AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0829480

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0829480 MtrunA17_Chr2g0303921 76.608 171 19 2 1 164 110 266 4.87e-71 221
Msa0829480 MtrunA17_Chr2g0328761 83.333 144 16 2 149 288 368 507 8.13e-67 216
Msa0829480 MtrunA17_Chr3g0088471 56.643 143 54 2 149 287 397 535 1.47e-47 166
Msa0829480 MtrunA17_Chr8g0352171 56.349 126 51 1 167 288 263 388 2.22e-43 152
Msa0829480 MtrunA17_Chr8g0352151 48.252 143 66 2 149 287 413 551 5.68e-40 146
Msa0829480 MtrunA17_Chr5g0448591 40.945 127 71 1 165 287 423 549 8.36e-26 106
Msa0829480 MtrunA17_Chr7g0243421 37.162 148 86 2 146 286 123 270 2.13e-22 94.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0829480 AT1G51340.1 63.194 144 45 2 149 288 370 509 3.17e-53 181
Msa0829480 AT1G51340.3 63.194 144 45 2 149 288 376 515 4.91e-53 181
Msa0829480 AT1G51340.5 63.194 144 45 2 149 288 376 515 4.91e-53 181
Msa0829480 AT1G51340.2 63.194 144 45 2 149 288 376 515 4.91e-53 181
Msa0829480 AT3G08040.2 54.545 143 57 2 149 287 276 414 2.12e-44 156
Msa0829480 AT3G08040.1 54.545 143 57 2 149 287 380 518 8.49e-44 156
Msa0829480 AT4G38380.2 42.969 128 69 1 165 288 427 554 1.15e-25 106
Msa0829480 AT4G38380.1 42.969 128 69 1 165 288 427 554 1.15e-25 106
Msa0829480 AT4G38380.5 42.969 128 69 1 165 288 417 544 2.33e-25 105
Msa0829480 AT4G38380.3 42.969 128 69 1 165 288 355 482 8.40e-25 103
Msa0829480 AT4G38380.4 42.969 128 69 1 165 288 317 444 8.79e-25 103
Msa0829480 AT2G38330.1 42.188 128 70 1 165 288 388 515 5.33e-24 101

Find 84 sgRNAs with CRISPR-Local

Find 286 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGGTGGATTCATTGGAATT+TGG 0.178835 5_4:+2437331 Msa0829480:CDS
TATTTAATGGTGTCAACTTT+GGG 0.258127 5_4:+2436840 Msa0829480:CDS
TGTTTGGCCTTTGTATTTAA+TGG 0.267368 5_4:+2436827 Msa0829480:CDS
AAGCAGATGGGCATGGTTCT+TGG 0.282921 5_4:+2436583 Msa0829480:CDS
AATTCTGCAACTGAATTATA+AGG 0.291751 5_4:-2435919 None:intergenic
TTGGCACTTGCATTCATTCT+TGG 0.305585 5_4:+2436607 Msa0829480:CDS
TGCAGAAGTTTCTGATGATT+TGG 0.309695 5_4:+2435978 Msa0829480:CDS
TCTACACCCTTAGTAGATTC+AGG 0.310531 5_4:-2436228 None:intergenic
GATTCATAACTATTGTTTGC+TGG 0.341036 5_4:+2437690 Msa0829480:three_prime_UTR
ATACAAAGGCCAAACAGTTC+AGG 0.350521 5_4:-2436820 None:intergenic
TGGTGGATTCATTGGAATTT+GGG 0.353696 5_4:+2437332 Msa0829480:CDS
GTATTTAATGGTGTCAACTT+TGG 0.358346 5_4:+2436839 Msa0829480:CDS
TCAACCGCTGGTGGATTCAT+TGG 0.366302 5_4:+2437324 Msa0829480:CDS
GCAAGATCAGTTTCCGCAAC+TGG 0.367595 5_4:-2436078 None:intergenic
GATTCCATCTTAGTGAAATC+TGG 0.369687 5_4:-2437616 None:intergenic
CCCGTCAAATTCCCTAGTCT+CGG 0.375066 5_4:-2436172 None:intergenic
TGCAGAAAGCTCTGAAAATC+AGG 0.376100 5_4:+2436272 Msa0829480:CDS
CTTGCATTCATTCTTGGAAC+AGG 0.384448 5_4:+2436613 Msa0829480:CDS
TATGAAGTTTGAGGAGCGTT+TGG 0.399210 5_4:+2435792 None:intergenic
TACTCAACCCCTGAACTGTT+TGG 0.403896 5_4:+2436811 Msa0829480:CDS
TCCTATTCCTGAATCTACTA+AGG 0.416258 5_4:+2436221 Msa0829480:CDS
AGTTTCTGATGATTTGGTTA+AGG 0.419545 5_4:+2435984 Msa0829480:CDS
CTCTCATAATTCAAATCCTT+CGG 0.430722 5_4:-2435829 None:intergenic
TTCAGAGCTTTCTGCAGCAT+TGG 0.431912 5_4:-2436265 None:intergenic
TATTGATGCAGGATTGGAAC+TGG 0.437676 5_4:+2437513 Msa0829480:intron
TGCAGGATTGGAACTGGATC+AGG 0.440539 5_4:+2437519 Msa0829480:intron
ATGAGTCTAAGAGCATTTGC+TGG 0.445196 5_4:+2437372 Msa0829480:CDS
CCCTTAGTAGATTCAGGAAT+AGG 0.447048 5_4:-2436222 None:intergenic
CTTGGAACAGGATTGCACTT+TGG 0.450496 5_4:+2436625 Msa0829480:CDS
CAGGACCATGGGAATTCCTT+AGG 0.451204 5_4:+2437538 Msa0829480:CDS
TACAAAGGCCAAACAGTTCA+GGG 0.452053 5_4:-2436819 None:intergenic
TCAAATGATGTGATTGAAAC+CGG 0.452898 5_4:+2435871 Msa0829480:CDS
TCAATAACAATTAGCTCCTA+AGG 0.461793 5_4:-2437554 None:intergenic
GATATTCTAACAACCTCATC+AGG 0.474364 5_4:-2436135 None:intergenic
TTGCTTAATATGAATATGAC+AGG 0.476496 5_4:+2437758 Msa0829480:three_prime_UTR
CCGTCAAATTCCCTAGTCTC+GGG 0.482097 5_4:-2436171 None:intergenic
GGGTCCAGATTTCACTAAGA+TGG 0.482457 5_4:+2437612 Msa0829480:three_prime_UTR
TGATATACTAGAGAAATCAT+TGG 0.482953 5_4:+2436050 Msa0829480:intron
CCCGAGACTAGGGAATTTGA+CGG 0.485416 5_4:+2436171 Msa0829480:CDS
GATGGGCATGGTTCTTGGAT+TGG 0.490847 5_4:+2436588 Msa0829480:CDS
TTAGTGGGTTGGACAGAAGC+TGG 0.491375 5_4:+2437781 Msa0829480:three_prime_UTR
TTCACTAAGATGGAATCATT+CGG 0.491585 5_4:+2437622 Msa0829480:three_prime_UTR
TGTTAGAATATCGAGTTTGA+AGG 0.502677 5_4:+2436146 Msa0829480:CDS
TCCCAACTCTAATGAGGTGC+AGG 0.503744 5_4:-2436678 None:intergenic
TATGAATATGACAGGTTAGT+GGG 0.511045 5_4:+2437766 Msa0829480:three_prime_UTR
GATATACTAGAGAAATCATT+GGG 0.514095 5_4:+2436051 Msa0829480:intron
GTTTGAAGGAACCCGAGACT+AGG 0.516717 5_4:+2436160 Msa0829480:CDS
AGAATGGGGTATGAAGTTTG+AGG 0.531269 5_4:+2435783 None:intergenic
TTCTGCTGATTCAGTAAAGG+AGG 0.540629 5_4:+2435942 Msa0829480:CDS
ATATGAATATGACAGGTTAG+TGG 0.543159 5_4:+2437765 Msa0829480:three_prime_UTR
TTTGAAGGAACCCGAGACTA+GGG 0.543161 5_4:+2436161 Msa0829480:CDS
GAGCATTTGCTGGCTTCTTG+AGG 0.554417 5_4:+2437382 Msa0829480:CDS
ATCATTGGGCTCTCCAGTTG+CGG 0.561350 5_4:+2436065 Msa0829480:CDS
GTAGATGGTTATAAAGCAGA+TGG 0.564031 5_4:+2436570 Msa0829480:intron
GGAGAAAATTGACTCTCCGA+AGG 0.564727 5_4:+2435813 Msa0829480:CDS
TGAAGAATTTGCTGACACTC+TGG 0.569769 5_4:+2437651 Msa0829480:three_prime_UTR
TGCATATTCAGCCTTCTCCA+TGG 0.574962 5_4:+2436874 Msa0829480:CDS
AATATGACAGGTTAGTGGGT+TGG 0.579569 5_4:+2437770 Msa0829480:three_prime_UTR
TTGGAACTGGATCAGGACCA+TGG 0.582445 5_4:+2437526 Msa0829480:CDS
ATGAGTTTAGCAGCCACACC+AGG 0.586123 5_4:-2437813 None:intergenic
CCTATTCCTGAATCTACTAA+GGG 0.586895 5_4:+2436222 Msa0829480:CDS
GCAGTGAGTGTTGTGATGAC+AGG 0.590503 5_4:+2437586 Msa0829480:three_prime_UTR
GGTTATAAAGCAGATGGGCA+TGG 0.591391 5_4:+2436576 Msa0829480:CDS
GAAGTTGCATACCATGGAGA+AGG 0.592624 5_4:-2436885 None:intergenic
ATTTAATGGTGTCAACTTTG+GGG 0.595581 5_4:+2436841 Msa0829480:CDS
TGGAACTGGATCAGGACCAT+GGG 0.597595 5_4:+2437527 Msa0829480:CDS
CCGAGACTAGGGAATTTGAC+GGG 0.599319 5_4:+2436172 Msa0829480:CDS
TCTGCTGATTCAGTAAAGGA+GGG 0.600137 5_4:+2435943 Msa0829480:CDS
TCGGGATCCCAACTCTAATG+AGG 0.602731 5_4:-2436684 None:intergenic
AGTACAAGTCTTACCTGATG+AGG 0.612891 5_4:+2436122 Msa0829480:CDS
GTTGACACCATTAAATACAA+AGG 0.614677 5_4:-2436834 None:intergenic
TAGATGGTTATAAAGCAGAT+GGG 0.638630 5_4:+2436571 Msa0829480:intron
GTCTCTGAGATGCAAAGCGG+AGG 0.647789 5_4:+2436018 Msa0829480:CDS
TATGAGAGTCGAAAGAACAA+TGG 0.656718 5_4:+2435844 Msa0829480:CDS
AGTGTTGTGATGACAGGAGT+GGG 0.658768 5_4:+2437592 Msa0829480:three_prime_UTR
TAGCTCCTAAGGAATTCCCA+TGG 0.677278 5_4:-2437543 None:intergenic
AGTTTAGCAGCCACACCAGG+TGG 0.683789 5_4:-2437810 None:intergenic
GCTTTGCATCTCAGAGACAG+AGG 0.693404 5_4:-2436013 None:intergenic
GAGTGTTGTGATGACAGGAG+TGG 0.694439 5_4:+2437591 Msa0829480:three_prime_UTR
GAGAGTCGAAAGAACAATGG+CGG 0.699704 5_4:+2435847 Msa0829480:CDS
ACAAAGGCCAAACAGTTCAG+GGG 0.700393 5_4:-2436818 None:intergenic
TCTTGCTGTGAAGAGAAGTG+AGG 0.715533 5_4:+2436095 Msa0829480:CDS
AATTCCAATGAATCCACCAG+CGG 0.727441 5_4:-2437328 None:intergenic
TCTGTCTCTGAGATGCAAAG+CGG 0.729026 5_4:+2436015 Msa0829480:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GGGATTTATATATTTTAACA+TGG + chr5_4:2436528-2436547 Msa0829480:intron 20.0%
!!! TTTCAATGATTCTTTAAGAT+TGG - chr5_4:2436982-2437001 None:intergenic 20.0%
!!! AATTTTCTTCAATTTTTGAC+TGG + chr5_4:2437102-2437121 Msa0829480:intron 20.0%
!! AGTTAAGAATATACAATTAG+TGG + chr5_4:2437227-2437246 Msa0829480:intron 20.0%
!! AGAATATGAAACAAAACATT+AGG - chr5_4:2437433-2437452 None:intergenic 20.0%
!!! GGGATTTATATATTTTAACA+TGG + chr5_4:2436528-2436547 Msa0829480:intron 20.0%
!!! TTTCAATGATTCTTTAAGAT+TGG - chr5_4:2436982-2437001 None:intergenic 20.0%
!!! AATTTTCTTCAATTTTTGAC+TGG + chr5_4:2437102-2437121 Msa0829480:intron 20.0%
!! AGTTAAGAATATACAATTAG+TGG + chr5_4:2437227-2437246 Msa0829480:intron 20.0%
!! AGAATATGAAACAAAACATT+AGG - chr5_4:2437433-2437452 None:intergenic 20.0%
! AATTCTGCAACTGAATTATA+AGG - chr5_4:2435922-2435941 None:intergenic 25.0%
! TGATATACTAGAGAAATCAT+TGG + chr5_4:2436050-2436069 Msa0829480:intron 25.0%
! GATATACTAGAGAAATCATT+GGG + chr5_4:2436051-2436070 Msa0829480:intron 25.0%
!! TAGTAGATAAATTCAGGTTA+GGG + chr5_4:2436508-2436527 Msa0829480:intron 25.0%
!! TTTTATATGTGATGTGTAGA+TGG + chr5_4:2436555-2436574 Msa0829480:intron 25.0%
! TTTGAACGCGAATAAATTAT+CGG - chr5_4:2436706-2436725 None:intergenic 25.0%
!! TATTTAATGGTGTCAACTTT+GGG + chr5_4:2436840-2436859 Msa0829480:CDS 25.0%
! ATTAAAATATAGACTCACCA+TGG - chr5_4:2436954-2436973 None:intergenic 25.0%
! AATTAAATGTAACCACATGT+CGG - chr5_4:2437086-2437105 None:intergenic 25.0%
! TTAGTGGCATTATTTCATTA+TGG + chr5_4:2437243-2437262 Msa0829480:intron 25.0%
! TTATGGCATTCTTAATTCTT+AGG + chr5_4:2437260-2437279 Msa0829480:intron 25.0%
! TTGCTTAATATGAATATGAC+AGG + chr5_4:2437758-2437777 Msa0829480:three_prime_UTR 25.0%
! AATTCTGCAACTGAATTATA+AGG - chr5_4:2435922-2435941 None:intergenic 25.0%
! TGATATACTAGAGAAATCAT+TGG + chr5_4:2436050-2436069 Msa0829480:intron 25.0%
! GATATACTAGAGAAATCATT+GGG + chr5_4:2436051-2436070 Msa0829480:intron 25.0%
!! TAGTAGATAAATTCAGGTTA+GGG + chr5_4:2436508-2436527 Msa0829480:intron 25.0%
!! TTTTATATGTGATGTGTAGA+TGG + chr5_4:2436555-2436574 Msa0829480:intron 25.0%
! TTTGAACGCGAATAAATTAT+CGG - chr5_4:2436706-2436725 None:intergenic 25.0%
!! TATTTAATGGTGTCAACTTT+GGG + chr5_4:2436840-2436859 Msa0829480:CDS 25.0%
! ATTAAAATATAGACTCACCA+TGG - chr5_4:2436954-2436973 None:intergenic 25.0%
! AATTAAATGTAACCACATGT+CGG - chr5_4:2437086-2437105 None:intergenic 25.0%
! TTAGTGGCATTATTTCATTA+TGG + chr5_4:2437243-2437262 Msa0829480:intron 25.0%
! TTATGGCATTCTTAATTCTT+AGG + chr5_4:2437260-2437279 Msa0829480:intron 25.0%
! TTGCTTAATATGAATATGAC+AGG + chr5_4:2437758-2437777 Msa0829480:three_prime_UTR 25.0%
CTCTCATAATTCAAATCCTT+CGG - chr5_4:2435832-2435851 None:intergenic 30.0%
TCAAATGATGTGATTGAAAC+CGG + chr5_4:2435871-2435890 Msa0829480:CDS 30.0%
!!! ATTTTCTGCTGATTCAGTAA+AGG + chr5_4:2435939-2435958 Msa0829480:CDS 30.0%
!! AGTTTCTGATGATTTGGTTA+AGG + chr5_4:2435984-2436003 Msa0829480:CDS 30.0%
TGTTAGAATATCGAGTTTGA+AGG + chr5_4:2436146-2436165 Msa0829480:CDS 30.0%
! CTAGTAGATAAATTCAGGTT+AGG + chr5_4:2436507-2436526 Msa0829480:intron 30.0%
TAGATGGTTATAAAGCAGAT+GGG + chr5_4:2436571-2436590 Msa0829480:intron 30.0%
TTGAACGCGAATAAATTATC+GGG - chr5_4:2436705-2436724 None:intergenic 30.0%
TTCGCGTTCAAATTTAGAAA+AGG + chr5_4:2436714-2436733 Msa0829480:intron 30.0%
! TGTTTGGCCTTTGTATTTAA+TGG + chr5_4:2436827-2436846 Msa0829480:CDS 30.0%
GTTGACACCATTAAATACAA+AGG - chr5_4:2436837-2436856 None:intergenic 30.0%
! GTATTTAATGGTGTCAACTT+TGG + chr5_4:2436839-2436858 Msa0829480:CDS 30.0%
! ATTTAATGGTGTCAACTTTG+GGG + chr5_4:2436841-2436860 Msa0829480:CDS 30.0%
GATCAAAGCAGATTAAAACA+TGG - chr5_4:2436913-2436932 None:intergenic 30.0%
AAAACATTGTAGCAAAGGTT+TGG - chr5_4:2437184-2437203 None:intergenic 30.0%
GAAACAAAACATTGTAGCAA+AGG - chr5_4:2437189-2437208 None:intergenic 30.0%
TCAATGAACTATATTGATGC+AGG + chr5_4:2437502-2437521 Msa0829480:intron 30.0%
TCAATAACAATTAGCTCCTA+AGG - chr5_4:2437557-2437576 None:intergenic 30.0%
TTCACTAAGATGGAATCATT+CGG + chr5_4:2437622-2437641 Msa0829480:three_prime_UTR 30.0%
GATTCATAACTATTGTTTGC+TGG + chr5_4:2437690-2437709 Msa0829480:three_prime_UTR 30.0%
ATATGAATATGACAGGTTAG+TGG + chr5_4:2437765-2437784 Msa0829480:three_prime_UTR 30.0%
TATGAATATGACAGGTTAGT+GGG + chr5_4:2437766-2437785 Msa0829480:three_prime_UTR 30.0%
CTCTCATAATTCAAATCCTT+CGG - chr5_4:2435832-2435851 None:intergenic 30.0%
TCAAATGATGTGATTGAAAC+CGG + chr5_4:2435871-2435890 Msa0829480:CDS 30.0%
!!! ATTTTCTGCTGATTCAGTAA+AGG + chr5_4:2435939-2435958 Msa0829480:CDS 30.0%
!! AGTTTCTGATGATTTGGTTA+AGG + chr5_4:2435984-2436003 Msa0829480:CDS 30.0%
TGTTAGAATATCGAGTTTGA+AGG + chr5_4:2436146-2436165 Msa0829480:CDS 30.0%
! CTAGTAGATAAATTCAGGTT+AGG + chr5_4:2436507-2436526 Msa0829480:intron 30.0%
TAGATGGTTATAAAGCAGAT+GGG + chr5_4:2436571-2436590 Msa0829480:intron 30.0%
TTGAACGCGAATAAATTATC+GGG - chr5_4:2436705-2436724 None:intergenic 30.0%
TTCGCGTTCAAATTTAGAAA+AGG + chr5_4:2436714-2436733 Msa0829480:intron 30.0%
! TGTTTGGCCTTTGTATTTAA+TGG + chr5_4:2436827-2436846 Msa0829480:CDS 30.0%
GTTGACACCATTAAATACAA+AGG - chr5_4:2436837-2436856 None:intergenic 30.0%
! GTATTTAATGGTGTCAACTT+TGG + chr5_4:2436839-2436858 Msa0829480:CDS 30.0%
! ATTTAATGGTGTCAACTTTG+GGG + chr5_4:2436841-2436860 Msa0829480:CDS 30.0%
GATCAAAGCAGATTAAAACA+TGG - chr5_4:2436913-2436932 None:intergenic 30.0%
AAAACATTGTAGCAAAGGTT+TGG - chr5_4:2437184-2437203 None:intergenic 30.0%
GAAACAAAACATTGTAGCAA+AGG - chr5_4:2437189-2437208 None:intergenic 30.0%
TCAATGAACTATATTGATGC+AGG + chr5_4:2437502-2437521 Msa0829480:intron 30.0%
TCAATAACAATTAGCTCCTA+AGG - chr5_4:2437557-2437576 None:intergenic 30.0%
TTCACTAAGATGGAATCATT+CGG + chr5_4:2437622-2437641 Msa0829480:three_prime_UTR 30.0%
GATTCATAACTATTGTTTGC+TGG + chr5_4:2437690-2437709 Msa0829480:three_prime_UTR 30.0%
ATATGAATATGACAGGTTAG+TGG + chr5_4:2437765-2437784 Msa0829480:three_prime_UTR 30.0%
TATGAATATGACAGGTTAGT+GGG + chr5_4:2437766-2437785 Msa0829480:three_prime_UTR 30.0%
TATGAGAGTCGAAAGAACAA+TGG + chr5_4:2435844-2435863 Msa0829480:CDS 35.0%
!! TTTTGTGTTATTCGCAGTTC+CGG - chr5_4:2435893-2435912 None:intergenic 35.0%
TGCAGAAGTTTCTGATGATT+TGG + chr5_4:2435978-2435997 Msa0829480:CDS 35.0%
GATATTCTAACAACCTCATC+AGG - chr5_4:2436138-2436157 None:intergenic 35.0%
TCCTATTCCTGAATCTACTA+AGG + chr5_4:2436221-2436240 Msa0829480:CDS 35.0%
CCTATTCCTGAATCTACTAA+GGG + chr5_4:2436222-2436241 Msa0829480:CDS 35.0%
CTGAATTTATCTACTAGAGC+CGG - chr5_4:2436504-2436523 None:intergenic 35.0%
GTAGATGGTTATAAAGCAGA+TGG + chr5_4:2436570-2436589 Msa0829480:intron 35.0%
GTTGAGTAAATGCTACAAAC+TGG - chr5_4:2436799-2436818 None:intergenic 35.0%
! AACTTCATACTTGTTACTCG+AGG - chr5_4:2437211-2437230 None:intergenic 35.0%
!! TGGTGGATTCATTGGAATTT+GGG + chr5_4:2437332-2437351 Msa0829480:CDS 35.0%
GAACTATATTGATGCAGGAT+TGG + chr5_4:2437507-2437526 Msa0829480:intron 35.0%
GATTCCATCTTAGTGAAATC+TGG - chr5_4:2437619-2437638 None:intergenic 35.0%
TATGAGAGTCGAAAGAACAA+TGG + chr5_4:2435844-2435863 Msa0829480:CDS 35.0%
!! TTTTGTGTTATTCGCAGTTC+CGG - chr5_4:2435893-2435912 None:intergenic 35.0%
TGCAGAAGTTTCTGATGATT+TGG + chr5_4:2435978-2435997 Msa0829480:CDS 35.0%
GATATTCTAACAACCTCATC+AGG - chr5_4:2436138-2436157 None:intergenic 35.0%
TCCTATTCCTGAATCTACTA+AGG + chr5_4:2436221-2436240 Msa0829480:CDS 35.0%
CCTATTCCTGAATCTACTAA+GGG + chr5_4:2436222-2436241 Msa0829480:CDS 35.0%
CTGAATTTATCTACTAGAGC+CGG - chr5_4:2436504-2436523 None:intergenic 35.0%
GTAGATGGTTATAAAGCAGA+TGG + chr5_4:2436570-2436589 Msa0829480:intron 35.0%
GTTGAGTAAATGCTACAAAC+TGG - chr5_4:2436799-2436818 None:intergenic 35.0%
! AACTTCATACTTGTTACTCG+AGG - chr5_4:2437211-2437230 None:intergenic 35.0%
!! TGGTGGATTCATTGGAATTT+GGG + chr5_4:2437332-2437351 Msa0829480:CDS 35.0%
GAACTATATTGATGCAGGAT+TGG + chr5_4:2437507-2437526 Msa0829480:intron 35.0%
GATTCCATCTTAGTGAAATC+TGG - chr5_4:2437619-2437638 None:intergenic 35.0%
!! TTCTGCTGATTCAGTAAAGG+AGG + chr5_4:2435942-2435961 Msa0829480:CDS 40.0%
!! TCTGCTGATTCAGTAAAGGA+GGG + chr5_4:2435943-2435962 Msa0829480:CDS 40.0%
AGTACAAGTCTTACCTGATG+AGG + chr5_4:2436122-2436141 Msa0829480:CDS 40.0%
CCCTTAGTAGATTCAGGAAT+AGG - chr5_4:2436225-2436244 None:intergenic 40.0%
TCTACACCCTTAGTAGATTC+AGG - chr5_4:2436231-2436250 None:intergenic 40.0%
!! TGCAGAAAGCTCTGAAAATC+AGG + chr5_4:2436272-2436291 Msa0829480:CDS 40.0%
AATTATTTACATGCAGCCCC+CGG + chr5_4:2436415-2436434 Msa0829480:intron 40.0%
! CGGCTCTAGTAGATAAATTC+AGG + chr5_4:2436502-2436521 Msa0829480:intron 40.0%
TTGGCACTTGCATTCATTCT+TGG + chr5_4:2436607-2436626 Msa0829480:CDS 40.0%
CTTGCATTCATTCTTGGAAC+AGG + chr5_4:2436613-2436632 Msa0829480:CDS 40.0%
! TTTTCAACCCTCTCAAAGAG+TGG + chr5_4:2436747-2436766 Msa0829480:intron 40.0%
! GTAAGTTCCACTCTTTGAGA+GGG - chr5_4:2436757-2436776 None:intergenic 40.0%
TGTAAGTTCCACTCTTTGAG+AGG - chr5_4:2436758-2436777 None:intergenic 40.0%
TACAAAGGCCAAACAGTTCA+GGG - chr5_4:2436822-2436841 None:intergenic 40.0%
ATACAAAGGCCAAACAGTTC+AGG - chr5_4:2436823-2436842 None:intergenic 40.0%
ATGGATGAAGTTGCATACCA+TGG - chr5_4:2436894-2436913 None:intergenic 40.0%
TTTACTTTCAGCCTTCTCCA+TGG + chr5_4:2436934-2436953 Msa0829480:intron 40.0%
ATATAGACTCACCATGGAGA+AGG - chr5_4:2436948-2436967 None:intergenic 40.0%
TATAACGCACAAACAGACAC+CGG - chr5_4:2437150-2437169 None:intergenic 40.0%
!!! CTACTTATTTTGTCAACCGC+TGG + chr5_4:2437312-2437331 Msa0829480:CDS 40.0%
AATTCCAATGAATCCACCAG+CGG - chr5_4:2437331-2437350 None:intergenic 40.0%
!! CTGGTGGATTCATTGGAATT+TGG + chr5_4:2437331-2437350 Msa0829480:CDS 40.0%
!! ATGAGTCTAAGAGCATTTGC+TGG + chr5_4:2437372-2437391 Msa0829480:CDS 40.0%
TCCAAGACACTTGCAACATT+TGG + chr5_4:2437464-2437483 Msa0829480:intron 40.0%
TCCAAATGTTGCAAGTGTCT+TGG - chr5_4:2437468-2437487 None:intergenic 40.0%
TATTGATGCAGGATTGGAAC+TGG + chr5_4:2437513-2437532 Msa0829480:intron 40.0%
!! TGAAGAATTTGCTGACACTC+TGG + chr5_4:2437651-2437670 Msa0829480:three_prime_UTR 40.0%
! AATATGACAGGTTAGTGGGT+TGG + chr5_4:2437770-2437789 Msa0829480:three_prime_UTR 40.0%
!! TTCTGCTGATTCAGTAAAGG+AGG + chr5_4:2435942-2435961 Msa0829480:CDS 40.0%
!! TCTGCTGATTCAGTAAAGGA+GGG + chr5_4:2435943-2435962 Msa0829480:CDS 40.0%
AGTACAAGTCTTACCTGATG+AGG + chr5_4:2436122-2436141 Msa0829480:CDS 40.0%
CCCTTAGTAGATTCAGGAAT+AGG - chr5_4:2436225-2436244 None:intergenic 40.0%
TCTACACCCTTAGTAGATTC+AGG - chr5_4:2436231-2436250 None:intergenic 40.0%
!! TGCAGAAAGCTCTGAAAATC+AGG + chr5_4:2436272-2436291 Msa0829480:CDS 40.0%
AATTATTTACATGCAGCCCC+CGG + chr5_4:2436415-2436434 Msa0829480:intron 40.0%
! CGGCTCTAGTAGATAAATTC+AGG + chr5_4:2436502-2436521 Msa0829480:intron 40.0%
TTGGCACTTGCATTCATTCT+TGG + chr5_4:2436607-2436626 Msa0829480:CDS 40.0%
CTTGCATTCATTCTTGGAAC+AGG + chr5_4:2436613-2436632 Msa0829480:CDS 40.0%
! TTTTCAACCCTCTCAAAGAG+TGG + chr5_4:2436747-2436766 Msa0829480:intron 40.0%
! GTAAGTTCCACTCTTTGAGA+GGG - chr5_4:2436757-2436776 None:intergenic 40.0%
TGTAAGTTCCACTCTTTGAG+AGG - chr5_4:2436758-2436777 None:intergenic 40.0%
TACAAAGGCCAAACAGTTCA+GGG - chr5_4:2436822-2436841 None:intergenic 40.0%
ATACAAAGGCCAAACAGTTC+AGG - chr5_4:2436823-2436842 None:intergenic 40.0%
ATGGATGAAGTTGCATACCA+TGG - chr5_4:2436894-2436913 None:intergenic 40.0%
TTTACTTTCAGCCTTCTCCA+TGG + chr5_4:2436934-2436953 Msa0829480:intron 40.0%
ATATAGACTCACCATGGAGA+AGG - chr5_4:2436948-2436967 None:intergenic 40.0%
TATAACGCACAAACAGACAC+CGG - chr5_4:2437150-2437169 None:intergenic 40.0%
!!! CTACTTATTTTGTCAACCGC+TGG + chr5_4:2437312-2437331 Msa0829480:CDS 40.0%
AATTCCAATGAATCCACCAG+CGG - chr5_4:2437331-2437350 None:intergenic 40.0%
!! CTGGTGGATTCATTGGAATT+TGG + chr5_4:2437331-2437350 Msa0829480:CDS 40.0%
!! ATGAGTCTAAGAGCATTTGC+TGG + chr5_4:2437372-2437391 Msa0829480:CDS 40.0%
TCCAAGACACTTGCAACATT+TGG + chr5_4:2437464-2437483 Msa0829480:intron 40.0%
TCCAAATGTTGCAAGTGTCT+TGG - chr5_4:2437468-2437487 None:intergenic 40.0%
TATTGATGCAGGATTGGAAC+TGG + chr5_4:2437513-2437532 Msa0829480:intron 40.0%
!! TGAAGAATTTGCTGACACTC+TGG + chr5_4:2437651-2437670 Msa0829480:three_prime_UTR 40.0%
! AATATGACAGGTTAGTGGGT+TGG + chr5_4:2437770-2437789 Msa0829480:three_prime_UTR 40.0%
! GGAGAAAATTGACTCTCCGA+AGG + chr5_4:2435813-2435832 Msa0829480:CDS 45.0%
GAGAGTCGAAAGAACAATGG+CGG + chr5_4:2435847-2435866 Msa0829480:CDS 45.0%
!! TCTGTCTCTGAGATGCAAAG+CGG + chr5_4:2436015-2436034 Msa0829480:CDS 45.0%
! TCTTGCTGTGAAGAGAAGTG+AGG + chr5_4:2436095-2436114 Msa0829480:CDS 45.0%
TTTGAAGGAACCCGAGACTA+GGG + chr5_4:2436161-2436180 Msa0829480:CDS 45.0%
TTCAGAGCTTTCTGCAGCAT+TGG - chr5_4:2436268-2436287 None:intergenic 45.0%
GGCCTGTTTGATGTTCTATC+CGG + chr5_4:2436482-2436501 Msa0829480:intron 45.0%
AGCCGGATAGAACATCAAAC+AGG - chr5_4:2436487-2436506 None:intergenic 45.0%
GGTTATAAAGCAGATGGGCA+TGG + chr5_4:2436576-2436595 Msa0829480:CDS 45.0%
CTTGGAACAGGATTGCACTT+TGG + chr5_4:2436625-2436644 Msa0829480:CDS 45.0%
TCCTGCACCTCATTAGAGTT+GGG + chr5_4:2436677-2436696 Msa0829480:intron 45.0%
TACTCAACCCCTGAACTGTT+TGG + chr5_4:2436811-2436830 Msa0829480:CDS 45.0%
ACAAAGGCCAAACAGTTCAG+GGG - chr5_4:2436821-2436840 None:intergenic 45.0%
TGCATATTCAGCCTTCTCCA+TGG + chr5_4:2436874-2436893 Msa0829480:CDS 45.0%
GAAGTTGCATACCATGGAGA+AGG - chr5_4:2436888-2436907 None:intergenic 45.0%
ACGTCTTTGATGCGAAGTGT+CGG - chr5_4:2437031-2437050 None:intergenic 45.0%
CTTCGCATCAAAGACGTGTT+TGG + chr5_4:2437034-2437053 Msa0829480:intron 45.0%
!! CAACATGTCAGTGTCGTTTC+CGG + chr5_4:2437128-2437147 Msa0829480:intron 45.0%
GGTGTCTGTTTGTGCGTTAT+AGG + chr5_4:2437149-2437168 Msa0829480:intron 45.0%
!!! CTTATTTTGTCAACCGCTGG+TGG + chr5_4:2437315-2437334 Msa0829480:CDS 45.0%
TAGCTCCTAAGGAATTCCCA+TGG - chr5_4:2437546-2437565 None:intergenic 45.0%
AGTGTTGTGATGACAGGAGT+GGG + chr5_4:2437592-2437611 Msa0829480:three_prime_UTR 45.0%
GGGTCCAGATTTCACTAAGA+TGG + chr5_4:2437612-2437631 Msa0829480:three_prime_UTR 45.0%
AGAAGCTGGAAAAAACCACC+TGG + chr5_4:2437795-2437814 Msa0829480:three_prime_UTR 45.0%
! GGAGAAAATTGACTCTCCGA+AGG + chr5_4:2435813-2435832 Msa0829480:CDS 45.0%
GAGAGTCGAAAGAACAATGG+CGG + chr5_4:2435847-2435866 Msa0829480:CDS 45.0%
!! TCTGTCTCTGAGATGCAAAG+CGG + chr5_4:2436015-2436034 Msa0829480:CDS 45.0%
! TCTTGCTGTGAAGAGAAGTG+AGG + chr5_4:2436095-2436114 Msa0829480:CDS 45.0%
TTTGAAGGAACCCGAGACTA+GGG + chr5_4:2436161-2436180 Msa0829480:CDS 45.0%
TTCAGAGCTTTCTGCAGCAT+TGG - chr5_4:2436268-2436287 None:intergenic 45.0%
GGCCTGTTTGATGTTCTATC+CGG + chr5_4:2436482-2436501 Msa0829480:intron 45.0%
AGCCGGATAGAACATCAAAC+AGG - chr5_4:2436487-2436506 None:intergenic 45.0%
GGTTATAAAGCAGATGGGCA+TGG + chr5_4:2436576-2436595 Msa0829480:CDS 45.0%
CTTGGAACAGGATTGCACTT+TGG + chr5_4:2436625-2436644 Msa0829480:CDS 45.0%
TCCTGCACCTCATTAGAGTT+GGG + chr5_4:2436677-2436696 Msa0829480:intron 45.0%
TACTCAACCCCTGAACTGTT+TGG + chr5_4:2436811-2436830 Msa0829480:CDS 45.0%
ACAAAGGCCAAACAGTTCAG+GGG - chr5_4:2436821-2436840 None:intergenic 45.0%
TGCATATTCAGCCTTCTCCA+TGG + chr5_4:2436874-2436893 Msa0829480:CDS 45.0%
GAAGTTGCATACCATGGAGA+AGG - chr5_4:2436888-2436907 None:intergenic 45.0%
ACGTCTTTGATGCGAAGTGT+CGG - chr5_4:2437031-2437050 None:intergenic 45.0%
CTTCGCATCAAAGACGTGTT+TGG + chr5_4:2437034-2437053 Msa0829480:intron 45.0%
!! CAACATGTCAGTGTCGTTTC+CGG + chr5_4:2437128-2437147 Msa0829480:intron 45.0%
GGTGTCTGTTTGTGCGTTAT+AGG + chr5_4:2437149-2437168 Msa0829480:intron 45.0%
!!! CTTATTTTGTCAACCGCTGG+TGG + chr5_4:2437315-2437334 Msa0829480:CDS 45.0%
TAGCTCCTAAGGAATTCCCA+TGG - chr5_4:2437546-2437565 None:intergenic 45.0%
AGTGTTGTGATGACAGGAGT+GGG + chr5_4:2437592-2437611 Msa0829480:three_prime_UTR 45.0%
GGGTCCAGATTTCACTAAGA+TGG + chr5_4:2437612-2437631 Msa0829480:three_prime_UTR 45.0%
AGAAGCTGGAAAAAACCACC+TGG + chr5_4:2437795-2437814 Msa0829480:three_prime_UTR 45.0%
GCTTTGCATCTCAGAGACAG+AGG - chr5_4:2436016-2436035 None:intergenic 50.0%
ATCATTGGGCTCTCCAGTTG+CGG + chr5_4:2436065-2436084 Msa0829480:CDS 50.0%
GCAAGATCAGTTTCCGCAAC+TGG - chr5_4:2436081-2436100 None:intergenic 50.0%
GTTTGAAGGAACCCGAGACT+AGG + chr5_4:2436160-2436179 Msa0829480:CDS 50.0%
CCGTCAAATTCCCTAGTCTC+GGG - chr5_4:2436174-2436193 None:intergenic 50.0%
CCCGAGACTAGGGAATTTGA+CGG + chr5_4:2436171-2436190 Msa0829480:CDS 50.0%
CCCGTCAAATTCCCTAGTCT+CGG - chr5_4:2436175-2436194 None:intergenic 50.0%
CCGAGACTAGGGAATTTGAC+GGG + chr5_4:2436172-2436191 Msa0829480:CDS 50.0%
GACGTCTTATGCACCATAGG+CGG - chr5_4:2436446-2436465 None:intergenic 50.0%
CAGGACGTCTTATGCACCAT+AGG - chr5_4:2436449-2436468 None:intergenic 50.0%
CTATGGTGCATAAGACGTCC+TGG + chr5_4:2436447-2436466 Msa0829480:intron 50.0%
!! ACGTCCTGGTTGAGTTGATG+TGG + chr5_4:2436461-2436480 Msa0829480:intron 50.0%
AAGCAGATGGGCATGGTTCT+TGG + chr5_4:2436583-2436602 Msa0829480:CDS 50.0%
GATGGGCATGGTTCTTGGAT+TGG + chr5_4:2436588-2436607 Msa0829480:CDS 50.0%
GTCCTGCACCTCATTAGAGT+TGG + chr5_4:2436676-2436695 Msa0829480:intron 50.0%
TCCCAACTCTAATGAGGTGC+AGG - chr5_4:2436681-2436700 None:intergenic 50.0%
TCGGGATCCCAACTCTAATG+AGG - chr5_4:2436687-2436706 None:intergenic 50.0%
CGGAAACGACACTGACATGT+TGG - chr5_4:2437130-2437149 None:intergenic 50.0%
!! TCAACCGCTGGTGGATTCAT+TGG + chr5_4:2437324-2437343 Msa0829480:CDS 50.0%
!! GAGCATTTGCTGGCTTCTTG+AGG + chr5_4:2437382-2437401 Msa0829480:CDS 50.0%
TGCAGGATTGGAACTGGATC+AGG + chr5_4:2437519-2437538 Msa0829480:intron 50.0%
TTGGAACTGGATCAGGACCA+TGG + chr5_4:2437526-2437545 Msa0829480:CDS 50.0%
TGGAACTGGATCAGGACCAT+GGG + chr5_4:2437527-2437546 Msa0829480:CDS 50.0%
CAGGACCATGGGAATTCCTT+AGG + chr5_4:2437538-2437557 Msa0829480:CDS 50.0%
! GCAGTGAGTGTTGTGATGAC+AGG + chr5_4:2437586-2437605 Msa0829480:three_prime_UTR 50.0%
! GAGTGTTGTGATGACAGGAG+TGG + chr5_4:2437591-2437610 Msa0829480:three_prime_UTR 50.0%
!! TTAGTGGGTTGGACAGAAGC+TGG + chr5_4:2437781-2437800 Msa0829480:three_prime_UTR 50.0%
CTGGAAAAAACCACCTGGTG+TGG + chr5_4:2437800-2437819 Msa0829480:three_prime_UTR 50.0%
GCTTTGCATCTCAGAGACAG+AGG - chr5_4:2436016-2436035 None:intergenic 50.0%
ATCATTGGGCTCTCCAGTTG+CGG + chr5_4:2436065-2436084 Msa0829480:CDS 50.0%
GCAAGATCAGTTTCCGCAAC+TGG - chr5_4:2436081-2436100 None:intergenic 50.0%
GTTTGAAGGAACCCGAGACT+AGG + chr5_4:2436160-2436179 Msa0829480:CDS 50.0%
CCGTCAAATTCCCTAGTCTC+GGG - chr5_4:2436174-2436193 None:intergenic 50.0%
CCCGAGACTAGGGAATTTGA+CGG + chr5_4:2436171-2436190 Msa0829480:CDS 50.0%
CCCGTCAAATTCCCTAGTCT+CGG - chr5_4:2436175-2436194 None:intergenic 50.0%
CCGAGACTAGGGAATTTGAC+GGG + chr5_4:2436172-2436191 Msa0829480:CDS 50.0%
GACGTCTTATGCACCATAGG+CGG - chr5_4:2436446-2436465 None:intergenic 50.0%
CAGGACGTCTTATGCACCAT+AGG - chr5_4:2436449-2436468 None:intergenic 50.0%
CTATGGTGCATAAGACGTCC+TGG + chr5_4:2436447-2436466 Msa0829480:intron 50.0%
!! ACGTCCTGGTTGAGTTGATG+TGG + chr5_4:2436461-2436480 Msa0829480:intron 50.0%
AAGCAGATGGGCATGGTTCT+TGG + chr5_4:2436583-2436602 Msa0829480:CDS 50.0%
GATGGGCATGGTTCTTGGAT+TGG + chr5_4:2436588-2436607 Msa0829480:CDS 50.0%
GTCCTGCACCTCATTAGAGT+TGG + chr5_4:2436676-2436695 Msa0829480:intron 50.0%
TCCCAACTCTAATGAGGTGC+AGG - chr5_4:2436681-2436700 None:intergenic 50.0%
TCGGGATCCCAACTCTAATG+AGG - chr5_4:2436687-2436706 None:intergenic 50.0%
CGGAAACGACACTGACATGT+TGG - chr5_4:2437130-2437149 None:intergenic 50.0%
!! TCAACCGCTGGTGGATTCAT+TGG + chr5_4:2437324-2437343 Msa0829480:CDS 50.0%
!! GAGCATTTGCTGGCTTCTTG+AGG + chr5_4:2437382-2437401 Msa0829480:CDS 50.0%
TGCAGGATTGGAACTGGATC+AGG + chr5_4:2437519-2437538 Msa0829480:intron 50.0%
TTGGAACTGGATCAGGACCA+TGG + chr5_4:2437526-2437545 Msa0829480:CDS 50.0%
TGGAACTGGATCAGGACCAT+GGG + chr5_4:2437527-2437546 Msa0829480:CDS 50.0%
CAGGACCATGGGAATTCCTT+AGG + chr5_4:2437538-2437557 Msa0829480:CDS 50.0%
! GCAGTGAGTGTTGTGATGAC+AGG + chr5_4:2437586-2437605 Msa0829480:three_prime_UTR 50.0%
! GAGTGTTGTGATGACAGGAG+TGG + chr5_4:2437591-2437610 Msa0829480:three_prime_UTR 50.0%
!! TTAGTGGGTTGGACAGAAGC+TGG + chr5_4:2437781-2437800 Msa0829480:three_prime_UTR 50.0%
CTGGAAAAAACCACCTGGTG+TGG + chr5_4:2437800-2437819 Msa0829480:three_prime_UTR 50.0%
!! GTCTCTGAGATGCAAAGCGG+AGG + chr5_4:2436018-2436037 Msa0829480:CDS 55.0%
TGTGCGCTCGTTTGTGTGTC+AGG - chr5_4:2436313-2436332 None:intergenic 55.0%
CAGGCCACATCAACTCAACC+AGG - chr5_4:2436468-2436487 None:intergenic 55.0%
!! CCACATGTCGGTGTCGAACA+CGG - chr5_4:2437074-2437093 None:intergenic 55.0%
AGTTTAGCAGCCACACCAGG+TGG - chr5_4:2437813-2437832 None:intergenic 55.0%
!! GTCTCTGAGATGCAAAGCGG+AGG + chr5_4:2436018-2436037 Msa0829480:CDS 55.0%
TGTGCGCTCGTTTGTGTGTC+AGG - chr5_4:2436313-2436332 None:intergenic 55.0%
CAGGCCACATCAACTCAACC+AGG - chr5_4:2436468-2436487 None:intergenic 55.0%
!! CCACATGTCGGTGTCGAACA+CGG - chr5_4:2437074-2437093 None:intergenic 55.0%
AGTTTAGCAGCCACACCAGG+TGG - chr5_4:2437813-2437832 None:intergenic 55.0%
TGCACCATAGGCGGAGCTAC+CGG - chr5_4:2436437-2436456 None:intergenic 60.0%
CCGTGTTCGACACCGACATG+TGG + chr5_4:2437071-2437090 Msa0829480:intron 60.0%
TGCACCATAGGCGGAGCTAC+CGG - chr5_4:2436437-2436456 None:intergenic 60.0%
CCGTGTTCGACACCGACATG+TGG + chr5_4:2437071-2437090 Msa0829480:intron 60.0%
ACCATAGGCGGAGCTACCGG+GGG - chr5_4:2436434-2436453 None:intergenic 65.0%
CACCATAGGCGGAGCTACCG+GGG - chr5_4:2436435-2436454 None:intergenic 65.0%
GCACCATAGGCGGAGCTACC+GGG - chr5_4:2436436-2436455 None:intergenic 65.0%
ACCATAGGCGGAGCTACCGG+GGG - chr5_4:2436434-2436453 None:intergenic 65.0%
CACCATAGGCGGAGCTACCG+GGG - chr5_4:2436435-2436454 None:intergenic 65.0%
GCACCATAGGCGGAGCTACC+GGG - chr5_4:2436436-2436455 None:intergenic 65.0%
GCCCCCGGTAGCTCCGCCTA+TGG + chr5_4:2436430-2436449 Msa0829480:intron 75.0%
GCCCCCGGTAGCTCCGCCTA+TGG + chr5_4:2436430-2436449 Msa0829480:intron 75.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 2435793 2437833 2435793 ID=Msa0829480;Name=Msa0829480
chr5_4 mRNA 2435793 2437833 2435793 ID=Msa0829480-mRNA-1;Parent=Msa0829480;Name=Msa0829480-mRNA-1;_AED=0.20;_eAED=0.23;_QI=0|0.33|0.28|0.85|0.33|0.42|7|267|288
chr5_4 exon 2435793 2436039 2435793 ID=Msa0829480-mRNA-1:exon:828;Parent=Msa0829480-mRNA-1
chr5_4 exon 2436061 2436293 2436061 ID=Msa0829480-mRNA-1:exon:829;Parent=Msa0829480-mRNA-1
chr5_4 exon 2436431 2436436 2436431 ID=Msa0829480-mRNA-1:exon:830;Parent=Msa0829480-mRNA-1
chr5_4 exon 2436574 2436693 2436574 ID=Msa0829480-mRNA-1:exon:831;Parent=Msa0829480-mRNA-1
chr5_4 exon 2436800 2436895 2436800 ID=Msa0829480-mRNA-1:exon:832;Parent=Msa0829480-mRNA-1
chr5_4 exon 2437282 2437403 2437282 ID=Msa0829480-mRNA-1:exon:833;Parent=Msa0829480-mRNA-1
chr5_4 exon 2437524 2437833 2437524 ID=Msa0829480-mRNA-1:exon:834;Parent=Msa0829480-mRNA-1
chr5_4 CDS 2435793 2436039 2435793 ID=Msa0829480-mRNA-1:cds;Parent=Msa0829480-mRNA-1
chr5_4 CDS 2436061 2436293 2436061 ID=Msa0829480-mRNA-1:cds;Parent=Msa0829480-mRNA-1
chr5_4 CDS 2436431 2436436 2436431 ID=Msa0829480-mRNA-1:cds;Parent=Msa0829480-mRNA-1
chr5_4 CDS 2436574 2436693 2436574 ID=Msa0829480-mRNA-1:cds;Parent=Msa0829480-mRNA-1
chr5_4 CDS 2436800 2436895 2436800 ID=Msa0829480-mRNA-1:cds;Parent=Msa0829480-mRNA-1
chr5_4 CDS 2437282 2437403 2437282 ID=Msa0829480-mRNA-1:cds;Parent=Msa0829480-mRNA-1
chr5_4 CDS 2437524 2437566 2437524 ID=Msa0829480-mRNA-1:cds;Parent=Msa0829480-mRNA-1
chr5_4 three_prime_UTR 2437567 2437833 2437567 ID=Msa0829480-mRNA-1:three_prime_utr;Parent=Msa0829480-mRNA-1
Gene Sequence

>Msa0829480

ATGAAGTTTGAGGAGCGTTTGGAGAAAATTGACTCTCCGAAGGATTTGAATTATGAGAGTCGAAAGAACAATGGCGGTTCAAATGATGTGATTGAAACCGGAACTGCGAATAACACAAAAGATGAACCTTATAATTCAGTTGCAGAATTTTCTGCTGATTCAGTAAAGGAGGGTGATAATTCAGTTGCAGAAGTTTCTGATGATTTGGTTAAGGTTGTGACCTCTGTCTCTGAGATGCAAAGCGGAGAGAAATCATTGGGCTCTCCAGTTGCGGAAACTGATCTTGCTGTGAAGAGAAGTGAGGATAAAGTACAAGTCTTACCTGATGAGGTTGTTAGAATATCGAGTTTGAAGGAACCCGAGACTAGGGAATTTGACGGGAAAGTATCTTCGTCAGTGTCTCAAAGTCCTATTCCTGAATCTACTAAGGGTGTAGAAAATGTTAAAGATTCCAATGCTGCAGAAAGCTCTGAAAATCAGCCCCCGATGGTTATAAAGCAGATGGGCATGGTTCTTGGATTGGCACTTGCATTCATTCTTGGAACAGGATTGCACTTTGGAGCTAAACTATTTACAAAAGATGTTGATGTCCTGCACCTCATTAGATTTGTAGCATTTACTCAACCCCTGAACTGTTTGGCCTTTGTATTTAATGGTGTCAACTTTGGGGCATCTGATTTTGCATATTCAGCCTTCTCCATGGTTATAGTAGCAATTATTAGCATAATTTGTCTACTTATTTTGTCAACCGCTGGTGGATTCATTGGAATTTGGGTTGTTTTGACTATTTATATGAGTCTAAGAGCATTTGCTGGCTTCTTGAGGATTGGAACTGGATCAGGACCATGGGAATTCCTTAGGAGCTAA
Protein sequence

>Msa0829480

MKFEERLEKIDSPKDLNYESRKNNGGSNDVIETGTANNTKDEPYNSVAEFSADSVKEGDNSVAEVSDDLVKVVTSVSEMQSGEKSLGSPVAETDLAVKRSEDKVQVLPDEVVRISSLKEPETREFDGKVSSSVSQSPIPESTKGVENVKDSNAAESSENQPPMVIKQMGMVLGLALAFILGTGLHFGAKLFTKDVDVLHLIRFVAFTQPLNCLAFVFNGVNFGASDFAYSAFSMVIVAIISIICLLILSTAGGFIGIWVVLTIYMSLRAFAGFLRIGTGSGPWEFLRS*