Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0833720 | XP_003611304.2 | 97.778 | 540 | 12 | 0 | 1 | 540 | 1 | 540 | 0.0 | 1103 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0833720 | sp|Q39079|DNJ13_ARATH | 63.498 | 526 | 189 | 1 | 10 | 535 | 13 | 535 | 0.0 | 696 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0833720 | G7JW29 | 97.778 | 540 | 12 | 0 | 1 | 540 | 1 | 540 | 0.0 | 1103 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0795820 | Msa0833720 | 0.892368 | 1.693559e-74 | -8.615850e-47 |
Msa0833720 | Msa1132660 | 0.963817 | 1.493883e-122 | -8.615850e-47 |
Msa0580470 | Msa0833720 | 0.843170 | 1.651468e-58 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0833720 | MtrunA17_Chr5g0399201 | 97.778 | 540 | 12 | 0 | 1 | 540 | 1 | 540 | 0.0 | 1103 |
Msa0833720 | MtrunA17_Chr4g0040501 | 47.297 | 74 | 37 | 1 | 12 | 85 | 4 | 75 | 8.66e-16 | 79.0 |
Msa0833720 | MtrunA17_Chr2g0282761 | 46.753 | 77 | 39 | 1 | 12 | 88 | 4 | 78 | 9.82e-16 | 78.6 |
Msa0833720 | MtrunA17_Chr2g0282741 | 48.649 | 74 | 36 | 1 | 12 | 85 | 4 | 75 | 1.50e-15 | 78.2 |
Msa0833720 | MtrunA17_Chr4g0006391 | 47.297 | 74 | 37 | 1 | 12 | 85 | 4 | 75 | 4.58e-15 | 76.6 |
Msa0833720 | MtrunA17_Chr8g0334811 | 45.000 | 80 | 37 | 1 | 9 | 88 | 11 | 83 | 1.39e-14 | 75.9 |
Msa0833720 | MtrunA17_Chr1g0159491 | 45.333 | 75 | 38 | 1 | 12 | 86 | 6 | 77 | 3.76e-14 | 67.8 |
Msa0833720 | MtrunA17_Chr2g0324921 | 45.946 | 74 | 38 | 1 | 12 | 85 | 4 | 75 | 4.62e-14 | 73.6 |
Msa0833720 | MtrunA17_Chr5g0427221 | 43.662 | 71 | 37 | 1 | 11 | 81 | 47 | 114 | 1.40e-13 | 68.2 |
Msa0833720 | MtrunA17_Chr1g0209551 | 48.684 | 76 | 36 | 1 | 11 | 86 | 15 | 87 | 1.83e-13 | 72.4 |
Msa0833720 | MtrunA17_Chr7g0269841 | 48.000 | 75 | 36 | 2 | 11 | 85 | 25 | 96 | 2.24e-13 | 71.6 |
Msa0833720 | MtrunA17_Chr3g0123861 | 44.595 | 74 | 37 | 1 | 12 | 85 | 82 | 151 | 3.43e-13 | 71.6 |
Msa0833720 | MtrunA17_Chr5g0393371 | 45.977 | 87 | 38 | 3 | 12 | 97 | 6 | 84 | 3.55e-13 | 71.6 |
Msa0833720 | MtrunA17_Chr4g0021141 | 38.462 | 78 | 45 | 1 | 3 | 80 | 13 | 87 | 4.53e-13 | 66.6 |
Msa0833720 | MtrunA17_Chr3g0138471 | 43.243 | 74 | 40 | 1 | 12 | 85 | 4 | 75 | 9.09e-13 | 69.7 |
Msa0833720 | MtrunA17_Chr2g0278951 | 38.017 | 121 | 62 | 3 | 4 | 123 | 47 | 155 | 1.07e-12 | 66.6 |
Msa0833720 | MtrunA17_Chr2g0278961 | 37.719 | 114 | 58 | 3 | 4 | 116 | 47 | 148 | 1.15e-12 | 66.6 |
Msa0833720 | MtrunA17_Chr2g0333221 | 40.741 | 81 | 44 | 1 | 12 | 92 | 70 | 146 | 4.83e-12 | 68.2 |
Msa0833720 | MtrunA17_Chr6g0478651 | 42.667 | 75 | 39 | 1 | 11 | 85 | 67 | 137 | 6.04e-12 | 68.2 |
Msa0833720 | MtrunA17_Chr8g0344721 | 42.857 | 70 | 37 | 1 | 12 | 78 | 10 | 79 | 2.34e-11 | 63.9 |
Msa0833720 | MtrunA17_Chr4g0044331 | 46.667 | 60 | 31 | 1 | 19 | 77 | 19 | 78 | 9.08e-11 | 60.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0833720 | AT2G35720.1 | 63.498 | 526 | 189 | 1 | 10 | 535 | 13 | 535 | 0.0 | 696 |
Msa0833720 | AT3G47940.1 | 48.052 | 77 | 37 | 2 | 12 | 87 | 4 | 78 | 1.05e-16 | 82.0 |
Msa0833720 | AT1G59725.1 | 45.946 | 74 | 37 | 2 | 12 | 84 | 4 | 75 | 3.02e-16 | 80.5 |
Msa0833720 | AT4G28480.2 | 45.455 | 77 | 40 | 1 | 12 | 88 | 4 | 78 | 2.14e-15 | 77.4 |
Msa0833720 | AT2G20560.1 | 46.753 | 77 | 39 | 1 | 12 | 88 | 4 | 78 | 2.90e-15 | 77.8 |
Msa0833720 | AT1G10350.1 | 44.000 | 75 | 40 | 1 | 12 | 86 | 4 | 76 | 3.72e-15 | 77.4 |
Msa0833720 | AT4G28480.1 | 45.455 | 77 | 40 | 1 | 12 | 88 | 4 | 78 | 4.46e-15 | 77.4 |
Msa0833720 | AT5G01390.3 | 45.205 | 73 | 38 | 1 | 12 | 84 | 4 | 74 | 5.08e-15 | 75.1 |
Msa0833720 | AT5G01390.4 | 45.205 | 73 | 38 | 1 | 12 | 84 | 4 | 74 | 6.88e-15 | 74.7 |
Msa0833720 | AT5G01390.2 | 45.205 | 73 | 38 | 1 | 12 | 84 | 4 | 74 | 9.19e-15 | 75.1 |
Msa0833720 | AT3G08910.1 | 45.333 | 75 | 39 | 1 | 12 | 86 | 4 | 76 | 1.05e-14 | 75.9 |
Msa0833720 | AT5G25530.2 | 44.444 | 81 | 43 | 1 | 12 | 92 | 4 | 82 | 1.31e-14 | 75.9 |
Msa0833720 | AT5G01390.1 | 45.205 | 73 | 38 | 1 | 12 | 84 | 4 | 74 | 1.58e-14 | 75.5 |
Msa0833720 | AT2G33735.1 | 42.857 | 70 | 37 | 1 | 8 | 77 | 18 | 84 | 8.52e-14 | 68.6 |
Msa0833720 | AT2G33735.2 | 42.857 | 70 | 37 | 1 | 8 | 77 | 18 | 84 | 8.52e-14 | 68.6 |
Msa0833720 | AT1G80030.4 | 45.333 | 75 | 37 | 1 | 12 | 86 | 75 | 145 | 7.27e-13 | 71.2 |
Msa0833720 | AT1G80030.2 | 45.333 | 75 | 37 | 1 | 12 | 86 | 75 | 145 | 7.66e-13 | 71.2 |
Msa0833720 | AT1G80030.3 | 45.333 | 75 | 37 | 1 | 12 | 86 | 75 | 145 | 7.66e-13 | 71.2 |
Msa0833720 | AT1G80030.1 | 45.333 | 75 | 37 | 1 | 12 | 86 | 75 | 145 | 7.66e-13 | 71.2 |
Msa0833720 | AT5G16650.1 | 41.250 | 80 | 44 | 1 | 2 | 81 | 1 | 77 | 9.66e-13 | 65.9 |
Msa0833720 | AT3G62600.1 | 45.333 | 75 | 38 | 1 | 11 | 85 | 25 | 96 | 1.12e-12 | 69.7 |
Msa0833720 | AT3G14200.1 | 43.590 | 78 | 44 | 0 | 1 | 78 | 1 | 78 | 1.53e-12 | 67.8 |
Msa0833720 | AT2G21510.3 | 50.000 | 74 | 34 | 2 | 12 | 85 | 6 | 76 | 2.35e-12 | 68.9 |
Msa0833720 | AT2G21510.1 | 50.000 | 74 | 34 | 2 | 12 | 85 | 6 | 76 | 2.35e-12 | 68.9 |
Msa0833720 | AT2G21510.2 | 50.000 | 74 | 34 | 2 | 12 | 85 | 6 | 76 | 2.63e-12 | 68.9 |
Msa0833720 | AT2G21510.4 | 50.000 | 74 | 34 | 2 | 12 | 85 | 6 | 76 | 2.63e-12 | 68.9 |
Msa0833720 | AT2G21510.5 | 50.000 | 74 | 34 | 2 | 12 | 85 | 6 | 76 | 3.51e-12 | 68.2 |
Msa0833720 | AT5G16650.2 | 41.250 | 80 | 44 | 1 | 2 | 81 | 1 | 77 | 3.53e-12 | 65.5 |
Msa0833720 | AT2G22360.1 | 39.506 | 81 | 45 | 1 | 12 | 92 | 86 | 162 | 3.86e-12 | 68.9 |
Msa0833720 | AT4G39960.1 | 42.857 | 77 | 38 | 2 | 10 | 85 | 83 | 154 | 4.48e-12 | 68.6 |
Msa0833720 | AT4G39960.2 | 42.857 | 77 | 38 | 2 | 10 | 85 | 83 | 154 | 4.48e-12 | 68.6 |
Msa0833720 | AT1G68370.1 | 43.210 | 81 | 42 | 2 | 11 | 90 | 16 | 93 | 8.03e-12 | 67.8 |
Msa0833720 | AT1G59980.2 | 43.210 | 81 | 43 | 2 | 4 | 84 | 15 | 92 | 1.18e-11 | 67.0 |
Msa0833720 | AT1G21080.1 | 45.455 | 77 | 39 | 2 | 12 | 88 | 6 | 79 | 1.66e-11 | 66.6 |
Msa0833720 | AT1G21080.3 | 45.455 | 77 | 39 | 2 | 12 | 88 | 6 | 79 | 1.69e-11 | 66.6 |
Msa0833720 | AT1G59980.1 | 43.210 | 81 | 43 | 2 | 4 | 84 | 15 | 92 | 1.71e-11 | 66.6 |
Msa0833720 | AT4G39150.3 | 48.649 | 74 | 35 | 2 | 12 | 85 | 6 | 76 | 6.19e-11 | 64.7 |
Msa0833720 | AT4G39150.1 | 48.649 | 74 | 35 | 2 | 12 | 85 | 6 | 76 | 6.19e-11 | 64.7 |
Msa0833720 | AT4G39150.2 | 48.649 | 74 | 35 | 2 | 12 | 85 | 6 | 76 | 6.19e-11 | 64.7 |
Msa0833720 | AT1G72416.2 | 35.443 | 79 | 49 | 1 | 12 | 88 | 5 | 83 | 8.66e-11 | 61.6 |
Msa0833720 | AT1G72416.1 | 35.443 | 79 | 49 | 1 | 12 | 88 | 5 | 83 | 9.00e-11 | 61.6 |
Msa0833720 | AT1G72416.4 | 35.443 | 79 | 49 | 1 | 12 | 88 | 5 | 83 | 9.34e-11 | 61.6 |
Find 168 sgRNAs with CRISPR-Local
Find 730 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTGTGAATGGCGAGGGTTTA+AGG | 0.122656 | 5_4:-6812001 | None:intergenic |
AGACAGGTTTATGATATTTA+TGG | 0.168325 | 5_4:+6812300 | Msa0833720:CDS |
TGGAGAATTTGAGGGTTATT+AGG | 0.204186 | 5_4:-6812038 | None:intergenic |
GCCGGTTTACGTTCACTAAT+TGG | 0.209362 | 5_4:+6813730 | Msa0833720:CDS |
TCAATCTTCCGGGACGATTT+TGG | 0.212595 | 5_4:+6812443 | Msa0833720:CDS |
CATCTTTCATGAGAGGATTT+TGG | 0.213944 | 5_4:-6812215 | None:intergenic |
GCCCTGCAAATGATGAAATA+AGG | 0.217665 | 5_4:+6822148 | Msa0833720:three_prime_UTR |
TTAAACCGTATTACCTTAAA+AGG | 0.228193 | 5_4:+6818694 | Msa0833720:CDS |
GGCTGCATTGGAGGAAGATT+TGG | 0.245321 | 5_4:+6814871 | Msa0833720:CDS |
TGCAACCAATGAACAATAAA+AGG | 0.255425 | 5_4:-6822261 | None:intergenic |
GTCCACTCTCTTCTCTTCCT+TGG | 0.268936 | 5_4:-6811915 | None:intergenic |
CCAGCGCACAGTACTGAATT+TGG | 0.281518 | 5_4:-6816241 | None:intergenic |
GATTTCTTCGTCGGAGGATT+CGG | 0.296432 | 5_4:-6812145 | None:intergenic |
TTTCATTTAAGGTTTGTTAT+TGG | 0.305907 | 5_4:+6822327 | Msa0833720:three_prime_UTR |
GGAGAATTTGAGGGTTATTA+GGG | 0.310172 | 5_4:-6812037 | None:intergenic |
TGGGCAAGAATGAACTTATA+TGG | 0.332265 | 5_4:-6822293 | None:intergenic |
TAAGTGCCTTGGCTGATAAA+AGG | 0.346620 | 5_4:-6822432 | None:intergenic |
TGTGAATGGCGAGGGTTTAA+GGG | 0.347573 | 5_4:-6812000 | None:intergenic |
GATGGTGACGGTCTCTTTAG+AGG | 0.353128 | 5_4:+6812492 | Msa0833720:CDS |
GGTATGGAAGGGTTGAAATC+TGG | 0.361874 | 5_4:+6812321 | Msa0833720:CDS |
TTTATATCCTGTGGATGCCC+TGG | 0.364969 | 5_4:-6821952 | None:intergenic |
AACAACTTGTATTCGTCAAA+TGG | 0.369969 | 5_4:+6820059 | Msa0833720:CDS |
TTGAAATCTGGTTTGGAACT+TGG | 0.377143 | 5_4:+6812333 | Msa0833720:CDS |
TCATAAACCTGTCTCTTATT+CGG | 0.380932 | 5_4:-6812291 | None:intergenic |
TCCAATTAGTGAACGTAAAC+CGG | 0.384708 | 5_4:-6813731 | None:intergenic |
TAATGATTCTGGTCAACTTA+AGG | 0.387282 | 5_4:+6820142 | Msa0833720:CDS |
TGGAGAGGTTGAAGAGAAGA+AGG | 0.387919 | 5_4:+6812394 | Msa0833720:CDS |
GCCCTTATTTCATCATTTGC+AGG | 0.390253 | 5_4:-6822150 | None:intergenic |
TACAACAAAATGTAGCTAAT+AGG | 0.392977 | 5_4:+6819964 | Msa0833720:CDS |
ATTTCTTCGTCGGAGGATTC+GGG | 0.394666 | 5_4:-6812144 | None:intergenic |
GCTGCATTGGAGGAAGATTT+GGG | 0.396220 | 5_4:+6814872 | Msa0833720:CDS |
TCCGCAAAGCTTATCGTCAA+TGG | 0.396259 | 5_4:+6812166 | Msa0833720:CDS |
GTTGTATGTAGTAGGACTTC+AGG | 0.398493 | 5_4:+6816263 | Msa0833720:CDS |
CCCATTGACGATAAGCTTTG+CGG | 0.402719 | 5_4:-6812167 | None:intergenic |
GGAAGGGTTGAAATCTGGTT+TGG | 0.404746 | 5_4:+6812326 | Msa0833720:CDS |
TAAATGAAAATTACAGCCAT+TGG | 0.405863 | 5_4:-6822313 | None:intergenic |
TTATATCCTGTGGATGCCCT+GGG | 0.405887 | 5_4:-6821951 | None:intergenic |
CATTTGTTGTTTCTGACAGC+TGG | 0.407604 | 5_4:-6813947 | None:intergenic |
CACGAAGGTGTAAAGAAATC+AGG | 0.413837 | 5_4:+6821716 | Msa0833720:CDS |
TAATACCTTGTGTTGATTGC+CGG | 0.416603 | 5_4:-6821804 | None:intergenic |
CGAAATGTTGTTGGGATTGG+CGG | 0.418527 | 5_4:+6813610 | Msa0833720:CDS |
TGTAAAGAAATCAGGAATCA+TGG | 0.420936 | 5_4:+6821724 | Msa0833720:CDS |
AGGATTCGGGTGAGAGGTTG+AGG | 0.426031 | 5_4:-6812131 | None:intergenic |
CCCTGCAAATGATGAAATAA+GGG | 0.427287 | 5_4:+6822149 | Msa0833720:three_prime_UTR |
TTGAACCCTATGTTTGCTAC+TGG | 0.427445 | 5_4:+6818003 | Msa0833720:CDS |
TACAACAGTTTAGTTTCTCC+TGG | 0.432887 | 5_4:-6821764 | None:intergenic |
TGTCAAAACGAAATGTTGTT+GGG | 0.434109 | 5_4:+6813602 | Msa0833720:CDS |
AAAACATCCACAAGGTATCT+TGG | 0.434823 | 5_4:-6811937 | None:intergenic |
GTTGTTATGAAAGCGCTATA+TGG | 0.436734 | 5_4:+6820020 | Msa0833720:CDS |
AAATCTCATGGCTGCATTGG+AGG | 0.439365 | 5_4:+6814862 | Msa0833720:CDS |
CGTTGAATCTTTCTAATGCA+TGG | 0.443709 | 5_4:+6813919 | Msa0833720:CDS |
TGAAGGTAGTGGAGAATTTG+AGG | 0.443920 | 5_4:-6812047 | None:intergenic |
AAATGAAAATTACAGCCATT+GGG | 0.452490 | 5_4:-6822312 | None:intergenic |
TTGTCAAAACGAAATGTTGT+TGG | 0.453469 | 5_4:+6813601 | Msa0833720:CDS |
GCCTGAAAATTGTAGCTTGA+AGG | 0.454345 | 5_4:-6822079 | None:intergenic |
CAAAATTGTGGTACAGCAGC+AGG | 0.456849 | 5_4:-6822229 | None:intergenic |
GGCGGCAATTTAGCAGTTGA+AGG | 0.457018 | 5_4:+6813628 | Msa0833720:CDS |
AAGAAGGGAACATGAGAAGA+TGG | 0.457897 | 5_4:+6812410 | Msa0833720:CDS |
CTGGTTTGGAACTTGGTTCG+AGG | 0.462985 | 5_4:+6812340 | Msa0833720:CDS |
AAACGAAATGTTGTTGGGAT+TGG | 0.467280 | 5_4:+6813607 | Msa0833720:CDS |
AAGAATGAACTTATATGGTT+GGG | 0.469538 | 5_4:-6822288 | None:intergenic |
GGTTTATGATATTTATGGTA+TGG | 0.473781 | 5_4:+6812305 | Msa0833720:CDS |
GAAGGTAGTGGAGAATTTGA+GGG | 0.476111 | 5_4:-6812046 | None:intergenic |
AAGAAACAAGCAATTAGAAA+CGG | 0.479082 | 5_4:+6819989 | Msa0833720:CDS |
CAATCGCATCATCCCAATGA+TGG | 0.480172 | 5_4:+6812068 | Msa0833720:exon |
TCTAAATCTCATGGCTGCAT+TGG | 0.480181 | 5_4:+6814859 | Msa0833720:CDS |
AGAAACAAGCAATTAGAAAC+GGG | 0.485283 | 5_4:+6819990 | Msa0833720:CDS |
ACGGCACTCGATGTTATTAC+CGG | 0.487856 | 5_4:-6822380 | None:intergenic |
TTCAGATCCGAATAAGAGAC+AGG | 0.488853 | 5_4:+6812284 | Msa0833720:CDS |
CAAGAATGAACTTATATGGT+TGG | 0.490807 | 5_4:-6822289 | None:intergenic |
CCGCAAAGCTTATCGTCAAT+GGG | 0.491774 | 5_4:+6812167 | Msa0833720:CDS |
TAATATTTCTTTATATCCTG+TGG | 0.491894 | 5_4:-6821961 | None:intergenic |
TTTCAGATACAACTCATGTT+GGG | 0.497567 | 5_4:+6814482 | Msa0833720:intron |
TGTTGTTTCTGACAGCTGGC+GGG | 0.500265 | 5_4:-6813943 | None:intergenic |
CATTGGGATGATGCGATTGA+AGG | 0.501590 | 5_4:-6812064 | None:intergenic |
TCTTCCATTGAGATGGAAGT+TGG | 0.502607 | 5_4:+6816201 | Msa0833720:CDS |
AGCTTTGCGGATTTCTTCGT+CGG | 0.502755 | 5_4:-6812154 | None:intergenic |
GGAAGAAAGAAGACGAGAAA+AGG | 0.504085 | 5_4:+6814531 | Msa0833720:CDS |
TTAACAATGTCTTTGAGAGA+TGG | 0.505493 | 5_4:+6813894 | Msa0833720:CDS |
CCCTTATTTCATCATTTGCA+GGG | 0.506393 | 5_4:-6822149 | None:intergenic |
TCTGTGCCGCAGTATTTAGA+TGG | 0.507210 | 5_4:+6812474 | Msa0833720:CDS |
GCAATTAGAAACGGGTGGAC+TGG | 0.509279 | 5_4:+6819998 | Msa0833720:CDS |
TTTGGAACTTGGTTCGAGGT+TGG | 0.509566 | 5_4:+6812344 | Msa0833720:CDS |
ACCACCAACTTCCATCTCAA+TGG | 0.513249 | 5_4:-6816205 | None:intergenic |
AGAACAAAGTAAAACGATGC+TGG | 0.514699 | 5_4:-6818039 | None:intergenic |
CAAGAAGTGACAATAACAAC+CGG | 0.521357 | 5_4:+6822361 | Msa0833720:three_prime_UTR |
GGAGAGGTTGAAGAGAAGAA+GGG | 0.521692 | 5_4:+6812395 | Msa0833720:CDS |
TGGAGATTTGAATTCTGTCG+TGG | 0.521929 | 5_4:+6817183 | Msa0833720:CDS |
TATGATATTTATGGTATGGA+AGG | 0.522267 | 5_4:+6812309 | Msa0833720:CDS |
TGTAAACAAGGCAAAACTGC+AGG | 0.526095 | 5_4:-6822009 | None:intergenic |
ATTTCAGATACAACTCATGT+TGG | 0.526912 | 5_4:+6814481 | Msa0833720:intron |
TCTTCTCTTCCTTGGAGAGT+AGG | 0.529264 | 5_4:-6811907 | None:intergenic |
CAACTCCTTTAGCTCGGCAC+AGG | 0.529594 | 5_4:+6814796 | Msa0833720:intron |
GGAGATTTGAATTCTGTCGT+GGG | 0.529795 | 5_4:+6817184 | Msa0833720:CDS |
AGATTAAAGCCGAGTTGGAG+AGG | 0.534621 | 5_4:+6812379 | Msa0833720:CDS |
GTAAAGAAATCAGGAATCAT+GGG | 0.535679 | 5_4:+6821725 | Msa0833720:CDS |
ACGACAGAATTCAAATCTCC+AGG | 0.537158 | 5_4:-6817181 | None:intergenic |
TCCATTGAGATGGAAGTTGG+TGG | 0.539674 | 5_4:+6816204 | Msa0833720:CDS |
ATAGAATTTATTGCTTCAGC+CGG | 0.541957 | 5_4:+6813712 | Msa0833720:CDS |
TCTCTTCAACCTCTCCAACT+CGG | 0.543108 | 5_4:-6812388 | None:intergenic |
TTGTTGTTTCTGACAGCTGG+CGG | 0.544720 | 5_4:-6813944 | None:intergenic |
ATGATATTTATGGTATGGAA+GGG | 0.544799 | 5_4:+6812310 | Msa0833720:CDS |
CCAAATTCAGTACTGTGCGC+TGG | 0.546174 | 5_4:+6816241 | Msa0833720:CDS |
TGAAGAGATTAAAGCCGAGT+TGG | 0.546959 | 5_4:+6812374 | Msa0833720:CDS |
ATTAAGTCATCAACTTTCTG+AGG | 0.548247 | 5_4:+6813681 | Msa0833720:CDS |
TCACAACCATCTGTAGCTGT+AGG | 0.549045 | 5_4:+6814506 | Msa0833720:CDS |
CAGCTGTCAGAAACAACAAA+TGG | 0.555163 | 5_4:+6813948 | Msa0833720:CDS |
GTTGAAGGACATCAAGGTGG+TGG | 0.555707 | 5_4:+6813643 | Msa0833720:CDS |
TTGCCTTGTTTACATACTTG+AGG | 0.556004 | 5_4:+6822018 | Msa0833720:three_prime_UTR |
GACTGCCACTGCAGATGTGA+AGG | 0.563742 | 5_4:+6814553 | Msa0833720:CDS |
TCACACTCATCTGCAACAGC+AGG | 0.565108 | 5_4:+6813870 | Msa0833720:CDS |
GCAGAAGGCTCTAGAGAAGG+AGG | 0.565595 | 5_4:+6818722 | Msa0833720:CDS |
TTAGCAGTTGAAGGACATCA+AGG | 0.567675 | 5_4:+6813637 | Msa0833720:CDS |
ATAAGTTCATTCTTGCCCAA+TGG | 0.570627 | 5_4:+6822297 | Msa0833720:three_prime_UTR |
TTGTGCAGGTTCAAGAAGCA+AGG | 0.572071 | 5_4:+6819916 | Msa0833720:intron |
AGTTTAGTTTCTCCTGGACA+AGG | 0.572083 | 5_4:-6821758 | None:intergenic |
CACAACCATCTGTAGCTGTA+GGG | 0.573415 | 5_4:+6814507 | Msa0833720:CDS |
GGCGAGGGTTTAAGGGTGAA+AGG | 0.578504 | 5_4:-6811993 | None:intergenic |
TTCCACCCTACAGCTACAGA+TGG | 0.578527 | 5_4:-6814512 | None:intergenic |
ATGGTGACGGTCTCTTTAGA+GGG | 0.579960 | 5_4:+6812493 | Msa0833720:CDS |
AGATGGAAGTTGGTGGTGGA+AGG | 0.580738 | 5_4:+6816211 | Msa0833720:CDS |
CAGAGAAATTGTGAATGGCG+AGG | 0.582893 | 5_4:-6812009 | None:intergenic |
ATTGAGATGGAAGTTGGTGG+TGG | 0.583627 | 5_4:+6816207 | Msa0833720:CDS |
AGAGAAATTGTGAATGGCGA+GGG | 0.585703 | 5_4:-6812008 | None:intergenic |
TTTGCGGATTTCTTCGTCGG+AGG | 0.586012 | 5_4:-6812151 | None:intergenic |
CAACGTTGTCCTACTCTCCA+AGG | 0.588842 | 5_4:+6811898 | Msa0833720:five_prime_UTR |
GTGCGCTGGTTGTATGTAGT+AGG | 0.589823 | 5_4:+6816255 | Msa0833720:CDS |
CATTTGCAGGGCGTAACAGA+AGG | 0.590996 | 5_4:-6822137 | None:intergenic |
CGTCGGAGGATTCGGGTGAG+AGG | 0.591705 | 5_4:-6812137 | None:intergenic |
GAGATTTGAATTCTGTCGTG+GGG | 0.593603 | 5_4:+6817185 | Msa0833720:CDS |
TATGTAGAGTACGCTCATGC+CGG | 0.594747 | 5_4:+6821785 | Msa0833720:CDS |
AACGCTCCAGTAGCAAACAT+AGG | 0.595428 | 5_4:-6818009 | None:intergenic |
CCGCAGTATTTAGATGGTGA+CGG | 0.596124 | 5_4:+6812480 | Msa0833720:CDS |
ACGCTCCAGTAGCAAACATA+GGG | 0.598281 | 5_4:-6818008 | None:intergenic |
GTGGCAGCATCTTTCATGAG+AGG | 0.598579 | 5_4:-6812222 | None:intergenic |
TGATACCCCAGGGCATCCAC+AGG | 0.599069 | 5_4:+6821945 | Msa0833720:CDS |
CAAATTAGCCAAAATCGTCC+CGG | 0.603920 | 5_4:-6812451 | None:intergenic |
AACCATCTGTAGCTGTAGGG+TGG | 0.613280 | 5_4:+6814510 | Msa0833720:CDS |
TAAGCAGAAGGCTCTAGAGA+AGG | 0.614702 | 5_4:+6818719 | Msa0833720:CDS |
CCTTAAAAGGAATAAGCAGA+AGG | 0.619877 | 5_4:+6818707 | Msa0833720:CDS |
TGAACAATTAGTGATACCCC+AGG | 0.624180 | 5_4:+6821934 | Msa0833720:CDS |
AGGAACATCACACAAAATTG+TGG | 0.626070 | 5_4:-6822241 | None:intergenic |
GATGATGCGATTGAAGGTAG+TGG | 0.628517 | 5_4:-6812058 | None:intergenic |
CTCCAAGGAAGAGAAGAGAG+TGG | 0.638400 | 5_4:+6811913 | Msa0833720:five_prime_UTR |
TGTGCAGGTTCAAGAAGCAA+GGG | 0.640879 | 5_4:+6819917 | Msa0833720:intron |
TTACCTCAAGTATGTAAACA+AGG | 0.641730 | 5_4:-6822021 | None:intergenic |
TACCGAGCTGATGTCTCGAA+AGG | 0.642389 | 5_4:-6814820 | None:intergenic |
TAATTGGAGTGCAGACATCA+CGG | 0.643892 | 5_4:+6813746 | Msa0833720:CDS |
AACAAGCAATTAGAAACGGG+TGG | 0.644799 | 5_4:+6819993 | Msa0833720:CDS |
GAGTGGACCAAGATACCTTG+TGG | 0.647070 | 5_4:+6811930 | Msa0833720:five_prime_UTR |
GTAAACAAGGCAAAACTGCA+GGG | 0.654050 | 5_4:-6822008 | None:intergenic |
AAGTACCTTCACATCTGCAG+TGG | 0.655070 | 5_4:-6814558 | None:intergenic |
ACTGTTAGATGGAATGCAAG+AGG | 0.659226 | 5_4:+6822054 | Msa0833720:three_prime_UTR |
CAGAAGGCTCTAGAGAAGGA+GGG | 0.666625 | 5_4:+6818723 | Msa0833720:CDS |
AAAATTGTGGTACAGCAGCA+GGG | 0.669364 | 5_4:-6822228 | None:intergenic |
TCATGCCGGCAATCAACACA+AGG | 0.679169 | 5_4:+6821799 | Msa0833720:CDS |
TATATCCTGTGGATGCCCTG+GGG | 0.680955 | 5_4:-6821950 | None:intergenic |
GTCCTTTCGAGACATCAGCT+CGG | 0.682396 | 5_4:+6814818 | Msa0833720:CDS |
TCCCAAACAAAACATCCACA+AGG | 0.691678 | 5_4:-6811945 | None:intergenic |
AAGGGAACATGAGAAGATGG+TGG | 0.692220 | 5_4:+6812413 | Msa0833720:CDS |
AGATTTGAATTCTGTCGTGG+GGG | 0.694309 | 5_4:+6817186 | Msa0833720:CDS |
TCATTAACTAGAAAATTCAG+AGG | 0.697331 | 5_4:-6820125 | None:intergenic |
GAACAATTAGTGATACCCCA+GGG | 0.697876 | 5_4:+6821935 | Msa0833720:CDS |
GCAGTTGAAGGACATCAAGG+TGG | 0.714956 | 5_4:+6813640 | Msa0833720:CDS |
TTGTTGATGCAGCTTCACGA+AGG | 0.717990 | 5_4:+6821701 | Msa0833720:intron |
AACTCGTTGAAAATTCTCAG+TGG | 0.720687 | 5_4:-6812241 | None:intergenic |
GCATTGGAGGAAGATTTGGG+AGG | 0.723138 | 5_4:+6814875 | Msa0833720:CDS |
CCGTCACCATCTAAATACTG+CGG | 0.736185 | 5_4:-6812480 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATATATATATATATATATAT+AGG | + | chr5_4:6820281-6820300 | Msa0833720:intron | 0.0% |
!!! | TTTCTCTTAATAATTTTTAT+AGG | - | chr5_4:6812902-6812921 | None:intergenic | 10.0% |
!!! | AAACTTTTTATTTATAAAAG+TGG | - | chr5_4:6813396-6813415 | None:intergenic | 10.0% |
!! | GACAAATTAAAAATATAATA+TGG | - | chr5_4:6816960-6816979 | None:intergenic | 10.0% |
!! | CATGAATAAAAAATATTTAT+AGG | - | chr5_4:6818157-6818176 | None:intergenic | 10.0% |
!! | CAAATTAATTAAAAACTATA+TGG | + | chr5_4:6818253-6818272 | Msa0833720:intron | 10.0% |
!!! | TATTTTTTTTCATTCATTAT+AGG | - | chr5_4:6818946-6818965 | None:intergenic | 10.0% |
!! | TATATATATATATATAAGTC+AGG | + | chr5_4:6820350-6820369 | Msa0833720:intron | 10.0% |
!!! | TGATTTTTTTTTAATTACTT+TGG | - | chr5_4:6820707-6820726 | None:intergenic | 10.0% |
!! | TATATATATATATAGGATAT+AGG | + | chr5_4:6821177-6821196 | Msa0833720:intron | 10.0% |
!!! | TTTTTTAAATAATTGAGGAA+GGG | - | chr5_4:6813420-6813439 | None:intergenic | 15.0% |
!!! | TTTTTTTAAATAATTGAGGA+AGG | - | chr5_4:6813421-6813440 | None:intergenic | 15.0% |
!!! | AAATTATATTTTAAGGAACT+TGG | - | chr5_4:6814334-6814353 | None:intergenic | 15.0% |
!!! | TACAACTTTTAATCAATATA+TGG | - | chr5_4:6814629-6814648 | None:intergenic | 15.0% |
!! | TTGATTAGAATTAAATTGAA+AGG | + | chr5_4:6815404-6815423 | Msa0833720:intron | 15.0% |
!! | TGATTAGAATTAAATTGAAA+GGG | + | chr5_4:6815405-6815424 | Msa0833720:intron | 15.0% |
!! | AAATTTGAAGATATTGATAA+AGG | + | chr5_4:6815595-6815614 | Msa0833720:intron | 15.0% |
!!! | TTTTAAATTAAACAAGAGTT+GGG | + | chr5_4:6816026-6816045 | Msa0833720:intron | 15.0% |
!!! | CTATCTAAAATAAAATTGTT+AGG | - | chr5_4:6817461-6817480 | None:intergenic | 15.0% |
!!! | CTAACAATTTTATTTTAGAT+AGG | + | chr5_4:6817459-6817478 | Msa0833720:intron | 15.0% |
!!! | TGCAATTATTTCTTTAATTT+TGG | - | chr5_4:6817515-6817534 | None:intergenic | 15.0% |
!! | CAAGTTTGATTATATTAAAA+TGG | + | chr5_4:6817538-6817557 | Msa0833720:intron | 15.0% |
!! | TCTAAATTAGCTAAATATTA+GGG | - | chr5_4:6818613-6818632 | None:intergenic | 15.0% |
!! | ATCTAAATTAGCTAAATATT+AGG | - | chr5_4:6818614-6818633 | None:intergenic | 15.0% |
!! | AATAAATAATGAAAAAGGAA+CGG | + | chr5_4:6819051-6819070 | Msa0833720:intron | 15.0% |
!!! | GGACATTTTATTTTATAATT+GGG | + | chr5_4:6819072-6819091 | Msa0833720:intron | 15.0% |
!! | GAAAGAAATATATAAACAAA+TGG | + | chr5_4:6819121-6819140 | Msa0833720:intron | 15.0% |
!!! | GTATGATTTATTAGTTTTAA+CGG | - | chr5_4:6820423-6820442 | None:intergenic | 15.0% |
!! | GTTAAAACTAATAAATCATA+CGG | + | chr5_4:6820422-6820441 | Msa0833720:intron | 15.0% |
!! | TCATTATAAAAATTGGATAT+TGG | + | chr5_4:6820445-6820464 | Msa0833720:intron | 15.0% |
!!! | TTAAAATTGAAATTTTGAGA+TGG | + | chr5_4:6821248-6821267 | Msa0833720:intron | 15.0% |
!!! | CTAATTAAATTCTTTTAAAC+AGG | + | chr5_4:6821895-6821914 | Msa0833720:intron | 15.0% |
!! | TTAAAACCATTCTAACAAAA+AGG | - | chr5_4:6812760-6812779 | None:intergenic | 20.0% |
!!! | GTTTATCTTATAGTTTTTCT+AGG | - | chr5_4:6813001-6813020 | None:intergenic | 20.0% |
!!! | TTTTTATAGAAATATGTTCG+TGG | + | chr5_4:6813276-6813295 | Msa0833720:intron | 20.0% |
!!! | TTTTTAAATAATTGAGGAAG+GGG | - | chr5_4:6813419-6813438 | None:intergenic | 20.0% |
!! | AACATTCAAATAAAATCCTA+AGG | - | chr5_4:6813517-6813536 | None:intergenic | 20.0% |
!! | TTAGTATAGGAAAAGATAAA+AGG | - | chr5_4:6814767-6814786 | None:intergenic | 20.0% |
!!! | TACCTTCTTTTTTATCTTAA+TGG | + | chr5_4:6815084-6815103 | Msa0833720:intron | 20.0% |
!! | TACCATTAAGATAAAAAAGA+AGG | - | chr5_4:6815089-6815108 | None:intergenic | 20.0% |
!!! | ATTGCTGTAGATTTTTTTAA+AGG | + | chr5_4:6815128-6815147 | Msa0833720:intron | 20.0% |
!!! | AGATTTTTTTAAAGGTCAAT+AGG | + | chr5_4:6815136-6815155 | Msa0833720:intron | 20.0% |
!!! | GATTTTTTTAAAGGTCAATA+GGG | + | chr5_4:6815137-6815156 | Msa0833720:intron | 20.0% |
!! | AACTGCAAATATATAAAAGA+TGG | + | chr5_4:6815325-6815344 | Msa0833720:intron | 20.0% |
!!! | AAGATATTGATAAAGGTATT+AGG | + | chr5_4:6815602-6815621 | Msa0833720:intron | 20.0% |
!! | ATTAAACATGAAATTTAGAC+TGG | + | chr5_4:6815912-6815931 | Msa0833720:intron | 20.0% |
!! | CATTTCTAAATTCTAACTAT+TGG | - | chr5_4:6815943-6815962 | None:intergenic | 20.0% |
!! | TAGTTAGAATTTAGAAATGT+AGG | + | chr5_4:6815944-6815963 | Msa0833720:intron | 20.0% |
!! | AAAGATATATCATTTATCTC+TGG | - | chr5_4:6816009-6816028 | None:intergenic | 20.0% |
!!! | CTTTTAAATTAAACAAGAGT+TGG | + | chr5_4:6816025-6816044 | Msa0833720:intron | 20.0% |
!!! | ACTCATTGACATTAAATTTT+TGG | + | chr5_4:6816123-6816142 | Msa0833720:intron | 20.0% |
!! | AATCATCAAAAAGTTTATCT+GGG | + | chr5_4:6816865-6816884 | Msa0833720:intron | 20.0% |
!!! | TAAGAGCAAAAGTTATTTTT+TGG | - | chr5_4:6816909-6816928 | None:intergenic | 20.0% |
!! | ATATGGCTTAATTCAAAATT+TGG | - | chr5_4:6816943-6816962 | None:intergenic | 20.0% |
!!! | TTTTTAATTTGTCACATTGA+TGG | + | chr5_4:6816967-6816986 | Msa0833720:intron | 20.0% |
!! | TACAAGAAATCATTAACAAA+GGG | - | chr5_4:6817121-6817140 | None:intergenic | 20.0% |
!! | ATACAAGAAATCATTAACAA+AGG | - | chr5_4:6817122-6817141 | None:intergenic | 20.0% |
!!! | TTCAGATGTTTTATATATGA+TGG | + | chr5_4:6817296-6817315 | Msa0833720:intron | 20.0% |
!!! | GTTTTTCTTTTAATCAACTT+TGG | + | chr5_4:6817481-6817500 | Msa0833720:intron | 20.0% |
!!! | AGTGTAGATTTTAACTTAAA+AGG | + | chr5_4:6817586-6817605 | Msa0833720:intron | 20.0% |
!!! | GTGTAGATTTTAACTTAAAA+GGG | + | chr5_4:6817587-6817606 | Msa0833720:intron | 20.0% |
!!! | TGTAGATTTTAACTTAAAAG+GGG | + | chr5_4:6817588-6817607 | Msa0833720:intron | 20.0% |
!!! | TTAGTATGTTTTACATAAGA+AGG | + | chr5_4:6817660-6817679 | Msa0833720:intron | 20.0% |
!!! | GTGTATATTTTAACAAAAGA+GGG | + | chr5_4:6817689-6817708 | Msa0833720:intron | 20.0% |
!!! | TGTATATTTTAACAAAAGAG+GGG | + | chr5_4:6817690-6817709 | Msa0833720:intron | 20.0% |
!!! | TATTTTTCAGCAATTACATT+AGG | - | chr5_4:6817850-6817869 | None:intergenic | 20.0% |
!!! | AGATATTTTGTGATAAAAAG+TGG | - | chr5_4:6818490-6818509 | None:intergenic | 20.0% |
!!! | TTTTTATCACAAAATATCTC+TGG | + | chr5_4:6818491-6818510 | Msa0833720:intron | 20.0% |
!!! | TTATTCCTTTTAAGGTAATA+CGG | - | chr5_4:6818702-6818721 | None:intergenic | 20.0% |
!! | TGATAACTACGTTAATAATT+TGG | + | chr5_4:6818885-6818904 | Msa0833720:intron | 20.0% |
!! | GATAACTACGTTAATAATTT+GGG | + | chr5_4:6818886-6818905 | Msa0833720:intron | 20.0% |
!!! | TTTTTTCATTCATTATAGGA+AGG | - | chr5_4:6818942-6818961 | None:intergenic | 20.0% |
!! | ATGAAAAAAAATACTGTATC+AGG | + | chr5_4:6818953-6818972 | Msa0833720:intron | 20.0% |
!!! | CGGACATTTTATTTTATAAT+TGG | + | chr5_4:6819071-6819090 | Msa0833720:intron | 20.0% |
!! | TTAAAAACCCTAAAAAACAT+AGG | - | chr5_4:6819294-6819313 | None:intergenic | 20.0% |
!!! | AATTTTCTAGTTAATGATTC+TGG | + | chr5_4:6820131-6820150 | Msa0833720:CDS | 20.0% |
!!! | GTTTAAAATATATCCACATA+AGG | - | chr5_4:6821008-6821027 | None:intergenic | 20.0% |
!! | TATATATATAGGATATAGGA+TGG | + | chr5_4:6821181-6821200 | Msa0833720:intron | 20.0% |
!!! | TACTTTTCTGTTTAATTTCT+TGG | + | chr5_4:6821302-6821321 | Msa0833720:intron | 20.0% |
!! | TGTTATGAAAAATATACAAG+TGG | - | chr5_4:6821531-6821550 | None:intergenic | 20.0% |
!!! | ATCATTAAATAGGATTTTAC+TGG | - | chr5_4:6821609-6821628 | None:intergenic | 20.0% |
!!! | TTTTTACTGTTTAAGAAGTT+TGG | + | chr5_4:6821837-6821856 | Msa0833720:intron | 20.0% |
!!! | AAATTCTTTTAAACAGGTAT+TGG | + | chr5_4:6821901-6821920 | Msa0833720:intron | 20.0% |
!! | TAATATTTCTTTATATCCTG+TGG | - | chr5_4:6821964-6821983 | None:intergenic | 20.0% |
!!! | AATTATTTTGTACTGTTAGA+TGG | + | chr5_4:6822043-6822062 | Msa0833720:three_prime_UTR | 20.0% |
!!! | TTTCATTTAAGGTTTGTTAT+TGG | + | chr5_4:6822327-6822346 | Msa0833720:three_prime_UTR | 20.0% |
! | AGACAGGTTTATGATATTTA+TGG | + | chr5_4:6812300-6812319 | Msa0833720:CDS | 25.0% |
! | GGTTTATGATATTTATGGTA+TGG | + | chr5_4:6812305-6812324 | Msa0833720:CDS | 25.0% |
! | TATGATATTTATGGTATGGA+AGG | + | chr5_4:6812309-6812328 | Msa0833720:CDS | 25.0% |
! | ATGATATTTATGGTATGGAA+GGG | + | chr5_4:6812310-6812329 | Msa0833720:CDS | 25.0% |
! | TTAAGAGAAACTACTAAGAA+AGG | + | chr5_4:6812912-6812931 | Msa0833720:intron | 25.0% |
! | TTAATGAGTTGTAGATTAGA+CGG | + | chr5_4:6812943-6812962 | Msa0833720:intron | 25.0% |
! | TAAACTATTAAGAAAAGTCC+AGG | + | chr5_4:6813016-6813035 | Msa0833720:intron | 25.0% |
! | AAACTATTAAGAAAAGTCCA+GGG | + | chr5_4:6813017-6813036 | Msa0833720:intron | 25.0% |
! | TTGCAATAGTTTATCGATAT+TGG | + | chr5_4:6813173-6813192 | Msa0833720:intron | 25.0% |
! | AAAATTCAATCAAGAACACA+GGG | - | chr5_4:6813260-6813279 | None:intergenic | 25.0% |
! | AAAAATTCAATCAAGAACAC+AGG | - | chr5_4:6813261-6813280 | None:intergenic | 25.0% |
!! | CATTTTAAATTGTCTTAGGT+GGG | - | chr5_4:6813363-6813382 | None:intergenic | 25.0% |
!! | TGACCATTTTAAATTGTCTT+AGG | - | chr5_4:6813367-6813386 | None:intergenic | 25.0% |
! | TCAAATAAAATCCTAAGGAT+GGG | - | chr5_4:6813512-6813531 | None:intergenic | 25.0% |
! | TTCAAATAAAATCCTAAGGA+TGG | - | chr5_4:6813513-6813532 | None:intergenic | 25.0% |
! | AAATTGTACATAACTTTGTG+CGG | + | chr5_4:6814034-6814053 | Msa0833720:intron | 25.0% |
!! | GATCGATTTAATGATAACTA+TGG | + | chr5_4:6814082-6814101 | Msa0833720:intron | 25.0% |
! | TAAGCAACATACTAAATTCA+AGG | + | chr5_4:6814194-6814213 | Msa0833720:intron | 25.0% |
! | AAGCAACATACTAAATTCAA+GGG | + | chr5_4:6814195-6814214 | Msa0833720:intron | 25.0% |
!! | TGGTTTAGAATTTCTAAATG+TGG | + | chr5_4:6814241-6814260 | Msa0833720:intron | 25.0% |
!! | GGTTTAGAATTTCTAAATGT+GGG | + | chr5_4:6814242-6814261 | Msa0833720:intron | 25.0% |
!! | GTTTAGAATTTCTAAATGTG+GGG | + | chr5_4:6814243-6814262 | Msa0833720:intron | 25.0% |
!! | TTTAGAATTTCTAAATGTGG+GGG | + | chr5_4:6814244-6814263 | Msa0833720:intron | 25.0% |
!! | TAAGACCATTATTCTAAAGA+TGG | - | chr5_4:6814713-6814732 | None:intergenic | 25.0% |
! | GTTGAGAAAGAATTTAGTAT+AGG | - | chr5_4:6814780-6814799 | None:intergenic | 25.0% |
!! | AAAAAAGAAGGTATGAACAA+TGG | - | chr5_4:6815077-6815096 | None:intergenic | 25.0% |
!!! | ATTCCTAATCGATTTTCAAA+AGG | - | chr5_4:6815189-6815208 | None:intergenic | 25.0% |
!!! | TTTTGAAAATCGATTAGGAA+TGG | + | chr5_4:6815188-6815207 | Msa0833720:intron | 25.0% |
! | CTCTTATTATTCAATGTCAA+GGG | - | chr5_4:6815230-6815249 | None:intergenic | 25.0% |
! | CATAAAAACAAAAGAAACGA+TGG | - | chr5_4:6815280-6815299 | None:intergenic | 25.0% |
!!! | GTTTCTTTTGTTTTTATGCT+GGG | + | chr5_4:6815282-6815301 | Msa0833720:intron | 25.0% |
!!! | TTTCTTTTGTTTTTATGCTG+GGG | + | chr5_4:6815283-6815302 | Msa0833720:intron | 25.0% |
! | ATCTAAATTTCCCTCTTTAT+GGG | + | chr5_4:6815349-6815368 | Msa0833720:intron | 25.0% |
! | TTTATGGGAATCAAAATGAA+AGG | + | chr5_4:6815364-6815383 | Msa0833720:intron | 25.0% |
! | AGAATTAAATTGAAAGGGAA+AGG | + | chr5_4:6815410-6815429 | Msa0833720:intron | 25.0% |
!!! | CATTGAACTTTTTTCTATTG+AGG | + | chr5_4:6815483-6815502 | Msa0833720:intron | 25.0% |
! | TTGAAGTAAAATAGAGCATA+TGG | + | chr5_4:6815645-6815664 | Msa0833720:intron | 25.0% |
! | AAAAGTAAGATTGTGAATTG+AGG | + | chr5_4:6815792-6815811 | Msa0833720:intron | 25.0% |
!!! | GTTTGGGATATAAATTTTCT+TGG | - | chr5_4:6815973-6815992 | None:intergenic | 25.0% |
! | TAAACCGCTATAATTAATCA+CGG | - | chr5_4:6816347-6816366 | None:intergenic | 25.0% |
! | TTTCTAACACACTCTTTAAA+AGG | + | chr5_4:6816478-6816497 | Msa0833720:intron | 25.0% |
!! | TTCTAACACACTCTTTAAAA+GGG | + | chr5_4:6816479-6816498 | Msa0833720:intron | 25.0% |
!!! | CAGATAAACTTTTTGATGAT+TGG | - | chr5_4:6816866-6816885 | None:intergenic | 25.0% |
! | CAATCATCAAAAAGTTTATC+TGG | + | chr5_4:6816864-6816883 | Msa0833720:intron | 25.0% |
! | CTTAATTCAAAATTTGGATG+GGG | - | chr5_4:6816937-6816956 | None:intergenic | 25.0% |
! | GCTTAATTCAAAATTTGGAT+GGG | - | chr5_4:6816938-6816957 | None:intergenic | 25.0% |
! | AATCTTTAAATTTCCATAGG+TGG | - | chr5_4:6817010-6817029 | None:intergenic | 25.0% |
! | TGGAATCTTTAAATTTCCAT+AGG | - | chr5_4:6817013-6817032 | None:intergenic | 25.0% |
!! | ACCATTTATTTAACCTTTTC+AGG | + | chr5_4:6817152-6817171 | Msa0833720:intron | 25.0% |
!! | CCATTTATTTAACCTTTTCA+GGG | + | chr5_4:6817153-6817172 | Msa0833720:intron | 25.0% |
! | ATAAAAGTCAAATCCCAAAA+TGG | - | chr5_4:6817277-6817296 | None:intergenic | 25.0% |
! | TCATATCTCATTTGATCTAA+TGG | - | chr5_4:6817362-6817381 | None:intergenic | 25.0% |
!! | ATGGACGTAAGATTTTATTA+AGG | + | chr5_4:6817557-6817576 | Msa0833720:intron | 25.0% |
!! | TGGACGTAAGATTTTATTAA+GGG | + | chr5_4:6817558-6817577 | Msa0833720:intron | 25.0% |
!!! | GGTGTATATTTTAACAAAAG+AGG | + | chr5_4:6817688-6817707 | Msa0833720:intron | 25.0% |
! | TGTAATTTAAGCAACTCTTA+GGG | + | chr5_4:6817720-6817739 | Msa0833720:intron | 25.0% |
! | AGAAAGGGAAATTTATTAAC+AGG | - | chr5_4:6818354-6818373 | None:intergenic | 25.0% |
! | GTACACTCAAAATTTAGAAA+GGG | - | chr5_4:6818369-6818388 | None:intergenic | 25.0% |
! | ATCAAGATTTCTGTAACTAA+TGG | - | chr5_4:6818465-6818484 | None:intergenic | 25.0% |
! | TTAAACCGTATTACCTTAAA+AGG | + | chr5_4:6818694-6818713 | Msa0833720:CDS | 25.0% |
! | AAAGATTAACACTTCCTAAA+TGG | + | chr5_4:6819147-6819166 | Msa0833720:intron | 25.0% |
!!! | ATAAACAGCCTATGTTTTTT+AGG | + | chr5_4:6819283-6819302 | Msa0833720:intron | 25.0% |
!!! | TAAACAGCCTATGTTTTTTA+GGG | + | chr5_4:6819284-6819303 | Msa0833720:intron | 25.0% |
!! | TTTTTACTAGAAACCCAAAT+GGG | - | chr5_4:6819317-6819336 | None:intergenic | 25.0% |
!!! | TTTTTTACTAGAAACCCAAA+TGG | - | chr5_4:6819318-6819337 | None:intergenic | 25.0% |
! | CTAGTAAAAAAGAAACATGT+TGG | + | chr5_4:6819327-6819346 | Msa0833720:intron | 25.0% |
!!! | TTTTTAGTTTTTTTCCGCTA+TGG | + | chr5_4:6819399-6819418 | Msa0833720:intron | 25.0% |
! | TACCTAGATATGAAATGAAA+GGG | - | chr5_4:6819578-6819597 | None:intergenic | 25.0% |
! | ATACCTAGATATGAAATGAA+AGG | - | chr5_4:6819579-6819598 | None:intergenic | 25.0% |
! | TACAACAAAATGTAGCTAAT+AGG | + | chr5_4:6819964-6819983 | Msa0833720:CDS | 25.0% |
! | AAGAAACAAGCAATTAGAAA+CGG | + | chr5_4:6819989-6820008 | Msa0833720:CDS | 25.0% |
! | TCATTAACTAGAAAATTCAG+AGG | - | chr5_4:6820128-6820147 | None:intergenic | 25.0% |
! | CATACGGTCATTATAAAAAT+TGG | + | chr5_4:6820438-6820457 | Msa0833720:intron | 25.0% |
! | AAAAATTGGATATTGGAACA+CGG | + | chr5_4:6820452-6820471 | Msa0833720:intron | 25.0% |
! | CAATGAATATTCATAAGTGA+TGG | - | chr5_4:6820584-6820603 | None:intergenic | 25.0% |
! | CATCACTTATGAATATTCAT+TGG | + | chr5_4:6820582-6820601 | Msa0833720:intron | 25.0% |
!!! | GAAAAATTTGTTGTCACATT+AGG | - | chr5_4:6820644-6820663 | None:intergenic | 25.0% |
!! | TGTGACAACAAATTTTTCTA+TGG | + | chr5_4:6820646-6820665 | Msa0833720:intron | 25.0% |
! | ATGATCGTAGAAAATTGTAT+GGG | + | chr5_4:6820762-6820781 | Msa0833720:intron | 25.0% |
! | ACACGATCGATTAAATTTAA+CGG | + | chr5_4:6821029-6821048 | Msa0833720:intron | 25.0% |
! | TAAATTTAACGGTTGAGATT+TGG | + | chr5_4:6821040-6821059 | Msa0833720:intron | 25.0% |
! | AGTAACTGAAAGTTAAGTAT+AGG | + | chr5_4:6821275-6821294 | Msa0833720:intron | 25.0% |
! | GTAACTGAAAGTTAAGTATA+GGG | + | chr5_4:6821276-6821295 | Msa0833720:intron | 25.0% |
!!! | AGATTTATGTTCTAAAGATG+TGG | + | chr5_4:6821365-6821384 | Msa0833720:intron | 25.0% |
! | CCTCAGAAATATCATTAAAT+AGG | - | chr5_4:6821619-6821638 | None:intergenic | 25.0% |
!! | CCTATTTAATGATATTTCTG+AGG | + | chr5_4:6821616-6821635 | Msa0833720:intron | 25.0% |
!!! | ATTTTGGTGAAGTTACAATA+TGG | - | chr5_4:6821642-6821661 | None:intergenic | 25.0% |
!! | ACTTCACCAAAATTAAGTTT+TGG | + | chr5_4:6821649-6821668 | Msa0833720:intron | 25.0% |
!! | CTTCACCAAAATTAAGTTTT+GGG | + | chr5_4:6821650-6821669 | Msa0833720:intron | 25.0% |
! | AAAAAATTAAAGATACCCAC+TGG | - | chr5_4:6822104-6822123 | None:intergenic | 25.0% |
!! | ATGTTCCTTTTATTGTTCAT+TGG | + | chr5_4:6822256-6822275 | Msa0833720:three_prime_UTR | 25.0% |
! | AAGAATGAACTTATATGGTT+GGG | - | chr5_4:6822291-6822310 | None:intergenic | 25.0% |
! | AAATGAAAATTACAGCCATT+GGG | - | chr5_4:6822315-6822334 | None:intergenic | 25.0% |
! | TAAATGAAAATTACAGCCAT+TGG | - | chr5_4:6822316-6822335 | None:intergenic | 25.0% |
!! | ATGGCTGTAATTTTCATTTA+AGG | + | chr5_4:6822316-6822335 | Msa0833720:three_prime_UTR | 25.0% |
! | TTTTGCAGAGAAATTGTGAA+TGG | - | chr5_4:6812017-6812036 | None:intergenic | 30.0% |
TCATAAACCTGTCTCTTATT+CGG | - | chr5_4:6812294-6812313 | None:intergenic | 30.0% | |
GATAAGCTAGTGTATTGAAA+TGG | + | chr5_4:6812642-6812661 | Msa0833720:intron | 30.0% | |
! | TGCATACCTTTTTGTTAGAA+TGG | + | chr5_4:6812751-6812770 | Msa0833720:intron | 30.0% |
GATAGTAATCAAATCACTAG+AGG | + | chr5_4:6812965-6812984 | Msa0833720:intron | 30.0% | |
ATGGATATGATAGAACATTG+CGG | + | chr5_4:6813055-6813074 | Msa0833720:intron | 30.0% | |
ATCGATAAACTATTGCAACA+AGG | - | chr5_4:6813171-6813190 | None:intergenic | 30.0% | |
! | CCATTTTAAATTGTCTTAGG+TGG | - | chr5_4:6813364-6813383 | None:intergenic | 30.0% |
CCACCTAAGACAATTTAAAA+TGG | + | chr5_4:6813361-6813380 | Msa0833720:intron | 30.0% | |
GAAGCAATTATTTAACTGTC+AGG | - | chr5_4:6813459-6813478 | None:intergenic | 30.0% | |
TTGTCAAAACGAAATGTTGT+TGG | + | chr5_4:6813601-6813620 | Msa0833720:CDS | 30.0% | |
TGTCAAAACGAAATGTTGTT+GGG | + | chr5_4:6813602-6813621 | Msa0833720:CDS | 30.0% | |
ATTAAGTCATCAACTTTCTG+AGG | + | chr5_4:6813681-6813700 | Msa0833720:CDS | 30.0% | |
ATAGAATTTATTGCTTCAGC+CGG | + | chr5_4:6813712-6813731 | Msa0833720:CDS | 30.0% | |
GAAACACATAAATCATCACT+AGG | - | chr5_4:6813822-6813841 | None:intergenic | 30.0% | |
! | TTAACAATGTCTTTGAGAGA+TGG | + | chr5_4:6813894-6813913 | Msa0833720:CDS | 30.0% |
TTGCTTATACAAAGTAATCC+TGG | - | chr5_4:6814181-6814200 | None:intergenic | 30.0% | |
TACTAAATTCAAGGGAACAA+AGG | + | chr5_4:6814203-6814222 | Msa0833720:intron | 30.0% | |
GTCAACAAAGTTTGTATGTT+TGG | + | chr5_4:6814296-6814315 | Msa0833720:intron | 30.0% | |
! | CTGGCGCAAATTATATTTTA+AGG | - | chr5_4:6814341-6814360 | None:intergenic | 30.0% |
! | AATATAATTTGCGCCAGAAT+TGG | + | chr5_4:6814344-6814363 | Msa0833720:intron | 30.0% |
ATTTCAGATACAACTCATGT+TGG | + | chr5_4:6814481-6814500 | Msa0833720:intron | 30.0% | |
TTTCAGATACAACTCATGTT+GGG | + | chr5_4:6814482-6814501 | Msa0833720:intron | 30.0% | |
ATATATGGTCGTAAAATGTC+CGG | - | chr5_4:6814614-6814633 | None:intergenic | 30.0% | |
!! | TGCTTCCATCTTTAGAATAA+TGG | + | chr5_4:6814705-6814724 | Msa0833720:intron | 30.0% |
! | CGATTTTCTTCTAAATCTCA+TGG | + | chr5_4:6814850-6814869 | Msa0833720:CDS | 30.0% |
GGAAACAGAGTAAAATTAGT+TGG | - | chr5_4:6815056-6815075 | None:intergenic | 30.0% | |
CCTCTTATTATTCAATGTCA+AGG | - | chr5_4:6815231-6815250 | None:intergenic | 30.0% | |
CCTTGACATTGAATAATAAG+AGG | + | chr5_4:6815228-6815247 | Msa0833720:intron | 30.0% | |
!!! | CGTTTCTTTTGTTTTTATGC+TGG | + | chr5_4:6815281-6815300 | Msa0833720:intron | 30.0% |
CATCTAAATTTCCCTCTTTA+TGG | + | chr5_4:6815348-6815367 | Msa0833720:intron | 30.0% | |
!!! | CATTTTGATTCCCATAAAGA+GGG | - | chr5_4:6815362-6815381 | None:intergenic | 30.0% |
!!! | TCATTTTGATTCCCATAAAG+AGG | - | chr5_4:6815363-6815382 | None:intergenic | 30.0% |
CATTCAGCATATATAAGAGA+TGG | + | chr5_4:6815511-6815530 | Msa0833720:intron | 30.0% | |
! | ATATATAAGAGATGGTGTCA+TGG | + | chr5_4:6815519-6815538 | Msa0833720:intron | 30.0% |
!!! | TAACATTTTAAAACGCCTTG+TGG | - | chr5_4:6815732-6815751 | None:intergenic | 30.0% |
! | TTAAATACTTGATAGCCTGT+AGG | + | chr5_4:6816070-6816089 | Msa0833720:intron | 30.0% |
AAAGACAAGAACGATAAACA+TGG | - | chr5_4:6816320-6816339 | None:intergenic | 30.0% | |
GTTTCCGTGATTAATTATAG+CGG | + | chr5_4:6816340-6816359 | Msa0833720:intron | 30.0% | |
GTGATTAATTATAGCGGTTT+AGG | + | chr5_4:6816346-6816365 | Msa0833720:intron | 30.0% | |
!!! | TTACCCTGTTTTTTACACAT+GGG | + | chr5_4:6816578-6816597 | Msa0833720:intron | 30.0% |
! | TCAAAGAGTGTGTTAGAAAA+GGG | - | chr5_4:6816663-6816682 | None:intergenic | 30.0% |
! | ATCAAAGAGTGTGTTAGAAA+AGG | - | chr5_4:6816664-6816683 | None:intergenic | 30.0% |
TTTCTAACACACTCTTTGAT+TGG | + | chr5_4:6816664-6816683 | Msa0833720:intron | 30.0% | |
TAGGTCCCACAATATTTATA+CGG | - | chr5_4:6816727-6816746 | None:intergenic | 30.0% | |
!!! | AACTGCATAGTATTTTAGCA+GGG | - | chr5_4:6816828-6816847 | None:intergenic | 30.0% |
!!! | AAACTGCATAGTATTTTAGC+AGG | - | chr5_4:6816829-6816848 | None:intergenic | 30.0% |
GGCTTAATTCAAAATTTGGA+TGG | - | chr5_4:6816939-6816958 | None:intergenic | 30.0% | |
CCCTGAAAAGGTTAAATAAA+TGG | - | chr5_4:6817156-6817175 | None:intergenic | 30.0% | |
ATCTCATTTGATCTAATGGT+GGG | - | chr5_4:6817358-6817377 | None:intergenic | 30.0% | |
TATCTCATTTGATCTAATGG+TGG | - | chr5_4:6817359-6817378 | None:intergenic | 30.0% | |
TCTCACATACACAAGTAAAA+TGG | - | chr5_4:6817434-6817453 | None:intergenic | 30.0% | |
! | CGTAAGATTTTATTAAGGGA+TGG | + | chr5_4:6817562-6817581 | Msa0833720:intron | 30.0% |
!!! | AGATTTTAACTTAAAAGGGG+AGG | + | chr5_4:6817591-6817610 | Msa0833720:intron | 30.0% |
!!! | GATTTTAACTTAAAAGGGGA+GGG | + | chr5_4:6817592-6817611 | Msa0833720:intron | 30.0% |
!!! | ATTTTAACTTAAAAGGGGAG+GGG | + | chr5_4:6817593-6817612 | Msa0833720:intron | 30.0% |
ATGTAATTCAAACTTCTCTC+AGG | + | chr5_4:6817617-6817636 | Msa0833720:intron | 30.0% | |
TGTAATTCAAACTTCTCTCA+GGG | + | chr5_4:6817618-6817637 | Msa0833720:intron | 30.0% | |
! | TGTTTTACATAAGAAGGAAG+AGG | + | chr5_4:6817666-6817685 | Msa0833720:intron | 30.0% |
! | GTTTTACATAAGAAGGAAGA+GGG | + | chr5_4:6817667-6817686 | Msa0833720:intron | 30.0% |
!!! | ATATTTTAACAAAAGAGGGG+AGG | + | chr5_4:6817693-6817712 | Msa0833720:intron | 30.0% |
!!! | TATTTTAACAAAAGAGGGGA+GGG | + | chr5_4:6817694-6817713 | Msa0833720:intron | 30.0% |
GTGTAATTTAAGCAACTCTT+AGG | + | chr5_4:6817719-6817738 | Msa0833720:intron | 30.0% | |
AGCAATTACATTAGGTTTCA+AGG | - | chr5_4:6817842-6817861 | None:intergenic | 30.0% | |
! | ATCGTTTTACTTTGTTCTGA+AGG | + | chr5_4:6818044-6818063 | Msa0833720:CDS | 30.0% |
!! | TAGCACTGACAATACTTAAA+CGG | - | chr5_4:6818111-6818130 | None:intergenic | 30.0% |
TGCTGAATAATGATGACTTA+CGG | - | chr5_4:6818196-6818215 | None:intergenic | 30.0% | |
TAAGTCATCATTATTCAGCA+GGG | + | chr5_4:6818196-6818215 | Msa0833720:intron | 30.0% | |
GGGAAATTTATTAACAGGTA+TGG | - | chr5_4:6818349-6818368 | None:intergenic | 30.0% | |
GGTACACTCAAAATTTAGAA+AGG | - | chr5_4:6818370-6818389 | None:intergenic | 30.0% | |
AGTTATCTTGATTCTTCGTA+TGG | - | chr5_4:6818527-6818546 | None:intergenic | 30.0% | |
! | GTTTGATTTATTGAACAGCT+TGG | + | chr5_4:6818579-6818598 | Msa0833720:intron | 30.0% |
AAAAACTTCTACTCAGGTAT+GGG | + | chr5_4:6818746-6818765 | Msa0833720:intron | 30.0% | |
TTATGGTATTAACTGAGTAG+TGG | + | chr5_4:6818775-6818794 | Msa0833720:intron | 30.0% | |
! | GTAAGATGGTCTATATTTTC+TGG | + | chr5_4:6818857-6818876 | Msa0833720:intron | 30.0% |
!! | TTTAGGGTTTTTAACCCATT+TGG | + | chr5_4:6819300-6819319 | Msa0833720:intron | 30.0% |
! | TTAGGGTTTTTAACCCATTT+GGG | + | chr5_4:6819301-6819320 | Msa0833720:intron | 30.0% |
AAACAGAGAAAACTGAGATT+GGG | - | chr5_4:6819378-6819397 | None:intergenic | 30.0% | |
AAAACAGAGAAAACTGAGAT+TGG | - | chr5_4:6819379-6819398 | None:intergenic | 30.0% | |
AAAATCTTACTGTCCAACTA+TGG | - | chr5_4:6819472-6819491 | None:intergenic | 30.0% | |
TAAAGATTCACCATCCAAAT+AGG | - | chr5_4:6819519-6819538 | None:intergenic | 30.0% | |
ACCTAGATATGAAATGAAAG+GGG | - | chr5_4:6819577-6819596 | None:intergenic | 30.0% | |
! | GACATGTAACTTCTAAAAAG+TGG | - | chr5_4:6819817-6819836 | None:intergenic | 30.0% |
! | AGACATATCAGATCTGTTTT+TGG | + | chr5_4:6819846-6819865 | Msa0833720:intron | 30.0% |
AGAAACAAGCAATTAGAAAC+GGG | + | chr5_4:6819990-6820009 | Msa0833720:CDS | 30.0% | |
AACAACTTGTATTCGTCAAA+TGG | + | chr5_4:6820059-6820078 | Msa0833720:CDS | 30.0% | |
!!! | ACAAGTTTTGAATCTACTTC+AGG | + | chr5_4:6820083-6820102 | Msa0833720:CDS | 30.0% |
TAATGATTCTGGTCAACTTA+AGG | + | chr5_4:6820142-6820161 | Msa0833720:CDS | 30.0% | |
!! | TAACTTTTTGAGAGAAAGCA+AGG | - | chr5_4:6820175-6820194 | None:intergenic | 30.0% |
ATCGATGACTAAGAACATTT+AGG | - | chr5_4:6820615-6820634 | None:intergenic | 30.0% | |
!! | AAATTTGTTGTCACATTAGG+AGG | - | chr5_4:6820641-6820660 | None:intergenic | 30.0% |
ATGAAAAGAAACGCTAAAAG+GGG | - | chr5_4:6820744-6820763 | None:intergenic | 30.0% | |
CATGAAAAGAAACGCTAAAA+GGG | - | chr5_4:6820745-6820764 | None:intergenic | 30.0% | |
TCATGAAAAGAAACGCTAAA+AGG | - | chr5_4:6820746-6820765 | None:intergenic | 30.0% | |
CATGATCGTAGAAAATTGTA+TGG | + | chr5_4:6820761-6820780 | Msa0833720:intron | 30.0% | |
GTTAAATTTAATCGATCGTG+TGG | - | chr5_4:6821030-6821049 | None:intergenic | 30.0% | |
ATATAGGATATAGGATGGAA+TGG | + | chr5_4:6821186-6821205 | Msa0833720:intron | 30.0% | |
TTGGACTGACATTAAATTTC+TGG | + | chr5_4:6821321-6821340 | Msa0833720:intron | 30.0% | |
TCTCTTTGACGTAAAACTTA+AGG | - | chr5_4:6821348-6821367 | None:intergenic | 30.0% | |
CAGAGTTGAGTTTAATGAAT+TGG | - | chr5_4:6821431-6821450 | None:intergenic | 30.0% | |
CTACTACTTGTGTGAATTAA+AGG | + | chr5_4:6821563-6821582 | Msa0833720:intron | 30.0% | |
AACAGAACTTCCATTATTTC+AGG | - | chr5_4:6821682-6821701 | None:intergenic | 30.0% | |
TGTAAAGAAATCAGGAATCA+TGG | + | chr5_4:6821724-6821743 | Msa0833720:CDS | 30.0% | |
GTAAAGAAATCAGGAATCAT+GGG | + | chr5_4:6821725-6821744 | Msa0833720:CDS | 30.0% | |
!!! | TCTTTTAAACAGGTATTGGT+TGG | + | chr5_4:6821905-6821924 | Msa0833720:intron | 30.0% |
TTACCTCAAGTATGTAAACA+AGG | - | chr5_4:6822024-6822043 | None:intergenic | 30.0% | |
TGCAACCAATGAACAATAAA+AGG | - | chr5_4:6822264-6822283 | None:intergenic | 30.0% | |
CAAGAATGAACTTATATGGT+TGG | - | chr5_4:6822292-6822311 | None:intergenic | 30.0% | |
GAACTGATACAAAAATGTCA+CGG | - | chr5_4:6822402-6822421 | None:intergenic | 30.0% | |
! | AAAACATCCACAAGGTATCT+TGG | - | chr5_4:6811940-6811959 | None:intergenic | 35.0% |
!! | TACCTTGTGGATGTTTTGTT+TGG | + | chr5_4:6811943-6811962 | Msa0833720:five_prime_UTR | 35.0% |
!!! | ACCTTGTGGATGTTTTGTTT+GGG | + | chr5_4:6811944-6811963 | Msa0833720:five_prime_UTR | 35.0% |
GGAGAATTTGAGGGTTATTA+GGG | - | chr5_4:6812040-6812059 | None:intergenic | 35.0% | |
TGGAGAATTTGAGGGTTATT+AGG | - | chr5_4:6812041-6812060 | None:intergenic | 35.0% | |
!!! | CAGAGTTTTGTTCCATCATT+GGG | - | chr5_4:6812083-6812102 | None:intergenic | 35.0% |
!!! | TCAGAGTTTTGTTCCATCAT+TGG | - | chr5_4:6812084-6812103 | None:intergenic | 35.0% |
! | CATCTTTCATGAGAGGATTT+TGG | - | chr5_4:6812218-6812237 | None:intergenic | 35.0% |
AACTCGTTGAAAATTCTCAG+TGG | - | chr5_4:6812244-6812263 | None:intergenic | 35.0% | |
!! | TTGAAATCTGGTTTGGAACT+TGG | + | chr5_4:6812333-6812352 | Msa0833720:CDS | 35.0% |
TCAGTTCGCTTATCAACTAT+CGG | - | chr5_4:6812570-6812589 | None:intergenic | 35.0% | |
! | TTGATAAGCTAGCTTGTAGT+TGG | + | chr5_4:6812614-6812633 | Msa0833720:intron | 35.0% |
TGTATTGAAATGGCAGTGTT+TGG | + | chr5_4:6812652-6812671 | Msa0833720:intron | 35.0% | |
GATAGTGAATGAGCTTATAG+CGG | + | chr5_4:6812821-6812840 | Msa0833720:intron | 35.0% | |
ATATCCAGTTCATTAATCCC+TGG | - | chr5_4:6813037-6813056 | None:intergenic | 35.0% | |
AGGGATTAATGAACTGGATA+TGG | + | chr5_4:6813036-6813055 | Msa0833720:intron | 35.0% | |
! | AAGCTTTATCCCATTAAGTG+GGG | - | chr5_4:6813104-6813123 | None:intergenic | 35.0% |
! | CAAGCTTTATCCCATTAAGT+GGG | - | chr5_4:6813105-6813124 | None:intergenic | 35.0% |
! | TCAAGCTTTATCCCATTAAG+TGG | - | chr5_4:6813106-6813125 | None:intergenic | 35.0% |
AGTGTTAATGTACGCAATGA+TGG | + | chr5_4:6813202-6813221 | Msa0833720:intron | 35.0% | |
AAACGAAATGTTGTTGGGAT+TGG | + | chr5_4:6813607-6813626 | Msa0833720:CDS | 35.0% | |
TCCAATTAGTGAACGTAAAC+CGG | - | chr5_4:6813734-6813753 | None:intergenic | 35.0% | |
CGTTGAATCTTTCTAATGCA+TGG | + | chr5_4:6813919-6813938 | Msa0833720:CDS | 35.0% | |
AGATGAGAAAGAAAAGTCCA+AGG | - | chr5_4:6813993-6814012 | None:intergenic | 35.0% | |
AAAATAATGTCCACTGCATC+TGG | + | chr5_4:6814140-6814159 | Msa0833720:intron | 35.0% | |
!! | ACAAAGTAATCCTGGTTTTC+TGG | - | chr5_4:6814173-6814192 | None:intergenic | 35.0% |
ACACTCATCTATTACAAGGT+CGG | - | chr5_4:6814278-6814297 | None:intergenic | 35.0% | |
GTTGACACTCATCTATTACA+AGG | - | chr5_4:6814282-6814301 | None:intergenic | 35.0% | |
ACACTTATATGAGCCAATTC+TGG | - | chr5_4:6814360-6814379 | None:intergenic | 35.0% | |
! | GAATTGGCTCATATAAGTGT+TGG | + | chr5_4:6814360-6814379 | Msa0833720:intron | 35.0% |
! | AACTCACCAATGCTTTGAAT+TGG | - | chr5_4:6814386-6814405 | None:intergenic | 35.0% |
!! | ATTCAAAGCATTGGTGAGTT+TGG | + | chr5_4:6814386-6814405 | Msa0833720:intron | 35.0% |
AATCTGTTTCATAATCCCTG+AGG | - | chr5_4:6814422-6814441 | None:intergenic | 35.0% | |
CAGGGATTATGAAACAGATT+TGG | + | chr5_4:6814422-6814441 | Msa0833720:intron | 35.0% | |
GCAAAATCAGTCATTTGTAC+CGG | + | chr5_4:6814592-6814611 | Msa0833720:intron | 35.0% | |
AAAATCTAAGTACGACGGTA+TGG | - | chr5_4:6814934-6814953 | None:intergenic | 35.0% | |
! | ATACCGTCGTACTTAGATTT+TGG | + | chr5_4:6814933-6814952 | Msa0833720:intron | 35.0% |
TCACCAAAATCTAAGTACGA+CGG | - | chr5_4:6814939-6814958 | None:intergenic | 35.0% | |
TTGCAATGTCACTGTATTGT+TGG | + | chr5_4:6814967-6814986 | Msa0833720:intron | 35.0% | |
!! | CCTAATCGATTTTCAAAAGG+AGG | - | chr5_4:6815186-6815205 | None:intergenic | 35.0% |
!! | CCTCCTTTTGAAAATCGATT+AGG | + | chr5_4:6815183-6815202 | Msa0833720:intron | 35.0% |
ACAAAAGAAACGATGGTGTA+TGG | - | chr5_4:6815273-6815292 | None:intergenic | 35.0% | |
AGAGAGAAATTTCAGTGTAG+AGG | + | chr5_4:6815683-6815702 | Msa0833720:intron | 35.0% | |
AGATGATACAGTCTCATCTT+AGG | + | chr5_4:6815833-6815852 | Msa0833720:intron | 35.0% | |
ACATGAAATTTAGACTGGAC+AGG | + | chr5_4:6815917-6815936 | Msa0833720:intron | 35.0% | |
!! | TGGATCTCTCTTTAAGGTTT+GGG | - | chr5_4:6815989-6816008 | None:intergenic | 35.0% |
TATCTCTGGATCTCTCTTTA+AGG | - | chr5_4:6815995-6816014 | None:intergenic | 35.0% | |
GGAAGAGCTAAAAGTTCAAA+TGG | - | chr5_4:6816187-6816206 | None:intergenic | 35.0% | |
!!! | TTTTAGCTCTTCCATTGAGA+TGG | + | chr5_4:6816194-6816213 | Msa0833720:intron | 35.0% |
AATTATAGCGGTTTAGGCTT+AGG | + | chr5_4:6816352-6816371 | Msa0833720:intron | 35.0% | |
ATTATAGCGGTTTAGGCTTA+GGG | + | chr5_4:6816353-6816372 | Msa0833720:intron | 35.0% | |
CATGTGTAAAAAACAGGGTA+AGG | - | chr5_4:6816579-6816598 | None:intergenic | 35.0% | |
!!! | CTTACCCTGTTTTTTACACA+TGG | + | chr5_4:6816577-6816596 | Msa0833720:intron | 35.0% |
!!! | TACCCTGTTTTTTACACATG+GGG | + | chr5_4:6816579-6816598 | Msa0833720:intron | 35.0% |
! | AAAGAGTGTGTTAGAAAAGG+GGG | - | chr5_4:6816661-6816680 | None:intergenic | 35.0% |
! | CAAAGAGTGTGTTAGAAAAG+GGG | - | chr5_4:6816662-6816681 | None:intergenic | 35.0% |
TTGTTTCCACTGAATCATGT+TGG | + | chr5_4:6816699-6816718 | Msa0833720:intron | 35.0% | |
TTGGACCCGTATAAATATTG+TGG | + | chr5_4:6816718-6816737 | Msa0833720:intron | 35.0% | |
TGGACCCGTATAAATATTGT+GGG | + | chr5_4:6816719-6816738 | Msa0833720:intron | 35.0% | |
AGGTCCCACAATATTTATAC+GGG | - | chr5_4:6816726-6816745 | None:intergenic | 35.0% | |
TCTTTAGTATGGTGAGGAAA+AGG | - | chr5_4:6816768-6816787 | None:intergenic | 35.0% | |
! | CAAAAAGTTTATCTGGGATG+TGG | + | chr5_4:6816871-6816890 | Msa0833720:intron | 35.0% |
AAATTTCCATAGGTGGAAAC+TGG | - | chr5_4:6817003-6817022 | None:intergenic | 35.0% | |
GTAAAGAAGACTCTTCTTAC+AGG | - | chr5_4:6817228-6817247 | None:intergenic | 35.0% | |
! | ATAGATGCTAGACACCATTT+TGG | + | chr5_4:6817260-6817279 | Msa0833720:intron | 35.0% |
! | TAGATGCTAGACACCATTTT+GGG | + | chr5_4:6817261-6817280 | Msa0833720:intron | 35.0% |
!! | GATATGACTTGTTGATCCAA+TGG | + | chr5_4:6817380-6817399 | Msa0833720:intron | 35.0% |
!!! | TTTTAACTTAAAAGGGGAGG+GGG | + | chr5_4:6817594-6817613 | Msa0833720:intron | 35.0% |
GTAATTCAAACTTCTCTCAG+GGG | + | chr5_4:6817619-6817638 | Msa0833720:intron | 35.0% | |
TTCACAAAGGAAGCTAAACA+GGG | - | chr5_4:6817802-6817821 | None:intergenic | 35.0% | |
TTAGCTTCCTTTGTGAACTT+CGG | + | chr5_4:6817805-6817824 | Msa0833720:intron | 35.0% | |
AGAACAAAGTAAAACGATGC+TGG | - | chr5_4:6818042-6818061 | None:intergenic | 35.0% | |
ACTTAAACGGTTCAACAAGT+AGG | - | chr5_4:6818098-6818117 | None:intergenic | 35.0% | |
! | TAAGTATTGTCAGTGCTATC+TGG | + | chr5_4:6818113-6818132 | Msa0833720:intron | 35.0% |
GTAAGTCATCATTATTCAGC+AGG | + | chr5_4:6818195-6818214 | Msa0833720:intron | 35.0% | |
! | TTATTCAGCAGGGTGAATTT+TGG | + | chr5_4:6818206-6818225 | Msa0833720:intron | 35.0% |
!!! | TGCGTGTTATTTTGTTCCAA+TGG | - | chr5_4:6818295-6818314 | None:intergenic | 35.0% |
!!! | TGTACCTTTTCTAGTTCACA+AGG | + | chr5_4:6818384-6818403 | Msa0833720:intron | 35.0% |
ACAACCTTGTGAACTAGAAA+AGG | - | chr5_4:6818391-6818410 | None:intergenic | 35.0% | |
! | CCTTCTGCTTATTCCTTTTA+AGG | - | chr5_4:6818710-6818729 | None:intergenic | 35.0% |
CCTTAAAAGGAATAAGCAGA+AGG | + | chr5_4:6818707-6818726 | Msa0833720:CDS | 35.0% | |
GAAAAACTTCTACTCAGGTA+TGG | + | chr5_4:6818745-6818764 | Msa0833720:intron | 35.0% | |
! | TCAGGTATGGGTGATTTTTA+TGG | + | chr5_4:6818758-6818777 | Msa0833720:intron | 35.0% |
ATTAACTGAGTAGTGGTGTT+AGG | + | chr5_4:6818782-6818801 | Msa0833720:intron | 35.0% | |
!! | TACTTGTGTGTTGTTGTTTC+TGG | + | chr5_4:6818811-6818830 | Msa0833720:intron | 35.0% |
TGTACTCTTCTCATGTAAGA+TGG | + | chr5_4:6818843-6818862 | Msa0833720:intron | 35.0% | |
TACTAGTCAATGCATGATAC+AGG | + | chr5_4:6818912-6818931 | Msa0833720:intron | 35.0% | |
GATTAACACTTCCTAAATGG+TGG | + | chr5_4:6819150-6819169 | Msa0833720:intron | 35.0% | |
AAAAAAGAAACATGTTGGCC+TGG | + | chr5_4:6819332-6819351 | Msa0833720:intron | 35.0% | |
! | AAAAAGAAACATGTTGGCCT+GGG | + | chr5_4:6819333-6819352 | Msa0833720:intron | 35.0% |
!!! | GTAGCATATTGGTTTTCACA+TGG | - | chr5_4:6819447-6819466 | None:intergenic | 35.0% |
TCACAAGTTCAATGCCTATT+TGG | + | chr5_4:6819502-6819521 | Msa0833720:intron | 35.0% | |
AAGTTCAATGCCTATTTGGA+TGG | + | chr5_4:6819506-6819525 | Msa0833720:intron | 35.0% | |
! | ATTTTCAATTGTACAGCCAG+TGG | + | chr5_4:6819542-6819561 | Msa0833720:intron | 35.0% |
TGAAATGAAAGGGGAACTAA+AGG | - | chr5_4:6819568-6819587 | None:intergenic | 35.0% | |
TCCCCTTTCATTTCATATCT+AGG | + | chr5_4:6819573-6819592 | Msa0833720:intron | 35.0% | |
!! | AAGAACTAAAAGGAGGCATT+TGG | - | chr5_4:6819646-6819665 | None:intergenic | 35.0% |
!!! | AAATGCCTCCTTTTAGTTCT+TGG | + | chr5_4:6819645-6819664 | Msa0833720:intron | 35.0% |
TATCACAGCCAAGAACTAAA+AGG | - | chr5_4:6819656-6819675 | None:intergenic | 35.0% | |
CATTTGTAAGCCTCATGATT+AGG | - | chr5_4:6819710-6819729 | None:intergenic | 35.0% | |
AACTTGTAAGCCTCATGATT+AGG | - | chr5_4:6819752-6819771 | None:intergenic | 35.0% | |
CAGATCTGATATGTCTTCTA+TGG | - | chr5_4:6819842-6819861 | None:intergenic | 35.0% | |
!! | GTTGTTATGAAAGCGCTATA+TGG | + | chr5_4:6820020-6820039 | Msa0833720:CDS | 35.0% |
ATTCTGGTCAACTTAAGGTA+TGG | + | chr5_4:6820147-6820166 | Msa0833720:intron | 35.0% | |
TAAGTCTAAAGACTTACACC+TGG | - | chr5_4:6820387-6820406 | None:intergenic | 35.0% | |
AAAAAACTACGATGAGGAAG+GGG | - | chr5_4:6820488-6820507 | None:intergenic | 35.0% | |
GAAAAAACTACGATGAGGAA+GGG | - | chr5_4:6820489-6820508 | None:intergenic | 35.0% | |
AGAAAAAACTACGATGAGGA+AGG | - | chr5_4:6820490-6820509 | None:intergenic | 35.0% | |
TTGGAGAAAAAACTACGATG+AGG | - | chr5_4:6820494-6820513 | None:intergenic | 35.0% | |
GGAATCACAAGTTTCATTGT+TGG | - | chr5_4:6820513-6820532 | None:intergenic | 35.0% | |
!! | TGAGATTGTTGATGACAGAA+TGG | - | chr5_4:6820555-6820574 | None:intergenic | 35.0% |
TGCTGCAAACTCCTTTAATT+AGG | + | chr5_4:6821216-6821235 | Msa0833720:intron | 35.0% | |
ACTCCTTTAATTAGGCATGA+TGG | + | chr5_4:6821224-6821243 | Msa0833720:intron | 35.0% | |
CTCCTTTAATTAGGCATGAT+GGG | + | chr5_4:6821225-6821244 | Msa0833720:intron | 35.0% | |
AACCCATCATGCCTAATTAA+AGG | - | chr5_4:6821230-6821249 | None:intergenic | 35.0% | |
! | TTTTTGCATCTTCGCGATAA+AGG | - | chr5_4:6821487-6821506 | None:intergenic | 35.0% |
GATGCAAAAACCTACTTGAA+AGG | + | chr5_4:6821497-6821516 | Msa0833720:intron | 35.0% | |
! | GTGCTCCCAAAACTTAATTT+TGG | - | chr5_4:6821658-6821677 | None:intergenic | 35.0% |
! | TACAACAGTTTAGTTTCTCC+TGG | - | chr5_4:6821767-6821786 | None:intergenic | 35.0% |
!! | TAATACCTTGTGTTGATTGC+CGG | - | chr5_4:6821807-6821826 | None:intergenic | 35.0% |
! | GAGTATAAACCTTTTGCATC+TGG | + | chr5_4:6821859-6821878 | Msa0833720:intron | 35.0% |
! | ATAAACCTTTTGCATCTGGT+TGG | + | chr5_4:6821863-6821882 | Msa0833720:intron | 35.0% |
!! | TTGCCTTGTTTACATACTTG+AGG | + | chr5_4:6822018-6822037 | Msa0833720:three_prime_UTR | 35.0% |
! | ACCTTCAAGCTACAATTTTC+AGG | + | chr5_4:6822078-6822097 | Msa0833720:three_prime_UTR | 35.0% |
! | CCCTTATTTCATCATTTGCA+GGG | - | chr5_4:6822152-6822171 | None:intergenic | 35.0% |
CCCTGCAAATGATGAAATAA+GGG | + | chr5_4:6822149-6822168 | Msa0833720:three_prime_UTR | 35.0% | |
!!! | TGATGAAATAAGGGCGTTTT+AGG | + | chr5_4:6822158-6822177 | Msa0833720:three_prime_UTR | 35.0% |
AGGAACATCACACAAAATTG+TGG | - | chr5_4:6822244-6822263 | None:intergenic | 35.0% | |
TGGGCAAGAATGAACTTATA+TGG | - | chr5_4:6822296-6822315 | None:intergenic | 35.0% | |
ATAAGTTCATTCTTGCCCAA+TGG | + | chr5_4:6822297-6822316 | Msa0833720:three_prime_UTR | 35.0% | |
CAAGAAGTGACAATAACAAC+CGG | + | chr5_4:6822361-6822380 | Msa0833720:three_prime_UTR | 35.0% | |
TCCCAAACAAAACATCCACA+AGG | - | chr5_4:6811948-6811967 | None:intergenic | 40.0% | |
AGAGAAATTGTGAATGGCGA+GGG | - | chr5_4:6812011-6812030 | None:intergenic | 40.0% | |
!! | GAAGGTAGTGGAGAATTTGA+GGG | - | chr5_4:6812049-6812068 | None:intergenic | 40.0% |
!! | TGAAGGTAGTGGAGAATTTG+AGG | - | chr5_4:6812050-6812069 | None:intergenic | 40.0% |
!! | AGAGGATTTTGGTACTTGTC+TGG | - | chr5_4:6812207-6812226 | None:intergenic | 40.0% |
TTCAGATCCGAATAAGAGAC+AGG | + | chr5_4:6812284-6812303 | Msa0833720:CDS | 40.0% | |
TGAAGAGATTAAAGCCGAGT+TGG | + | chr5_4:6812374-6812393 | Msa0833720:CDS | 40.0% | |
AAGAAGGGAACATGAGAAGA+TGG | + | chr5_4:6812410-6812429 | Msa0833720:CDS | 40.0% | |
! | GTGGCAAGTTTTCAATCTTC+CGG | + | chr5_4:6812432-6812451 | Msa0833720:CDS | 40.0% |
! | TGGCAAGTTTTCAATCTTCC+GGG | + | chr5_4:6812433-6812452 | Msa0833720:CDS | 40.0% |
CAAATTAGCCAAAATCGTCC+CGG | - | chr5_4:6812454-6812473 | None:intergenic | 40.0% | |
!! | AGCTAGCTTGTAGTTGATAG+TGG | + | chr5_4:6812854-6812873 | Msa0833720:intron | 40.0% |
AAGTCCAGGGATTAATGAAC+TGG | + | chr5_4:6813030-6813049 | Msa0833720:intron | 40.0% | |
TTTATCCCATTAAGTGGGGT+CGG | - | chr5_4:6813100-6813119 | None:intergenic | 40.0% | |
GGACAAAAACTGAAATCTCC+TGG | + | chr5_4:6813223-6813242 | Msa0833720:intron | 40.0% | |
AAATATGTTCGTGGTCCAAG+AGG | + | chr5_4:6813285-6813304 | Msa0833720:intron | 40.0% | |
!! | TCCAAGAGGTGTCAGTTTAA+TGG | + | chr5_4:6813299-6813318 | Msa0833720:intron | 40.0% |
ACCATTAAACTGACACCTCT+TGG | - | chr5_4:6813303-6813322 | None:intergenic | 40.0% | |
AGCTGGACTTTGTAATCTCA+AGG | + | chr5_4:6813323-6813342 | Msa0833720:intron | 40.0% | |
GCTGGACTTTGTAATCTCAA+GGG | + | chr5_4:6813324-6813343 | Msa0833720:intron | 40.0% | |
! | GATGTTTCTGAGCATCAGAA+TGG | + | chr5_4:6813552-6813571 | Msa0833720:intron | 40.0% |
TTAGCAGTTGAAGGACATCA+AGG | + | chr5_4:6813637-6813656 | Msa0833720:CDS | 40.0% | |
TAATTGGAGTGCAGACATCA+CGG | + | chr5_4:6813746-6813765 | Msa0833720:CDS | 40.0% | |
AGTGTGATGATATAACGCTG+GGG | - | chr5_4:6813857-6813876 | None:intergenic | 40.0% | |
GAGTGTGATGATATAACGCT+GGG | - | chr5_4:6813858-6813877 | None:intergenic | 40.0% | |
TGAGTGTGATGATATAACGC+TGG | - | chr5_4:6813859-6813878 | None:intergenic | 40.0% | |
!! | CATTTGTTGTTTCTGACAGC+TGG | - | chr5_4:6813950-6813969 | None:intergenic | 40.0% |
CAGCTGTCAGAAACAACAAA+TGG | + | chr5_4:6813948-6813967 | Msa0833720:CDS | 40.0% | |
ATGTATGCTCTTCTATGCCT+TGG | + | chr5_4:6813973-6813992 | Msa0833720:intron | 40.0% | |
AAAGGAATGATCTGTCTGCA+TGG | + | chr5_4:6814221-6814240 | Msa0833720:intron | 40.0% | |
TGTTGGCCAATTCAAAGCAT+TGG | + | chr5_4:6814377-6814396 | Msa0833720:intron | 40.0% | |
!!! | TTTGGCTTTTTGTTGCCTCA+GGG | + | chr5_4:6814404-6814423 | Msa0833720:intron | 40.0% |
GGAAGAAAGAAGACGAGAAA+AGG | + | chr5_4:6814531-6814550 | Msa0833720:CDS | 40.0% | |
! | TCCACCATTCTACTCTGAAA+AGG | + | chr5_4:6814657-6814676 | Msa0833720:intron | 40.0% |
! | CCACCATTCTACTCTGAAAA+GGG | + | chr5_4:6814658-6814677 | Msa0833720:intron | 40.0% |
! | CACCATTCTACTCTGAAAAG+GGG | + | chr5_4:6814659-6814678 | Msa0833720:intron | 40.0% |
CTTTCTCAACTCCTTTAGCT+CGG | + | chr5_4:6814790-6814809 | Msa0833720:intron | 40.0% | |
TCTAAATCTCATGGCTGCAT+TGG | + | chr5_4:6814859-6814878 | Msa0833720:CDS | 40.0% | |
TGTCACTGTATTGTTGGCAA+AGG | + | chr5_4:6814973-6814992 | Msa0833720:intron | 40.0% | |
TTGTTGGCAAAGGTCTATTG+TGG | + | chr5_4:6814983-6815002 | Msa0833720:intron | 40.0% | |
!! | AAAAGGAGGTGTTGACTAGA+TGG | - | chr5_4:6815172-6815191 | None:intergenic | 40.0% |
! | CTGGGGTCTATTTTCTTGTT+GGG | + | chr5_4:6815300-6815319 | Msa0833720:intron | 40.0% |
TAAATTGAAAGGGAAAGGCC+AGG | + | chr5_4:6815415-6815434 | Msa0833720:intron | 40.0% | |
CATTCGGATTCTTAAAGCAG+TGG | + | chr5_4:6815457-6815476 | Msa0833720:intron | 40.0% | |
!! | TTTTCTGCAGATGGTAGTGT+TGG | + | chr5_4:6815549-6815568 | Msa0833720:intron | 40.0% |
AGGAAACATGTCTGTTGTCT+AGG | + | chr5_4:6815622-6815641 | Msa0833720:intron | 40.0% | |
TTCAGTGTAGAGGTGAAACT+TGG | + | chr5_4:6815693-6815712 | Msa0833720:intron | 40.0% | |
TGATACAGTCTCATCTTAGG+TGG | + | chr5_4:6815836-6815855 | Msa0833720:intron | 40.0% | |
!! | CTGGATCTCTCTTTAAGGTT+TGG | - | chr5_4:6815990-6816009 | None:intergenic | 40.0% |
! | AATACTTGATAGCCTGTAGG+TGG | + | chr5_4:6816073-6816092 | Msa0833720:intron | 40.0% |
CTATTAGCATAACCACCTAC+AGG | - | chr5_4:6816088-6816107 | None:intergenic | 40.0% | |
TCTTCCATTGAGATGGAAGT+TGG | + | chr5_4:6816201-6816220 | Msa0833720:CDS | 40.0% | |
GTTGTATGTAGTAGGACTTC+AGG | + | chr5_4:6816263-6816282 | Msa0833720:CDS | 40.0% | |
AGCCCCATGTGTAAAAAACA+GGG | - | chr5_4:6816584-6816603 | None:intergenic | 40.0% | |
TGAGGAAAAGGAGAGTGAAA+AGG | - | chr5_4:6816756-6816775 | None:intergenic | 40.0% | |
TCATGCCAGTCTCTTTAGTA+TGG | - | chr5_4:6816779-6816798 | None:intergenic | 40.0% | |
AAAGAGACTGGCATGATTTC+TGG | + | chr5_4:6816783-6816802 | Msa0833720:intron | 40.0% | |
AAGAGACTGGCATGATTTCT+GGG | + | chr5_4:6816784-6816803 | Msa0833720:intron | 40.0% | |
! | TCTGGGATGTGGTACTTTAA+TGG | + | chr5_4:6816882-6816901 | Msa0833720:intron | 40.0% |
ATAGGTGGAAACTGGAAACA+AGG | - | chr5_4:6816995-6817014 | None:intergenic | 40.0% | |
TTGTTTCCAGTTTCCACCTA+TGG | + | chr5_4:6816994-6817013 | Msa0833720:intron | 40.0% | |
!! | AACCTTTTCAGGGTATTTCC+TGG | + | chr5_4:6817163-6817182 | Msa0833720:intron | 40.0% |
AATGGTGTCTAGCATCTATC+AGG | - | chr5_4:6817259-6817278 | None:intergenic | 40.0% | |
!! | ATGACTTGTTGATCCAATGG+TGG | + | chr5_4:6817383-6817402 | Msa0833720:intron | 40.0% |
ACAAGTGTTCTTTCCACCAT+TGG | - | chr5_4:6817399-6817418 | None:intergenic | 40.0% | |
TTAAGCAACTCTTAGGGTAG+AGG | + | chr5_4:6817726-6817745 | Msa0833720:intron | 40.0% | |
GTTCACAAAGGAAGCTAAAC+AGG | - | chr5_4:6817803-6817822 | None:intergenic | 40.0% | |
! | TACAGTACCGAAGTTCACAA+AGG | - | chr5_4:6817815-6817834 | None:intergenic | 40.0% |
! | TTGAACCCTATGTTTGCTAC+TGG | + | chr5_4:6818003-6818022 | Msa0833720:CDS | 40.0% |
TTGCTTGCAATTGTCTCCAT+TGG | + | chr5_4:6818276-6818295 | Msa0833720:intron | 40.0% | |
GGAAAAAATGCCGCAGAAAA+AGG | + | chr5_4:6819093-6819112 | Msa0833720:intron | 40.0% | |
AAAAATGCCGCAGAAAAAGG+AGG | + | chr5_4:6819096-6819115 | Msa0833720:intron | 40.0% | |
! | CTTTCTTCCTCCTTTTTCTG+CGG | - | chr5_4:6819106-6819125 | None:intergenic | 40.0% |
TAACACTTCCTAAATGGTGG+TGG | + | chr5_4:6819153-6819172 | Msa0833720:intron | 40.0% | |
CAACTATGGCAGTAGCATAT+TGG | - | chr5_4:6819458-6819477 | None:intergenic | 40.0% | |
CAATATGCTACTGCCATAGT+TGG | + | chr5_4:6819456-6819475 | Msa0833720:intron | 40.0% | |
!! | TCTAGCTCCCTCTGTATTTT+GGG | - | chr5_4:6819612-6819631 | None:intergenic | 40.0% |
!!! | TTCTAGCTCCCTCTGTATTT+TGG | - | chr5_4:6819613-6819632 | None:intergenic | 40.0% |
CAGTTTGAGTCCTAATCATG+AGG | + | chr5_4:6819697-6819716 | Msa0833720:intron | 40.0% | |
CCTCATGATTAGGACTCAAA+CGG | - | chr5_4:6819700-6819719 | None:intergenic | 40.0% | |
ATGCACACATTTATGCAGAC+AGG | - | chr5_4:6819788-6819807 | None:intergenic | 40.0% | |
AACAAGCAATTAGAAACGGG+TGG | + | chr5_4:6819993-6820012 | Msa0833720:CDS | 40.0% | |
ACTTGTGATTCCGTTTACTG+TGG | + | chr5_4:6820521-6820540 | Msa0833720:intron | 40.0% | |
GGATCTCAAACCACAGTAAA+CGG | - | chr5_4:6820534-6820553 | None:intergenic | 40.0% | |
GTGGACAGATCAGAAATCAA+AGG | - | chr5_4:6820896-6820915 | None:intergenic | 40.0% | |
CCAGAACAAACAACAACCAA+GGG | - | chr5_4:6820925-6820944 | None:intergenic | 40.0% | |
GTTCTGGCAAAACTAACTGA+AGG | + | chr5_4:6820938-6820957 | Msa0833720:intron | 40.0% | |
TTGGTGTAAGTCTTTACACC+TGG | + | chr5_4:6821059-6821078 | Msa0833720:intron | 40.0% | |
! | GGTTGAAAGACCTTTCAAGT+AGG | - | chr5_4:6821510-6821529 | None:intergenic | 40.0% |
! | CACGAAGGTGTAAAGAAATC+AGG | + | chr5_4:6821716-6821735 | Msa0833720:CDS | 40.0% |
! | AGTTTAGTTTCTCCTGGACA+AGG | - | chr5_4:6821761-6821780 | None:intergenic | 40.0% |
TACAACCAACCAGATGCAAA+AGG | - | chr5_4:6821871-6821890 | None:intergenic | 40.0% | |
! | TTTGCATCTGGTTGGTTGTA+TGG | + | chr5_4:6821871-6821890 | Msa0833720:intron | 40.0% |
! | TTGCATCTGGTTGGTTGTAT+GGG | + | chr5_4:6821872-6821891 | Msa0833720:intron | 40.0% |
TGAACAATTAGTGATACCCC+AGG | + | chr5_4:6821934-6821953 | Msa0833720:CDS | 40.0% | |
GAACAATTAGTGATACCCCA+GGG | + | chr5_4:6821935-6821954 | Msa0833720:CDS | 40.0% | |
GTAAACAAGGCAAAACTGCA+GGG | - | chr5_4:6822011-6822030 | None:intergenic | 40.0% | |
TGTAAACAAGGCAAAACTGC+AGG | - | chr5_4:6822012-6822031 | None:intergenic | 40.0% | |
ACTGTTAGATGGAATGCAAG+AGG | + | chr5_4:6822054-6822073 | Msa0833720:three_prime_UTR | 40.0% | |
GCCTGAAAATTGTAGCTTGA+AGG | - | chr5_4:6822082-6822101 | None:intergenic | 40.0% | |
GCCCTGCAAATGATGAAATA+AGG | + | chr5_4:6822148-6822167 | Msa0833720:three_prime_UTR | 40.0% | |
! | GCCCTTATTTCATCATTTGC+AGG | - | chr5_4:6822153-6822172 | None:intergenic | 40.0% |
AAAATTGTGGTACAGCAGCA+GGG | - | chr5_4:6822231-6822250 | None:intergenic | 40.0% | |
TCTTCTCTTCCTTGGAGAGT+AGG | - | chr5_4:6811910-6811929 | None:intergenic | 45.0% | |
TGTGAATGGCGAGGGTTTAA+GGG | - | chr5_4:6812003-6812022 | None:intergenic | 45.0% | |
TTGTGAATGGCGAGGGTTTA+AGG | - | chr5_4:6812004-6812023 | None:intergenic | 45.0% | |
CAGAGAAATTGTGAATGGCG+AGG | - | chr5_4:6812012-6812031 | None:intergenic | 45.0% | |
GATGATGCGATTGAAGGTAG+TGG | - | chr5_4:6812061-6812080 | None:intergenic | 45.0% | |
CATTGGGATGATGCGATTGA+AGG | - | chr5_4:6812067-6812086 | None:intergenic | 45.0% | |
CAATCGCATCATCCCAATGA+TGG | + | chr5_4:6812068-6812087 | Msa0833720:exon | 45.0% | |
ATTTCTTCGTCGGAGGATTC+GGG | - | chr5_4:6812147-6812166 | None:intergenic | 45.0% | |
GATTTCTTCGTCGGAGGATT+CGG | - | chr5_4:6812148-6812167 | None:intergenic | 45.0% | |
AGCTTTGCGGATTTCTTCGT+CGG | - | chr5_4:6812157-6812176 | None:intergenic | 45.0% | |
TCCGCAAAGCTTATCGTCAA+TGG | + | chr5_4:6812166-6812185 | Msa0833720:CDS | 45.0% | |
CCCATTGACGATAAGCTTTG+CGG | - | chr5_4:6812170-6812189 | None:intergenic | 45.0% | |
CCGCAAAGCTTATCGTCAAT+GGG | + | chr5_4:6812167-6812186 | Msa0833720:CDS | 45.0% | |
GGTATGGAAGGGTTGAAATC+TGG | + | chr5_4:6812321-6812340 | Msa0833720:CDS | 45.0% | |
GGAAGGGTTGAAATCTGGTT+TGG | + | chr5_4:6812326-6812345 | Msa0833720:CDS | 45.0% | |
! | TTTGGAACTTGGTTCGAGGT+TGG | + | chr5_4:6812344-6812363 | Msa0833720:CDS | 45.0% |
! | AGATTAAAGCCGAGTTGGAG+AGG | + | chr5_4:6812379-6812398 | Msa0833720:CDS | 45.0% |
TCTCTTCAACCTCTCCAACT+CGG | - | chr5_4:6812391-6812410 | None:intergenic | 45.0% | |
TGGAGAGGTTGAAGAGAAGA+AGG | + | chr5_4:6812394-6812413 | Msa0833720:CDS | 45.0% | |
GGAGAGGTTGAAGAGAAGAA+GGG | + | chr5_4:6812395-6812414 | Msa0833720:CDS | 45.0% | |
AAGGGAACATGAGAAGATGG+TGG | + | chr5_4:6812413-6812432 | Msa0833720:CDS | 45.0% | |
! | TCAATCTTCCGGGACGATTT+TGG | + | chr5_4:6812443-6812462 | Msa0833720:CDS | 45.0% |
TCTGTGCCGCAGTATTTAGA+TGG | + | chr5_4:6812474-6812493 | Msa0833720:CDS | 45.0% | |
CCGTCACCATCTAAATACTG+CGG | - | chr5_4:6812483-6812502 | None:intergenic | 45.0% | |
CCGCAGTATTTAGATGGTGA+CGG | + | chr5_4:6812480-6812499 | Msa0833720:CDS | 45.0% | |
!! | ATGGTGACGGTCTCTTTAGA+GGG | + | chr5_4:6812493-6812512 | Msa0833720:CDS | 45.0% |
! | GTTGATAAGCGAACTGATCG+TGG | + | chr5_4:6812573-6812592 | Msa0833720:intron | 45.0% |
CACAGGGCATAATATCATCC+AGG | - | chr5_4:6813244-6813263 | None:intergenic | 45.0% | |
GGTGTCAGTTTAATGGTAGC+TGG | + | chr5_4:6813306-6813325 | Msa0833720:intron | 45.0% | |
GAGTTGAGATACCCATCCTT+AGG | + | chr5_4:6813498-6813517 | Msa0833720:intron | 45.0% | |
CGAAATGTTGTTGGGATTGG+CGG | + | chr5_4:6813610-6813629 | Msa0833720:CDS | 45.0% | |
! | GCCGGTTTACGTTCACTAAT+TGG | + | chr5_4:6813730-6813749 | Msa0833720:CDS | 45.0% |
!! | TTGTTGTTTCTGACAGCTGG+CGG | - | chr5_4:6813947-6813966 | None:intergenic | 45.0% |
TGGCTTTCAACCAGAAAACC+AGG | + | chr5_4:6814160-6814179 | Msa0833720:intron | 45.0% | |
!!! | GTTTGGCTTTTTGTTGCCTC+AGG | + | chr5_4:6814403-6814422 | Msa0833720:intron | 45.0% |
TCACAACCATCTGTAGCTGT+AGG | + | chr5_4:6814506-6814525 | Msa0833720:CDS | 45.0% | |
CACAACCATCTGTAGCTGTA+GGG | + | chr5_4:6814507-6814526 | Msa0833720:CDS | 45.0% | |
AAGTACCTTCACATCTGCAG+TGG | - | chr5_4:6814561-6814580 | None:intergenic | 45.0% | |
! | CCCTTTTCAGAGTAGAATGG+TGG | - | chr5_4:6814661-6814680 | None:intergenic | 45.0% |
! | CTCCCCTTTTCAGAGTAGAA+TGG | - | chr5_4:6814664-6814683 | None:intergenic | 45.0% |
AAATCTCATGGCTGCATTGG+AGG | + | chr5_4:6814862-6814881 | Msa0833720:CDS | 45.0% | |
GCTGCATTGGAGGAAGATTT+GGG | + | chr5_4:6814872-6814891 | Msa0833720:CDS | 45.0% | |
GTATGGAATGTCAGTGGCTA+AGG | - | chr5_4:6815256-6815275 | None:intergenic | 45.0% | |
GATGGTGTATGGAATGTCAG+TGG | - | chr5_4:6815262-6815281 | None:intergenic | 45.0% | |
! | GCTGGGGTCTATTTTCTTGT+TGG | + | chr5_4:6815299-6815318 | Msa0833720:intron | 45.0% |
!! | GGTAACTGCTTTTCTGCAGA+TGG | + | chr5_4:6815540-6815559 | Msa0833720:intron | 45.0% |
! | GGAGAGTATACAACTCCACA+AGG | + | chr5_4:6815714-6815733 | Msa0833720:intron | 45.0% |
TCCATTGAGATGGAAGTTGG+TGG | + | chr5_4:6816204-6816223 | Msa0833720:CDS | 45.0% | |
ACCACCAACTTCCATCTCAA+TGG | - | chr5_4:6816208-6816227 | None:intergenic | 45.0% | |
!! | ATTGAGATGGAAGTTGGTGG+TGG | + | chr5_4:6816207-6816226 | Msa0833720:CDS | 45.0% |
! | ACACTCTTTAAAAGGGCAGC+CGG | + | chr5_4:6816486-6816505 | Msa0833720:intron | 45.0% |
CCTACAACACACCAATTGGT+GGG | - | chr5_4:6816553-6816572 | None:intergenic | 45.0% | |
CAGCCCCATGTGTAAAAAAC+AGG | - | chr5_4:6816585-6816604 | None:intergenic | 45.0% | |
!! | TTACACATGGGGCTGTTTCT+AGG | + | chr5_4:6816590-6816609 | Msa0833720:intron | 45.0% |
GTTGTTGTCACGTGACTCAA+AGG | - | chr5_4:6816618-6816637 | None:intergenic | 45.0% | |
GAGAGTGAAAAGGCTAGTGT+AGG | - | chr5_4:6816746-6816765 | None:intergenic | 45.0% | |
CCAGTCTCTTTAGTATGGTG+AGG | - | chr5_4:6816774-6816793 | None:intergenic | 45.0% | |
CCTCACCATACTAAAGAGAC+TGG | + | chr5_4:6816771-6816790 | Msa0833720:intron | 45.0% | |
AGAGACTGGCATGATTTCTG+GGG | + | chr5_4:6816785-6816804 | Msa0833720:intron | 45.0% | |
!! | GAACCCTAAAGTGTTGGGAA+GGG | - | chr5_4:6817048-6817067 | None:intergenic | 45.0% |
CTCCAGGAAATACCCTGAAA+AGG | - | chr5_4:6817168-6817187 | None:intergenic | 45.0% | |
GTGGAAAGAACACTTGTGCA+TGG | + | chr5_4:6817402-6817421 | Msa0833720:intron | 45.0% | |
CAAAGGAAGCTAAACAGGGT+AGG | - | chr5_4:6817798-6817817 | None:intergenic | 45.0% | |
ACGCTCCAGTAGCAAACATA+GGG | - | chr5_4:6818011-6818030 | None:intergenic | 45.0% | |
AACGCTCCAGTAGCAAACAT+AGG | - | chr5_4:6818012-6818031 | None:intergenic | 45.0% | |
!! | TAAGCAGAAGGCTCTAGAGA+AGG | + | chr5_4:6818719-6818738 | Msa0833720:CDS | 45.0% |
GGAGGGAAAAACTTCTACTC+AGG | + | chr5_4:6818740-6818759 | Msa0833720:CDS | 45.0% | |
!! | TCCTAAATGGTGGTGGTTGT+CGG | + | chr5_4:6819160-6819179 | Msa0833720:intron | 45.0% |
! | AAACATGTTGGCCTGGGTTT+GGG | + | chr5_4:6819339-6819358 | Msa0833720:intron | 45.0% |
ATGAAGTTGGATGGCCATAG+CGG | - | chr5_4:6819416-6819435 | None:intergenic | 45.0% | |
GCAGACACAATGAAGTTGGA+TGG | - | chr5_4:6819425-6819444 | None:intergenic | 45.0% | |
CATGGCAGACACAATGAAGT+TGG | - | chr5_4:6819429-6819448 | None:intergenic | 45.0% | |
AGCACTAGCCCAAAATACAG+AGG | + | chr5_4:6819601-6819620 | Msa0833720:intron | 45.0% | |
GCACTAGCCCAAAATACAGA+GGG | + | chr5_4:6819602-6819621 | Msa0833720:intron | 45.0% | |
CACAGCCAAGAACTAAAAGG+AGG | - | chr5_4:6819653-6819672 | None:intergenic | 45.0% | |
CCGTTTGAGTCCTAATCATG+AGG | + | chr5_4:6819739-6819758 | Msa0833720:intron | 45.0% | |
TTGTGCAGGTTCAAGAAGCA+AGG | + | chr5_4:6819916-6819935 | Msa0833720:intron | 45.0% | |
TGTGCAGGTTCAAGAAGCAA+GGG | + | chr5_4:6819917-6819936 | Msa0833720:intron | 45.0% | |
! | AGACTTACACCTGGTGTCAA+CGG | - | chr5_4:6820378-6820397 | None:intergenic | 45.0% |
!! | CCCTTGGTTGTTGTTTGTTC+TGG | + | chr5_4:6820922-6820941 | Msa0833720:intron | 45.0% |
GCCAGAACAAACAACAACCA+AGG | - | chr5_4:6820926-6820945 | None:intergenic | 45.0% | |
CCACATAAGGAACACATCAC+AGG | - | chr5_4:6820995-6821014 | None:intergenic | 45.0% | |
CCTGTGATGTGTTCCTTATG+TGG | + | chr5_4:6820992-6821011 | Msa0833720:intron | 45.0% | |
! | GTCTTTACACCTGGTGTCAA+CGG | + | chr5_4:6821068-6821087 | Msa0833720:intron | 45.0% |
TGCATCTTCGCGATAAAGGA+AGG | - | chr5_4:6821483-6821502 | None:intergenic | 45.0% | |
! | TGGGAGCACACCTGAAATAA+TGG | + | chr5_4:6821669-6821688 | Msa0833720:intron | 45.0% |
TTGTTGATGCAGCTTCACGA+AGG | + | chr5_4:6821701-6821720 | Msa0833720:intron | 45.0% | |
! | GGATTTTGTGATCCTTGTCC+AGG | + | chr5_4:6821746-6821765 | Msa0833720:CDS | 45.0% |
TATGTAGAGTACGCTCATGC+CGG | + | chr5_4:6821785-6821804 | Msa0833720:CDS | 45.0% | |
TTATATCCTGTGGATGCCCT+GGG | - | chr5_4:6821954-6821973 | None:intergenic | 45.0% | |
TTTATATCCTGTGGATGCCC+TGG | - | chr5_4:6821955-6821974 | None:intergenic | 45.0% | |
!! | AGCTACAATTTTCAGGCCAG+TGG | + | chr5_4:6822085-6822104 | Msa0833720:three_prime_UTR | 45.0% |
!! | GCTACAATTTTCAGGCCAGT+GGG | + | chr5_4:6822086-6822105 | Msa0833720:three_prime_UTR | 45.0% |
CAAAATTGTGGTACAGCAGC+AGG | - | chr5_4:6822232-6822251 | None:intergenic | 45.0% | |
ACGGCACTCGATGTTATTAC+CGG | - | chr5_4:6822383-6822402 | None:intergenic | 45.0% | |
!!! | TTTATTTTTTTAAATAATTG+AGG | - | chr5_4:6813425-6813444 | None:intergenic | 5.0% |
!! | TTTCATTATTTATTAAATAT+TGG | - | chr5_4:6819045-6819064 | None:intergenic | 5.0% |
!! | TATTTAATAAATAATGAAAA+AGG | + | chr5_4:6819046-6819065 | Msa0833720:intron | 5.0% |
CAACGTTGTCCTACTCTCCA+AGG | + | chr5_4:6811898-6811917 | Msa0833720:five_prime_UTR | 50.0% | |
CTCCAAGGAAGAGAAGAGAG+TGG | + | chr5_4:6811913-6811932 | Msa0833720:five_prime_UTR | 50.0% | |
GTCCACTCTCTTCTCTTCCT+TGG | - | chr5_4:6811918-6811937 | None:intergenic | 50.0% | |
GAGTGGACCAAGATACCTTG+TGG | + | chr5_4:6811930-6811949 | Msa0833720:five_prime_UTR | 50.0% | |
TTTGCGGATTTCTTCGTCGG+AGG | - | chr5_4:6812154-6812173 | None:intergenic | 50.0% | |
GTGGCAGCATCTTTCATGAG+AGG | - | chr5_4:6812225-6812244 | None:intergenic | 50.0% | |
!! | CTGGTTTGGAACTTGGTTCG+AGG | + | chr5_4:6812340-6812359 | Msa0833720:CDS | 50.0% |
!! | GATGGTGACGGTCTCTTTAG+AGG | + | chr5_4:6812492-6812511 | Msa0833720:CDS | 50.0% |
! | GACGGTCTCTTTAGAGGGTA+TGG | + | chr5_4:6812498-6812517 | Msa0833720:intron | 50.0% |
! | AGCTAGCTTGTAGTTGGCAG+CGG | + | chr5_4:6812620-6812639 | Msa0833720:intron | 50.0% |
ATGTAGCCGACCCCACTTAA+TGG | + | chr5_4:6813091-6813110 | Msa0833720:intron | 50.0% | |
TGTAGCCGACCCCACTTAAT+GGG | + | chr5_4:6813092-6813111 | Msa0833720:intron | 50.0% | |
GGCGGCAATTTAGCAGTTGA+AGG | + | chr5_4:6813628-6813647 | Msa0833720:CDS | 50.0% | |
GCAGTTGAAGGACATCAAGG+TGG | + | chr5_4:6813640-6813659 | Msa0833720:CDS | 50.0% | |
GTTGAAGGACATCAAGGTGG+TGG | + | chr5_4:6813643-6813662 | Msa0833720:CDS | 50.0% | |
TCACACTCATCTGCAACAGC+AGG | + | chr5_4:6813870-6813889 | Msa0833720:CDS | 50.0% | |
!! | TGTTGTTTCTGACAGCTGGC+GGG | - | chr5_4:6813946-6813965 | None:intergenic | 50.0% |
TGGTTGAAAGCCAGATGCAG+TGG | - | chr5_4:6814153-6814172 | None:intergenic | 50.0% | |
AACCATCTGTAGCTGTAGGG+TGG | + | chr5_4:6814510-6814529 | Msa0833720:CDS | 50.0% | |
TTCCACCCTACAGCTACAGA+TGG | - | chr5_4:6814515-6814534 | None:intergenic | 50.0% | |
GTCCTTTCGAGACATCAGCT+CGG | + | chr5_4:6814818-6814837 | Msa0833720:CDS | 50.0% | |
TACCGAGCTGATGTCTCGAA+AGG | - | chr5_4:6814823-6814842 | None:intergenic | 50.0% | |
GGCTGCATTGGAGGAAGATT+TGG | + | chr5_4:6814871-6814890 | Msa0833720:CDS | 50.0% | |
GCATTGGAGGAAGATTTGGG+AGG | + | chr5_4:6814875-6814894 | Msa0833720:CDS | 50.0% | |
GGAAAGGCCAGGATAAAGTG+TGG | + | chr5_4:6815426-6815445 | Msa0833720:intron | 50.0% | |
AGCAGCTCCACACTTTATCC+TGG | - | chr5_4:6815436-6815455 | None:intergenic | 50.0% | |
AAGTGTGGAGCTGCTGCATT+CGG | + | chr5_4:6815441-6815460 | Msa0833720:intron | 50.0% | |
CTTAGGTGGTTTGACATGCG+TGG | + | chr5_4:6815850-6815869 | Msa0833720:intron | 50.0% | |
CTCCTAAGTAGTGCTTCCCT+GGG | - | chr5_4:6815882-6815901 | None:intergenic | 50.0% | |
TCTCCTAAGTAGTGCTTCCC+TGG | - | chr5_4:6815883-6815902 | None:intergenic | 50.0% | |
!! | AGATGGAAGTTGGTGGTGGA+AGG | + | chr5_4:6816211-6816230 | Msa0833720:CDS | 50.0% |
! | CCAGCGCACAGTACTGAATT+TGG | - | chr5_4:6816244-6816263 | None:intergenic | 50.0% |
CCAAATTCAGTACTGTGCGC+TGG | + | chr5_4:6816241-6816260 | Msa0833720:CDS | 50.0% | |
!! | GTGCGCTGGTTGTATGTAGT+AGG | + | chr5_4:6816255-6816274 | Msa0833720:CDS | 50.0% |
! | CACTCTTTAAAAGGGCAGCC+GGG | + | chr5_4:6816487-6816506 | Msa0833720:intron | 50.0% |
CCCACCAATTGGTGTGTTGT+AGG | + | chr5_4:6816550-6816569 | Msa0833720:intron | 50.0% | |
GCCTACAACACACCAATTGG+TGG | - | chr5_4:6816554-6816573 | None:intergenic | 50.0% | |
GCTGCCTACAACACACCAAT+TGG | - | chr5_4:6816557-6816576 | None:intergenic | 50.0% | |
ACAACTTTACCGTTGCGCCA+AGG | + | chr5_4:6816633-6816652 | Msa0833720:intron | 50.0% | |
TGTTAGAAAAGGGGGAGCCT+TGG | - | chr5_4:6816653-6816672 | None:intergenic | 50.0% | |
ACGGGTCCAACATGATTCAG+TGG | - | chr5_4:6816708-6816727 | None:intergenic | 50.0% | |
GGGAAGGGAGGATCATGAAA+TGG | - | chr5_4:6817033-6817052 | None:intergenic | 50.0% | |
TCCTCCCTTCCCAACACTTT+AGG | + | chr5_4:6817041-6817060 | Msa0833720:intron | 50.0% | |
CCTCCCTTCCCAACACTTTA+GGG | + | chr5_4:6817042-6817061 | Msa0833720:intron | 50.0% | |
!! | GGAACCCTAAAGTGTTGGGA+AGG | - | chr5_4:6817049-6817068 | None:intergenic | 50.0% |
! | GGGAGGAACCCTAAAGTGTT+GGG | - | chr5_4:6817053-6817072 | None:intergenic | 50.0% |
AGGGAGGAACCCTAAAGTGT+TGG | - | chr5_4:6817054-6817073 | None:intergenic | 50.0% | |
TGCATTGAACCCTAACGCGT+GGG | - | chr5_4:6817079-6817098 | None:intergenic | 50.0% | |
TTGCATTGAACCCTAACGCG+TGG | - | chr5_4:6817080-6817099 | None:intergenic | 50.0% | |
!! | CAGAAGGCTCTAGAGAAGGA+GGG | + | chr5_4:6818723-6818742 | Msa0833720:CDS | 50.0% |
TCCGACAACCACCACCATTT+AGG | - | chr5_4:6819164-6819183 | None:intergenic | 50.0% | |
!! | TAAATGGTGGTGGTTGTCGG+AGG | + | chr5_4:6819163-6819182 | Msa0833720:intron | 50.0% |
! | GAAACATGTTGGCCTGGGTT+TGG | + | chr5_4:6819338-6819357 | Msa0833720:intron | 50.0% |
GCATTGAACTTGTGACTCGC+AGG | - | chr5_4:6819497-6819516 | None:intergenic | 50.0% | |
AAAGGGGAACTAAAGGCCAC+TGG | - | chr5_4:6819561-6819580 | None:intergenic | 50.0% | |
TTCTTGAACCTGCACAACCG+GGG | - | chr5_4:6819913-6819932 | None:intergenic | 50.0% | |
CTTCTTGAACCTGCACAACC+GGG | - | chr5_4:6819914-6819933 | None:intergenic | 50.0% | |
GCTTCTTGAACCTGCACAAC+CGG | - | chr5_4:6819915-6819934 | None:intergenic | 50.0% | |
GCAATTAGAAACGGGTGGAC+TGG | + | chr5_4:6819998-6820017 | Msa0833720:CDS | 50.0% | |
ATCTGTCCACACACAACCCT+TGG | + | chr5_4:6820906-6820925 | Msa0833720:intron | 50.0% | |
CAACAACCAAGGGTTGTGTG+TGG | - | chr5_4:6820915-6820934 | None:intergenic | 50.0% | |
AGAGAGAGAGAGAGAGAGTC+AGG | - | chr5_4:6821096-6821115 | None:intergenic | 50.0% | |
TCATGCCGGCAATCAACACA+AGG | + | chr5_4:6821799-6821818 | Msa0833720:CDS | 50.0% | |
TATATCCTGTGGATGCCCTG+GGG | - | chr5_4:6821953-6821972 | None:intergenic | 50.0% | |
CATTTGCAGGGCGTAACAGA+AGG | - | chr5_4:6822140-6822159 | None:intergenic | 50.0% | |
GGCGAGGGTTTAAGGGTGAA+AGG | - | chr5_4:6811996-6812015 | None:intergenic | 55.0% | |
AGGATTCGGGTGAGAGGTTG+AGG | - | chr5_4:6812134-6812153 | None:intergenic | 55.0% | |
TGGAGTGCAGACATCACGGT+TGG | + | chr5_4:6813750-6813769 | Msa0833720:intron | 55.0% | |
GACTGCCACTGCAGATGTGA+AGG | + | chr5_4:6814553-6814572 | Msa0833720:CDS | 55.0% | |
! | CAACTCCTTTAGCTCGGCAC+AGG | + | chr5_4:6814796-6814815 | Msa0833720:intron | 55.0% |
AAGGACCTGTGCCGAGCTAA+AGG | - | chr5_4:6814804-6814823 | None:intergenic | 55.0% | |
!! | GACCCAGGGAAGCACTACTT+AGG | + | chr5_4:6815877-6815896 | Msa0833720:intron | 55.0% |
ACTAATGCTCCCGCATACGC+AGG | + | chr5_4:6816513-6816532 | Msa0833720:intron | 55.0% | |
CTAATGCTCCCGCATACGCA+GGG | + | chr5_4:6816514-6816533 | Msa0833720:intron | 55.0% | |
!! | CCCTAAAGTGTTGGGAAGGG+AGG | - | chr5_4:6817045-6817064 | None:intergenic | 55.0% |
GCATTGAACCCTAACGCGTG+GGG | - | chr5_4:6817078-6817097 | None:intergenic | 55.0% | |
!! | GCAGAAGGCTCTAGAGAAGG+AGG | + | chr5_4:6818722-6818741 | Msa0833720:CDS | 55.0% |
TTGAGACCTGACCCAAACCC+AGG | - | chr5_4:6819353-6819372 | None:intergenic | 55.0% | |
TGGGTTTGGGTCAGGTCTCA+AGG | + | chr5_4:6819352-6819371 | Msa0833720:intron | 55.0% | |
AGTCAGGATCCGTTGACACC+AGG | + | chr5_4:6820366-6820385 | Msa0833720:intron | 55.0% | |
AGTCAGGATCCGTTGACACC+AGG | - | chr5_4:6820366-6820385 | None:intergenic | 55.0% | |
ACATGCGTGGAGACGACCCA+GGG | + | chr5_4:6815863-6815882 | Msa0833720:intron | 60.0% | |
!! | TGCGGGAGCATTAGTGCACC+CGG | - | chr5_4:6816508-6816527 | None:intergenic | 60.0% |
TTCCTGGACCCTGCGTATGC+GGG | - | chr5_4:6816525-6816544 | None:intergenic | 60.0% | |
CTTCCTGGACCCTGCGTATG+CGG | - | chr5_4:6816526-6816545 | None:intergenic | 60.0% | |
GCATACGCAGGGTCCAGGAA+GGG | + | chr5_4:6816525-6816544 | Msa0833720:intron | 60.0% | |
CATACGCAGGGTCCAGGAAG+GGG | + | chr5_4:6816526-6816545 | Msa0833720:intron | 60.0% | |
CAATTGGTGGGACCCCTTCC+TGG | - | chr5_4:6816541-6816560 | None:intergenic | 60.0% | |
CAGGAAGGGGTCCCACCAAT+TGG | + | chr5_4:6816539-6816558 | Msa0833720:intron | 60.0% | |
GAACCCTAACGCGTGGGGAA+GGG | - | chr5_4:6817073-6817092 | None:intergenic | 60.0% | |
TGAACCCTAACGCGTGGGGA+AGG | - | chr5_4:6817074-6817093 | None:intergenic | 60.0% | |
! | TGTTGGCCTGGGTTTGGGTC+AGG | + | chr5_4:6819344-6819363 | Msa0833720:intron | 60.0% |
AACCGGGGAAGCAGAGGAAG+GGG | - | chr5_4:6819898-6819917 | None:intergenic | 60.0% | |
CAACCGGGGAAGCAGAGGAA+GGG | - | chr5_4:6819899-6819918 | None:intergenic | 60.0% | |
ACAACCGGGGAAGCAGAGGA+AGG | - | chr5_4:6819900-6819919 | None:intergenic | 60.0% | |
! | TGATACCCCAGGGCATCCAC+AGG | + | chr5_4:6821945-6821964 | Msa0833720:CDS | 60.0% |
CGTCGGAGGATTCGGGTGAG+AGG | - | chr5_4:6812140-6812159 | None:intergenic | 65.0% | |
GACATGCGTGGAGACGACCC+AGG | + | chr5_4:6815862-6815881 | Msa0833720:intron | 65.0% | |
CGCATACGCAGGGTCCAGGA+AGG | + | chr5_4:6816524-6816543 | Msa0833720:intron | 65.0% | |
AAGGGGGAGCCTTGGCGCAA+CGG | - | chr5_4:6816645-6816664 | None:intergenic | 65.0% | |
TCCTCCCTTCCCCACGCGTT+AGG | + | chr5_4:6817066-6817085 | Msa0833720:intron | 65.0% | |
CCTCCCTTCCCCACGCGTTA+GGG | + | chr5_4:6817067-6817086 | Msa0833720:intron | 65.0% | |
ACCCCCTTCCTCTGCTTCCC+CGG | + | chr5_4:6819893-6819912 | Msa0833720:intron | 65.0% | |
ACCGGGGAAGCAGAGGAAGG+GGG | - | chr5_4:6819897-6819916 | None:intergenic | 65.0% | |
CTGCACAACCGGGGAAGCAG+AGG | - | chr5_4:6819904-6819923 | None:intergenic | 65.0% | |
CTCTGCTTCCCCGGTTGTGC+AGG | + | chr5_4:6819902-6819921 | Msa0833720:intron | 65.0% | |
CTCCCGCATACGCAGGGTCC+AGG | + | chr5_4:6816520-6816539 | Msa0833720:intron | 70.0% | |
CCCTAACGCGTGGGGAAGGG+AGG | - | chr5_4:6817070-6817089 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_4 | gene | 6811898 | 6822447 | 6811898 | ID=Msa0833720;Name=Msa0833720 |
chr5_4 | mRNA | 6811898 | 6822447 | 6811898 | ID=Msa0833720-mRNA-1;Parent=Msa0833720;Name=Msa0833720-mRNA-1;_AED=0.03;_eAED=0.03;_QI=186|1|1|1|0.90|0.91|12|474|540 |
chr5_4 | exon | 6811898 | 6812514 | 6811898 | ID=Msa0833720-mRNA-1:exon:2994;Parent=Msa0833720-mRNA-1 |
chr5_4 | exon | 6813570 | 6813767 | 6813570 | ID=Msa0833720-mRNA-1:exon:2995;Parent=Msa0833720-mRNA-1 |
chr5_4 | exon | 6813860 | 6813974 | 6813860 | ID=Msa0833720-mRNA-1:exon:2996;Parent=Msa0833720-mRNA-1 |
chr5_4 | exon | 6814488 | 6814574 | 6814488 | ID=Msa0833720-mRNA-1:exon:2997;Parent=Msa0833720-mRNA-1 |
chr5_4 | exon | 6814808 | 6814896 | 6814808 | ID=Msa0833720-mRNA-1:exon:2998;Parent=Msa0833720-mRNA-1 |
chr5_4 | exon | 6816200 | 6816284 | 6816200 | ID=Msa0833720-mRNA-1:exon:2999;Parent=Msa0833720-mRNA-1 |
chr5_4 | exon | 6817174 | 6817227 | 6817174 | ID=Msa0833720-mRNA-1:exon:3000;Parent=Msa0833720-mRNA-1 |
chr5_4 | exon | 6817985 | 6818065 | 6817985 | ID=Msa0833720-mRNA-1:exon:3001;Parent=Msa0833720-mRNA-1 |
chr5_4 | exon | 6818684 | 6818761 | 6818684 | ID=Msa0833720-mRNA-1:exon:3002;Parent=Msa0833720-mRNA-1 |
chr5_4 | exon | 6819924 | 6820163 | 6819924 | ID=Msa0833720-mRNA-1:exon:3003;Parent=Msa0833720-mRNA-1 |
chr5_4 | exon | 6821713 | 6821820 | 6821713 | ID=Msa0833720-mRNA-1:exon:3004;Parent=Msa0833720-mRNA-1 |
chr5_4 | exon | 6821917 | 6822447 | 6821917 | ID=Msa0833720-mRNA-1:exon:3005;Parent=Msa0833720-mRNA-1 |
chr5_4 | five_prime_UTR | 6811898 | 6812083 | 6811898 | ID=Msa0833720-mRNA-1:five_prime_utr;Parent=Msa0833720-mRNA-1 |
chr5_4 | CDS | 6812084 | 6812514 | 6812084 | ID=Msa0833720-mRNA-1:cds;Parent=Msa0833720-mRNA-1 |
chr5_4 | CDS | 6813570 | 6813767 | 6813570 | ID=Msa0833720-mRNA-1:cds;Parent=Msa0833720-mRNA-1 |
chr5_4 | CDS | 6813860 | 6813974 | 6813860 | ID=Msa0833720-mRNA-1:cds;Parent=Msa0833720-mRNA-1 |
chr5_4 | CDS | 6814488 | 6814574 | 6814488 | ID=Msa0833720-mRNA-1:cds;Parent=Msa0833720-mRNA-1 |
chr5_4 | CDS | 6814808 | 6814896 | 6814808 | ID=Msa0833720-mRNA-1:cds;Parent=Msa0833720-mRNA-1 |
chr5_4 | CDS | 6816200 | 6816284 | 6816200 | ID=Msa0833720-mRNA-1:cds;Parent=Msa0833720-mRNA-1 |
chr5_4 | CDS | 6817174 | 6817227 | 6817174 | ID=Msa0833720-mRNA-1:cds;Parent=Msa0833720-mRNA-1 |
chr5_4 | CDS | 6817985 | 6818065 | 6817985 | ID=Msa0833720-mRNA-1:cds;Parent=Msa0833720-mRNA-1 |
chr5_4 | CDS | 6818684 | 6818761 | 6818684 | ID=Msa0833720-mRNA-1:cds;Parent=Msa0833720-mRNA-1 |
chr5_4 | CDS | 6819924 | 6820163 | 6819924 | ID=Msa0833720-mRNA-1:cds;Parent=Msa0833720-mRNA-1 |
chr5_4 | CDS | 6821713 | 6821820 | 6821713 | ID=Msa0833720-mRNA-1:cds;Parent=Msa0833720-mRNA-1 |
chr5_4 | CDS | 6821917 | 6821973 | 6821917 | ID=Msa0833720-mRNA-1:cds;Parent=Msa0833720-mRNA-1 |
chr5_4 | three_prime_UTR | 6821974 | 6822447 | 6821974 | ID=Msa0833720-mRNA-1:three_prime_utr;Parent=Msa0833720-mRNA-1 |
Gene Sequence |
Protein sequence |