AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0231310

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0231310 MtrunA17_Chr2g0277651 96.506 830 26 2 1 827 1 830 0.0 1666
Msa0231310 MtrunA17_Chr4g0063141 47.853 652 330 5 44 689 28 675 0.0 631
Msa0231310 MtrunA17_Chr8g0356081 48.880 491 240 3 44 525 22 510 2.13e-167 501
Msa0231310 MtrunA17_Chr1g0148981 38.163 773 368 14 16 689 8 769 3.56e-163 500
Msa0231310 MtrunA17_Chr3g0138671 45.347 505 267 5 36 532 17 520 1.64e-145 442
Msa0231310 MtrunA17_Chr2g0286031 53.867 375 162 2 145 519 17 380 8.18e-140 429
Msa0231310 MtrunA17_Chr3g0138131 50.253 396 181 6 45 433 46 432 1.32e-131 401
Msa0231310 MtrunA17_Chr5g0434371 31.074 782 493 15 61 824 81 834 2.11e-117 375
Msa0231310 MtrunA17_Chr3g0138141 29.664 327 211 4 446 767 11 323 1.56e-38 149
Msa0231310 MtrunA17_Chr4g0063071 31.034 232 151 3 286 508 5 236 1.90e-27 112
Msa0231310 MtrunA17_Chr4g0062561 29.670 273 178 5 92 363 1 260 5.16e-27 118
Msa0231310 MtrunA17_Chr2g0286041 50.476 105 51 1 40 144 29 132 1.05e-26 105
Msa0231310 MtrunA17_Chr4g0062571 32.456 228 138 6 92 318 1 213 7.71e-25 103
Msa0231310 MtrunA17_Chr8g0347121 24.762 315 199 8 166 459 242 539 4.11e-16 82.8
Msa0231310 MtrunA17_Chr5g0405531 69.811 53 13 1 256 305 14 66 5.12e-16 77.4
Msa0231310 MtrunA17_Chr3g0126541 20.704 483 302 14 105 514 135 609 7.90e-16 82.0
Msa0231310 MtrunA17_Chr1g0158861 20.148 541 340 15 58 514 79 611 1.13e-15 81.6
Msa0231310 MtrunA17_Chr1g0181121 20.206 485 307 12 103 514 95 572 1.24e-15 81.3
Msa0231310 MtrunA17_Chr4g0001481 24.286 210 154 3 253 459 375 582 2.13e-15 80.5
Msa0231310 MtrunA17_Chr4g0063081 28.788 198 126 6 74 264 3 192 1.66e-14 73.2
Msa0231310 MtrunA17_Chr4g0073941 24.044 183 138 1 259 440 374 556 1.37e-12 71.6
Msa0231310 MtrunA17_Chr6g0461061 27.442 215 109 6 509 689 255 456 2.12e-12 70.5
Msa0231310 MtrunA17_Chr1g0196261 28.947 152 98 1 541 692 261 402 2.43e-12 70.1
Msa0231310 MtrunA17_Chr4g0009161 41.975 81 46 1 445 525 14 93 1.10e-11 65.5
Msa0231310 MtrunA17_Chr7g0274241 31.447 159 102 3 530 682 114 271 1.35e-11 67.8
Msa0231310 MtrunA17_Chr4g0028861 22.348 264 193 6 259 515 395 653 4.06e-11 66.6
Msa0231310 MtrunA17_Chr2g0326871 23.574 263 189 6 259 514 348 605 4.09e-11 66.6
Msa0231310 MtrunA17_Chr3g0125651 20.992 262 197 5 259 514 314 571 4.98e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0231310 AT4G22200.1 68.485 825 215 8 12 825 11 801 0.0 1130
Msa0231310 AT4G22200.2 73.905 571 134 6 12 570 11 578 0.0 859
Msa0231310 AT2G26650.1 41.327 859 435 12 22 824 12 857 0.0 660
Msa0231310 AT4G32500.1 39.863 873 457 12 10 822 14 878 0.0 624
Msa0231310 AT2G25600.1 45.401 674 349 7 27 689 35 700 0.0 602
Msa0231310 AT2G26650.2 40.867 761 385 10 120 824 1 752 0.0 577
Msa0231310 AT5G46240.1 47.628 548 275 4 40 587 29 564 5.96e-178 528
Msa0231310 AT4G18290.1 52.391 481 227 2 40 520 29 507 5.67e-174 518
Msa0231310 AT4G18290.2 52.391 481 227 2 40 520 40 518 1.37e-173 518
Msa0231310 AT4G32650.1 46.998 483 252 4 36 515 51 532 3.43e-137 422
Msa0231310 AT4G32650.3 46.998 483 252 4 36 515 51 532 4.88e-137 422
Msa0231310 AT4G32650.2 46.998 483 252 4 36 515 51 532 7.31e-137 419
Msa0231310 AT5G37500.1 32.739 785 487 17 61 826 56 818 6.85e-127 400
Msa0231310 AT5G37500.2 31.846 807 487 18 61 826 56 840 9.87e-122 387
Msa0231310 AT3G02850.1 31.458 782 498 16 58 824 70 828 2.21e-120 383
Msa0231310 AT5G37500.3 31.830 798 481 18 70 826 11 786 4.99e-120 381
Msa0231310 AT3G02850.2 33.696 644 406 10 58 689 70 704 9.26e-116 369
Msa0231310 AT5G37500.4 33.784 666 392 14 61 689 56 709 3.66e-112 358
Msa0231310 AT3G02850.3 34.667 525 322 10 58 570 70 585 1.15e-95 311
Msa0231310 AT5G57940.1 24.457 184 138 1 258 440 365 548 3.52e-13 73.9
Msa0231310 AT5G57940.2 24.457 184 138 1 258 440 365 548 3.52e-13 73.9
Msa0231310 AT2G23980.9 24.044 183 138 1 259 440 382 564 3.82e-13 73.9
Msa0231310 AT2G23980.10 24.044 183 138 1 259 440 382 564 3.82e-13 73.9
Msa0231310 AT2G23980.1 24.044 183 138 1 259 440 382 564 3.82e-13 73.9
Msa0231310 AT2G23980.4 24.044 183 138 1 259 440 382 564 3.82e-13 73.9
Msa0231310 AT2G23980.5 24.044 183 138 1 259 440 382 564 3.82e-13 73.9
Msa0231310 AT2G23980.6 24.044 183 138 1 259 440 355 537 3.88e-13 73.9
Msa0231310 AT5G57940.3 24.457 184 138 1 258 440 358 541 4.05e-13 73.6
Msa0231310 AT2G23980.3 24.044 183 138 1 259 440 405 587 4.35e-13 73.6
Msa0231310 AT2G23980.2 24.044 183 138 1 259 440 405 587 4.35e-13 73.6
Msa0231310 AT2G23980.8 24.044 183 138 1 259 440 405 587 4.35e-13 73.6
Msa0231310 AT2G23980.7 24.044 183 138 1 259 440 405 587 4.35e-13 73.6
Msa0231310 AT4G30560.1 23.529 204 153 2 259 459 381 584 1.05e-12 72.4
Msa0231310 AT4G30560.4 23.529 204 153 2 259 459 381 584 1.05e-12 72.4
Msa0231310 AT4G30560.5 23.529 204 153 2 259 459 355 558 1.11e-12 72.4
Msa0231310 AT4G30560.2 23.529 204 153 2 259 459 355 558 1.11e-12 72.4
Msa0231310 AT4G30560.3 23.529 204 153 2 259 459 355 558 1.11e-12 72.4
Msa0231310 AT5G53130.1 21.591 264 193 6 259 514 354 611 4.14e-12 70.5
Msa0231310 AT2G46430.1 22.348 264 193 5 259 516 345 602 5.04e-12 70.1
Msa0231310 AT2G46430.2 22.348 264 193 5 259 516 345 602 5.04e-12 70.1
Msa0231310 AT1G19780.2 22.059 204 156 2 259 459 165 368 8.09e-12 69.3
Msa0231310 AT1G15990.1 22.059 204 156 2 259 459 370 573 1.62e-11 68.6
Msa0231310 AT1G19780.1 22.059 204 156 2 259 459 376 579 1.87e-11 68.6
Msa0231310 AT2G28260.1 22.348 264 191 6 259 514 339 596 3.53e-11 67.4
Msa0231310 AT2G28260.2 22.348 264 191 6 259 514 299 556 4.46e-11 67.0
Msa0231310 AT5G15410.1 24.907 269 189 6 247 511 387 646 4.77e-11 67.0
Msa0231310 AT5G15410.2 25.000 268 188 6 248 511 387 645 4.85e-11 67.0

Find 138 sgRNAs with CRISPR-Local

Find 381 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTAGGAATGCTCAGATTT+TGG 0.159603 2_2:-3500186 Msa0231310:CDS
ACATCAGGTTCAGCTATTTC+TGG 0.198095 2_2:-3500037 Msa0231310:CDS
ACAATATATAGTTTCCTATT+TGG 0.215703 2_2:+3502578 None:intergenic
TTACATGTGTTTGAGATTTA+AGG 0.223816 2_2:-3499389 Msa0231310:CDS
GATATATTTCGGCTATTTAT+TGG 0.227129 2_2:-3499769 Msa0231310:CDS
TTTGAGTATCAAAGATTTAA+TGG 0.236263 2_2:-3498542 Msa0231310:CDS
CATCTTCATCTTTCAATCTA+AGG 0.250699 2_2:-3503538 Msa0231310:CDS
AAGAAGAACAGAAGCAGATT+TGG 0.263100 2_2:-3497496 Msa0231310:CDS
GCCTAGTGAGTATGTATTAA+AGG 0.268009 2_2:-3497528 Msa0231310:CDS
TTGAAGCTGGAAAGTTAATA+AGG 0.269326 2_2:-3497394 Msa0231310:CDS
AAATTGCTCTCCATTATTCT+TGG 0.270259 2_2:+3503638 None:intergenic
TCATGCACTCTTCTCCAAAT+AGG 0.277810 2_2:-3502592 Msa0231310:CDS
CCTCTTTCTCTTCTCACTAC+TGG 0.287529 2_2:+3497422 None:intergenic
ACCTTGGAGGCAACCGATTT+CGG 0.300414 2_2:+3499431 None:intergenic
CCCTCATTCACCAAGAATAA+TGG 0.300734 2_2:-3503648 Msa0231310:exon
CAGAATTCAGTTTGCTCAAA+AGG 0.301833 2_2:-3503473 Msa0231310:CDS
ACATGCAACATACATATAAA+AGG 0.309366 2_2:-3498007 Msa0231310:intron
CCCTCGGATTAGATATATTT+CGG 0.310670 2_2:-3499780 Msa0231310:CDS
AGTCTACCTTACTACCTCTT+AGG 0.314962 2_2:-3500202 Msa0231310:CDS
TTGAGCTTCTCTAATGAATC+AGG 0.315266 2_2:+3497368 None:intergenic
AGAAGAACAGAAGCAGATTT+GGG 0.323990 2_2:-3497495 Msa0231310:CDS
CAAAACATCACTCAATATTC+AGG 0.328587 2_2:-3497865 Msa0231310:CDS
TGCATGATTACATCCTCTTT+AGG 0.345609 2_2:+3498940 None:intergenic
GGGCTTGTCTCTCTGAAGTT+TGG 0.349117 2_2:+3499800 None:intergenic
GGCCTAACTGCTTACTTGAT+TGG 0.352928 2_2:-3499650 Msa0231310:CDS
GCAGCATTTCAAGCAGCTTA+AGG 0.358860 2_2:-3498566 Msa0231310:intron
CAGATTTGGGGAAGATATAA+TGG 0.360704 2_2:-3497482 Msa0231310:CDS
TTCTTCGTCGCATACGTAGA+TGG 0.370898 2_2:-3502509 Msa0231310:CDS
AAGTTGGTGCACTTTGTTGT+AGG 0.381347 2_2:-3498801 Msa0231310:CDS
TTCTACATGCTCTTCAACCT+TGG 0.382767 2_2:-3499671 Msa0231310:CDS
AACAAATTCACAGCCATGTT+AGG 0.383420 2_2:+3498496 None:intergenic
CAGAAGCTGTGTTAGAGTCT+TGG 0.386691 2_2:+3498756 None:intergenic
GAGAAGCTCAAAATTATTGC+AGG 0.389605 2_2:-3497356 Msa0231310:intron
ATTCTGCAGAAACGCGAAAT+CGG 0.389644 2_2:-3497578 Msa0231310:CDS
CTAACAACTGGAGACATGTT+TGG 0.390676 2_2:-3498826 Msa0231310:CDS
CTGCAGAATTTCATTTAAGA+TGG 0.391532 2_2:+3497592 None:intergenic
ATAATGAAGAAGAATAATAT+TGG 0.405347 2_2:+3503710 None:intergenic
CATCAGGTTCAGCTATTTCT+GGG 0.410742 2_2:-3500036 Msa0231310:CDS
GGAGCTTCTAAGAGCTGGTT+TGG 0.417673 2_2:-3498437 Msa0231310:CDS
CAGCACATAGCTGCATCAAA+TGG 0.427788 2_2:-3498064 Msa0231310:CDS
ATGACAAATCTTGTTGTTGA+AGG 0.429751 2_2:-3499623 Msa0231310:CDS
ACTATACCATATGAAGCAAT+AGG 0.431353 2_2:-3500253 Msa0231310:CDS
GAAAGAGGTTTCATTGAAGC+TGG 0.432526 2_2:-3497407 Msa0231310:CDS
TCCATTATTCTTGGTGAATG+AGG 0.439323 2_2:+3503647 None:intergenic
CTCGAGGAGCTTCTAAGAGC+TGG 0.442942 2_2:-3498442 Msa0231310:CDS
AAGTAGCCTATTGCTTCATA+TGG 0.443165 2_2:+3500247 None:intergenic
CATTGCTTCTATAAGATCAC+TGG 0.444377 2_2:+3498723 None:intergenic
AGCATTCCTAAGAGGTAGTA+AGG 0.447195 2_2:+3500196 None:intergenic
CTCTTTCTCTTCTCACTACT+GGG 0.447423 2_2:+3497423 None:intergenic
AATAATCTTCTTTAACATCA+TGG 0.450043 2_2:+3503567 None:intergenic
AATCTCTTACTAGGGACAAA+AGG 0.450352 2_2:+3499239 None:intergenic
CTTGTCAACATGGTTCCTAA+TGG 0.452648 2_2:-3500287 Msa0231310:CDS
TAGTTGATGCCACATCCATT+AGG 0.456566 2_2:+3500272 None:intergenic
TATTATAGTGTCAGGAGAAG+TGG 0.457082 2_2:-3498893 Msa0231310:CDS
TTTGGTAGCTTATTCTGCAT+GGG 0.460459 2_2:-3502636 Msa0231310:CDS
CCTCTATATATGCTTACTCT+TGG 0.468020 2_2:+3497449 None:intergenic
ACTATAATATAAACATCATC+TGG 0.473586 2_2:+3498907 None:intergenic
AGGAGATTGCCTGCTGTGTA+TGG 0.474283 2_2:+3497812 None:intergenic
GATGTTTATATTATAGTGTC+AGG 0.474688 2_2:-3498901 Msa0231310:CDS
ATTCAGTTTGCTCAAAAGGC+TGG 0.475995 2_2:-3503469 Msa0231310:CDS
AAAAGCAGCATTGCCCGTGC+TGG 0.477728 2_2:+3498465 None:intergenic
ATGCCTTTGCAAATTGACTT+TGG 0.487312 2_2:+3499328 None:intergenic
CACCAATGGATTCTAGATAC+AGG 0.487320 2_2:-3503439 Msa0231310:intron
CATGAAGGAAAGACATGGAT+TGG 0.492441 2_2:-3499833 Msa0231310:CDS
TTGTTAACTGTGGCCAGCAC+GGG 0.493877 2_2:-3498478 Msa0231310:CDS
AGATAGACTTTCTCTACAGT+TGG 0.494483 2_2:+3499286 None:intergenic
TTCTTGGTGAATGAGGGAAA+TGG 0.496381 2_2:+3503654 None:intergenic
TTAAAGATGAAAAGAAAGAA+AGG 0.499281 2_2:+3503733 None:intergenic
AAGCTCATTCTTCCACCACT+TGG 0.499728 2_2:-3503506 Msa0231310:CDS
AGATTTAATGGTGGAAAATG+TGG 0.502148 2_2:-3498530 Msa0231310:CDS
ATCTCAAACACATGTAAGCC+AGG 0.506236 2_2:+3499395 None:intergenic
ATCCATGTCTTTCCTTCATG+AGG 0.507560 2_2:+3499836 None:intergenic
TGCATGAAAGCAACTTCAAA+GGG 0.510447 2_2:+3502608 None:intergenic
GTTCAGTTGCTTGTCATGAA+CGG 0.510748 2_2:-3497656 Msa0231310:CDS
AAAATCTGAGCATTCCTAAG+AGG 0.515366 2_2:+3500188 None:intergenic
GCCGAAATCGGTTGCCTCCA+AGG 0.520226 2_2:-3499432 Msa0231310:CDS
CAATAATTGGCAGATATGAA+TGG 0.520868 2_2:-3497917 Msa0231310:intron
CCATTATTCTTGGTGAATGA+GGG 0.521100 2_2:+3503648 None:intergenic
AATAATGAAAATCATTTCCA+TGG 0.522992 2_2:+3499694 None:intergenic
AGCACATAGCTGCATCAAAT+GGG 0.523495 2_2:-3498063 Msa0231310:CDS
ACCATGACAACTGTTGGTTA+TGG 0.524484 2_2:-3499737 Msa0231310:CDS
GTGACATACAGAAAGAAGTC+TGG 0.527667 2_2:+3500004 None:intergenic
AGTAATTCTTACAAATTCCA+TGG 0.528541 2_2:+3499589 None:intergenic
CCAGTAGTGAGAAGAGAAAG+AGG 0.530706 2_2:-3497422 Msa0231310:CDS
GCTGGTTTGGATCCTGACAT+TGG 0.531546 2_2:-3498424 Msa0231310:CDS
TGAATGGTGACAATGCACTA+TGG 0.532424 2_2:-3497901 Msa0231310:CDS
GGAGACATGTTTGGAGAAGT+TGG 0.533278 2_2:-3498817 Msa0231310:CDS
TATCAGCTAGCATGTAATAG+AGG 0.535299 2_2:+3499864 None:intergenic
TAAAGATGAAAAGAAAGAAA+GGG 0.539961 2_2:+3503734 None:intergenic
AGAGTACATACCACCTAAAG+AGG 0.540424 2_2:-3498953 Msa0231310:CDS
GAGAAAGTCTATCTCTTCAA+AGG 0.541403 2_2:-3499277 Msa0231310:CDS
GTGCATGAAAGCAACTTCAA+AGG 0.548004 2_2:+3502607 None:intergenic
AAAGAGCAGATAGCTGATAG+AGG 0.548443 2_2:+3497840 None:intergenic
AAGGTTAAAAGAGCAGATCC+TGG 0.552115 2_2:-3499413 Msa0231310:CDS
GCAGGCTTGAGAAAGACATC+AGG 0.553572 2_2:-3500052 Msa0231310:intron
TTTGTTAACTGTGGCCAGCA+CGG 0.553820 2_2:-3498479 Msa0231310:CDS
CTTTCTGATCCATACACAGC+AGG 0.558919 2_2:-3497821 Msa0231310:CDS
AACAGTTGTCATGGTAGTGA+TGG 0.561364 2_2:+3499745 None:intergenic
CATTAGTGCTACATATAGCT+AGG 0.565623 2_2:-3503805 Msa0231310:five_prime_UTR
AGGCTGGATCATATCACCAA+TGG 0.568421 2_2:-3503453 Msa0231310:CDS
GACAGCTATCCAAATTGCTA+TGG 0.571064 2_2:-3497699 Msa0231310:CDS
AAATAGGAAACTATATATTG+TGG 0.571721 2_2:-3502576 Msa0231310:CDS
ATCACTACCATGACAACTGT+TGG 0.583381 2_2:-3499743 Msa0231310:CDS
ACCATAACCAACAGTTGTCA+TGG 0.583525 2_2:+3499736 None:intergenic
GCCGAAATATATCTAATCCG+AGG 0.586677 2_2:+3499779 None:intergenic
ATGATTACATCCTCTTTAGG+TGG 0.587618 2_2:+3498943 None:intergenic
GCTGATATGTACCCTCATGA+AGG 0.587871 2_2:-3499848 Msa0231310:CDS
ACAATGGTGACAAATGAAGA+AGG 0.595250 2_2:-3497040 Msa0231310:CDS
TACCTGTATCTAGAATCCAT+TGG 0.598520 2_2:+3503437 None:intergenic
TCAAGTAAGCAGTTAGGCCA+AGG 0.601963 2_2:+3499654 None:intergenic
CCGAAATATATCTAATCCGA+GGG 0.602786 2_2:+3499780 None:intergenic
CCAAGAGTAAGCATATATAG+AGG 0.605074 2_2:-3497449 Msa0231310:CDS
GAGTATCAAAGATTTAATGG+TGG 0.606579 2_2:-3498539 Msa0231310:CDS
GGCAGAAAATCATGTGGACA+TGG 0.607182 2_2:-3497678 Msa0231310:CDS
TCCATGTCTTTCCTTCATGA+GGG 0.608602 2_2:+3499837 None:intergenic
TGCTATGGCAGAAAATCATG+TGG 0.613651 2_2:-3497684 Msa0231310:CDS
AGCTATATGTAGCACTAATG+TGG 0.619663 2_2:+3503808 None:intergenic
GGAGGAAGACGATCCTAACA+TGG 0.626905 2_2:-3498509 Msa0231310:CDS
TAATACATACTCACTAGGCA+TGG 0.628449 2_2:+3497532 None:intergenic
AACATGGTTCCTAATGGATG+TGG 0.629876 2_2:-3500281 Msa0231310:CDS
TACCAATCAAGTAAGCAGTT+AGG 0.631238 2_2:+3499648 None:intergenic
ACCTTTAATACATACTCACT+AGG 0.632039 2_2:+3497527 None:intergenic
ATGCTAGAGTCTAAGTCATG+AGG 0.634864 2_2:+3503602 None:intergenic
CTACCAAAGTCAATTTGCAA+AGG 0.635237 2_2:-3499331 Msa0231310:CDS
GTGTCAAGCAATTCTTCACA+AGG 0.635692 2_2:-3500153 Msa0231310:intron
GAGACAGGTACTTGTCAACA+TGG 0.642538 2_2:-3500297 Msa0231310:intron
TTTAATGGTGGAAAATGTGG+AGG 0.648940 2_2:-3498527 Msa0231310:CDS
GTTCTGTATGTAAAACTCTG+AGG 0.652805 2_2:+3498778 None:intergenic
TGAAGGAACTCGTCGCACCA+TGG 0.655001 2_2:-3499606 Msa0231310:CDS
ACATCTAATTAATGTGAGTG+AGG 0.655673 2_2:-3497555 Msa0231310:CDS
GAAGAACAGAAGCAGATTTG+GGG 0.656031 2_2:-3497494 Msa0231310:CDS
GTTTGATGCAAAAGATACAA+TGG 0.657320 2_2:-3497056 Msa0231310:CDS
TCTTCATGCTGTCAACACCA+TGG 0.661096 2_2:-3499711 Msa0231310:CDS
GGCTGTGAATTTGTTAACTG+TGG 0.662660 2_2:-3498488 Msa0231310:CDS
ACTTCAGAGAGACAAGCCCT+CGG 0.672053 2_2:-3499796 Msa0231310:CDS
GAAAGGGTAAGCTCAACACA+AGG 0.676119 2_2:+3503750 None:intergenic
ACCCTCATGAAGGAAAGACA+TGG 0.681708 2_2:-3499838 Msa0231310:CDS
ATTGACTCAAAAGATCGACA+TGG 0.721906 2_2:-3497725 Msa0231310:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAGTTAATAAACTAAAAA+TGG - chr2_2:3497277-3497296 Msa0231310:intron 10.0%
!!! AAACATAAAATTTTTTTTCT+TGG + chr2_2:3497371-3497390 None:intergenic 10.0%
!! GTAAAAAATTAATTAGTATA+AGG + chr2_2:3498044-3498063 None:intergenic 10.0%
!!! TTTTGTCTTTTTTTTTTTTT+TGG - chr2_2:3498064-3498083 Msa0231310:CDS 10.0%
!!! AATATTAAATTGTTTTTTGA+AGG + chr2_2:3498305-3498324 None:intergenic 10.0%
!! ATCAGATATATATATATTTA+GGG + chr2_2:3499013-3499032 None:intergenic 10.0%
!! AACAAACATATAATATAATA+AGG - chr2_2:3500059-3500078 Msa0231310:intron 10.0%
!!! ATATTTAACTTAACAATAAT+TGG - chr2_2:3502522-3502541 Msa0231310:CDS 10.0%
!!! CTTGTTTTATAAAAAAATAA+AGG - chr2_2:3503620-3503639 Msa0231310:CDS 10.0%
!!! TAGAGTTAATAATTTATTTT+TGG + chr2_2:3503916-3503935 None:intergenic 10.0%
!! ATAATGAAGAAGAATAATAT+TGG + chr2_2:3496745-3496764 None:intergenic 15.0%
!!! TTATTCTTCTTCATTATTTT+AGG - chr2_2:3496748-3496767 Msa0231310:intron 15.0%
!!! ATTTTATATTGATTCCTTTT+AGG - chr2_2:3497102-3497121 Msa0231310:intron 15.0%
!!! CCTAATTTTTTGTTAAATTA+TGG + chr2_2:3497187-3497206 None:intergenic 15.0%
!! CCATAATTTAACAAAAAATT+AGG - chr2_2:3497184-3497203 Msa0231310:intron 15.0%
!! ATGTGAGATATTATTATATT+CGG + chr2_2:3498573-3498592 None:intergenic 15.0%
!!! AAAAATTTAAGACATTTTTC+AGG + chr2_2:3498805-3498824 None:intergenic 15.0%
!! TCAGATATATATATATTTAG+GGG + chr2_2:3499012-3499031 None:intergenic 15.0%
!! CATCAGATATATATATATTT+AGG + chr2_2:3499014-3499033 None:intergenic 15.0%
!! CTAAATATATATATATCTGA+TGG - chr2_2:3499012-3499031 Msa0231310:intron 15.0%
!!! AGTTAATTTTTAAAGTTTCA+AGG - chr2_2:3499447-3499466 Msa0231310:CDS 15.0%
!!! AGAATGATTTTGTATATTTT+AGG - chr2_2:3499706-3499725 Msa0231310:CDS 15.0%
!!! GAATGATTTTGTATATTTTA+GGG - chr2_2:3499707-3499726 Msa0231310:CDS 15.0%
!!! AAGTATTTGAACATTTTATT+GGG + chr2_2:3499891-3499910 None:intergenic 15.0%
!! TTTCATTCTCTTAAATTATT+AGG - chr2_2:3502237-3502256 Msa0231310:intron 15.0%
!! AAAAGTCAAAACTATATTAA+AGG + chr2_2:3502313-3502332 None:intergenic 15.0%
!! AAATATATGTCTTAAGTTAA+AGG + chr2_2:3502474-3502493 None:intergenic 15.0%
!!! TATCAAAACAACATTTTCAT+TGG - chr2_2:3496610-3496629 Msa0231310:intron 20.0%
!!! ATCAAAACAACATTTTCATT+GGG - chr2_2:3496611-3496630 Msa0231310:intron 20.0%
!! TAAAGATGAAAAGAAAGAAA+GGG + chr2_2:3496721-3496740 None:intergenic 20.0%
!! TTAAAGATGAAAAGAAAGAA+AGG + chr2_2:3496722-3496741 None:intergenic 20.0%
!! AATAATCTTCTTTAACATCA+TGG + chr2_2:3496888-3496907 None:intergenic 20.0%
!! AGTATAATATTAAGAGACAA+AGG + chr2_2:3497070-3497089 None:intergenic 20.0%
!! AAGTTAAGTATTTACCTAAA+AGG + chr2_2:3497119-3497138 None:intergenic 20.0%
!! TTAGTGTATGTTTGAATTTA+AGG - chr2_2:3497141-3497160 Msa0231310:intron 20.0%
!!! TAACTACTAGCATTAATTTT+AGG - chr2_2:3497228-3497247 Msa0231310:intron 20.0%
!!! AACTACTAGCATTAATTTTA+GGG - chr2_2:3497229-3497248 Msa0231310:intron 20.0%
!! GTTAACTTTATATACTATGA+GGG + chr2_2:3497457-3497476 None:intergenic 20.0%
!! AGTTAACTTTATATACTATG+AGG + chr2_2:3497458-3497477 None:intergenic 20.0%
!! ACAATATATAGTTTCCTATT+TGG + chr2_2:3497877-3497896 None:intergenic 20.0%
!! AAATAGGAAACTATATATTG+TGG - chr2_2:3497876-3497895 Msa0231310:CDS 20.0%
!! TAATTAGTATAAGGTTTGAA+TGG + chr2_2:3498035-3498054 None:intergenic 20.0%
!! TATGTAAACGTCTAAATTAA+TGG - chr2_2:3498161-3498180 Msa0231310:intron 20.0%
!! CTGAATTAATTATTGTATAG+TGG - chr2_2:3498198-3498217 Msa0231310:intron 20.0%
!! AATTAATTATTGTATAGTGG+AGG - chr2_2:3498201-3498220 Msa0231310:intron 20.0%
!! TGCTAAACAAAATAAATAAG+TGG + chr2_2:3498365-3498384 None:intergenic 20.0%
!! TTATGTAACACCTAAAATAA+TGG - chr2_2:3498397-3498416 Msa0231310:intron 20.0%
!! TATGTAACACCTAAAATAAT+GGG - chr2_2:3498398-3498417 Msa0231310:intron 20.0%
!! TGGTAATATTGAAATGAAAA+AGG - chr2_2:3498531-3498550 Msa0231310:CDS 20.0%
!! TGTGAGATATTATTATATTC+GGG + chr2_2:3498572-3498591 None:intergenic 20.0%
!!! AAGAATAAGAATTTGGAATT+TGG + chr2_2:3498681-3498700 None:intergenic 20.0%
!! AAATTCCAAATTCTTATTCT+TGG - chr2_2:3498680-3498699 Msa0231310:CDS 20.0%
!! ATATCAAAGTTATCAAACTT+AGG + chr2_2:3498735-3498754 None:intergenic 20.0%
!! ACTATCGTTAATCATTATTA+AGG + chr2_2:3498829-3498848 None:intergenic 20.0%
!! CAGATATATATATATTTAGG+GGG + chr2_2:3499011-3499030 None:intergenic 20.0%
!! ATAACTATGATGTGTATTTA+TGG - chr2_2:3499081-3499100 Msa0231310:intron 20.0%
!! TTATGGAACCTTAAATATAT+TGG - chr2_2:3499098-3499117 Msa0231310:intron 20.0%
!! AAATATTGAAACAAATCAGT+GGG - chr2_2:3499134-3499153 Msa0231310:intron 20.0%
!!! CAAAAGAGAAAGTTTTTTTT+GGG + chr2_2:3499489-3499508 None:intergenic 20.0%
!!! TCAAAAGAGAAAGTTTTTTT+TGG + chr2_2:3499490-3499509 None:intergenic 20.0%
!!! CAAGTATTTGAACATTTTAT+TGG + chr2_2:3499892-3499911 None:intergenic 20.0%
!!! GAAAATTGATTTATTTTCCT+TGG - chr2_2:3500378-3500397 Msa0231310:intron 20.0%
!! AGTGATTATGTTGAAAATTA+TGG - chr2_2:3500528-3500547 Msa0231310:intron 20.0%
!! AATAATGAAAATCATTTCCA+TGG + chr2_2:3500761-3500780 None:intergenic 20.0%
!! CAAAATTTAATCTCTTACTA+GGG + chr2_2:3501224-3501243 None:intergenic 20.0%
!! TCAAAATTTAATCTCTTACT+AGG + chr2_2:3501225-3501244 None:intergenic 20.0%
!!! TTGATTTTTACACTTCTATA+TGG - chr2_2:3501241-3501260 Msa0231310:intron 20.0%
!! ACTATAATATAAACATCATC+TGG + chr2_2:3501548-3501567 None:intergenic 20.0%
!! TTTGAGTATCAAAGATTTAA+TGG - chr2_2:3501910-3501929 Msa0231310:intron 20.0%
!! AAAACTATAAACTTATCTGT+TGG - chr2_2:3502357-3502376 Msa0231310:intron 20.0%
!! CACAAATAAAATCATAAATC+AGG + chr2_2:3503355-3503374 None:intergenic 20.0%
!!! TGATTTTATTTGTGTACAAT+AGG - chr2_2:3503361-3503380 Msa0231310:intron 20.0%
!!! TCTTTTTTGTTTTTCATTGT+TGG - chr2_2:3503553-3503572 Msa0231310:CDS 20.0%
!!! ATGTTGTTTTGATATATAGC+TGG + chr2_2:3496604-3496623 None:intergenic 25.0%
!!! TTCTCATCACTTTTTCTAAT+TGG + chr2_2:3498452-3498471 None:intergenic 25.0%
! GATATTATTATATTCGGGAA+TGG + chr2_2:3498567-3498586 None:intergenic 25.0%
! ATCAAACTTAGGTTCAAATT+AGG + chr2_2:3498724-3498743 None:intergenic 25.0%
!!! ATTTAAGACATTTTTCAGGT+TGG + chr2_2:3498801-3498820 None:intergenic 25.0%
!! AAGATTTCTGAAAACAAATC+AGG - chr2_2:3498952-3498971 Msa0231310:CDS 25.0%
! CAAATATTGAAACAAATCAG+TGG - chr2_2:3499133-3499152 Msa0231310:intron 25.0%
! TGCTTACTCTTCTAATTTAT+CGG - chr2_2:3499246-3499265 Msa0231310:intron 25.0%
!! AGTATTTCCCTTTAAAGAAT+AGG - chr2_2:3499542-3499561 Msa0231310:intron 25.0%
!! ATCATTTTCATTTCTCACAT+GGG + chr2_2:3499648-3499667 None:intergenic 25.0%
!! TATCATTTTCATTTCTCACA+TGG + chr2_2:3499649-3499668 None:intergenic 25.0%
!!! TGTATATTTTAGGGAAAGAA+TGG - chr2_2:3499716-3499735 Msa0231310:CDS 25.0%
!! AATTTTCACACACATTCATA+TGG + chr2_2:3500365-3500384 None:intergenic 25.0%
! GATATATTTCGGCTATTTAT+TGG - chr2_2:3500683-3500702 Msa0231310:intron 25.0%
! AGTAATTCTTACAAATTCCA+TGG + chr2_2:3500866-3500885 None:intergenic 25.0%
!! TAAATGATAATGTGAAGTAG+TGG + chr2_2:3500892-3500911 None:intergenic 25.0%
!! TTACATGTGTTTGAGATTTA+AGG - chr2_2:3501063-3501082 Msa0231310:intron 25.0%
! GATGTTTATATTATAGTGTC+AGG - chr2_2:3501551-3501570 Msa0231310:intron 25.0%
!! ATAGAGAAAGAGAGAATTTT+AGG - chr2_2:3501599-3501618 Msa0231310:intron 25.0%
! AATACTCAAAAATTTCCTTC+AGG - chr2_2:3501778-3501797 Msa0231310:intron 25.0%
!!! ATGATGTATAAGCTTTAGAA+TGG + chr2_2:3501847-3501866 None:intergenic 25.0%
! ACATGCAACATACATATAAA+AGG - chr2_2:3502445-3502464 Msa0231310:intron 25.0%
!!! TCTATGATTTCGTTTTTAGA+AGG - chr2_2:3502496-3502515 Msa0231310:CDS 25.0%
!! GAAATCTAGTTGTTGTTAAA+TGG - chr2_2:3503244-3503263 Msa0231310:intron 25.0%
! TGTACAATAGGTGAAAAATT+TGG - chr2_2:3503373-3503392 Msa0231310:intron 25.0%
! GTACAATAGGTGAAAAATTT+GGG - chr2_2:3503374-3503393 Msa0231310:intron 25.0%
!!! CAAACTTTTTTTTGTTGAAG+AGG - chr2_2:3503474-3503493 Msa0231310:CDS 25.0%
!!! AACTTTTTTCTTTTGTCACA+AGG - chr2_2:3503587-3503606 Msa0231310:CDS 25.0%
! AAGTTTCTAATGTTTCAGAT+AGG + chr2_2:3503810-3503829 None:intergenic 25.0%
! CTGAAACATTAGAAACTTAA+AGG - chr2_2:3503812-3503831 Msa0231310:five_prime_UTR 25.0%
!! TACTTTTAATCTCTCTGTAA+TGG - chr2_2:3503934-3503953 Msa0231310:five_prime_UTR 25.0%
AAATTGCTCTCCATTATTCT+TGG + chr2_2:3496817-3496836 None:intergenic 30.0%
CATCTTCATCTTTCAATCTA+AGG - chr2_2:3496914-3496933 Msa0231310:three_prime_UTR 30.0%
AAGGAGTTGGAAAATTAAGT+TGG + chr2_2:3497051-3497070 None:intergenic 30.0%
ATATTAAGAGACAAAGGAGT+TGG + chr2_2:3497064-3497083 None:intergenic 30.0%
!! CATGTTAACTTGTACACTTA+AGG - chr2_2:3497253-3497272 Msa0231310:intron 30.0%
!! ATATGTTAACTTGTGCCTTT+GGG + chr2_2:3497411-3497430 None:intergenic 30.0%
!! AATATGTTAACTTGTGCCTT+TGG + chr2_2:3497412-3497431 None:intergenic 30.0%
!! AGTCATTTCAACGTTGTTTT+TGG - chr2_2:3497621-3497640 Msa0231310:CDS 30.0%
! TTAAAGCAATCTTTTTGTGC+AGG - chr2_2:3497770-3497789 Msa0231310:CDS 30.0%
!! GGAGAGTTTTATGGTTATTT+TGG - chr2_2:3497798-3497817 Msa0231310:CDS 30.0%
ATTCCAAAAAAATTGCTGTC+AGG - chr2_2:3497989-3498008 Msa0231310:intron 30.0%
!!! TTACCTGACAGCAATTTTTT+TGG + chr2_2:3497995-3498014 None:intergenic 30.0%
TAAGGTTTGAATGGAATATG+TGG + chr2_2:3498026-3498045 None:intergenic 30.0%
!! TGCAAAGTACCCATTATTTT+AGG + chr2_2:3498410-3498429 None:intergenic 30.0%
CCTATCCAAGAATAAGAATT+TGG + chr2_2:3498688-3498707 None:intergenic 30.0%
CCAAATTCTTATTCTTGGAT+AGG - chr2_2:3498685-3498704 Msa0231310:CDS 30.0%
AAAATCAACACCTGAATAGT+TGG + chr2_2:3498766-3498785 None:intergenic 30.0%
TGATTAACGATAGTAGTTGT+AGG - chr2_2:3498835-3498854 Msa0231310:CDS 30.0%
TAGATAAGATAATGAACACC+TGG - chr2_2:3498891-3498910 Msa0231310:CDS 30.0%
!!! TAGACCCTCCAATATTTTTT+AGG - chr2_2:3498985-3499004 Msa0231310:intron 30.0%
TGGAACCTTAAATATATTGG+AGG - chr2_2:3499101-3499120 Msa0231310:intron 30.0%
GGAACCTTAAATATATTGGA+GGG - chr2_2:3499102-3499121 Msa0231310:intron 30.0%
TAGACCCTCCAATATATTTA+AGG + chr2_2:3499109-3499128 None:intergenic 30.0%
TGGGTACTAGAAAGTAAAAT+CGG - chr2_2:3499153-3499172 Msa0231310:intron 30.0%
ATTAGAAGAGTAAGCAAAAC+TGG + chr2_2:3499242-3499261 None:intergenic 30.0%
AATACTAACAAGTGCTCTAA+GGG + chr2_2:3499528-3499547 None:intergenic 30.0%
AAATACTAACAAGTGCTCTA+AGG + chr2_2:3499529-3499548 None:intergenic 30.0%
TGGATTGCCTATTCTTTAAA+GGG + chr2_2:3499552-3499571 None:intergenic 30.0%
TTGGATTGCCTATTCTTTAA+AGG + chr2_2:3499553-3499572 None:intergenic 30.0%
! TAGTTGCTCTATGAATCTTT+TGG + chr2_2:3499572-3499591 None:intergenic 30.0%
CAAATATTTGTGACCATGTA+AGG + chr2_2:3499763-3499782 None:intergenic 30.0%
CTTACATGGTCACAAATATT+TGG - chr2_2:3499761-3499780 Msa0231310:CDS 30.0%
!! TGGTGTTATTGGAAAATACT+TGG + chr2_2:3499922-3499941 None:intergenic 30.0%
TTCATTCATCGTGTACAATT+TGG - chr2_2:3499979-3499998 Msa0231310:intron 30.0%
TCGTGTACAATTTGGATAAA+TGG - chr2_2:3499987-3500006 Msa0231310:intron 30.0%
ACTATACCATATGAAGCAAT+AGG - chr2_2:3500199-3500218 Msa0231310:CDS 30.0%
!! ATTGATTTATTTTCCTTGGC+AGG - chr2_2:3500382-3500401 Msa0231310:intron 30.0%
!! TAAATGCTTAGCTTTGACTA+GGG - chr2_2:3500485-3500504 Msa0231310:intron 30.0%
TATGTTGAAAATTATGGTGC+AGG - chr2_2:3500534-3500553 Msa0231310:intron 30.0%
! TATTTTCAGTTCATTGTGCT+GGG - chr2_2:3500563-3500582 Msa0231310:intron 30.0%
!! ATGACAAATCTTGTTGTTGA+AGG - chr2_2:3500829-3500848 Msa0231310:intron 30.0%
! TGTACTAATGCACAAGATTT+TGG - chr2_2:3500958-3500977 Msa0231310:intron 30.0%
GCTTATTTGATCATATCCAT+TGG + chr2_2:3501425-3501444 None:intergenic 30.0%
AATTTAGCGAACGTTTGAAT+TGG + chr2_2:3501447-3501466 None:intergenic 30.0%
CTAAATTGTGAATGTGTTGT+AGG - chr2_2:3501460-3501479 Msa0231310:intron 30.0%
GAGTATCAAAGATTTAATGG+TGG - chr2_2:3501913-3501932 Msa0231310:intron 30.0%
! AGATTTAATGGTGGAAAATG+TGG - chr2_2:3501922-3501941 Msa0231310:intron 30.0%
CTCAAAAGAAAAAACTCCAT+TGG - chr2_2:3502054-3502073 Msa0231310:intron 30.0%
CACATATATCAATGTCATGT+CGG + chr2_2:3502202-3502221 None:intergenic 30.0%
CAATAATTGGCAGATATGAA+TGG - chr2_2:3502535-3502554 Msa0231310:CDS 30.0%
CAAAACATCACTCAATATTC+AGG - chr2_2:3502587-3502606 Msa0231310:CDS 30.0%
!!! ATGCATGAACTTTTAAAGCA+AGG - chr2_2:3502697-3502716 Msa0231310:intron 30.0%
CTGCAGAATTTCATTTAAGA+TGG + chr2_2:3502863-3502882 None:intergenic 30.0%
ACATCTAATTAATGTGAGTG+AGG - chr2_2:3502897-3502916 Msa0231310:intron 30.0%
ACCTTTAATACATACTCACT+AGG + chr2_2:3502928-3502947 None:intergenic 30.0%
TTGAAGCTGGAAAGTTAATA+AGG - chr2_2:3503058-3503077 Msa0231310:intron 30.0%
TATAATTACTAGCGTGTAGA+TGG - chr2_2:3503169-3503188 Msa0231310:intron 30.0%
GTTTGATGCAAAAGATACAA+TGG - chr2_2:3503396-3503415 Msa0231310:intron 30.0%
GTTACAAACGTGAAACTTAA+AGG + chr2_2:3503872-3503891 None:intergenic 30.0%
! ATAGGTCCTTTAAGTTTCAA+AGG - chr2_2:3503687-3503706 Msa0231310:five_prime_UTR 30.0%
!! CTGTAACCTTTGAAACTTAA+AGG + chr2_2:3503841-3503860 None:intergenic 30.0%
AAGTTTCAAAGGTTACAGAT+AGG - chr2_2:3503698-3503717 Msa0231310:five_prime_UTR 30.0%
! ATAGGTCCTTTAAGTTTCTA+AGG - chr2_2:3503716-3503735 Msa0231310:five_prime_UTR 30.0%
CTGAAACCTTAGAAACTTAA+AGG + chr2_2:3503725-3503744 None:intergenic 30.0%
!! AAGTTTCTAAGGTTTCAGAT+AGG - chr2_2:3503727-3503746 Msa0231310:five_prime_UTR 30.0%
GAAACAAACTCGAAACTTAA+AGG + chr2_2:3503754-3503773 None:intergenic 30.0%
TGTTTCAGATAGGTCTTTAA+CGG + chr2_2:3503800-3503819 None:intergenic 30.0%
AAGTTTCAAAGGTTACAGAT+AGG + chr2_2:3503698-3503717 None:intergenic 30.0%
!! CTGTAACCTTTGAAACTTAA+AGG - chr2_2:3503841-3503860 Msa0231310:five_prime_UTR 30.0%
! ATAGGTCCTTTAAGTTTCAA+AGG + chr2_2:3503687-3503706 None:intergenic 30.0%
GTTACAAACGTGAAACTTAA+AGG - chr2_2:3503872-3503891 Msa0231310:five_prime_UTR 30.0%
AGCTATATGTAGCACTAATG+TGG + chr2_2:3496647-3496666 None:intergenic 35.0%
CATTAGTGCTACATATAGCT+AGG - chr2_2:3496647-3496666 Msa0231310:intron 35.0%
CCATTATTCTTGGTGAATGA+GGG + chr2_2:3496807-3496826 None:intergenic 35.0%
TCCATTATTCTTGGTGAATG+AGG + chr2_2:3496808-3496827 None:intergenic 35.0%
!!! TTCTGTTTTGAAACACCAAG+TGG + chr2_2:3496964-3496983 None:intergenic 35.0%
! CAGAATTCAGTTTGCTCAAA+AGG - chr2_2:3496979-3496998 Msa0231310:CDS 35.0%
! TACCTGTATCTAGAATCCAT+TGG + chr2_2:3497018-3497037 None:intergenic 35.0%
! TTTTTAAACTTGTGCCCCAA+AGG - chr2_2:3497393-3497412 Msa0231310:CDS 35.0%
!! TATGTTAACTTGTGCCTTTG+GGG + chr2_2:3497410-3497429 None:intergenic 35.0%
!! GGTCTCTAAATTTGTTACAC+CGG - chr2_2:3497642-3497661 Msa0231310:CDS 35.0%
!! TAAATTTGTTACACCGGTCA+TGG - chr2_2:3497648-3497667 Msa0231310:CDS 35.0%
! AATCTTTTTGTGCAGGTGTT+GGG - chr2_2:3497777-3497796 Msa0231310:CDS 35.0%
!! TTTTGGTAGCTTATTCTGCA+TGG - chr2_2:3497815-3497834 Msa0231310:CDS 35.0%
! TTTGGTAGCTTATTCTGCAT+GGG - chr2_2:3497816-3497835 Msa0231310:CDS 35.0%
TGCATGAAAGCAACTTCAAA+GGG + chr2_2:3497847-3497866 None:intergenic 35.0%
! TAGCTTGTAAAGTGTGAAAG+TGG - chr2_2:3498511-3498530 Msa0231310:CDS 35.0%
TCTTGGATAGGCTAAACATT+AGG - chr2_2:3498697-3498716 Msa0231310:CDS 35.0%
CTTGGATAGGCTAAACATTA+GGG - chr2_2:3498698-3498717 Msa0231310:CDS 35.0%
ATGTGTTAGACCAACTATTC+AGG - chr2_2:3498753-3498772 Msa0231310:CDS 35.0%
TTTAACCACGAGACTAGATA+TGG - chr2_2:3498920-3498939 Msa0231310:CDS 35.0%
TTAACCACGAGACTAGATAT+GGG - chr2_2:3498921-3498940 Msa0231310:CDS 35.0%
! GTTTTCAGAAATCTTGATCC+TGG + chr2_2:3498947-3498966 None:intergenic 35.0%
TTAGGGGGCCTAAAAAATAT+TGG + chr2_2:3498996-3499015 None:intergenic 35.0%
GGGTACTAGAAAGTAAAATC+GGG - chr2_2:3499154-3499173 Msa0231310:intron 35.0%
! TCCAGCAATTTAAAGCAATC+AGG - chr2_2:3499199-3499218 Msa0231310:intron 35.0%
! TCCTGATTGCTTTAAATTGC+TGG + chr2_2:3499203-3499222 None:intergenic 35.0%
TTCATAGAGCAACTAACATG+AGG - chr2_2:3499577-3499596 Msa0231310:intron 35.0%
GATGGAAGCTATGACATTTA+TGG + chr2_2:3499608-3499627 None:intergenic 35.0%
!!! GTGCAACAACTATTTTTGGA+TGG + chr2_2:3499626-3499645 None:intergenic 35.0%
! ATGGGTGCAACAACTATTTT+TGG + chr2_2:3499630-3499649 None:intergenic 35.0%
AACATAGAAGAAGCCTTACA+TGG - chr2_2:3499747-3499766 Msa0231310:CDS 35.0%
!! TGACTTGACATTGGTGTTAT+TGG + chr2_2:3499933-3499952 None:intergenic 35.0%
! TCAATGACTTGACTTGACAT+TGG + chr2_2:3499942-3499961 None:intergenic 35.0%
TCAACACACAGTTAAAGTGT+CGG + chr2_2:3500038-3500057 None:intergenic 35.0%
GTTGTTAGTAATGTTGAGAC+AGG - chr2_2:3500140-3500159 Msa0231310:intron 35.0%
AAGTAGCCTATTGCTTCATA+TGG + chr2_2:3500208-3500227 None:intergenic 35.0%
!!! GCAATAGGCTACTTTTTAAC+TGG - chr2_2:3500214-3500233 Msa0231310:CDS 35.0%
AAAATCTGAGCATTCCTAAG+AGG + chr2_2:3500267-3500286 None:intergenic 35.0%
! TCTTAGGAATGCTCAGATTT+TGG - chr2_2:3500266-3500285 Msa0231310:CDS 35.0%
!! CTAAATGCTTAGCTTTGACT+AGG - chr2_2:3500484-3500503 Msa0231310:intron 35.0%
! CTATTTTCAGTTCATTGTGC+TGG - chr2_2:3500562-3500581 Msa0231310:intron 35.0%
TATCAGCTAGCATGTAATAG+AGG + chr2_2:3500591-3500610 None:intergenic 35.0%
CCGAAATATATCTAATCCGA+GGG + chr2_2:3500675-3500694 None:intergenic 35.0%
! CCCTCGGATTAGATATATTT+CGG - chr2_2:3500672-3500691 Msa0231310:intron 35.0%
TACCAATCAAGTAAGCAGTT+AGG + chr2_2:3500807-3500826 None:intergenic 35.0%
TGTCATGAATTTCTTGTGAC+AGG + chr2_2:3500932-3500951 None:intergenic 35.0%
! CAAATTTTGTGTGCCGAAAT+CGG - chr2_2:3501008-3501027 Msa0231310:intron 35.0%
CTACCAAAGTCAATTTGCAA+AGG - chr2_2:3501121-3501140 Msa0231310:intron 35.0%
! ATGCCTTTGCAAATTGACTT+TGG + chr2_2:3501127-3501146 None:intergenic 35.0%
CAGTTGGAAAAAACAAATGC+TGG + chr2_2:3501153-3501172 None:intergenic 35.0%
AGATAGACTTTCTCTACAGT+TGG + chr2_2:3501169-3501188 None:intergenic 35.0%
GAGAAAGTCTATCTCTTCAA+AGG - chr2_2:3501175-3501194 Msa0231310:intron 35.0%
AATCTCTTACTAGGGACAAA+AGG + chr2_2:3501216-3501235 None:intergenic 35.0%
CGTCTATTTACGACAGAATA+TGG + chr2_2:3501390-3501409 None:intergenic 35.0%
GTTGTAGGTTGCAAAAATGA+AGG - chr2_2:3501475-3501494 Msa0231310:intron 35.0%
ATGATTACATCCTCTTTAGG+TGG + chr2_2:3501512-3501531 None:intergenic 35.0%
TGCATGATTACATCCTCTTT+AGG + chr2_2:3501515-3501534 None:intergenic 35.0%
TATTATAGTGTCAGGAGAAG+TGG - chr2_2:3501559-3501578 Msa0231310:intron 35.0%
! ATTTTAGGCACTCTAACAAC+TGG - chr2_2:3501614-3501633 Msa0231310:intron 35.0%
GTTCTGTATGTAAAACTCTG+AGG + chr2_2:3501677-3501696 None:intergenic 35.0%
CATTGCTTCTATAAGATCAC+TGG + chr2_2:3501732-3501751 None:intergenic 35.0%
CTCAAAAATTTCCTTCAGGT+TGG - chr2_2:3501782-3501801 Msa0231310:intron 35.0%
! TTTAATGGTGGAAAATGTGG+AGG - chr2_2:3501925-3501944 Msa0231310:intron 35.0%
AACAAATTCACAGCCATGTT+AGG + chr2_2:3501959-3501978 None:intergenic 35.0%
ATTAGACATGAGCATACCAA+TGG + chr2_2:3502073-3502092 None:intergenic 35.0%
CACGAAGGAACATCTTTAAA+AGG + chr2_2:3502107-3502126 None:intergenic 35.0%
TATGTCAGTGATATACACGA+AGG + chr2_2:3502122-3502141 None:intergenic 35.0%
CGACATGACATTGATATATG+TGG - chr2_2:3502200-3502219 Msa0231310:intron 35.0%
! TTCTTTTTGCTGCTGTACAT+AGG + chr2_2:3502663-3502682 None:intergenic 35.0%
! ATTGACTCAAAAGATCGACA+TGG - chr2_2:3502727-3502746 Msa0231310:intron 35.0%
! GATTTTCTGCCATAGCAATT+TGG + chr2_2:3502765-3502784 None:intergenic 35.0%
TAATACATACTCACTAGGCA+TGG + chr2_2:3502923-3502942 None:intergenic 35.0%
GCCTAGTGAGTATGTATTAA+AGG - chr2_2:3502924-3502943 Msa0231310:intron 35.0%
AAGAAGAACAGAAGCAGATT+TGG - chr2_2:3502956-3502975 Msa0231310:intron 35.0%
AGAAGAACAGAAGCAGATTT+GGG - chr2_2:3502957-3502976 Msa0231310:intron 35.0%
CAGATTTGGGGAAGATATAA+TGG - chr2_2:3502970-3502989 Msa0231310:intron 35.0%
CCTCTATATATGCTTACTCT+TGG + chr2_2:3503006-3503025 None:intergenic 35.0%
CCAAGAGTAAGCATATATAG+AGG - chr2_2:3503003-3503022 Msa0231310:intron 35.0%
TTGAGCTTCTCTAATGAATC+AGG + chr2_2:3503087-3503106 None:intergenic 35.0%
GAGAAGCTCAAAATTATTGC+AGG - chr2_2:3503096-3503115 Msa0231310:intron 35.0%
ACAATGGTGACAAATGAAGA+AGG - chr2_2:3503412-3503431 Msa0231310:intron 35.0%
! TTTCTTTTGTCACAAGGAAG+TGG - chr2_2:3503593-3503612 Msa0231310:CDS 35.0%
GTTTCACGTTTGTAACAGAT+AGG - chr2_2:3503669-3503688 Msa0231310:five_prime_UTR 35.0%
!! GTTTCGAGTTTGTTTCAGAT+AGG - chr2_2:3503758-3503777 Msa0231310:five_prime_UTR 35.0%
!! TTTAACGGAGGTTGATAGAA+AGG + chr2_2:3503785-3503804 None:intergenic 35.0%
GTTTCACGTTTGTAACAGAT+AGG + chr2_2:3503669-3503688 None:intergenic 35.0%
TTCTTGGTGAATGAGGGAAA+TGG + chr2_2:3496801-3496820 None:intergenic 40.0%
CCCTCATTCACCAAGAATAA+TGG - chr2_2:3496804-3496823 Msa0231310:intron 40.0%
ATGCTAGAGTCTAAGTCATG+AGG + chr2_2:3496853-3496872 None:intergenic 40.0%
!!! TGTTTTGAAACACCAAGTGG+TGG + chr2_2:3496961-3496980 None:intergenic 40.0%
! ATTCAGTTTGCTCAAAAGGC+TGG - chr2_2:3496983-3497002 Msa0231310:CDS 40.0%
! CACCAATGGATTCTAGATAC+AGG - chr2_2:3497013-3497032 Msa0231310:CDS 40.0%
!! AGTGTACTTTTTGCCATGAC+CGG + chr2_2:3497664-3497683 None:intergenic 40.0%
! CAATCTTTTTGTGCAGGTGT+TGG - chr2_2:3497776-3497795 Msa0231310:CDS 40.0%
GTGCATGAAAGCAACTTCAA+AGG + chr2_2:3497848-3497867 None:intergenic 40.0%
TCATGCACTCTTCTCCAAAT+AGG - chr2_2:3497860-3497879 Msa0231310:CDS 40.0%
! TTTTCTCTAACTCATGCGTG+AGG - chr2_2:3498631-3498650 Msa0231310:intron 40.0%
TTTCTCTAACTCATGCGTGA+GGG - chr2_2:3498632-3498651 Msa0231310:intron 40.0%
GGGGCCTAAAAAATATTGGA+GGG + chr2_2:3498992-3499011 None:intergenic 40.0%
CTGGACGCTATCATTGAAAT+GGG + chr2_2:3499184-3499203 None:intergenic 40.0%
AGAAGAGTAAGCAAAACTGG+TGG + chr2_2:3499239-3499258 None:intergenic 40.0%
! CAACACACAGTTAAAGTGTC+GGG + chr2_2:3500037-3500056 None:intergenic 40.0%
CTTGTCAACATGGTTCCTAA+TGG - chr2_2:3500165-3500184 Msa0231310:CDS 40.0%
! AACATGGTTCCTAATGGATG+TGG - chr2_2:3500171-3500190 Msa0231310:CDS 40.0%
! TAGTTGATGCCACATCCATT+AGG + chr2_2:3500183-3500202 None:intergenic 40.0%
AGTCTACCTTACTACCTCTT+AGG - chr2_2:3500250-3500269 Msa0231310:CDS 40.0%
AGCATTCCTAAGAGGTAGTA+AGG + chr2_2:3500259-3500278 None:intergenic 40.0%
GTGTCAAGCAATTCTTCACA+AGG - chr2_2:3500299-3500318 Msa0231310:intron 40.0%
! ACATCAGGTTCAGCTATTTC+TGG - chr2_2:3500415-3500434 Msa0231310:intron 40.0%
!! CATCAGGTTCAGCTATTTCT+GGG - chr2_2:3500416-3500435 Msa0231310:intron 40.0%
GTGACATACAGAAAGAAGTC+TGG + chr2_2:3500451-3500470 None:intergenic 40.0%
TCCATGTCTTTCCTTCATGA+GGG + chr2_2:3500618-3500637 None:intergenic 40.0%
ATCCATGTCTTTCCTTCATG+AGG + chr2_2:3500619-3500638 None:intergenic 40.0%
CATGAAGGAAAGACATGGAT+TGG - chr2_2:3500619-3500638 Msa0231310:intron 40.0%
GCCGAAATATATCTAATCCG+AGG + chr2_2:3500676-3500695 None:intergenic 40.0%
! AACAGTTGTCATGGTAGTGA+TGG + chr2_2:3500710-3500729 None:intergenic 40.0%
ATCACTACCATGACAACTGT+TGG - chr2_2:3500709-3500728 Msa0231310:intron 40.0%
! ACCATGACAACTGTTGGTTA+TGG - chr2_2:3500715-3500734 Msa0231310:intron 40.0%
ACCATAACCAACAGTTGTCA+TGG + chr2_2:3500719-3500738 None:intergenic 40.0%
TTCTACATGCTCTTCAACCT+TGG - chr2_2:3500781-3500800 Msa0231310:intron 40.0%
! ATCTGCTCTTTTAACCTTGG+AGG + chr2_2:3501037-3501056 None:intergenic 40.0%
! AGGATCTGCTCTTTTAACCT+TGG + chr2_2:3501040-3501059 None:intergenic 40.0%
AAGGTTAAAAGAGCAGATCC+TGG - chr2_2:3501039-3501058 Msa0231310:intron 40.0%
ATCTCAAACACATGTAAGCC+AGG + chr2_2:3501060-3501079 None:intergenic 40.0%
AGCTTATACGCAAGCGTTAT+TGG + chr2_2:3501268-3501287 None:intergenic 40.0%
GACGCATGTATTTATGCCAA+TGG - chr2_2:3501406-3501425 Msa0231310:intron 40.0%
CTAACAACTGGAGACATGTT+TGG - chr2_2:3501626-3501645 Msa0231310:intron 40.0%
!! AAGTTGGTGCACTTTGTTGT+AGG - chr2_2:3501651-3501670 Msa0231310:intron 40.0%
!! GGCTGTGAATTTGTTAACTG+TGG - chr2_2:3501964-3501983 Msa0231310:intron 40.0%
!! TCTTTTGAGTCTCCAATGTC+AGG + chr2_2:3502043-3502062 None:intergenic 40.0%
TCACTGACATATCAGATCGA+CGG - chr2_2:3502131-3502150 Msa0231310:intron 40.0%
TATCAATGTCATGTCGGTGT+TGG + chr2_2:3502196-3502215 None:intergenic 40.0%
AGCACATAGCTGCATCAAAT+GGG - chr2_2:3502389-3502408 Msa0231310:intron 40.0%
TGAATGGTGACAATGCACTA+TGG - chr2_2:3502551-3502570 Msa0231310:CDS 40.0%
AAAGAGCAGATAGCTGATAG+AGG + chr2_2:3502615-3502634 None:intergenic 40.0%
GACAGCTATCCAAATTGCTA+TGG - chr2_2:3502753-3502772 Msa0231310:intron 40.0%
TGCTATGGCAGAAAATCATG+TGG - chr2_2:3502768-3502787 Msa0231310:intron 40.0%
GTTCAGTTGCTTGTCATGAA+CGG - chr2_2:3502796-3502815 Msa0231310:intron 40.0%
ATTCTGCAGAAACGCGAAAT+CGG - chr2_2:3502874-3502893 Msa0231310:intron 40.0%
GAAGAACAGAAGCAGATTTG+GGG - chr2_2:3502958-3502977 Msa0231310:intron 40.0%
CTCTTTCTCTTCTCACTACT+GGG + chr2_2:3503032-3503051 None:intergenic 40.0%
GAAAGAGGTTTCATTGAAGC+TGG - chr2_2:3503045-3503064 Msa0231310:intron 40.0%
CGTGAAACTTAAAGGACCTA+GGG + chr2_2:3503657-3503676 None:intergenic 40.0%
ACGTGAAACTTAAAGGACCT+AGG + chr2_2:3503658-3503677 None:intergenic 40.0%
TTCAGATAGGTCTTTAACGG+AGG + chr2_2:3503797-3503816 None:intergenic 40.0%
GAAAGGGTAAGCTCAACACA+AGG + chr2_2:3496705-3496724 None:intergenic 45.0%
AAGCTCATTCTTCCACCACT+TGG - chr2_2:3496946-3496965 Msa0231310:exon 45.0%
AGGCTGGATCATATCACCAA+TGG - chr2_2:3496999-3497018 Msa0231310:CDS 45.0%
!!! CAGGTGTTGGGAGAGTTTTA+TGG - chr2_2:3497789-3497808 Msa0231310:CDS 45.0%
TTCTTCGTCGCATACGTAGA+TGG - chr2_2:3497943-3497962 Msa0231310:intron 45.0%
CTCGTGGTTAAACATAGACC+AGG + chr2_2:3498912-3498931 None:intergenic 45.0%
GGGGGCCTAAAAAATATTGG+AGG + chr2_2:3498993-3499012 None:intergenic 45.0%
ACGCTATCATTGAAATGGGC+TGG + chr2_2:3499180-3499199 None:intergenic 45.0%
GCTGGACGCTATCATTGAAA+TGG + chr2_2:3499185-3499204 None:intergenic 45.0%
GAGACAGGTACTTGTCAACA+TGG - chr2_2:3500155-3500174 Msa0231310:CDS 45.0%
GCTGATATGTACCCTCATGA+AGG - chr2_2:3500604-3500623 Msa0231310:intron 45.0%
ACCCTCATGAAGGAAAGACA+TGG - chr2_2:3500614-3500633 Msa0231310:intron 45.0%
TCTTCATGCTGTCAACACCA+TGG - chr2_2:3500741-3500760 Msa0231310:intron 45.0%
TCAAGTAAGCAGTTAGGCCA+AGG + chr2_2:3500801-3500820 None:intergenic 45.0%
GGCCTAACTGCTTACTTGAT+TGG - chr2_2:3500802-3500821 Msa0231310:intron 45.0%
GGAGACATGTTTGGAGAAGT+TGG - chr2_2:3501635-3501654 Msa0231310:intron 45.0%
CAGAAGCTGTGTTAGAGTCT+TGG + chr2_2:3501699-3501718 None:intergenic 45.0%
CAAGACAGTAACCAACCTGA+AGG + chr2_2:3501796-3501815 None:intergenic 45.0%
GCAGCATTTCAAGCAGCTTA+AGG - chr2_2:3501886-3501905 Msa0231310:intron 45.0%
TTTGTTAACTGTGGCCAGCA+CGG - chr2_2:3501973-3501992 Msa0231310:intron 45.0%
TATCAGATCGACGGTGTGTT+CGG - chr2_2:3502140-3502159 Msa0231310:intron 45.0%
!! TCTACGCTTAGTCTTGTGTC+CGG - chr2_2:3502264-3502283 Msa0231310:intron 45.0%
CAGCACATAGCTGCATCAAA+TGG - chr2_2:3502388-3502407 Msa0231310:intron 45.0%
CTTTCTGATCCATACACAGC+AGG - chr2_2:3502631-3502650 Msa0231310:CDS 45.0%
GGCAGAAAATCATGTGGACA+TGG - chr2_2:3502774-3502793 Msa0231310:intron 45.0%
CCTCTTTCTCTTCTCACTAC+TGG + chr2_2:3503033-3503052 None:intergenic 45.0%
CCAGTAGTGAGAAGAGAAAG+AGG - chr2_2:3503030-3503049 Msa0231310:intron 45.0%
!! AAAGGACCTAGGGAGGTATT+TGG + chr2_2:3503647-3503666 None:intergenic 45.0%
GAAACTTAAAGGACCTAGGG+AGG + chr2_2:3503654-3503673 None:intergenic 45.0%
ACGTGAAACTTAAAGGACCC+AGG - chr2_2:3503879-3503898 Msa0231310:five_prime_UTR 45.0%
CGTGAAACTTAAAGGACCCA+GGG - chr2_2:3503880-3503899 Msa0231310:five_prime_UTR 45.0%
! TTTTGGCCAAATACCTCCCT+GGG + chr2_2:3503899-3503918 None:intergenic 45.0%
!! TTTTTGGCCAAATACCTCCC+TGG + chr2_2:3503900-3503919 None:intergenic 45.0%
!! ATCTATTTATAATTATAATT+AGG + chr2_2:3498876-3498895 None:intergenic 5.0%
!!! AATTAAATAATATGTATTTT+TGG + chr2_2:3499807-3499826 None:intergenic 5.0%
!!! TTGTTTTATAAAAAAATAAA+GGG - chr2_2:3503621-3503640 Msa0231310:CDS 5.0%
TGTCTTTCTCAAGCCTGCCA+AGG + chr2_2:3500398-3500417 None:intergenic 50.0%
GCAGGCTTGAGAAAGACATC+AGG - chr2_2:3500400-3500419 Msa0231310:intron 50.0%
!! GGGCTTGTCTCTCTGAAGTT+TGG + chr2_2:3500655-3500674 None:intergenic 50.0%
ACTTCAGAGAGACAAGCCCT+CGG - chr2_2:3500656-3500675 Msa0231310:intron 50.0%
! ACCTTGGAGGCAACCGATTT+CGG + chr2_2:3501024-3501043 None:intergenic 50.0%
GGAGGAAGACGATCCTAACA+TGG - chr2_2:3501943-3501962 Msa0231310:intron 50.0%
TTGTTAACTGTGGCCAGCAC+GGG - chr2_2:3501974-3501993 Msa0231310:intron 50.0%
! GGAGCTTCTAAGAGCTGGTT+TGG - chr2_2:3502015-3502034 Msa0231310:intron 50.0%
!! GCTGGTTTGGATCCTGACAT+TGG - chr2_2:3502028-3502047 Msa0231310:intron 50.0%
! TCGGTGTCCTACACATGTGA+CGG - chr2_2:3502159-3502178 Msa0231310:intron 50.0%
TCACACACCGTCACATGTGT+AGG + chr2_2:3502169-3502188 None:intergenic 50.0%
CTTGTGTCCGGTGTTTGTGT+CGG - chr2_2:3502276-3502295 Msa0231310:intron 50.0%
AGGAGATTGCCTGCTGTGTA+TGG + chr2_2:3502643-3502662 None:intergenic 50.0%
AAAGGGCCAAATACCTCCCT+AGG - chr2_2:3503638-3503657 Msa0231310:exon 50.0%
GAAACTTAAAGGACCCAGGG+AGG - chr2_2:3503883-3503902 Msa0231310:five_prime_UTR 50.0%
!! AAAGGACCCAGGGAGGTATT+TGG - chr2_2:3503890-3503909 Msa0231310:five_prime_UTR 50.0%
CTGGCCCATATCTAGTCTCG+TGG + chr2_2:3498928-3498947 None:intergenic 55.0%
CACGAGACTAGATATGGGCC+AGG - chr2_2:3498926-3498945 Msa0231310:CDS 55.0%
TGAAGGAACTCGTCGCACCA+TGG - chr2_2:3500846-3500865 Msa0231310:intron 55.0%
AAAAGCAGCATTGCCCGTGC+TGG + chr2_2:3501990-3502009 None:intergenic 55.0%
!!! GGGCAATGCTGCTTTTCTCG+AGG - chr2_2:3501994-3502013 Msa0231310:intron 55.0%
! CTCGAGGAGCTTCTAAGAGC+TGG - chr2_2:3502010-3502029 Msa0231310:intron 55.0%
ACTGCCACCGACACAAACAC+CGG + chr2_2:3502286-3502305 None:intergenic 55.0%
GCCGAAATCGGTTGCCTCCA+AGG - chr2_2:3501020-3501039 Msa0231310:intron 60.0%
GTGTCCGGTGTTTGTGTCGG+TGG - chr2_2:3502279-3502298 Msa0231310:intron 60.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 3496502 3503972 3496502 ID=Msa0231310;Name=Msa0231310
chr2_2 mRNA 3496502 3503972 3496502 ID=Msa0231310-mRNA-1;Parent=Msa0231310;Name=Msa0231310-mRNA-1;_AED=0.08;_eAED=0.08;_QI=321|1|1|1|0.90|0.83|12|179|827
chr2_2 exon 3496502 3496555 3496502 ID=Msa0231310-mRNA-1:exon:1456;Parent=Msa0231310-mRNA-1
chr2_2 exon 3496839 3497091 3496839 ID=Msa0231310-mRNA-1:exon:1455;Parent=Msa0231310-mRNA-1
chr2_2 exon 3497357 3497926 3497357 ID=Msa0231310-mRNA-1:exon:1454;Parent=Msa0231310-mRNA-1
chr2_2 exon 3498008 3498083 3498008 ID=Msa0231310-mRNA-1:exon:1453;Parent=Msa0231310-mRNA-1
chr2_2 exon 3498399 3498584 3498399 ID=Msa0231310-mRNA-1:exon:1452;Parent=Msa0231310-mRNA-1
chr2_2 exon 3498675 3498992 3498675 ID=Msa0231310-mRNA-1:exon:1451;Parent=Msa0231310-mRNA-1
chr2_2 exon 3499249 3499488 3499249 ID=Msa0231310-mRNA-1:exon:1450;Parent=Msa0231310-mRNA-1
chr2_2 exon 3499601 3499918 3499601 ID=Msa0231310-mRNA-1:exon:1449;Parent=Msa0231310-mRNA-1
chr2_2 exon 3500013 3500070 3500013 ID=Msa0231310-mRNA-1:exon:1448;Parent=Msa0231310-mRNA-1
chr2_2 exon 3500154 3500312 3500154 ID=Msa0231310-mRNA-1:exon:1447;Parent=Msa0231310-mRNA-1
chr2_2 exon 3502464 3502682 3502464 ID=Msa0231310-mRNA-1:exon:1446;Parent=Msa0231310-mRNA-1
chr2_2 exon 3503440 3503972 3503440 ID=Msa0231310-mRNA-1:exon:1445;Parent=Msa0231310-mRNA-1
chr2_2 five_prime_UTR 3503652 3503972 3503652 ID=Msa0231310-mRNA-1:five_prime_utr;Parent=Msa0231310-mRNA-1
chr2_2 CDS 3503440 3503651 3503440 ID=Msa0231310-mRNA-1:cds;Parent=Msa0231310-mRNA-1
chr2_2 CDS 3502464 3502682 3502464 ID=Msa0231310-mRNA-1:cds;Parent=Msa0231310-mRNA-1
chr2_2 CDS 3500154 3500312 3500154 ID=Msa0231310-mRNA-1:cds;Parent=Msa0231310-mRNA-1
chr2_2 CDS 3500013 3500070 3500013 ID=Msa0231310-mRNA-1:cds;Parent=Msa0231310-mRNA-1
chr2_2 CDS 3499601 3499918 3499601 ID=Msa0231310-mRNA-1:cds;Parent=Msa0231310-mRNA-1
chr2_2 CDS 3499249 3499488 3499249 ID=Msa0231310-mRNA-1:cds;Parent=Msa0231310-mRNA-1
chr2_2 CDS 3498675 3498992 3498675 ID=Msa0231310-mRNA-1:cds;Parent=Msa0231310-mRNA-1
chr2_2 CDS 3498399 3498584 3498399 ID=Msa0231310-mRNA-1:cds;Parent=Msa0231310-mRNA-1
chr2_2 CDS 3498008 3498083 3498008 ID=Msa0231310-mRNA-1:cds;Parent=Msa0231310-mRNA-1
chr2_2 CDS 3497357 3497926 3497357 ID=Msa0231310-mRNA-1:cds;Parent=Msa0231310-mRNA-1
chr2_2 CDS 3496964 3497091 3496964 ID=Msa0231310-mRNA-1:cds;Parent=Msa0231310-mRNA-1
chr2_2 three_prime_UTR 3496839 3496963 3496839 ID=Msa0231310-mRNA-1:three_prime_utr;Parent=Msa0231310-mRNA-1
chr2_2 three_prime_UTR 3496502 3496555 3496502 ID=Msa0231310-mRNA-1:three_prime_utr;Parent=Msa0231310-mRNA-1
Gene Sequence

>Msa0231310

ATGGAGAGCAATTTCAGTTCATATAATCCTCATGACTTAGACTCTAGCATGAAGAGAAAGCACCATGATGTTAAAGAAGATTATTATACATCATCTTCATCTTTCAATCTAAGGAATGTTTCAAAGCTCATTCTTCCACCACTTGGTGTTTCAAAACAGAATTCAGTTTGCTCAAAAGGCTGGATCATATCACCAATGGATTCTAGATACAGGTGTTGGGAGAGTTTTATGGTTATTTTGGTAGCTTATTCTGCATGGGTTTATCCCTTTGAAGTTGCTTTCATGCACTCTTCTCCAAATAGGAAACTATATATTGTGGACAATATTGTTGATCTTTTCTTCGCTGTTGATATTGTTTTGACATTCTTCGTCGCATACGTAGATGGAACAACTCATCTACTTGTCAGAGATTCCAAAAAAATTGCTGTCAGGTACTTGTCAACATGGTTCCTAATGGATGTGGCATCAACTATACCATATGAAGCAATAGGCTACTTTTTAACTGGCAAGCACAAATTGAGTCTACCTTACTACCTCTTAGGAATGCTCAGATTTTGGAGAATTAGACGTGTCAAGCAATTCTTCACAAGGCTTGAGAAAGACATCAGGTTCAGCTATTTCTGGGTCAGATGTGCCAGACTTCTTTCTGTAACACTATTTTCAGTTCATTGTGCTGGGTGCCTCTATTACATGCTAGCTGATATGTACCCTCATGAAGGAAAGACATGGATTGGAGCTGTGATTCCAAACTTCAGAGAGACAAGCCCTCGGATTAGATATATTTCGGCTATTTATTGGTCCATCACTACCATGACAACTGTTGGTTATGGTGATCTTCATGCTGTCAACACCATGGAAATGATTTTCATTATTTTCTACATGCTCTTCAACCTTGGCCTAACTGCTTACTTGATTGGTAACATGACAAATCTTGTTGTTGAAGGAACTCGTCGCACCATGGAATTTAGAAACAGCATTGAAGCAGCATCAAATTTTGTGTGCCGAAATCGGTTGCCTCCAAGGTTAAAAGAGCAGATCCTGGCTTACATGTGTTTGAGATTTAAGGCAGAGAGCTTGAATCAGCATCAGCTAATTGAACAGCTACCAAAGTCAATTTGCAAAGGCATTTGCCAGCATTTGTTTTTTCCAACTGTAGAGAAAGTCTATCTCTTCAAAGGCGTCTCAAAAGAAATCCTTTTGTCCCTAGTTGCAAAAATGAAGGCAGAGTACATACCACCTAAAGAGGATGTAATCATGCAAAATGAATCACCAGATGATGTTTATATTATAGTGTCAGGAGAAGTGGAGATTATTGATAGTGTTATAGAGAAAGAGAGAATTTTAGGCACTCTAACAACTGGAGACATGTTTGGAGAAGTTGGTGCACTTTGTTGTAGGCCTCAGAGTTTTACATACAGAACCAAGACTCTAACACAGCTTCTGAAGCTGAAAACCAGTGATCTTATAGAAGCAATGCAGATTAAAAAAGAAGACAATATACTAATACTCAAAAATTTCCTTCAGCATTTCAAGCAGCTTAAGGATTTGAGTATCAAAGATTTAATGGTGGAAAATGTGGAGGAAGACGATCCTAACATGGCTGTGAATTTGTTAACTGTGGCCAGCACGGGCAATGCTGCTTTTCTCGAGGAGCTTCTAAGAGCTGGTTTGGATCCTGACATTGGAGACTCAAAAGAAAAAACTCCATTGCACATAGCTGCATCAAATGGGCATGAAGAGTGTGTTAAAGTCTTGCTTAAGCATACATGCAACATACATATAAAAGATATGAATGGTGACAATGCACTATGGTATGCTATAGCATCAAAACATCACTCAATATTCAGGATCCTCTATCAGCTATCTGCTCTTTCTGATCCATACACAGCAGGCAATCTCCTATGTACAGCAGCAAAAAGAAATGATATAACAGTGATGCATGAACTTTTAAAGCAAGGATTAAACATTGACTCAAAAGATCGACATGGCATGACAGCTATCCAAATTGCTATGGCAGAAAATCATGTGGACATGGTTCAGTTGCTTGTCATGAACGGCGCAGATGTTACTGATGTACATGTTCATGAATTTTCTGCATCCATCTTAAATGAAATTCTGCAGAAACGCGAAATCGGACATCTAATTAATGTGAGTGAGGCCATGCCTAGTGAGTATGTATTAAAGGTGCAAAGTCAAGAAGAACAGAAGCAGATTTGGGGAAGATATAATGGACTAGATTGTCCAAGAGTAAGCATATATAGAGGTCACCCAGTAGTGAGAAGAGAAAGAGGTTTCATTGAAGCTGGAAAGTTAATAAGGTTGCCTGATTCATTAGAGAAGCTCAAAATTATTGCAGGTGAAAAATTTGGGTTTGATGCAAAAGATACAATGGTGACAAATGAAGAAGGAGCAGAAATAGATTGTATTGATGTGATCAGAGATAATGACAAACTTTTTTTTGTTGAAGAGGCTATTGATGCATAA
Protein sequence

>Msa0231310

MESNFSSYNPHDLDSSMKRKHHDVKEDYYTSSSSFNLRNVSKLILPPLGVSKQNSVCSKGWIISPMDSRYRCWESFMVILVAYSAWVYPFEVAFMHSSPNRKLYIVDNIVDLFFAVDIVLTFFVAYVDGTTHLLVRDSKKIAVRYLSTWFLMDVASTIPYEAIGYFLTGKHKLSLPYYLLGMLRFWRIRRVKQFFTRLEKDIRFSYFWVRCARLLSVTLFSVHCAGCLYYMLADMYPHEGKTWIGAVIPNFRETSPRIRYISAIYWSITTMTTVGYGDLHAVNTMEMIFIIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIEAASNFVCRNRLPPRLKEQILAYMCLRFKAESLNQHQLIEQLPKSICKGICQHLFFPTVEKVYLFKGVSKEILLSLVAKMKAEYIPPKEDVIMQNESPDDVYIIVSGEVEIIDSVIEKERILGTLTTGDMFGEVGALCCRPQSFTYRTKTLTQLLKLKTSDLIEAMQIKKEDNILILKNFLQHFKQLKDLSIKDLMVENVEEDDPNMAVNLLTVASTGNAAFLEELLRAGLDPDIGDSKEKTPLHIAASNGHEECVKVLLKHTCNIHIKDMNGDNALWYAIASKHHSIFRILYQLSALSDPYTAGNLLCTAAKRNDITVMHELLKQGLNIDSKDRHGMTAIQIAMAENHVDMVQLLVMNGADVTDVHVHEFSASILNEILQKREIGHLINVSEAMPSEYVLKVQSQEEQKQIWGRYNGLDCPRVSIYRGHPVVRRERGFIEAGKLIRLPDSLEKLKIIAGEKFGFDAKDTMVTNEEGAEIDCIDVIRDNDKLFFVEEAIDA*