AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0829460

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0829460 MtrunA17_Chr2g0303921 76.608 171 19 2 1 164 110 266 4.87e-71 221
Msa0829460 MtrunA17_Chr2g0328761 83.333 144 16 2 149 288 368 507 8.13e-67 216
Msa0829460 MtrunA17_Chr3g0088471 56.643 143 54 2 149 287 397 535 1.47e-47 166
Msa0829460 MtrunA17_Chr8g0352171 56.349 126 51 1 167 288 263 388 2.22e-43 152
Msa0829460 MtrunA17_Chr8g0352151 48.252 143 66 2 149 287 413 551 5.68e-40 146
Msa0829460 MtrunA17_Chr5g0448591 40.945 127 71 1 165 287 423 549 8.36e-26 106
Msa0829460 MtrunA17_Chr7g0243421 37.162 148 86 2 146 286 123 270 2.13e-22 94.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0829460 AT1G51340.1 63.194 144 45 2 149 288 370 509 3.17e-53 181
Msa0829460 AT1G51340.3 63.194 144 45 2 149 288 376 515 4.91e-53 181
Msa0829460 AT1G51340.5 63.194 144 45 2 149 288 376 515 4.91e-53 181
Msa0829460 AT1G51340.2 63.194 144 45 2 149 288 376 515 4.91e-53 181
Msa0829460 AT3G08040.2 54.545 143 57 2 149 287 276 414 2.12e-44 156
Msa0829460 AT3G08040.1 54.545 143 57 2 149 287 380 518 8.49e-44 156
Msa0829460 AT4G38380.2 42.969 128 69 1 165 288 427 554 1.15e-25 106
Msa0829460 AT4G38380.1 42.969 128 69 1 165 288 427 554 1.15e-25 106
Msa0829460 AT4G38380.5 42.969 128 69 1 165 288 417 544 2.33e-25 105
Msa0829460 AT4G38380.3 42.969 128 69 1 165 288 355 482 8.40e-25 103
Msa0829460 AT4G38380.4 42.969 128 69 1 165 288 317 444 8.79e-25 103
Msa0829460 AT2G38330.1 42.188 128 70 1 165 288 388 515 5.33e-24 101

Find 84 sgRNAs with CRISPR-Local

Find 284 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGGTGGATTCATTGGAATT+TGG 0.178835 5_4:+2395912 Msa0829460:CDS
TATTTAATGGTGTCAACTTT+GGG 0.258127 5_4:+2395421 Msa0829460:CDS
TGTTTGGCCTTTGTATTTAA+TGG 0.267368 5_4:+2395408 Msa0829460:CDS
AAGCAGATGGGCATGGTTCT+TGG 0.282921 5_4:+2395164 Msa0829460:CDS
AATTCTGCAACTGAATTATA+AGG 0.291751 5_4:-2394500 None:intergenic
TTGGCACTTGCATTCATTCT+TGG 0.305585 5_4:+2395188 Msa0829460:CDS
TGCAGAAGTTTCTGATGATT+TGG 0.309695 5_4:+2394559 Msa0829460:CDS
TCTACACCCTTAGTAGATTC+AGG 0.310531 5_4:-2394809 None:intergenic
GATTCATAACTATTGTTTGC+TGG 0.341036 5_4:+2396271 Msa0829460:three_prime_UTR
ATACAAAGGCCAAACAGTTC+AGG 0.350521 5_4:-2395401 None:intergenic
TGGTGGATTCATTGGAATTT+GGG 0.353696 5_4:+2395913 Msa0829460:CDS
GTATTTAATGGTGTCAACTT+TGG 0.358346 5_4:+2395420 Msa0829460:CDS
TCAACCGCTGGTGGATTCAT+TGG 0.366302 5_4:+2395905 Msa0829460:CDS
GCAAGATCAGTTTCCGCAAC+TGG 0.367595 5_4:-2394659 None:intergenic
GATTCCATCTTAGTGAAATC+TGG 0.369687 5_4:-2396197 None:intergenic
CCCGTCAAATTCCCTAGTCT+CGG 0.375066 5_4:-2394753 None:intergenic
TGCAGAAAGCTCTGAAAATC+AGG 0.376100 5_4:+2394853 Msa0829460:CDS
CTTGCATTCATTCTTGGAAC+AGG 0.384448 5_4:+2395194 Msa0829460:CDS
TATGAAGTTTGAGGAGCGTT+TGG 0.399210 5_4:+2394373 None:intergenic
TACTCAACCCCTGAACTGTT+TGG 0.403896 5_4:+2395392 Msa0829460:CDS
TCCTATTCCTGAATCTACTA+AGG 0.416258 5_4:+2394802 Msa0829460:CDS
AGTTTCTGATGATTTGGTTA+AGG 0.419545 5_4:+2394565 Msa0829460:CDS
CTCTCATAATTCAAATCCTT+CGG 0.430722 5_4:-2394410 None:intergenic
TTCAGAGCTTTCTGCAGCAT+TGG 0.431912 5_4:-2394846 None:intergenic
TATTGATGCAGGATTGGAAC+TGG 0.437676 5_4:+2396094 Msa0829460:intron
TGCAGGATTGGAACTGGATC+AGG 0.440539 5_4:+2396100 Msa0829460:intron
ATGAGTCTAAGAGCATTTGC+TGG 0.445196 5_4:+2395953 Msa0829460:CDS
CCCTTAGTAGATTCAGGAAT+AGG 0.447048 5_4:-2394803 None:intergenic
CTTGGAACAGGATTGCACTT+TGG 0.450496 5_4:+2395206 Msa0829460:CDS
CAGGACCATGGGAATTCCTT+AGG 0.451204 5_4:+2396119 Msa0829460:CDS
TACAAAGGCCAAACAGTTCA+GGG 0.452053 5_4:-2395400 None:intergenic
TCAAATGATGTGATTGAAAC+CGG 0.452898 5_4:+2394452 Msa0829460:CDS
TCAATAACAATTAGCTCCTA+AGG 0.461793 5_4:-2396135 None:intergenic
GATATTCTAACAACCTCATC+AGG 0.474364 5_4:-2394716 None:intergenic
TTGCTTAATATGAATATGAC+AGG 0.476496 5_4:+2396339 Msa0829460:three_prime_UTR
CCGTCAAATTCCCTAGTCTC+GGG 0.482097 5_4:-2394752 None:intergenic
GGGTCCAGATTTCACTAAGA+TGG 0.482457 5_4:+2396193 Msa0829460:three_prime_UTR
TGATATACTAGAGAAATCAT+TGG 0.482953 5_4:+2394631 Msa0829460:intron
CCCGAGACTAGGGAATTTGA+CGG 0.485416 5_4:+2394752 Msa0829460:CDS
GATGGGCATGGTTCTTGGAT+TGG 0.490847 5_4:+2395169 Msa0829460:CDS
TTAGTGGGTTGGACAGAAGC+TGG 0.491375 5_4:+2396362 Msa0829460:three_prime_UTR
TTCACTAAGATGGAATCATT+CGG 0.491585 5_4:+2396203 Msa0829460:three_prime_UTR
TGTTAGAATATCGAGTTTGA+AGG 0.502677 5_4:+2394727 Msa0829460:CDS
TCCCAACTCTAATGAGGTGC+AGG 0.503744 5_4:-2395259 None:intergenic
TATGAATATGACAGGTTAGT+GGG 0.511045 5_4:+2396347 Msa0829460:three_prime_UTR
GATATACTAGAGAAATCATT+GGG 0.514095 5_4:+2394632 Msa0829460:intron
GTTTGAAGGAACCCGAGACT+AGG 0.516717 5_4:+2394741 Msa0829460:CDS
AGAATGGGGTATGAAGTTTG+AGG 0.531269 5_4:+2394364 None:intergenic
TTCTGCTGATTCAGTAAAGG+AGG 0.540629 5_4:+2394523 Msa0829460:CDS
ATATGAATATGACAGGTTAG+TGG 0.543159 5_4:+2396346 Msa0829460:three_prime_UTR
TTTGAAGGAACCCGAGACTA+GGG 0.543161 5_4:+2394742 Msa0829460:CDS
GAGCATTTGCTGGCTTCTTG+AGG 0.554417 5_4:+2395963 Msa0829460:CDS
ATCATTGGGCTCTCCAGTTG+CGG 0.561350 5_4:+2394646 Msa0829460:CDS
GTAGATGGTTATAAAGCAGA+TGG 0.564031 5_4:+2395151 Msa0829460:intron
GGAGAAAATTGACTCTCCGA+AGG 0.564727 5_4:+2394394 Msa0829460:CDS
TGAAGAATTTGCTGACACTC+TGG 0.569769 5_4:+2396232 Msa0829460:three_prime_UTR
TGCATATTCAGCCTTCTCCA+TGG 0.574962 5_4:+2395455 Msa0829460:CDS
AATATGACAGGTTAGTGGGT+TGG 0.579569 5_4:+2396351 Msa0829460:three_prime_UTR
TTGGAACTGGATCAGGACCA+TGG 0.582445 5_4:+2396107 Msa0829460:CDS
ATGAGTTTAGCAGCCACACC+AGG 0.586123 5_4:-2396394 None:intergenic
CCTATTCCTGAATCTACTAA+GGG 0.586895 5_4:+2394803 Msa0829460:CDS
GCAGTGAGTGTTGTGATGAC+AGG 0.590503 5_4:+2396167 Msa0829460:three_prime_UTR
GGTTATAAAGCAGATGGGCA+TGG 0.591391 5_4:+2395157 Msa0829460:CDS
GAAGTTGCATACCATGGAGA+AGG 0.592624 5_4:-2395466 None:intergenic
ATTTAATGGTGTCAACTTTG+GGG 0.595581 5_4:+2395422 Msa0829460:CDS
TGGAACTGGATCAGGACCAT+GGG 0.597595 5_4:+2396108 Msa0829460:CDS
CCGAGACTAGGGAATTTGAC+GGG 0.599319 5_4:+2394753 Msa0829460:CDS
TCTGCTGATTCAGTAAAGGA+GGG 0.600137 5_4:+2394524 Msa0829460:CDS
TCGGGATCCCAACTCTAATG+AGG 0.602731 5_4:-2395265 None:intergenic
AGTACAAGTCTTACCTGATG+AGG 0.612891 5_4:+2394703 Msa0829460:CDS
GTTGACACCATTAAATACAA+AGG 0.614677 5_4:-2395415 None:intergenic
TAGATGGTTATAAAGCAGAT+GGG 0.638630 5_4:+2395152 Msa0829460:intron
GTCTCTGAGATGCAAAGCGG+AGG 0.647789 5_4:+2394599 Msa0829460:CDS
TATGAGAGTCGAAAGAACAA+TGG 0.656718 5_4:+2394425 Msa0829460:CDS
AGTGTTGTGATGACAGGAGT+GGG 0.658768 5_4:+2396173 Msa0829460:three_prime_UTR
TAGCTCCTAAGGAATTCCCA+TGG 0.677278 5_4:-2396124 None:intergenic
AGTTTAGCAGCCACACCAGG+TGG 0.683789 5_4:-2396391 None:intergenic
GCTTTGCATCTCAGAGACAG+AGG 0.693404 5_4:-2394594 None:intergenic
GAGTGTTGTGATGACAGGAG+TGG 0.694439 5_4:+2396172 Msa0829460:three_prime_UTR
GAGAGTCGAAAGAACAATGG+CGG 0.699704 5_4:+2394428 Msa0829460:CDS
ACAAAGGCCAAACAGTTCAG+GGG 0.700393 5_4:-2395399 None:intergenic
TCTTGCTGTGAAGAGAAGTG+AGG 0.715533 5_4:+2394676 Msa0829460:CDS
AATTCCAATGAATCCACCAG+CGG 0.727441 5_4:-2395909 None:intergenic
TCTGTCTCTGAGATGCAAAG+CGG 0.729026 5_4:+2394596 Msa0829460:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GGGATTTATATATTTTAACA+TGG + chr5_4:2395109-2395128 Msa0829460:intron 20.0%
!!! TTTCAATGATTCTTTAAGAT+TGG - chr5_4:2395563-2395582 None:intergenic 20.0%
!!! AATTTTCTTCAATTTTTGAC+TGG + chr5_4:2395683-2395702 Msa0829460:intron 20.0%
!! AGTTAAGAATATACAATTAG+TGG + chr5_4:2395808-2395827 Msa0829460:intron 20.0%
!!! GGGATTTATATATTTTAACA+TGG + chr5_4:2395109-2395128 Msa0829460:intron 20.0%
!!! TTTCAATGATTCTTTAAGAT+TGG - chr5_4:2395563-2395582 None:intergenic 20.0%
!!! AATTTTCTTCAATTTTTGAC+TGG + chr5_4:2395683-2395702 Msa0829460:intron 20.0%
!! AGTTAAGAATATACAATTAG+TGG + chr5_4:2395808-2395827 Msa0829460:intron 20.0%
! AATTCTGCAACTGAATTATA+AGG - chr5_4:2394503-2394522 None:intergenic 25.0%
! TGATATACTAGAGAAATCAT+TGG + chr5_4:2394631-2394650 Msa0829460:intron 25.0%
! GATATACTAGAGAAATCATT+GGG + chr5_4:2394632-2394651 Msa0829460:intron 25.0%
!! TAGTAGATAAATTCAGGTTA+GGG + chr5_4:2395089-2395108 Msa0829460:intron 25.0%
!! TTTTATATGTGATGTGTAGA+TGG + chr5_4:2395136-2395155 Msa0829460:intron 25.0%
! TTTGAACGCGAATAAATTAT+CGG - chr5_4:2395287-2395306 None:intergenic 25.0%
!! TATTTAATGGTGTCAACTTT+GGG + chr5_4:2395421-2395440 Msa0829460:CDS 25.0%
! ATTAAAATATAGACTCACCA+TGG - chr5_4:2395535-2395554 None:intergenic 25.0%
! AATTAAATGTAACCACATGT+CGG - chr5_4:2395667-2395686 None:intergenic 25.0%
! TTAGTGGCATTATTTCATTA+TGG + chr5_4:2395824-2395843 Msa0829460:intron 25.0%
! TTATGGCATTCTTAATTCTT+AGG + chr5_4:2395841-2395860 Msa0829460:intron 25.0%
! TTGCTTAATATGAATATGAC+AGG + chr5_4:2396339-2396358 Msa0829460:three_prime_UTR 25.0%
! AATTCTGCAACTGAATTATA+AGG - chr5_4:2394503-2394522 None:intergenic 25.0%
! TGATATACTAGAGAAATCAT+TGG + chr5_4:2394631-2394650 Msa0829460:intron 25.0%
! GATATACTAGAGAAATCATT+GGG + chr5_4:2394632-2394651 Msa0829460:intron 25.0%
!! TAGTAGATAAATTCAGGTTA+GGG + chr5_4:2395089-2395108 Msa0829460:intron 25.0%
!! TTTTATATGTGATGTGTAGA+TGG + chr5_4:2395136-2395155 Msa0829460:intron 25.0%
! TTTGAACGCGAATAAATTAT+CGG - chr5_4:2395287-2395306 None:intergenic 25.0%
!! TATTTAATGGTGTCAACTTT+GGG + chr5_4:2395421-2395440 Msa0829460:CDS 25.0%
! ATTAAAATATAGACTCACCA+TGG - chr5_4:2395535-2395554 None:intergenic 25.0%
! AATTAAATGTAACCACATGT+CGG - chr5_4:2395667-2395686 None:intergenic 25.0%
! TTAGTGGCATTATTTCATTA+TGG + chr5_4:2395824-2395843 Msa0829460:intron 25.0%
! TTATGGCATTCTTAATTCTT+AGG + chr5_4:2395841-2395860 Msa0829460:intron 25.0%
! TTGCTTAATATGAATATGAC+AGG + chr5_4:2396339-2396358 Msa0829460:three_prime_UTR 25.0%
CTCTCATAATTCAAATCCTT+CGG - chr5_4:2394413-2394432 None:intergenic 30.0%
TCAAATGATGTGATTGAAAC+CGG + chr5_4:2394452-2394471 Msa0829460:CDS 30.0%
!!! ATTTTCTGCTGATTCAGTAA+AGG + chr5_4:2394520-2394539 Msa0829460:CDS 30.0%
!! AGTTTCTGATGATTTGGTTA+AGG + chr5_4:2394565-2394584 Msa0829460:CDS 30.0%
TGTTAGAATATCGAGTTTGA+AGG + chr5_4:2394727-2394746 Msa0829460:CDS 30.0%
! CTAGTAGATAAATTCAGGTT+AGG + chr5_4:2395088-2395107 Msa0829460:intron 30.0%
TAGATGGTTATAAAGCAGAT+GGG + chr5_4:2395152-2395171 Msa0829460:intron 30.0%
TTGAACGCGAATAAATTATC+GGG - chr5_4:2395286-2395305 None:intergenic 30.0%
TTCGCGTTCAAATTTAGAAA+AGG + chr5_4:2395295-2395314 Msa0829460:intron 30.0%
! TGTTTGGCCTTTGTATTTAA+TGG + chr5_4:2395408-2395427 Msa0829460:CDS 30.0%
GTTGACACCATTAAATACAA+AGG - chr5_4:2395418-2395437 None:intergenic 30.0%
! GTATTTAATGGTGTCAACTT+TGG + chr5_4:2395420-2395439 Msa0829460:CDS 30.0%
! ATTTAATGGTGTCAACTTTG+GGG + chr5_4:2395422-2395441 Msa0829460:CDS 30.0%
GATCAAAGCAGATTAAAACA+TGG - chr5_4:2395494-2395513 None:intergenic 30.0%
AAAACATTGTAGCAAAGGTT+TGG - chr5_4:2395765-2395784 None:intergenic 30.0%
GAAACAAAACATTGTAGCAA+AGG - chr5_4:2395770-2395789 None:intergenic 30.0%
TCAATGAACTATATTGATGC+AGG + chr5_4:2396083-2396102 Msa0829460:intron 30.0%
TCAATAACAATTAGCTCCTA+AGG - chr5_4:2396138-2396157 None:intergenic 30.0%
TTCACTAAGATGGAATCATT+CGG + chr5_4:2396203-2396222 Msa0829460:three_prime_UTR 30.0%
GATTCATAACTATTGTTTGC+TGG + chr5_4:2396271-2396290 Msa0829460:three_prime_UTR 30.0%
ATATGAATATGACAGGTTAG+TGG + chr5_4:2396346-2396365 Msa0829460:three_prime_UTR 30.0%
TATGAATATGACAGGTTAGT+GGG + chr5_4:2396347-2396366 Msa0829460:three_prime_UTR 30.0%
CTCTCATAATTCAAATCCTT+CGG - chr5_4:2394413-2394432 None:intergenic 30.0%
TCAAATGATGTGATTGAAAC+CGG + chr5_4:2394452-2394471 Msa0829460:CDS 30.0%
!!! ATTTTCTGCTGATTCAGTAA+AGG + chr5_4:2394520-2394539 Msa0829460:CDS 30.0%
!! AGTTTCTGATGATTTGGTTA+AGG + chr5_4:2394565-2394584 Msa0829460:CDS 30.0%
TGTTAGAATATCGAGTTTGA+AGG + chr5_4:2394727-2394746 Msa0829460:CDS 30.0%
! CTAGTAGATAAATTCAGGTT+AGG + chr5_4:2395088-2395107 Msa0829460:intron 30.0%
TAGATGGTTATAAAGCAGAT+GGG + chr5_4:2395152-2395171 Msa0829460:intron 30.0%
TTGAACGCGAATAAATTATC+GGG - chr5_4:2395286-2395305 None:intergenic 30.0%
TTCGCGTTCAAATTTAGAAA+AGG + chr5_4:2395295-2395314 Msa0829460:intron 30.0%
! TGTTTGGCCTTTGTATTTAA+TGG + chr5_4:2395408-2395427 Msa0829460:CDS 30.0%
GTTGACACCATTAAATACAA+AGG - chr5_4:2395418-2395437 None:intergenic 30.0%
! GTATTTAATGGTGTCAACTT+TGG + chr5_4:2395420-2395439 Msa0829460:CDS 30.0%
! ATTTAATGGTGTCAACTTTG+GGG + chr5_4:2395422-2395441 Msa0829460:CDS 30.0%
GATCAAAGCAGATTAAAACA+TGG - chr5_4:2395494-2395513 None:intergenic 30.0%
AAAACATTGTAGCAAAGGTT+TGG - chr5_4:2395765-2395784 None:intergenic 30.0%
GAAACAAAACATTGTAGCAA+AGG - chr5_4:2395770-2395789 None:intergenic 30.0%
TCAATGAACTATATTGATGC+AGG + chr5_4:2396083-2396102 Msa0829460:intron 30.0%
TCAATAACAATTAGCTCCTA+AGG - chr5_4:2396138-2396157 None:intergenic 30.0%
TTCACTAAGATGGAATCATT+CGG + chr5_4:2396203-2396222 Msa0829460:three_prime_UTR 30.0%
GATTCATAACTATTGTTTGC+TGG + chr5_4:2396271-2396290 Msa0829460:three_prime_UTR 30.0%
ATATGAATATGACAGGTTAG+TGG + chr5_4:2396346-2396365 Msa0829460:three_prime_UTR 30.0%
TATGAATATGACAGGTTAGT+GGG + chr5_4:2396347-2396366 Msa0829460:three_prime_UTR 30.0%
TATGAGAGTCGAAAGAACAA+TGG + chr5_4:2394425-2394444 Msa0829460:CDS 35.0%
!! TTTTGTGTTATTCGCAGTTC+CGG - chr5_4:2394474-2394493 None:intergenic 35.0%
TGCAGAAGTTTCTGATGATT+TGG + chr5_4:2394559-2394578 Msa0829460:CDS 35.0%
GATATTCTAACAACCTCATC+AGG - chr5_4:2394719-2394738 None:intergenic 35.0%
TCCTATTCCTGAATCTACTA+AGG + chr5_4:2394802-2394821 Msa0829460:CDS 35.0%
CCTATTCCTGAATCTACTAA+GGG + chr5_4:2394803-2394822 Msa0829460:CDS 35.0%
CTGAATTTATCTACTAGAGC+CGG - chr5_4:2395085-2395104 None:intergenic 35.0%
GTAGATGGTTATAAAGCAGA+TGG + chr5_4:2395151-2395170 Msa0829460:intron 35.0%
GTTGAGTAAATGCTACAAAC+TGG - chr5_4:2395380-2395399 None:intergenic 35.0%
! AACTTCATACTTGTTACTCG+AGG - chr5_4:2395792-2395811 None:intergenic 35.0%
!! TGGTGGATTCATTGGAATTT+GGG + chr5_4:2395913-2395932 Msa0829460:CDS 35.0%
GAACTATATTGATGCAGGAT+TGG + chr5_4:2396088-2396107 Msa0829460:intron 35.0%
GATTCCATCTTAGTGAAATC+TGG - chr5_4:2396200-2396219 None:intergenic 35.0%
TATGAGAGTCGAAAGAACAA+TGG + chr5_4:2394425-2394444 Msa0829460:CDS 35.0%
!! TTTTGTGTTATTCGCAGTTC+CGG - chr5_4:2394474-2394493 None:intergenic 35.0%
TGCAGAAGTTTCTGATGATT+TGG + chr5_4:2394559-2394578 Msa0829460:CDS 35.0%
GATATTCTAACAACCTCATC+AGG - chr5_4:2394719-2394738 None:intergenic 35.0%
TCCTATTCCTGAATCTACTA+AGG + chr5_4:2394802-2394821 Msa0829460:CDS 35.0%
CCTATTCCTGAATCTACTAA+GGG + chr5_4:2394803-2394822 Msa0829460:CDS 35.0%
CTGAATTTATCTACTAGAGC+CGG - chr5_4:2395085-2395104 None:intergenic 35.0%
GTAGATGGTTATAAAGCAGA+TGG + chr5_4:2395151-2395170 Msa0829460:intron 35.0%
GTTGAGTAAATGCTACAAAC+TGG - chr5_4:2395380-2395399 None:intergenic 35.0%
! AACTTCATACTTGTTACTCG+AGG - chr5_4:2395792-2395811 None:intergenic 35.0%
!! TGGTGGATTCATTGGAATTT+GGG + chr5_4:2395913-2395932 Msa0829460:CDS 35.0%
GAACTATATTGATGCAGGAT+TGG + chr5_4:2396088-2396107 Msa0829460:intron 35.0%
GATTCCATCTTAGTGAAATC+TGG - chr5_4:2396200-2396219 None:intergenic 35.0%
!! TTCTGCTGATTCAGTAAAGG+AGG + chr5_4:2394523-2394542 Msa0829460:CDS 40.0%
!! TCTGCTGATTCAGTAAAGGA+GGG + chr5_4:2394524-2394543 Msa0829460:CDS 40.0%
AGTACAAGTCTTACCTGATG+AGG + chr5_4:2394703-2394722 Msa0829460:CDS 40.0%
CCCTTAGTAGATTCAGGAAT+AGG - chr5_4:2394806-2394825 None:intergenic 40.0%
TCTACACCCTTAGTAGATTC+AGG - chr5_4:2394812-2394831 None:intergenic 40.0%
!! TGCAGAAAGCTCTGAAAATC+AGG + chr5_4:2394853-2394872 Msa0829460:CDS 40.0%
AATTATTTACATGCAGCCCC+CGG + chr5_4:2394996-2395015 Msa0829460:intron 40.0%
! CGGCTCTAGTAGATAAATTC+AGG + chr5_4:2395083-2395102 Msa0829460:intron 40.0%
TTGGCACTTGCATTCATTCT+TGG + chr5_4:2395188-2395207 Msa0829460:CDS 40.0%
CTTGCATTCATTCTTGGAAC+AGG + chr5_4:2395194-2395213 Msa0829460:CDS 40.0%
! TTTTCAACCCTCTCAAAGAG+TGG + chr5_4:2395328-2395347 Msa0829460:intron 40.0%
! GTAAGTTCCACTCTTTGAGA+GGG - chr5_4:2395338-2395357 None:intergenic 40.0%
TGTAAGTTCCACTCTTTGAG+AGG - chr5_4:2395339-2395358 None:intergenic 40.0%
TACAAAGGCCAAACAGTTCA+GGG - chr5_4:2395403-2395422 None:intergenic 40.0%
ATACAAAGGCCAAACAGTTC+AGG - chr5_4:2395404-2395423 None:intergenic 40.0%
ATGGATGAAGTTGCATACCA+TGG - chr5_4:2395475-2395494 None:intergenic 40.0%
TTTACTTTCAGCCTTCTCCA+TGG + chr5_4:2395515-2395534 Msa0829460:intron 40.0%
ATATAGACTCACCATGGAGA+AGG - chr5_4:2395529-2395548 None:intergenic 40.0%
TATAACGCACAAACAGACAC+CGG - chr5_4:2395731-2395750 None:intergenic 40.0%
!!! CTACTTATTTTGTCAACCGC+TGG + chr5_4:2395893-2395912 Msa0829460:CDS 40.0%
AATTCCAATGAATCCACCAG+CGG - chr5_4:2395912-2395931 None:intergenic 40.0%
!! CTGGTGGATTCATTGGAATT+TGG + chr5_4:2395912-2395931 Msa0829460:CDS 40.0%
!! ATGAGTCTAAGAGCATTTGC+TGG + chr5_4:2395953-2395972 Msa0829460:CDS 40.0%
TCCAAGACACTTGCAACATT+TGG + chr5_4:2396045-2396064 Msa0829460:intron 40.0%
TCCAAATGTTGCAAGTGTCT+TGG - chr5_4:2396049-2396068 None:intergenic 40.0%
TATTGATGCAGGATTGGAAC+TGG + chr5_4:2396094-2396113 Msa0829460:intron 40.0%
!! TGAAGAATTTGCTGACACTC+TGG + chr5_4:2396232-2396251 Msa0829460:three_prime_UTR 40.0%
! AATATGACAGGTTAGTGGGT+TGG + chr5_4:2396351-2396370 Msa0829460:three_prime_UTR 40.0%
!! TTCTGCTGATTCAGTAAAGG+AGG + chr5_4:2394523-2394542 Msa0829460:CDS 40.0%
!! TCTGCTGATTCAGTAAAGGA+GGG + chr5_4:2394524-2394543 Msa0829460:CDS 40.0%
AGTACAAGTCTTACCTGATG+AGG + chr5_4:2394703-2394722 Msa0829460:CDS 40.0%
CCCTTAGTAGATTCAGGAAT+AGG - chr5_4:2394806-2394825 None:intergenic 40.0%
TCTACACCCTTAGTAGATTC+AGG - chr5_4:2394812-2394831 None:intergenic 40.0%
!! TGCAGAAAGCTCTGAAAATC+AGG + chr5_4:2394853-2394872 Msa0829460:CDS 40.0%
AATTATTTACATGCAGCCCC+CGG + chr5_4:2394996-2395015 Msa0829460:intron 40.0%
! CGGCTCTAGTAGATAAATTC+AGG + chr5_4:2395083-2395102 Msa0829460:intron 40.0%
TTGGCACTTGCATTCATTCT+TGG + chr5_4:2395188-2395207 Msa0829460:CDS 40.0%
CTTGCATTCATTCTTGGAAC+AGG + chr5_4:2395194-2395213 Msa0829460:CDS 40.0%
! TTTTCAACCCTCTCAAAGAG+TGG + chr5_4:2395328-2395347 Msa0829460:intron 40.0%
! GTAAGTTCCACTCTTTGAGA+GGG - chr5_4:2395338-2395357 None:intergenic 40.0%
TGTAAGTTCCACTCTTTGAG+AGG - chr5_4:2395339-2395358 None:intergenic 40.0%
TACAAAGGCCAAACAGTTCA+GGG - chr5_4:2395403-2395422 None:intergenic 40.0%
ATACAAAGGCCAAACAGTTC+AGG - chr5_4:2395404-2395423 None:intergenic 40.0%
ATGGATGAAGTTGCATACCA+TGG - chr5_4:2395475-2395494 None:intergenic 40.0%
TTTACTTTCAGCCTTCTCCA+TGG + chr5_4:2395515-2395534 Msa0829460:intron 40.0%
ATATAGACTCACCATGGAGA+AGG - chr5_4:2395529-2395548 None:intergenic 40.0%
TATAACGCACAAACAGACAC+CGG - chr5_4:2395731-2395750 None:intergenic 40.0%
!!! CTACTTATTTTGTCAACCGC+TGG + chr5_4:2395893-2395912 Msa0829460:CDS 40.0%
AATTCCAATGAATCCACCAG+CGG - chr5_4:2395912-2395931 None:intergenic 40.0%
!! CTGGTGGATTCATTGGAATT+TGG + chr5_4:2395912-2395931 Msa0829460:CDS 40.0%
!! ATGAGTCTAAGAGCATTTGC+TGG + chr5_4:2395953-2395972 Msa0829460:CDS 40.0%
TCCAAGACACTTGCAACATT+TGG + chr5_4:2396045-2396064 Msa0829460:intron 40.0%
TCCAAATGTTGCAAGTGTCT+TGG - chr5_4:2396049-2396068 None:intergenic 40.0%
TATTGATGCAGGATTGGAAC+TGG + chr5_4:2396094-2396113 Msa0829460:intron 40.0%
!! TGAAGAATTTGCTGACACTC+TGG + chr5_4:2396232-2396251 Msa0829460:three_prime_UTR 40.0%
! AATATGACAGGTTAGTGGGT+TGG + chr5_4:2396351-2396370 Msa0829460:three_prime_UTR 40.0%
! GGAGAAAATTGACTCTCCGA+AGG + chr5_4:2394394-2394413 Msa0829460:CDS 45.0%
GAGAGTCGAAAGAACAATGG+CGG + chr5_4:2394428-2394447 Msa0829460:CDS 45.0%
!! TCTGTCTCTGAGATGCAAAG+CGG + chr5_4:2394596-2394615 Msa0829460:CDS 45.0%
! TCTTGCTGTGAAGAGAAGTG+AGG + chr5_4:2394676-2394695 Msa0829460:CDS 45.0%
TTTGAAGGAACCCGAGACTA+GGG + chr5_4:2394742-2394761 Msa0829460:CDS 45.0%
TTCAGAGCTTTCTGCAGCAT+TGG - chr5_4:2394849-2394868 None:intergenic 45.0%
GGCCTGTTTGATGTTCTATC+CGG + chr5_4:2395063-2395082 Msa0829460:intron 45.0%
AGCCGGATAGAACATCAAAC+AGG - chr5_4:2395068-2395087 None:intergenic 45.0%
GGTTATAAAGCAGATGGGCA+TGG + chr5_4:2395157-2395176 Msa0829460:CDS 45.0%
CTTGGAACAGGATTGCACTT+TGG + chr5_4:2395206-2395225 Msa0829460:CDS 45.0%
TCCTGCACCTCATTAGAGTT+GGG + chr5_4:2395258-2395277 Msa0829460:intron 45.0%
TACTCAACCCCTGAACTGTT+TGG + chr5_4:2395392-2395411 Msa0829460:CDS 45.0%
ACAAAGGCCAAACAGTTCAG+GGG - chr5_4:2395402-2395421 None:intergenic 45.0%
TGCATATTCAGCCTTCTCCA+TGG + chr5_4:2395455-2395474 Msa0829460:CDS 45.0%
GAAGTTGCATACCATGGAGA+AGG - chr5_4:2395469-2395488 None:intergenic 45.0%
ACGTCTTTGATGCGAAGTGT+CGG - chr5_4:2395612-2395631 None:intergenic 45.0%
CTTCGCATCAAAGACGTGTT+TGG + chr5_4:2395615-2395634 Msa0829460:intron 45.0%
!! CAACATGTCAGTGTCGTTTC+CGG + chr5_4:2395709-2395728 Msa0829460:intron 45.0%
GGTGTCTGTTTGTGCGTTAT+AGG + chr5_4:2395730-2395749 Msa0829460:intron 45.0%
!!! CTTATTTTGTCAACCGCTGG+TGG + chr5_4:2395896-2395915 Msa0829460:CDS 45.0%
TAGCTCCTAAGGAATTCCCA+TGG - chr5_4:2396127-2396146 None:intergenic 45.0%
AGTGTTGTGATGACAGGAGT+GGG + chr5_4:2396173-2396192 Msa0829460:three_prime_UTR 45.0%
GGGTCCAGATTTCACTAAGA+TGG + chr5_4:2396193-2396212 Msa0829460:three_prime_UTR 45.0%
AGAAGCTGGAAAAAACCACC+TGG + chr5_4:2396376-2396395 Msa0829460:three_prime_UTR 45.0%
! GGAGAAAATTGACTCTCCGA+AGG + chr5_4:2394394-2394413 Msa0829460:CDS 45.0%
GAGAGTCGAAAGAACAATGG+CGG + chr5_4:2394428-2394447 Msa0829460:CDS 45.0%
!! TCTGTCTCTGAGATGCAAAG+CGG + chr5_4:2394596-2394615 Msa0829460:CDS 45.0%
! TCTTGCTGTGAAGAGAAGTG+AGG + chr5_4:2394676-2394695 Msa0829460:CDS 45.0%
TTTGAAGGAACCCGAGACTA+GGG + chr5_4:2394742-2394761 Msa0829460:CDS 45.0%
TTCAGAGCTTTCTGCAGCAT+TGG - chr5_4:2394849-2394868 None:intergenic 45.0%
GGCCTGTTTGATGTTCTATC+CGG + chr5_4:2395063-2395082 Msa0829460:intron 45.0%
AGCCGGATAGAACATCAAAC+AGG - chr5_4:2395068-2395087 None:intergenic 45.0%
GGTTATAAAGCAGATGGGCA+TGG + chr5_4:2395157-2395176 Msa0829460:CDS 45.0%
CTTGGAACAGGATTGCACTT+TGG + chr5_4:2395206-2395225 Msa0829460:CDS 45.0%
TCCTGCACCTCATTAGAGTT+GGG + chr5_4:2395258-2395277 Msa0829460:intron 45.0%
TACTCAACCCCTGAACTGTT+TGG + chr5_4:2395392-2395411 Msa0829460:CDS 45.0%
ACAAAGGCCAAACAGTTCAG+GGG - chr5_4:2395402-2395421 None:intergenic 45.0%
TGCATATTCAGCCTTCTCCA+TGG + chr5_4:2395455-2395474 Msa0829460:CDS 45.0%
GAAGTTGCATACCATGGAGA+AGG - chr5_4:2395469-2395488 None:intergenic 45.0%
ACGTCTTTGATGCGAAGTGT+CGG - chr5_4:2395612-2395631 None:intergenic 45.0%
CTTCGCATCAAAGACGTGTT+TGG + chr5_4:2395615-2395634 Msa0829460:intron 45.0%
!! CAACATGTCAGTGTCGTTTC+CGG + chr5_4:2395709-2395728 Msa0829460:intron 45.0%
GGTGTCTGTTTGTGCGTTAT+AGG + chr5_4:2395730-2395749 Msa0829460:intron 45.0%
!!! CTTATTTTGTCAACCGCTGG+TGG + chr5_4:2395896-2395915 Msa0829460:CDS 45.0%
TAGCTCCTAAGGAATTCCCA+TGG - chr5_4:2396127-2396146 None:intergenic 45.0%
AGTGTTGTGATGACAGGAGT+GGG + chr5_4:2396173-2396192 Msa0829460:three_prime_UTR 45.0%
GGGTCCAGATTTCACTAAGA+TGG + chr5_4:2396193-2396212 Msa0829460:three_prime_UTR 45.0%
AGAAGCTGGAAAAAACCACC+TGG + chr5_4:2396376-2396395 Msa0829460:three_prime_UTR 45.0%
GCTTTGCATCTCAGAGACAG+AGG - chr5_4:2394597-2394616 None:intergenic 50.0%
ATCATTGGGCTCTCCAGTTG+CGG + chr5_4:2394646-2394665 Msa0829460:CDS 50.0%
GCAAGATCAGTTTCCGCAAC+TGG - chr5_4:2394662-2394681 None:intergenic 50.0%
GTTTGAAGGAACCCGAGACT+AGG + chr5_4:2394741-2394760 Msa0829460:CDS 50.0%
CCGTCAAATTCCCTAGTCTC+GGG - chr5_4:2394755-2394774 None:intergenic 50.0%
CCCGAGACTAGGGAATTTGA+CGG + chr5_4:2394752-2394771 Msa0829460:CDS 50.0%
CCCGTCAAATTCCCTAGTCT+CGG - chr5_4:2394756-2394775 None:intergenic 50.0%
CCGAGACTAGGGAATTTGAC+GGG + chr5_4:2394753-2394772 Msa0829460:CDS 50.0%
GACGTCTTATGCACCATAGG+CGG - chr5_4:2395027-2395046 None:intergenic 50.0%
CAGGACGTCTTATGCACCAT+AGG - chr5_4:2395030-2395049 None:intergenic 50.0%
CTATGGTGCATAAGACGTCC+TGG + chr5_4:2395028-2395047 Msa0829460:intron 50.0%
!! ACGTCCTGGTTGAGTTGATG+TGG + chr5_4:2395042-2395061 Msa0829460:intron 50.0%
AAGCAGATGGGCATGGTTCT+TGG + chr5_4:2395164-2395183 Msa0829460:CDS 50.0%
GATGGGCATGGTTCTTGGAT+TGG + chr5_4:2395169-2395188 Msa0829460:CDS 50.0%
GTCCTGCACCTCATTAGAGT+TGG + chr5_4:2395257-2395276 Msa0829460:intron 50.0%
TCCCAACTCTAATGAGGTGC+AGG - chr5_4:2395262-2395281 None:intergenic 50.0%
TCGGGATCCCAACTCTAATG+AGG - chr5_4:2395268-2395287 None:intergenic 50.0%
CGGAAACGACACTGACATGT+TGG - chr5_4:2395711-2395730 None:intergenic 50.0%
!! TCAACCGCTGGTGGATTCAT+TGG + chr5_4:2395905-2395924 Msa0829460:CDS 50.0%
!! GAGCATTTGCTGGCTTCTTG+AGG + chr5_4:2395963-2395982 Msa0829460:CDS 50.0%
TGCAGGATTGGAACTGGATC+AGG + chr5_4:2396100-2396119 Msa0829460:intron 50.0%
TTGGAACTGGATCAGGACCA+TGG + chr5_4:2396107-2396126 Msa0829460:CDS 50.0%
TGGAACTGGATCAGGACCAT+GGG + chr5_4:2396108-2396127 Msa0829460:CDS 50.0%
CAGGACCATGGGAATTCCTT+AGG + chr5_4:2396119-2396138 Msa0829460:CDS 50.0%
! GCAGTGAGTGTTGTGATGAC+AGG + chr5_4:2396167-2396186 Msa0829460:three_prime_UTR 50.0%
! GAGTGTTGTGATGACAGGAG+TGG + chr5_4:2396172-2396191 Msa0829460:three_prime_UTR 50.0%
!! TTAGTGGGTTGGACAGAAGC+TGG + chr5_4:2396362-2396381 Msa0829460:three_prime_UTR 50.0%
CTGGAAAAAACCACCTGGTG+TGG + chr5_4:2396381-2396400 Msa0829460:three_prime_UTR 50.0%
GCTTTGCATCTCAGAGACAG+AGG - chr5_4:2394597-2394616 None:intergenic 50.0%
ATCATTGGGCTCTCCAGTTG+CGG + chr5_4:2394646-2394665 Msa0829460:CDS 50.0%
GCAAGATCAGTTTCCGCAAC+TGG - chr5_4:2394662-2394681 None:intergenic 50.0%
GTTTGAAGGAACCCGAGACT+AGG + chr5_4:2394741-2394760 Msa0829460:CDS 50.0%
CCGTCAAATTCCCTAGTCTC+GGG - chr5_4:2394755-2394774 None:intergenic 50.0%
CCCGAGACTAGGGAATTTGA+CGG + chr5_4:2394752-2394771 Msa0829460:CDS 50.0%
CCCGTCAAATTCCCTAGTCT+CGG - chr5_4:2394756-2394775 None:intergenic 50.0%
CCGAGACTAGGGAATTTGAC+GGG + chr5_4:2394753-2394772 Msa0829460:CDS 50.0%
GACGTCTTATGCACCATAGG+CGG - chr5_4:2395027-2395046 None:intergenic 50.0%
CAGGACGTCTTATGCACCAT+AGG - chr5_4:2395030-2395049 None:intergenic 50.0%
CTATGGTGCATAAGACGTCC+TGG + chr5_4:2395028-2395047 Msa0829460:intron 50.0%
!! ACGTCCTGGTTGAGTTGATG+TGG + chr5_4:2395042-2395061 Msa0829460:intron 50.0%
AAGCAGATGGGCATGGTTCT+TGG + chr5_4:2395164-2395183 Msa0829460:CDS 50.0%
GATGGGCATGGTTCTTGGAT+TGG + chr5_4:2395169-2395188 Msa0829460:CDS 50.0%
GTCCTGCACCTCATTAGAGT+TGG + chr5_4:2395257-2395276 Msa0829460:intron 50.0%
TCCCAACTCTAATGAGGTGC+AGG - chr5_4:2395262-2395281 None:intergenic 50.0%
TCGGGATCCCAACTCTAATG+AGG - chr5_4:2395268-2395287 None:intergenic 50.0%
CGGAAACGACACTGACATGT+TGG - chr5_4:2395711-2395730 None:intergenic 50.0%
!! TCAACCGCTGGTGGATTCAT+TGG + chr5_4:2395905-2395924 Msa0829460:CDS 50.0%
!! GAGCATTTGCTGGCTTCTTG+AGG + chr5_4:2395963-2395982 Msa0829460:CDS 50.0%
TGCAGGATTGGAACTGGATC+AGG + chr5_4:2396100-2396119 Msa0829460:intron 50.0%
TTGGAACTGGATCAGGACCA+TGG + chr5_4:2396107-2396126 Msa0829460:CDS 50.0%
TGGAACTGGATCAGGACCAT+GGG + chr5_4:2396108-2396127 Msa0829460:CDS 50.0%
CAGGACCATGGGAATTCCTT+AGG + chr5_4:2396119-2396138 Msa0829460:CDS 50.0%
! GCAGTGAGTGTTGTGATGAC+AGG + chr5_4:2396167-2396186 Msa0829460:three_prime_UTR 50.0%
! GAGTGTTGTGATGACAGGAG+TGG + chr5_4:2396172-2396191 Msa0829460:three_prime_UTR 50.0%
!! TTAGTGGGTTGGACAGAAGC+TGG + chr5_4:2396362-2396381 Msa0829460:three_prime_UTR 50.0%
CTGGAAAAAACCACCTGGTG+TGG + chr5_4:2396381-2396400 Msa0829460:three_prime_UTR 50.0%
!! GTCTCTGAGATGCAAAGCGG+AGG + chr5_4:2394599-2394618 Msa0829460:CDS 55.0%
TGTGCGCTCGTTTGTGTGTC+AGG - chr5_4:2394894-2394913 None:intergenic 55.0%
CAGGCCACATCAACTCAACC+AGG - chr5_4:2395049-2395068 None:intergenic 55.0%
!! CCACATGTCGGTGTCGAACA+CGG - chr5_4:2395655-2395674 None:intergenic 55.0%
AGTTTAGCAGCCACACCAGG+TGG - chr5_4:2396394-2396413 None:intergenic 55.0%
!! GTCTCTGAGATGCAAAGCGG+AGG + chr5_4:2394599-2394618 Msa0829460:CDS 55.0%
TGTGCGCTCGTTTGTGTGTC+AGG - chr5_4:2394894-2394913 None:intergenic 55.0%
CAGGCCACATCAACTCAACC+AGG - chr5_4:2395049-2395068 None:intergenic 55.0%
!! CCACATGTCGGTGTCGAACA+CGG - chr5_4:2395655-2395674 None:intergenic 55.0%
AGTTTAGCAGCCACACCAGG+TGG - chr5_4:2396394-2396413 None:intergenic 55.0%
TGCACCATAGGCGGAGCTAC+CGG - chr5_4:2395018-2395037 None:intergenic 60.0%
CCGTGTTCGACACCGACATG+TGG + chr5_4:2395652-2395671 Msa0829460:intron 60.0%
TGCACCATAGGCGGAGCTAC+CGG - chr5_4:2395018-2395037 None:intergenic 60.0%
CCGTGTTCGACACCGACATG+TGG + chr5_4:2395652-2395671 Msa0829460:intron 60.0%
ACCATAGGCGGAGCTACCGG+GGG - chr5_4:2395015-2395034 None:intergenic 65.0%
CACCATAGGCGGAGCTACCG+GGG - chr5_4:2395016-2395035 None:intergenic 65.0%
GCACCATAGGCGGAGCTACC+GGG - chr5_4:2395017-2395036 None:intergenic 65.0%
ACCATAGGCGGAGCTACCGG+GGG - chr5_4:2395015-2395034 None:intergenic 65.0%
CACCATAGGCGGAGCTACCG+GGG - chr5_4:2395016-2395035 None:intergenic 65.0%
GCACCATAGGCGGAGCTACC+GGG - chr5_4:2395017-2395036 None:intergenic 65.0%
GCCCCCGGTAGCTCCGCCTA+TGG + chr5_4:2395011-2395030 Msa0829460:intron 75.0%
GCCCCCGGTAGCTCCGCCTA+TGG + chr5_4:2395011-2395030 Msa0829460:intron 75.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 2394374 2396414 2394374 ID=Msa0829460;Name=Msa0829460
chr5_4 mRNA 2394374 2396414 2394374 ID=Msa0829460-mRNA-1;Parent=Msa0829460;Name=Msa0829460-mRNA-1;_AED=0.20;_eAED=0.23;_QI=0|0.33|0.28|0.85|0.33|0.42|7|267|288
chr5_4 exon 2394374 2394620 2394374 ID=Msa0829460-mRNA-1:exon:821;Parent=Msa0829460-mRNA-1
chr5_4 exon 2394642 2394874 2394642 ID=Msa0829460-mRNA-1:exon:822;Parent=Msa0829460-mRNA-1
chr5_4 exon 2395012 2395017 2395012 ID=Msa0829460-mRNA-1:exon:823;Parent=Msa0829460-mRNA-1
chr5_4 exon 2395155 2395274 2395155 ID=Msa0829460-mRNA-1:exon:824;Parent=Msa0829460-mRNA-1
chr5_4 exon 2395381 2395476 2395381 ID=Msa0829460-mRNA-1:exon:825;Parent=Msa0829460-mRNA-1
chr5_4 exon 2395863 2395984 2395863 ID=Msa0829460-mRNA-1:exon:826;Parent=Msa0829460-mRNA-1
chr5_4 exon 2396105 2396414 2396105 ID=Msa0829460-mRNA-1:exon:827;Parent=Msa0829460-mRNA-1
chr5_4 CDS 2394374 2394620 2394374 ID=Msa0829460-mRNA-1:cds;Parent=Msa0829460-mRNA-1
chr5_4 CDS 2394642 2394874 2394642 ID=Msa0829460-mRNA-1:cds;Parent=Msa0829460-mRNA-1
chr5_4 CDS 2395012 2395017 2395012 ID=Msa0829460-mRNA-1:cds;Parent=Msa0829460-mRNA-1
chr5_4 CDS 2395155 2395274 2395155 ID=Msa0829460-mRNA-1:cds;Parent=Msa0829460-mRNA-1
chr5_4 CDS 2395381 2395476 2395381 ID=Msa0829460-mRNA-1:cds;Parent=Msa0829460-mRNA-1
chr5_4 CDS 2395863 2395984 2395863 ID=Msa0829460-mRNA-1:cds;Parent=Msa0829460-mRNA-1
chr5_4 CDS 2396105 2396147 2396105 ID=Msa0829460-mRNA-1:cds;Parent=Msa0829460-mRNA-1
chr5_4 three_prime_UTR 2396148 2396414 2396148 ID=Msa0829460-mRNA-1:three_prime_utr;Parent=Msa0829460-mRNA-1
Gene Sequence

>Msa0829460

ATGAAGTTTGAGGAGCGTTTGGAGAAAATTGACTCTCCGAAGGATTTGAATTATGAGAGTCGAAAGAACAATGGCGGTTCAAATGATGTGATTGAAACCGGAACTGCGAATAACACAAAAGATGAACCTTATAATTCAGTTGCAGAATTTTCTGCTGATTCAGTAAAGGAGGGTGATAATTCAGTTGCAGAAGTTTCTGATGATTTGGTTAAGGTTGTGACCTCTGTCTCTGAGATGCAAAGCGGAGAGAAATCATTGGGCTCTCCAGTTGCGGAAACTGATCTTGCTGTGAAGAGAAGTGAGGATAAAGTACAAGTCTTACCTGATGAGGTTGTTAGAATATCGAGTTTGAAGGAACCCGAGACTAGGGAATTTGACGGGAAAGTATCTTCGTCAGTGTCTCAAAGTCCTATTCCTGAATCTACTAAGGGTGTAGAAAATGTTAAAGATTCCAATGCTGCAGAAAGCTCTGAAAATCAGCCCCCGATGGTTATAAAGCAGATGGGCATGGTTCTTGGATTGGCACTTGCATTCATTCTTGGAACAGGATTGCACTTTGGAGCTAAACTATTTACAAAAGATGTTGATGTCCTGCACCTCATTAGATTTGTAGCATTTACTCAACCCCTGAACTGTTTGGCCTTTGTATTTAATGGTGTCAACTTTGGGGCATCTGATTTTGCATATTCAGCCTTCTCCATGGTTATAGTAGCAATTATTAGCATAATTTGTCTACTTATTTTGTCAACCGCTGGTGGATTCATTGGAATTTGGGTTGTTTTGACTATTTATATGAGTCTAAGAGCATTTGCTGGCTTCTTGAGGATTGGAACTGGATCAGGACCATGGGAATTCCTTAGGAGCTAA
Protein sequence

>Msa0829460

MKFEERLEKIDSPKDLNYESRKNNGGSNDVIETGTANNTKDEPYNSVAEFSADSVKEGDNSVAEVSDDLVKVVTSVSEMQSGEKSLGSPVAETDLAVKRSEDKVQVLPDEVVRISSLKEPETREFDGKVSSSVSQSPIPESTKGVENVKDSNAAESSENQPPMVIKQMGMVLGLALAFILGTGLHFGAKLFTKDVDVLHLIRFVAFTQPLNCLAFVFNGVNFGASDFAYSAFSMVIVAIISIICLLILSTAGGFIGIWVVLTIYMSLRAFAGFLRIGTGSGPWEFLRS*