:3602346-3602365 None:intergenic 20.0%
!!! GAAAATTGATTTAATTTCCT+TGG - chr2_4:3602832-3602851 Msa0309160:intron 20.0%
!! AGTGATTATGTTGAAAATTA+TGG - chr2_4:3602987-3603006 Msa0309160:intron 20.0%
!! AATAATGAAAATCATTTCCA+TGG + chr2_4:3603220-3603239 None:intergenic 20.0%
!!! TGTACTAATGCATAAAATTT+TGG - chr2_4:3603420-3603439 Msa0309160:intron 20.0%
!! CAAAATTTAATCTCTTACTA+GGG + chr2_4:3603686-3603705 None:intergenic 20.0%
!! TCAAAATTTAATCTCTTACT+AGG + chr2_4:3603687-3603706 None:intergenic 20.0%
!!! TTGATTTTTACACTTCTATA+TGG - chr2_4:3603703-3603722 Msa0309160:intron 20.0%
!! ACTAAAATATAAACATCATC+TGG + chr2_4:3604011-3604030 None:intergenic 20.0%
!! TTTGAGTATCAAAGATTTAA+TGG - chr2_4:3604373-3604392 Msa0309160:intron 20.0%
!! AAAACTATAAACTTAACTGT+TGG - chr2_4:3604835-3604854 Msa0309160:CDS 20.0%
!! CACAAATAAAATCATAAATC+AGG + chr2_4:3605864-3605883 None:intergenic 20.0%
!!! TGATTTTATTTGTGTACAAT+AGG - chr2_4:3605870-3605889 Msa0309160:CDS 20.0%
!!! TCTTTTTTGTTTTTCATTGT+TGG - chr2_4:3606062-3606081 Msa0309160:five_prime_UTR 20.0%
!!! ATGTTGTTTTGATATATAGC+TGG + chr2_4:3598279-3598298 None:intergenic 25.0%
!!! TTCTCATCACTTTTTCTAAT+TGG + chr2_4:3600129-3600148 None:intergenic 25.0%
! GATATTATTATATTCGGGAA+TGG + chr2_4:3600244-3600263 None:intergenic 25.0%
! TCCCGAATATAATAATATCT+CGG - chr2_4:3600245-3600264 Msa0309160:CDS 25.0%
! TCCGAGATATTATTATATTC+GGG + chr2_4:3600249-3600268 None:intergenic 25.0%
!!! GTATTTTCAATAGTTTGTAG+GGG + chr2_4:3600306-3600325 None:intergenic 25.0%
!!! GGTATTTTCAATAGTTTGTA+GGG + chr2_4:3600307-3600326 None:intergenic 25.0%
!!! TGGTATTTTCAATAGTTTGT+AGG + chr2_4:3600308-3600327 None:intergenic 25.0%
!!! GTGGGTATGATTTTTTAAAA+GGG + chr2_4:3600338-3600357 None:intergenic 25.0%
!!! AGTGGGTATGATTTTTTAAA+AGG + chr2_4:3600339-3600358 None:intergenic 25.0%
!!! CTTTGTTGTTGTTTGAATAA+GGG + chr2_4:3600484-3600503 None:intergenic 25.0%
!!! ACTTTGTTGTTGTTTGAATA+AGG + chr2_4:3600485-3600504 None:intergenic 25.0%
! TATTGATGTTATGAAGAGAT+TGG + chr2_4:3600531-3600550 None:intergenic 25.0%
! TTCATGTAAAATACTAGTGA+TGG - chr2_4:3600617-3600636 Msa0309160:intron 25.0%
! AGAGAGATAAAGAAAAATTG+TGG - chr2_4:3600776-3600795 Msa0309160:CDS 25.0%
! AGTGATAAAGAAAAACTACA+CGG - chr2_4:3600924-3600943 Msa0309160:CDS 25.0%
!! TCAATTATTTGTTGGAGTAA+AGG - chr2_4:3601031-3601050 Msa0309160:intron 25.0%
! ATAAGAGAATGTGAGATATT+AGG + chr2_4:3601086-3601105 None:intergenic 25.0%
! ATCAAACTTAGGTTCAAATT+AGG + chr2_4:3601229-3601248 None:intergenic 25.0%
!!! ATTTAAGACATTTTTCAGGT+TGG + chr2_4:3601306-3601325 None:intergenic 25.0%
! AAAATTTCTGAACACAAATC+AGG - chr2_4:3601457-3601476 Msa0309160:intron 25.0%
! CCCTAAATATATATATCTGA+TGG - chr2_4:3601515-3601534 Msa0309160:CDS 25.0%
! CAAATATTGAAACAAATCAG+TGG - chr2_4:3601636-3601655 Msa0309160:CDS 25.0%
! TGCTTACTCTTCTAATTTAT+CGG - chr2_4:3601749-3601768 Msa0309160:CDS 25.0%
!! AGTATTTCCCTTTAAAGAAT+AGG - chr2_4:3601996-3602015 Msa0309160:intron 25.0%
!! ATCATTTTCATTTCTCACAT+GGG + chr2_4:3602102-3602121 None:intergenic 25.0%
!! TATCATTTTCATTTCTCACA+TGG + chr2_4:3602103-3602122 None:intergenic 25.0%
!!! TGTATATTTTAGGGAAAGAA+TGG - chr2_4:3602170-3602189 Msa0309160:intron 25.0%
!! AATTTTCACACACATTCATA+TGG + chr2_4:3602819-3602838 None:intergenic 25.0%
! GATATATTTCGGCTATTTAT+TGG - chr2_4:3603142-3603161 Msa0309160:intron 25.0%
! AGTAATTCTTACAAATTCCA+TGG + chr2_4:3603325-3603344 None:intergenic 25.0%
!! TAAATGATAATGTGAAGTAG+TGG + chr2_4:3603354-3603373 None:intergenic 25.0%
!! TTACATGTGTTTGAGATTTA+AGG - chr2_4:3603525-3603544 Msa0309160:intron 25.0%
! AATTTAGTGAACGTTTGAAT+TGG + chr2_4:3603909-3603928 None:intergenic 25.0%
!!! GATGTTTATATTTTAGTGTC+AGG - chr2_4:3604014-3604033 Msa0309160:intron 25.0%
!! ATAGAGAAAGAGAGAATTTT+AGG - chr2_4:3604062-3604081 Msa0309160:intron 25.0%
! AATACTCAAAAATTTCCTTC+AGG - chr2_4:3604241-3604260 Msa0309160:intron 25.0%
!!! ATGATGTATAAGCTTTAGAA+TGG + chr2_4:3604310-3604329 None:intergenic 25.0%
! ACATGCAACATACATATAAA+AGG - chr2_4:3604923-3604942 Msa0309160:intron 25.0%
!!! TCTATGATTTCGTTTTTAGA+AGG - chr2_4:3604974-3604993 Msa0309160:intron 25.0%
!! GAAATCTAGTTGTTGTTAAA+TGG - chr2_4:3605752-3605771 Msa0309160:CDS 25.0%
! TGTACAATAGGTGAAAAATT+TGG - chr2_4:3605882-3605901 Msa0309160:CDS 25.0%
! GTACAATAGGTGAAAAATTT+GGG - chr2_4:3605883-3605902 Msa0309160:CDS 25.0%
!!! CAAACTTTTTTTTGTTGAAG+AGG - chr2_4:3605983-3606002 Msa0309160:five_prime_UTR 25.0%
!!! AACTTTTTTCTTTTGTCACA+AGG - chr2_4:3606096-3606115 Msa0309160:five_prime_UTR 25.0%
!! TACTTTTAATCTCTCTGTAA+TGG - chr2_4:3606160-3606179 Msa0309160:five_prime_UTR 25.0%
AAATTGCTCTCCATTATTCT+TGG + chr2_4:3598492-3598511 None:intergenic 30.0%
CATCTTCATCTTTCAATCTA+AGG - chr2_4:3598589-3598608 Msa0309160:intron 30.0%
ATATTAAGAGACAAAGGAGT+TGG + chr2_4:3598740-3598759 None:intergenic 30.0%
!! CATGTTAACTTGTACACTTA+AGG - chr2_4:3598929-3598948 Msa0309160:CDS 30.0%
!! ATATGTTAACTTGTGCCTTT+GGG + chr2_4:3599087-3599106 None:intergenic 30.0%
!! AATATGTTAACTTGTGCCTT+TGG + chr2_4:3599088-3599107 None:intergenic 30.0%
!! AGTCATTTCAACGTTGTTTT+TGG - chr2_4:3599297-3599316 Msa0309160:CDS 30.0%
! TTAAAGCAATCTTTTTGTGC+AGG - chr2_4:3599446-3599465 Msa0309160:intron 30.0%
!! GGAGAGTTTTATGGTTATTT+TGG - chr2_4:3599474-3599493 Msa0309160:CDS 30.0%
ATTCCAAAAAAATTGCTGTC+AGG - chr2_4:3599665-3599684 Msa0309160:intron 30.0%
!!! TTACCTGACAGCAATTTTTT+TGG + chr2_4:3599671-3599690 None:intergenic 30.0%
TAAGGTTTGAATGGAATATG+TGG + chr2_4:3599702-3599721 None:intergenic 30.0%
!! TGCAAAGTACCCATTATTTT+AGG + chr2_4:3600087-3600106 None:intergenic 30.0%
! TTAGTTTGGATTTAGGAGTA+AGG + chr2_4:3600418-3600437 None:intergenic 30.0%
! GCAGAAATTAGTTTGGATTT+AGG + chr2_4:3600425-3600444 None:intergenic 30.0%
!!! GGGATTGCTTTTTCTTAATA+TGG + chr2_4:3600569-3600588 None:intergenic 30.0%
AGTGTTCAAAAAGCTTCAAT+TGG + chr2_4:3600834-3600853 None:intergenic 30.0%
! TAGTTTTTCTTTATCACTGG+TGG + chr2_4:3600922-3600941 None:intergenic 30.0%
! GTGTAGTTTTTCTTTATCAC+TGG + chr2_4:3600925-3600944 None:intergenic 30.0%
! TGGAGTAAAGGTATAATTGT+CGG - chr2_4:3601043-3601062 Msa0309160:intron 30.0%
CCTATCCAAGAATAAGAATT+TGG + chr2_4:3601193-3601212 None:intergenic 30.0%
CCAAATTCTTATTCTTGGAT+AGG - chr2_4:3601190-3601209 Msa0309160:CDS 30.0%
AAAATCAACACCTGAATAGT+TGG + chr2_4:3601271-3601290 None:intergenic 30.0%
TGATTAACGATAGTAGTTGT+AGG - chr2_4:3601340-3601359 Msa0309160:CDS 30.0%
TAGATAAGATAATGAACACC+TGG - chr2_4:3601396-3601415 Msa0309160:intron 30.0%
!!! TAGACCCTCCAATATTTTTT+AGG - chr2_4:3601490-3601509 Msa0309160:intron 30.0%
TGGAACCTTAAATATATTGG+AGG - chr2_4:3601604-3601623 Msa0309160:intron 30.0%
GGAACCTTAAATATATTGGA+GGG - chr2_4:3601605-3601624 Msa0309160:intron 30.0%
TAGACCCTCCAATATATTTA+AGG + chr2_4:3601612-3601631 None:intergenic 30.0%
TGGGTACTAGAAAGTAAAAT+CGG - chr2_4:3601656-3601675 Msa0309160:CDS 30.0%
ATTAGAAGAGTAAGCAAAAC+TGG + chr2_4:3601745-3601764 None:intergenic 30.0%
TATCGGAACGTAATTTATGA+TGG - chr2_4:3601766-3601785 Msa0309160:CDS 30.0%
AATACTAACAAGTGCTCTAA+GGG + chr2_4:3601982-3602001 None:intergenic 30.0%
AAATACTAACAAGTGCTCTA+AGG + chr2_4:3601983-3602002 None:intergenic 30.0%
TGGATTGCCTATTCTTTAAA+GGG + chr2_4:3602006-3602025 None:intergenic 30.0%
TTGGATTGCCTATTCTTTAA+AGG + chr2_4:3602007-3602026 None:intergenic 30.0%
! TAGTTGCTCTATGAATCTTT+TGG + chr2_4:3602026-3602045 None:intergenic 30.0%
CAAATATTTGTGACCATGTA+AGG + chr2_4:3602217-3602236 None:intergenic 30.0%
CTTACATGGTCACAAATATT+TGG - chr2_4:3602215-3602234 Msa0309160:intron 30.0%
!! TGGTGTTATTGGAAAATACT+TGG + chr2_4:3602376-3602395 None:intergenic 30.0%
TTCATTCATCGTGTACAATT+TGG - chr2_4:3602433-3602452 Msa0309160:intron 30.0%
TCGTGTACAATTTGGATAAA+TGG - chr2_4:3602441-3602460 Msa0309160:intron 30.0%
ACTATACCATATGAAGCAAT+AGG - chr2_4:3602653-3602672 Msa0309160:intron 30.0%
! ATTGATTTAATTTCCTTGGC+AGG - chr2_4:3602836-3602855 Msa0309160:intron 30.0%
!! TAAATGCTTAGCTTTGACTA+GGG - chr2_4:3602944-3602963 Msa0309160:intron 30.0%
TATGTTGAAAATTATGGTGC+AGG - chr2_4:3602993-3603012 Msa0309160:intron 30.0%
! TATTTTCAGTTCATTGTGCT+GGG - chr2_4:3603022-3603041 Msa0309160:intron 30.0%
!! ATGACAAATCTTGTTGTTGA+AGG - chr2_4:3603288-3603307 Msa0309160:intron 30.0%
GCTTATTTGATCATATCCAT+TGG + chr2_4:3603887-3603906 None:intergenic 30.0%
TAAATTGTGAATGTGGTTGT+AGG - chr2_4:3603923-3603942 Msa0309160:intron 30.0%
GAGTATCAAAGATTTAATGG+TGG - chr2_4:3604376-3604395 Msa0309160:intron 30.0%
! AGATTTAATGGTGGAAAATG+TGG - chr2_4:3604385-3604404 Msa0309160:intron 30.0%
CTCAAAAGAAAAAACTCCAT+TGG - chr2_4:3604517-3604536 Msa0309160:intron 30.0%
CATGAAGGAACATCTTTAAA+AGG + chr2_4:3604570-3604589 None:intergenic 30.0%
CACATATATCAATGTCAAGT+CGG + chr2_4:3604668-3604687 None:intergenic 30.0%
CAATAATTGGCAGATATGAA+TGG - chr2_4:3605013-3605032 Msa0309160:intron 30.0%
CAAAACATCACTCAATATTC+AGG - chr2_4:3605065-3605084 Msa0309160:intron 30.0%
!!! ATGCATGAACTTTTAAAGCA+AGG - chr2_4:3605175-3605194 Msa0309160:intron 30.0%
CTGCAGAATTTCATTTAAGA+TGG + chr2_4:3605341-3605360 None:intergenic 30.0%
ACATCTAATTAATGTGAGTG+AGG - chr2_4:3605375-3605394 Msa0309160:intron 30.0%
ACCTTTAATACATACTCACT+AGG + chr2_4:3605406-3605425 None:intergenic 30.0%
TTGAAGCTGGAAAGTTAATA+AGG - chr2_4:3605536-3605555 Msa0309160:intron 30.0%
!! TGTCTTATGTCTACTTTTCT+CGG - chr2_4:3605677-3605696 Msa0309160:intron 30.0%
CTAGATTTCATCACTCAAAT+TGG + chr2_4:3605741-3605760 None:intergenic 30.0%
GTTTGATGCAAAAGATACAA+TGG - chr2_4:3605905-3605924 Msa0309160:exon 30.0%
AGCTATATGTAGCACTAATG+TGG + chr2_4:3598322-3598341 None:intergenic 35.0%
CATTAGTGCTACATATAGCT+AGG - chr2_4:3598322-3598341 Msa0309160:three_prime_UTR 35.0%
CCATTATTCTTGGTGAATGA+GGG + chr2_4:3598482-3598501 None:intergenic 35.0%
TCCATTATTCTTGGTGAATG+AGG + chr2_4:3598483-3598502 None:intergenic 35.0%
!!! TTCTGTTTTGAAACACCAAG+TGG + chr2_4:3598639-3598658 None:intergenic 35.0%
! CAGAATTCAGTTTGCTCAAA+AGG - chr2_4:3598654-3598673 Msa0309160:intron 35.0%
! TACCTGTATCTAGAATCCAT+TGG + chr2_4:3598693-3598712 None:intergenic 35.0%
AGGAGTTGGAAAGATTAAGT+TGG + chr2_4:3598726-3598745 None:intergenic 35.0%
! TTTTTAAACTTGTGCCCCAA+AGG - chr2_4:3599069-3599088 Msa0309160:CDS 35.0%
!! TATGTTAACTTGTGCCTTTG+GGG + chr2_4:3599086-3599105 None:intergenic 35.0%
!! GGTCTCTAAATTTGTTACAC+CGG - chr2_4:3599318-3599337 Msa0309160:CDS 35.0%
!! TAAATTTGTTACACCGGTCA+TGG - chr2_4:3599324-3599343 Msa0309160:CDS 35.0%
! AATCTTTTTGTGCAGGTGTT+GGG - chr2_4:3599453-3599472 Msa0309160:intron 35.0%
!! TTTTGGTAGCTTATTCTGCA+TGG - chr2_4:3599491-3599510 Msa0309160:CDS 35.0%
! TTTGGTAGCTTATTCTGCAT+GGG - chr2_4:3599492-3599511 Msa0309160:CDS 35.0%
TGCATGAAAGCAACTTCAAA+GGG + chr2_4:3599523-3599542 None:intergenic 35.0%
! TAGCTTGTAAAGTGTGAAAG+TGG - chr2_4:3600188-3600207 Msa0309160:CDS 35.0%
AGTATAATTGTTGGGGTATG+GGG + chr2_4:3600279-3600298 None:intergenic 35.0%
GAGTATAATTGTTGGGGTAT+GGG + chr2_4:3600280-3600299 None:intergenic 35.0%
! TTTCAATAGTTTGTAGGGGT+AGG + chr2_4:3600302-3600321 None:intergenic 35.0%
TACGCTAGCAGAAATTAGTT+TGG + chr2_4:3600432-3600451 None:intergenic 35.0%
TGTTATGAAGAGATTGGATG+AGG + chr2_4:3600525-3600544 None:intergenic 35.0%
AATCTCAAGGATAAGAGACT+AGG + chr2_4:3600706-3600725 None:intergenic 35.0%
!! TTGCCAATTTTCAAGCATTC+CGG - chr2_4:3600952-3600971 Msa0309160:intron 35.0%
TCCAGAATTTACTTACACAC+CGG + chr2_4:3600974-3600993 None:intergenic 35.0%
! GGAGTAAAGGTATAATTGTC+GGG - chr2_4:3601044-3601063 Msa0309160:intron 35.0%
! GAGTAAAGGTATAATTGTCG+GGG - chr2_4:3601045-3601064 Msa0309160:intron 35.0%
TCTTGGATAGGCTAAACATT+AGG - chr2_4:3601202-3601221 Msa0309160:CDS 35.0%
CTTGGATAGGCTAAACATTA+GGG - chr2_4:3601203-3601222 Msa0309160:CDS 35.0%
ATGTGTTAGACCAACTATTC+AGG - chr2_4:3601258-3601277 Msa0309160:CDS 35.0%
TTTAACCACGAGACTAGATA+TGG - chr2_4:3601425-3601444 Msa0309160:intron 35.0%
TTAACCACGAGACTAGATAT+GGG - chr2_4:3601426-3601445 Msa0309160:intron 35.0%
!! GTGTTCAGAAATTTTGATCC+TGG + chr2_4:3601452-3601471 None:intergenic 35.0%
TTAGGGGGCCTAAAAAATAT+TGG + chr2_4:3601501-3601520 None:intergenic 35.0%
GGGTACTAGAAAGTAAAATC+GGG - chr2_4:3601657-3601676 Msa0309160:CDS 35.0%
! TCCAGCAATTTAAAGCAATC+AGG - chr2_4:3601702-3601721 Msa0309160:CDS 35.0%
! TCCTGATTGCTTTAAATTGC+TGG + chr2_4:3601706-3601725 None:intergenic 35.0%
TTCATAGAGCAACTAACATG+AGG - chr2_4:3602031-3602050 Msa0309160:intron 35.0%
GATGGAAGCTATGACATTTA+TGG + chr2_4:3602062-3602081 None:intergenic 35.0%
!!! GTGCAACAACTATTTTTGGA+TGG + chr2_4:3602080-3602099 None:intergenic 35.0%
! ATGGGTGCAACAACTATTTT+TGG + chr2_4:3602084-3602103 None:intergenic 35.0%
AACATAGAAGAAGCCTTACA+TGG - chr2_4:3602201-3602220 Msa0309160:intron 35.0%
!! TGACTTGACATTGGTGTTAT+TGG + chr2_4:3602387-3602406 None:intergenic 35.0%
! TCAATGACTTGACTTGACAT+TGG + chr2_4:3602396-3602415 None:intergenic 35.0%
GTTGTTAGTAATGTTGAGAC+AGG - chr2_4:3602594-3602613 Msa0309160:intron 35.0%
AAGTAGCCTATTGCTTCATA+TGG + chr2_4:3602662-3602681 None:intergenic 35.0%
!!! GCAATAGGCTACTTTTTAAC+TGG - chr2_4:3602668-3602687 Msa0309160:intron 35.0%
AAAATCTGAGCATTCCTAAG+AGG + chr2_4:3602721-3602740 None:intergenic 35.0%
! TCTTAGGAATGCTCAGATTT+TGG - chr2_4:3602720-3602739 Msa0309160:intron 35.0%
!! CTAAATGCTTAGCTTTGACT+AGG - chr2_4:3602943-3602962 Msa0309160:intron 35.0%
! CTATTTTCAGTTCATTGTGC+TGG - chr2_4:3603021-3603040 Msa0309160:intron 35.0%
TATCAGCTAGCATGTAATAG+AGG + chr2_4:3603050-3603069 None:intergenic 35.0%
CCGAAATATATCTAATCCGA+GGG + chr2_4:3603134-3603153 None:intergenic 35.0%
! CCCTCGGATTAGATATATTT+CGG - chr2_4:3603131-3603150 Msa0309160:intron 35.0%
TACCAATCAAGTAAGCAGTT+AGG + chr2_4:3603266-3603285 None:intergenic 35.0%
TGTCATGAATTTCTTGTGAC+AGG + chr2_4:3603394-3603413 None:intergenic 35.0%
! CAAATTTTGTGTGCCGAAAT+CGG - chr2_4:3603470-3603489 Msa0309160:intron 35.0%
CTACCAAAGTCAATTTGCAA+AGG - chr2_4:3603583-3603602 Msa0309160:intron 35.0%
! ATGCCTTTGCAAATTGACTT+TGG + chr2_4:3603589-3603608 None:intergenic 35.0%
CAGTTGGAAAAAACAAATGC+TGG + chr2_4:3603615-3603634 None:intergenic 35.0%
AGATAGACTTTCTCTACAGT+TGG + chr2_4:3603631-3603650 None:intergenic 35.0%
GAGAAAGTCTATCTCTTCAA+AGG - chr2_4:3603637-3603656 Msa0309160:intron 35.0%
AATCTCTTACTAGGGACAAA+AGG + chr2_4:3603678-3603697 None:intergenic 35.0%
CGTCTATTTACGACAGAATA+TGG + chr2_4:3603852-3603871 None:intergenic 35.0%
GACGTATGTATTTATGCCAA+TGG - chr2_4:3603868-3603887 Msa0309160:intron 35.0%
CGTTCACTAAATTGTGAATG+TGG - chr2_4:3603916-3603935 Msa0309160:intron 35.0%
GTTGTAGGTTGCAAAAATGA+AGG - chr2_4:3603938-3603957 Msa0309160:intron 35.0%
ATGATTACATCCTCTTTAGG+TGG + chr2_4:3603975-3603994 None:intergenic 35.0%
TGCATGATTACATCCTCTTT+AGG + chr2_4:3603978-3603997 None:intergenic 35.0%
!!! TATTTTAGTGTCAGGAGAAG+TGG - chr2_4:3604022-3604041 Msa0309160:intron 35.0%
! ATTTTAGGCACTCTAACAAC+TGG - chr2_4:3604077-3604096 Msa0309160:intron 35.0%
GTTCTGTATGTAAAACTCTG+AGG + chr2_4:3604140-3604159 None:intergenic 35.0%
CATTGCTTCTATAAGATCAC+TGG + chr2_4:3604195-3604214 None:intergenic 35.0%
CTCAAAAATTTCCTTCAGGT+TGG - chr2_4:3604245-3604264 Msa0309160:intron 35.0%
! TTTAATGGTGGAAAATGTGG+AGG - chr2_4:3604388-3604407 Msa0309160:intron 35.0%
AACAAATTCACAGCCATGTT+AGG + chr2_4:3604422-3604441 None:intergenic 35.0%
ATTAGACATGAGCATACCAA+TGG + chr2_4:3604536-3604555 None:intergenic 35.0%
CGACTTGACATTGATATATG+TGG - chr2_4:3604666-3604685 Msa0309160:intron 35.0%
! TTCTTTTTGCTGCTGTACAT+AGG + chr2_4:3605141-3605160 None:intergenic 35.0%
! ATTGACTCAAAAGATCGACA+TGG - chr2_4:3605205-3605224 Msa0309160:intron 35.0%
! GATTTTCTGCCATAGCAATT+TGG + chr2_4:3605243-3605262 None:intergenic 35.0%
TAATACATACTCACTAGGCA+TGG + chr2_4:3605401-3605420 None:intergenic 35.0%
GCCTAGTGAGTATGTATTAA+AGG - chr2_4:3605402-3605421 Msa0309160:intron 35.0%
AAGAAGAACAGAAGCAGATT+TGG - chr2_4:3605434-3605453 Msa0309160:intron 35.0%
AGAAGAACAGAAGCAGATTT+GGG - chr2_4:3605435-3605454 Msa0309160:intron 35.0%
CAGATTTGGGGAAGATATAA+TGG - chr2_4:3605448-3605467 Msa0309160:intron 35.0%
CCTCTATATATGCTTACTCT+TGG + chr2_4:3605484-3605503 None:intergenic 35.0%
CCAAGAGTAAGCATATATAG+AGG - chr2_4:3605481-3605500 Msa0309160:intron 35.0%
TTGAGCTTCTCTAATGAATC+AGG + chr2_4:3605565-3605584 None:intergenic 35.0%
GAGAAGCTCAAAATTATTGC+AGG - chr2_4:3605574-3605593 Msa0309160:intron 35.0%
TGTAATTACTAGCGTGTAGA+TGG - chr2_4:3605647-3605666 Msa0309160:intron 35.0%
ACAATGGTGACAAATGAAGA+AGG - chr2_4:3605921-3605940 Msa0309160:five_prime_UTR 35.0%
! TTTCTTTTGTCACAAGGAAG+TGG - chr2_4:3606102-3606121 Msa0309160:five_prime_UTR 35.0%
TTCTTGGTGAATGAGGGAAA+TGG + chr2_4:3598476-3598495 None:intergenic 40.0%
CCCTCATTCACCAAGAATAA+TGG - chr2_4:3598479-3598498 Msa0309160:CDS 40.0%
ATGCTAGAGTCTAAGTCATG+AGG + chr2_4:3598528-3598547 None:intergenic 40.0%
!!! TGTTTTGAAACACCAAGTGG+TGG + chr2_4:3598636-3598655 None:intergenic 40.0%
! ATTCAGTTTGCTCAAAAGGC+TGG - chr2_4:3598658-3598677 Msa0309160:intron 40.0%
! CACCAATGGATTCTAGATAC+AGG - chr2_4:3598688-3598707 Msa0309160:intron 40.0%
!! AGTGTACTTTTTGCCATGAC+CGG + chr2_4:3599340-3599359 None:intergenic 40.0%
! CAATCTTTTTGTGCAGGTGT+TGG - chr2_4:3599452-3599471 Msa0309160:intron 40.0%
GTGCATGAAAGCAACTTCAA+AGG + chr2_4:3599524-3599543 None:intergenic 40.0%
TCATGCACTCTTCTCCAAAT+AGG - chr2_4:3599536-3599555 Msa0309160:intron 40.0%
GGAGTATAATTGTTGGGGTA+TGG + chr2_4:3600281-3600300 None:intergenic 40.0%
! GGGTAGGAGTATAATTGTTG+GGG + chr2_4:3600286-3600305 None:intergenic 40.0%
! GGGGTAGGAGTATAATTGTT+GGG + chr2_4:3600287-3600306 None:intergenic 40.0%
! AGGGGTAGGAGTATAATTGT+TGG + chr2_4:3600288-3600307 None:intergenic 40.0%
! TTTCTGGAAAAGTGGAGTGA+GGG + chr2_4:3600366-3600385 None:intergenic 40.0%
! GAGAAACGTTTCTGGAAAAG+TGG + chr2_4:3600374-3600393 None:intergenic 40.0%
GTAAGGATAGCAAGAAGATG+AGG + chr2_4:3600401-3600420 None:intergenic 40.0%
ACACCGGAATGCTTGAAAAT+TGG + chr2_4:3600958-3600977 None:intergenic 40.0%
TCCGGTGTGTAAGTAAATTC+TGG - chr2_4:3600970-3600989 Msa0309160:intron 40.0%
! TTTTCTCTAACTCATGCGTG+AGG - chr2_4:3601136-3601155 Msa0309160:CDS 40.0%
TTTCTCTAACTCATGCGTGA+GGG - chr2_4:3601137-3601156 Msa0309160:CDS 40.0%
GGGGCCTAAAAAATATTGGA+GGG + chr2_4:3601497-3601516 None:intergenic 40.0%
CTGGACCCTATCATTGAAAT+GGG + chr2_4:3601687-3601706 None:intergenic 40.0%
AGAAGAGTAAGCAAAACTGG+TGG + chr2_4:3601742-3601761 None:intergenic 40.0%
TCAACGCACAGTTAAAGTGT+CGG + chr2_4:3602492-3602511 None:intergenic 40.0%
CTTGTCAACATGGTTCCTAA+TGG - chr2_4:3602619-3602638 Msa0309160:intron 40.0%
! AACATGGTTCCTAATGGATG+TGG - chr2_4:3602625-3602644 Msa0309160:intron 40.0%
! TAGTTGATGCCACATCCATT+AGG + chr2_4:3602637-3602656 None:intergenic 40.0%
AGTCTACCTTACTACCTCTT+AGG - chr2_4:3602704-3602723 Msa0309160:intron 40.0%
AGCATTCCTAAGAGGTAGTA+AGG + chr2_4:3602713-3602732 None:intergenic 40.0%
GTGTCAAGCAATTCTTCACA+AGG - chr2_4:3602753-3602772 Msa0309160:intron 40.0%
! ACATCAGGTTCAGCTATTTC+TGG - chr2_4:3602869-3602888 Msa0309160:intron 40.0%
!! CATCAGGTTCAGCTATTTCT+GGG - chr2_4:3602870-3602889 Msa0309160:intron 40.0%
GTGACATACAGAAAGAAGTC+TGG + chr2_4:3602905-3602924 None:intergenic 40.0%
TCCATGTCTTTCCTTCATGA+GGG + chr2_4:3603077-3603096 None:intergenic 40.0%
ATCCATGTCTTTCCTTCATG+AGG + chr2_4:3603078-3603097 None:intergenic 40.0%
CATGAAGGAAAGACATGGAT+TGG - chr2_4:3603078-3603097 Msa0309160:intron 40.0%
GCCGAAATATATCTAATCCG+AGG + chr2_4:3603135-3603154 None:intergenic 40.0%
TTCTACATGCTCTTCAACCT+TGG - chr2_4:3603240-3603259 Msa0309160:intron 40.0%
! ATCTGCTCTTTTAACCTTGG+AGG + chr2_4:3603499-3603518 None:intergenic 40.0%
! AGGATCTGCTCTTTTAACCT+TGG + chr2_4:3603502-3603521 None:intergenic 40.0%
AAGGTTAAAAGAGCAGATCC+TGG - chr2_4:3603501-3603520 Msa0309160:intron 40.0%
ATCTCAAACACATGTAAGCC+AGG + chr2_4:3603522-3603541 None:intergenic 40.0%
AGCTTATACGCAAGCGTTAT+TGG + chr2_4:3603730-3603749 None:intergenic 40.0%
AGAGTACATACCACCTAAAG+AGG - chr2_4:3603962-3603981 Msa0309160:intron 40.0%
CTAACAACTGGAGACATGTT+TGG - chr2_4:3604089-3604108 Msa0309160:intron 40.0%
!! AAGTTGGTGCACTTTGTTGT+AGG - chr2_4:3604114-3604133 Msa0309160:intron 40.0%
!! GGCTGTGAATTTGTTAACTG+TGG - chr2_4:3604427-3604446 Msa0309160:intron 40.0%
!! TCTTTTGAGTCTCCAATGTC+AGG + chr2_4:3604506-3604525 None:intergenic 40.0%
GTCAGCAGTGATATACATGA+AGG + chr2_4:3604585-3604604 None:intergenic 40.0%
TATCAATGTCAAGTCGGTGT+TGG + chr2_4:3604662-3604681 None:intergenic 40.0%
AGCACATAGCTGCATCAAAT+GGG - chr2_4:3604867-3604886 Msa0309160:CDS 40.0%
TGAATGGTGACAATGCACTA+TGG - chr2_4:3605029-3605048 Msa0309160:intron 40.0%
AAAGAGCAGATAGCTGATAG+AGG + chr2_4:3605093-3605112 None:intergenic 40.0%
GACAGCTATCCAAATTGCTA+TGG - chr2_4:3605231-3605250 Msa0309160:intron 40.0%
TGCTATGGCAGAAAATCATG+TGG - chr2_4:3605246-3605265 Msa0309160:intron 40.0%
GTTCAGTTGCTTGTCATGAA+CGG - chr2_4:3605274-3605293 Msa0309160:intron 40.0%
ATTCTGCAGAAACGCGAAAT+CGG - chr2_4:3605352-3605371 Msa0309160:intron 40.0%
GAAGAACAGAAGCAGATTTG+GGG - chr2_4:3605436-3605455 Msa0309160:intron 40.0%
CTCTTTCTCTTCTCACTACT+GGG + chr2_4:3605510-3605529 None:intergenic 40.0%
GAAAGAGGTTTCATTGAAGC+TGG - chr2_4:3605523-3605542 Msa0309160:intron 40.0%
GAAAGGGTAAGCTCAACACA+AGG + chr2_4:3598380-3598399 None:intergenic 45.0%
AAGCTCATTCTTCCACCACT+TGG - chr2_4:3598621-3598640 Msa0309160:intron 45.0%
AGGCTGGATCATATCACCAA+TGG - chr2_4:3598674-3598693 Msa0309160:intron 45.0%
!!! CAGGTGTTGGGAGAGTTTTA+TGG - chr2_4:3599465-3599484 Msa0309160:CDS 45.0%
TTCTTCGTCGCATACGTAGA+TGG - chr2_4:3599619-3599638 Msa0309160:intron 45.0%
! TTCTGGAAAAGTGGAGTGAG+GGG + chr2_4:3600365-3600384 None:intergenic 45.0%
! GTTTCTGGAAAAGTGGAGTG+AGG + chr2_4:3600367-3600386 None:intergenic 45.0%
GAGGAAGAGAGAAACGTTTC+TGG + chr2_4:3600382-3600401 None:intergenic 45.0%
!! CAGTCCTTGATTTGTTGCCA+CGG - chr2_4:3600640-3600659 Msa0309160:intron 45.0%
!! AGTCCTTGATTTGTTGCCAC+GGG - chr2_4:3600641-3600660 Msa0309160:intron 45.0%
!! TTCAATTGATTGGTCTCCCG+TGG + chr2_4:3600660-3600679 None:intergenic 45.0%
GGTATAATTGTCGGGGTATG+AGG - chr2_4:3601052-3601071 Msa0309160:intron 45.0%
CTCGTGGTTAAACATAGACC+AGG + chr2_4:3601417-3601436 None:intergenic 45.0%
GGGGGCCTAAAAAATATTGG+AGG + chr2_4:3601498-3601517 None:intergenic 45.0%
GCCAGCCCATTTCAATGATA+GGG - chr2_4:3601679-3601698 Msa0309160:CDS 45.0%
ACCCTATCATTGAAATGGGC+TGG + chr2_4:3601683-3601702 None:intergenic 45.0%
GCTGGACCCTATCATTGAAA+TGG + chr2_4:3601688-3601707 None:intergenic 45.0%
! CAACGCACAGTTAAAGTGTC+GGG + chr2_4:3602491-3602510 None:intergenic 45.0%
GAGACAGGTACTTGTCAACA+TGG - chr2_4:3602609-3602628 Msa0309160:intron 45.0%
GCTGATATGTACCCTCATGA+AGG - chr2_4:3603063-3603082 Msa0309160:intron 45.0%
ACCCTCATGAAGGAAAGACA+TGG - chr2_4:3603073-3603092 Msa0309160:intron 45.0%
TCTTCATGCTGTCAACACCA+TGG - chr2_4:3603200-3603219 Msa0309160:intron 45.0%
TCAAGTAAGCAGTTAGGCCA+AGG + chr2_4:3603260-3603279 None:intergenic 45.0%
GGCCTAACTGCTTACTTGAT+TGG - chr2_4:3603261-3603280 Msa0309160:intron 45.0%
GGAGACATGTTTGGAGAAGT+TGG - chr2_4:3604098-3604117 Msa0309160:intron 45.0%
CAGAAGCTGTGTTAGAGTCT+TGG + chr2_4:3604162-3604181 None:intergenic 45.0%
CAAGACAGTAACCAACCTGA+AGG + chr2_4:3604259-3604278 None:intergenic 45.0%
GCAGCATTTCAAGCAGCTTA+AGG - chr2_4:3604349-3604368 Msa0309160:intron 45.0%
TTTGTTAACTGTGGCCAGCA+CGG - chr2_4:3604436-3604455 Msa0309160:intron 45.0%
CTGCTGACATATCAGATCGA+CGG - chr2_4:3604597-3604616 Msa0309160:intron 45.0%
TATCAGATCGACGGTGTGTT+CGG - chr2_4:3604606-3604625 Msa0309160:intron 45.0%
!! TCTACGCTTAGTCTTGTGTC+CGG - chr2_4:3604730-3604749 Msa0309160:CDS 45.0%
CAGCACATAGCTGCATCAAA+TGG - chr2_4:3604866-3604885 Msa0309160:CDS 45.0%
CTTTCTGATCCATACACAGC+AGG - chr2_4:3605109-3605128 Msa0309160:intron 45.0%
GGCAGAAAATCATGTGGACA+TGG - chr2_4:3605252-3605271 Msa0309160:intron 45.0%
CCTCTTTCTCTTCTCACTAC+TGG + chr2_4:3605511-3605530 None:intergenic 45.0%
CCAGTAGTGAGAAGAGAAAG+AGG - chr2_4:3605508-3605527 Msa0309160:intron 45.0%
!! ATCTATTTATAATTATAATT+AGG + chr2_4:3601381-3601400 None:intergenic 5.0%
!!! AATTAAATAATATGTATTTT+TGG + chr2_4:3602261-3602280 None:intergenic 5.0%
TCTGGAAAAGTGGAGTGAGG+GGG + chr2_4:3600364-3600383 None:intergenic 50.0%
TCTCCCGTGGCAACAAATCA+AGG + chr2_4:3600647-3600666 None:intergenic 50.0%
GGCCAGCCCATTTCAATGAT+AGG - chr2_4:3601678-3601697 Msa0309160:CDS 50.0%
TGTCTTTCTCAAGCCTGCCA+AGG + chr2_4:3602852-3602871 None:intergenic 50.0%
GCAGGCTTGAGAAAGACATC+AGG - chr2_4:3602854-3602873 Msa0309160:intron 50.0%
!! GGGCTTGTCTCTCTGAAGTT+TGG + chr2_4:3603114-3603133 None:intergenic 50.0%
ACTTCAGAGAGACAAGCCCT+CGG - chr2_4:3603115-3603134 Msa0309160:intron 50.0%
! ACCTTGGAGGCAACCGATTT+CGG + chr2_4:3603486-3603505 None:intergenic 50.0%
GGAGGAAGACGATCCTAACA+TGG - chr2_4:3604406-3604425 Msa0309160:intron 50.0%
TTGTTAACTGTGGCCAGCAC+GGG - chr2_4:3604437-3604456 Msa0309160:intron 50.0%
! GGAGCTTCTAAGAGCTGGTT+TGG - chr2_4:3604478-3604497 Msa0309160:intron 50.0%
!! GCTGGTTTGGATCCTGACAT+TGG - chr2_4:3604491-3604510 Msa0309160:intron 50.0%
! TCGGTGTCCTACACATGTGA+CGG - chr2_4:3604625-3604644 Msa0309160:intron 50.0%
TCACACACCGTCACATGTGT+AGG + chr2_4:3604635-3604654 None:intergenic 50.0%
CTTGTGTCCGGTGTTTGTGT+CGG - chr2_4:3604742-3604761 Msa0309160:CDS 50.0%
AGGAGATTGCCTGCTGTGTA+TGG + chr2_4:3605121-3605140 None:intergenic 50.0%
CTGGCCCATATCTAGTCTCG+TGG + chr2_4:3601433-3601452 None:intergenic 55.0%
CACGAGACTAGATATGGGCC+AGG - chr2_4:3601431-3601450 Msa0309160:intron 55.0%
TGAAGGAACTCGTCGCACCA+TGG - chr2_4:3603305-3603324 Msa0309160:intron 55.0%
AAAAGCAGCATTGCCCGTGC+TGG + chr2_4:3604453-3604472 None:intergenic 55.0%
!!! GGGCAATGCTGCTTTTCTCG+AGG - chr2_4:3604457-3604476 Msa0309160:intron 55.0%
! CTCGAGGAGCTTCTAAGAGC+TGG - chr2_4:3604473-3604492 Msa0309160:intron 55.0%
ACTGCCACCGACACAAACAC+CGG + chr2_4:3604752-3604771 None:intergenic 55.0%
AGTGGAGTGAGGGGGTGAGT+GGG + chr2_4:3600356-3600375 None:intergenic 60.0%
AAGTGGAGTGAGGGGGTGAG+TGG + chr2_4:3600357-3600376 None:intergenic 60.0%
GCCGAAATCGGTTGCCTCCA+AGG - chr2_4:3603482-3603501 Msa0309160:intron 60.0%
GTGTCCGGTGTTTGTGTCGG+TGG - chr2_4:3604745-3604764 Msa0309160:CDS 60.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 3598177 3606230 3598177 ID=Msa0309160;Name=Msa0309160
chr2_4 mRNA 3598177 3606230 3598177 ID=Msa0309160-mRNA-1;Parent=Msa0309160;Name=Msa0309160-mRNA-1;_AED=0.07;_eAED=0.07;_QI=321|1|1|1|1|1|11|211|827
chr2_4 exon 3598177 3598515 3598177 ID=Msa0309160-mRNA-1:exon:1178;Parent=Msa0309160-mRNA-1
chr2_4 exon 3598812 3599381 3598812 ID=Msa0309160-mRNA-1:exon:1177;Parent=Msa0309160-mRNA-1
chr2_4 exon 3599463 3599538 3599463 ID=Msa0309160-mRNA-1:exon:1176;Parent=Msa0309160-mRNA-1
chr2_4 exon 3599869 3600054 3599869 ID=Msa0309160-mRNA-1:exon:1175;Parent=Msa0309160-mRNA-1
chr2_4 exon 3600145 3600462 3600145 ID=Msa0309160-mRNA-1:exon:1174;Parent=Msa0309160-mRNA-1
chr2_4 exon 3600720 3600959 3600720 ID=Msa0309160-mRNA-1:exon:1173;Parent=Msa0309160-mRNA-1
chr2_4 exon 3601075 3601392 3601075 ID=Msa0309160-mRNA-1:exon:1172;Parent=Msa0309160-mRNA-1
chr2_4 exon 3601492 3601549 3601492 ID=Msa0309160-mRNA-1:exon:1171;Parent=Msa0309160-mRNA-1
chr2_4 exon 3601633 3601791 3601633 ID=Msa0309160-mRNA-1:exon:1170;Parent=Msa0309160-mRNA-1
chr2_4 exon 3604721 3604939 3604721 ID=Msa0309160-mRNA-1:exon:1169;Parent=Msa0309160-mRNA-1
chr2_4 exon 3605698 3606230 3605698 ID=Msa0309160-mRNA-1:exon:1168;Parent=Msa0309160-mRNA-1
chr2_4 five_prime_UTR 3605910 3606230 3605910 ID=Msa0309160-mRNA-1:five_prime_utr;Parent=Msa0309160-mRNA-1
chr2_4 CDS 3605698 3605909 3605698 ID=Msa0309160-mRNA-1:cds;Parent=Msa0309160-mRNA-1
chr2_4 CDS 3604721 3604939 3604721 ID=Msa0309160-mRNA-1:cds;Parent=Msa0309160-mRNA-1
chr2_4 CDS 3601633 3601791 3601633 ID=Msa0309160-mRNA-1:cds;Parent=Msa0309160-mRNA-1
chr2_4 CDS 3601492 3601549 3601492 ID=Msa0309160-mRNA-1:cds;Parent=Msa0309160-mRNA-1
chr2_4 CDS 3601075 3601392 3601075 ID=Msa0309160-mRNA-1:cds;Parent=Msa0309160-mRNA-1
chr2_4 CDS 3600720 3600959 3600720 ID=Msa0309160-mRNA-1:cds;Parent=Msa0309160-mRNA-1
chr2_4 CDS 3600145 3600462 3600145 ID=Msa0309160-mRNA-1:cds;Parent=Msa0309160-mRNA-1
chr2_4 CDS 3599869 3600054 3599869 ID=Msa0309160-mRNA-1:cds;Parent=Msa0309160-mRNA-1
chr2_4 CDS 3599463 3599538 3599463 ID=Msa0309160-mRNA-1:cds;Parent=Msa0309160-mRNA-1
chr2_4 CDS 3598812 3599381 3598812 ID=Msa0309160-mRNA-1:cds;Parent=Msa0309160-mRNA-1
chr2_4 CDS 3598388 3598515 3598388 ID=Msa0309160-mRNA-1:cds;Parent=Msa0309160-mRNA-1
chr2_4 three_prime_UTR 3598177 3598387 3598177 ID=Msa0309160-mRNA-1:three_prime_utr;Parent=Msa0309160-mRNA-1
Gene Sequence

>Msa0309160

ATGGAGAGCAATTTCAGTTCATATAATCCTCATGACTTAGACTCTAGCATGAAGAGAAAGCACCATGATGTTAAAGAAGATTATTATACATCATCTTCATCTTTCAATCTAAGGAATGTTTCAAAGCTCATTCTTCCACCACTTGGTGTTTCAAAACAGAATTCAGTTTGCTCAAAAGGCTGGATCATATCACCAATGGATTCTAGATACAGGTGTTGGGAGAGTTTTATGGTTATTTTGGTAGCTTATTCTGCATGGGTTTATCCCTTTGAAGTTGCTTTCATGCACTCTTCTCCAAATAGGAAACTATATATTGTGGACAATATTGTTGATCTTTTCTTCGCTGTTGATATTGTTTTGACATTCTTCGTCGCATACGTAGATGGAACAACTCATCTACTTGTCAGAGATTCCAAAAAAATTGCTGTCAGGTACTTGTCAACATGGTTCCTAATGGATGTGGCATCAACTATACCATATGAAGCAATAGGCTACTTTTTAACTGGCAAGCACAAATTGAGTCTACCTTACTACCTCTTAGGAATGCTCAGATTTTGGAGAATTAGACGTGTCAAGCAATTCTTCACAAGGCTTGAGAAAGACATCAGGTTCAGCTATTTCTGGGTCAGATGTGCCAGACTTCTTTCTGTAACACTATTTTCAGTTCATTGTGCTGGGTGCCTCTATTACATGCTAGCTGATATGTACCCTCATGAAGGAAAGACATGGATTGGAGCTGTGATTCCAAACTTCAGAGAGACAAGCCCTCGGATTAGATATATTTCGGCTATTTATTGGTCCATCACTACCATGACAACTGTTGGTTATGGTGATCTTCATGCTGTCAACACCATGGAAATGATTTTCATTATTTTCTACATGCTCTTCAACCTTGGCCTAACTGCTTACTTGATTGGTAACATGACAAATCTTGTTGTTGAAGGAACTCGTCGCACCATGGAATTTAGAAACAGCATTGAAGCAGCATCAAATTTTGTGTGCCGAAATCGGTTGCCTCCAAGGTTAAAAGAGCAGATCCTGGCTTACATGTGTTTGAGATTTAAGGCAGAGAGCTTGAATCAGCATCAGCTAATTGAACAGCTACCAAAGTCAATTTGCAAAGGCATTTGCCAGCATTTGTTTTTTCCAACTGTAGAGAAAGTCTATCTCTTCAAAGGCGTCTCAAAAGAAATCCTTTTGTCCCTAGTTGCAAAAATGAAGGCAGAGTACATACCACCTAAAGAGGATGTAATCATGCAAAATGAATCACCAGATGATGTTTATATTTTAGTGTCAGGAGAAGTGGAGATTATTGATAGTGTTATAGAGAAAGAGAGAATTTTAGGCACTCTAACAACTGGAGACATGTTTGGAGAAGTTGGTGCACTTTGTTGTAGGCCTCAGAGTTTTACATACAGAACCAAGACTCTAACACAGCTTCTGAAGCTGAAAACCAGTGATCTTATAGAAGCAATGCAGATTAAAAAAGAAGACAATATACTAATACTCAAAAATTTCCTTCAGCATTTCAAGCAGCTTAAGGATTTGAGTATCAAAGATTTAATGGTGGAAAATGTGGAGGAAGACGATCCTAACATGGCTGTGAATTTGTTAACTGTGGCCAGCACGGGCAATGCTGCTTTTCTCGAGGAGCTTCTAAGAGCTGGTTTGGATCCTGACATTGGAGACTCAAAAGAAAAAACTCCATTGCACATAGCTGCATCAAATGGGCATGAAGAGTGTGTTAAAGTCTTGCTTAAGCATACATGCAACATACATATAAAAGATATGAATGGTGACAATGCACTATGGTATGCTATAGCATCAAAACATCACTCAATATTCAGGATCCTCTATCAGCTATCTGCTCTTTCTGATCCATACACAGCAGGCAATCTCCTATGTACAGCAGCAAAAAGAAATGATATAACAGTGATGCATGAACTTTTAAAGCAAGGATTAAACATTGACTCAAAAGATCGACATGGCATGACAGCTATCCAAATTGCTATGGCAGAAAATCATGTGGACATGGTTCAGTTGCTTGTCATGAACGGCGCAGATGTTACTGATGTACATGTTCATGAATTTTCTGCATCCATCTTAAATGAAATTCTGCAGAAACGCGAAATCGGACATCTAATTAATGTGAGTGAGGCCATGCCTAGTGAGTATGTATTAAAGGTGCAAAGTCAAGAAGAACAGAAGCAGATTTGGGGAAGATATAATGGACTAGATTGTCCAAGAGTAAGCATATATAGAGGTCACCCAGTAGTGAGAAGAGAAAGAGGTTTCATTGAAGCTGGAAAGTTAATAAGGTTGCCTGATTCATTAGAGAAGCTCAAAATTATTGCAGGTGAAAAATTTGGGTTTGATGCAAAAGATACAATGGTGACAAATGAAGAAGGAGCAGAAATAGATTGTATTGATGTGATCAGAGATAATGACAAACTTTTTTTTGTTGAAGAGGCTATTGATGCATAA

Protein sequence

>Msa0309160

MESNFSSYNPHDLDSSMKRKHHDVKEDYYTSSSSFNLRNVSKLILPPLGVSKQNSVCSKGWIISPMDSRYRCWESFMVILVAYSAWVYPFEVAFMHSSPNRKLYIVDNIVDLFFAVDIVLTFFVAYVDGTTHLLVRDSKKIAVRYLSTWFLMDVASTIPYEAIGYFLTGKHKLSLPYYLLGMLRFWRIRRVKQFFTRLEKDIRFSYFWVRCARLLSVTLFSVHCAGCLYYMLADMYPHEGKTWIGAVIPNFRETSPRIRYISAIYWSITTMTTVGYGDLHAVNTMEMIFIIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIEAASNFVCRNRLPPRLKEQILAYMCLRFKAESLNQHQLIEQLPKSICKGICQHLFFPTVEKVYLFKGVSKEILLSLVAKMKAEYIPPKEDVIMQNESPDDVYILVSGEVEIIDSVIEKERILGTLTTGDMFGEVGALCCRPQSFTYRTKTLTQLLKLKTSDLIEAMQIKKEDNILILKNFLQHFKQLKDLSIKDLMVENVEEDDPNMAVNLLTVASTGNAAFLEELLRAGLDPDIGDSKEKTPLHIAASNGHEECVKVLLKHTCNIHIKDMNGDNALWYAIASKHHSIFRILYQLSALSDPYTAGNLLCTAAKRNDITVMHELLKQGLNIDSKDRHGMTAIQIAMAENHVDMVQLLVMNGADVTDVHVHEFSASILNEILQKREIGHLINVSEAMPSEYVLKVQSQEEQKQIWGRYNGLDCPRVSIYRGHPVVRRERGFIEAGKLIRLPDSLEKLKIIAGEKFGFDAKDTMVTNEEGAEIDCIDVIRDNDKLFFVEEAIDA*