Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0795820 | XP_003611304.2 | 97.416 | 503 | 13 | 0 | 4 | 506 | 38 | 540 | 0.0 | 1024 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0795820 | sp|Q39079|DNJ13_ARATH | 61.972 | 497 | 186 | 1 | 5 | 501 | 42 | 535 | 0.0 | 639 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0795820 | G7JW29 | 97.416 | 503 | 13 | 0 | 4 | 506 | 38 | 540 | 0.0 | 1024 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0010490 | Msa0795820 | 0.814706 | 1.344267e-51 | -8.615850e-47 |
Msa0010500 | Msa0795820 | 0.801811 | 7.550276e-49 | -8.615850e-47 |
Msa0011960 | Msa0795820 | 0.810070 | 1.383739e-50 | -8.615850e-47 |
Msa0019390 | Msa0795820 | 0.807370 | 5.224005e-50 | -8.615850e-47 |
Msa0021220 | Msa0795820 | 0.824353 | 8.449636e-54 | -8.615850e-47 |
Msa0027770 | Msa0795820 | 0.810303 | 1.232842e-50 | -8.615850e-47 |
Msa0032580 | Msa0795820 | 0.817818 | 2.706958e-52 | -8.615850e-47 |
Msa0033950 | Msa0795820 | 0.820055 | 8.394842e-53 | -8.615850e-47 |
Msa0034030 | Msa0795820 | 0.819154 | 1.347845e-52 | -8.615850e-47 |
Msa0037770 | Msa0795820 | 0.806987 | 6.299498e-50 | -8.615850e-47 |
Msa0043660 | Msa0795820 | 0.850558 | 1.570963e-60 | -8.615850e-47 |
Msa0047160 | Msa0795820 | 0.804776 | 1.836785e-49 | -8.615850e-47 |
Msa0067630 | Msa0795820 | 0.801881 | 7.305219e-49 | -8.615850e-47 |
Msa0075500 | Msa0795820 | 0.820501 | 6.632979e-53 | -8.615850e-47 |
Msa0076780 | Msa0795820 | 0.813445 | 2.550355e-51 | -8.615850e-47 |
Msa0105620 | Msa0795820 | 0.805435 | 1.336969e-49 | -8.615850e-47 |
Msa0115130 | Msa0795820 | 0.842697 | 2.206627e-58 | -8.615850e-47 |
Msa0605000 | Msa0795820 | 0.870034 | 1.978485e-66 | -8.615850e-47 |
Msa0660850 | Msa0795820 | 0.805203 | 1.495151e-49 | -8.615850e-47 |
Msa0685140 | Msa0795820 | 0.875975 | 2.015316e-68 | -8.615850e-47 |
Msa0689260 | Msa0795820 | 0.816089 | 6.617992e-52 | -8.615850e-47 |
Msa0698800 | Msa0795820 | 0.817504 | 3.186330e-52 | -8.615850e-47 |
Msa0711780 | Msa0795820 | 0.824061 | 9.898684e-54 | -8.615850e-47 |
Msa0715650 | Msa0795820 | 0.825149 | 5.485512e-54 | -8.615850e-47 |
Msa0719420 | Msa0795820 | 0.855373 | 6.591501e-62 | -8.615850e-47 |
Msa0719610 | Msa0795820 | 0.832586 | 8.685377e-56 | -8.615850e-47 |
Msa0753140 | Msa0795820 | 0.837238 | 5.847434e-57 | -8.615850e-47 |
Msa0763330 | Msa0795820 | 0.852581 | 4.202561e-61 | -8.615850e-47 |
Msa0772480 | Msa0795820 | 0.850172 | 2.015826e-60 | -8.615850e-47 |
Msa0789680 | Msa0795820 | 0.856482 | 3.123723e-62 | -8.615850e-47 |
Msa0794670 | Msa0795820 | 0.817364 | 3.426664e-52 | -8.615850e-47 |
Msa0795820 | Msa0796210 | 0.841291 | 5.193928e-58 | -8.615850e-47 |
Msa0795820 | Msa0798440 | 0.849660 | 2.803834e-60 | -8.615850e-47 |
Msa0795820 | Msa0799260 | 0.808461 | 3.062940e-50 | -8.615850e-47 |
Msa0795820 | Msa0799310 | 0.808919 | 2.444437e-50 | -8.615850e-47 |
Msa0795820 | Msa0802410 | 0.856081 | 4.093281e-62 | -8.615850e-47 |
Msa0795820 | Msa0830040 | 0.805918 | 1.058441e-49 | -8.615850e-47 |
Msa0795820 | Msa0830540 | 0.872999 | 2.064513e-67 | -8.615850e-47 |
Msa0795820 | Msa0833720 | 0.892368 | 1.693559e-74 | -8.615850e-47 |
Msa0795820 | Msa0880730 | 0.818524 | 1.873831e-52 | -8.615850e-47 |
Msa0795820 | Msa0887250 | 0.815885 | 7.350370e-52 | -8.615850e-47 |
Msa0795820 | Msa0925770 | 0.835198 | 1.929433e-56 | -8.615850e-47 |
Msa0795820 | Msa0945440 | 0.872970 | 2.112212e-67 | -8.615850e-47 |
Msa0795820 | Msa0966010 | 0.810303 | 1.232907e-50 | -8.615850e-47 |
Msa0795820 | Msa0989540 | 0.846993 | 1.531875e-59 | -8.615850e-47 |
Msa0795820 | Msa1077030 | 0.802565 | 5.282819e-49 | -8.615850e-47 |
Msa0795820 | Msa1132660 | 0.940638 | 1.656274e-100 | -8.615850e-47 |
Msa0795820 | Msa1137700 | 0.812977 | 3.231470e-51 | -8.615850e-47 |
Msa0795820 | Msa1160590 | 0.818857 | 1.574621e-52 | -8.615850e-47 |
Msa0795820 | Msa1181250 | 0.828185 | 1.034714e-54 | -8.615850e-47 |
Msa0795820 | Msa1181330 | 0.824078 | 9.807890e-54 | -8.615850e-47 |
Msa0795820 | Msa1197320 | 0.836365 | 9.768304e-57 | -8.615850e-47 |
Msa0795820 | Msa1209200 | 0.832407 | 9.621533e-56 | -8.615850e-47 |
Msa0795820 | Msa1209260 | 0.888949 | 3.747302e-73 | -8.615850e-47 |
Msa0795820 | Msa1209760 | 0.810522 | 1.105323e-50 | -8.615850e-47 |
Msa0795820 | Msa1218500 | 0.823444 | 1.380363e-53 | -8.615850e-47 |
Msa0795820 | Msa1219170 | 0.816732 | 4.752395e-52 | -8.615850e-47 |
Msa0795820 | Msa1224810 | 0.813271 | 2.785110e-51 | -8.615850e-47 |
Msa0795820 | Msa1245930 | 0.801671 | 8.066887e-49 | -8.615850e-47 |
Msa0795820 | Msa1250790 | 0.814896 | 1.219942e-51 | -8.615850e-47 |
Msa0795820 | Msa1259060 | 0.816329 | 5.849337e-52 | -8.615850e-47 |
Msa0795820 | Msa1265630 | 0.804106 | 2.533516e-49 | -8.615850e-47 |
Msa0795820 | Msa1351540 | 0.804885 | 1.742944e-49 | -8.615850e-47 |
Msa0795820 | Msa1358250 | 0.818828 | 1.598949e-52 | -8.615850e-47 |
Msa0795820 | Msa1362090 | 0.823814 | 1.131020e-53 | -8.615850e-47 |
Msa0795820 | Msa1400220 | 0.819147 | 1.353194e-52 | -8.615850e-47 |
Msa0795820 | Msa1400580 | 0.820622 | 6.223425e-53 | -8.615850e-47 |
Msa0795820 | Msa1419870 | 0.832757 | 7.880255e-56 | -8.615850e-47 |
Msa0795820 | Msa1436520 | 0.846698 | 1.843970e-59 | -8.615850e-47 |
Msa0795820 | Msa1457920 | 0.820308 | 7.347410e-53 | -8.615850e-47 |
Msa0127020 | Msa0795820 | 0.828734 | 7.625627e-55 | -8.615850e-47 |
Msa0128050 | Msa0795820 | 0.814684 | 1.358796e-51 | -8.615850e-47 |
Msa0137550 | Msa0795820 | 0.841647 | 4.185582e-58 | -8.615850e-47 |
Msa0141660 | Msa0795820 | 0.803041 | 4.212586e-49 | -8.615850e-47 |
Msa0146770 | Msa0795820 | 0.837712 | 4.420948e-57 | -8.615850e-47 |
Msa0159170 | Msa0795820 | 0.836323 | 1.000694e-56 | -8.615850e-47 |
Msa0168230 | Msa0795820 | 0.810167 | 1.318514e-50 | -8.615850e-47 |
Msa0169280 | Msa0795820 | 0.824146 | 9.451985e-54 | -8.615850e-47 |
Msa0172970 | Msa0795820 | 0.812716 | 3.685651e-51 | -8.615850e-47 |
Msa0189300 | Msa0795820 | 0.835309 | 1.809297e-56 | -8.615850e-47 |
Msa0231660 | Msa0795820 | 0.848248 | 6.918690e-60 | -8.615850e-47 |
Msa0388700 | Msa0795820 | 0.815552 | 8.720692e-52 | -8.615850e-47 |
Msa0397540 | Msa0795820 | 0.814191 | 1.747360e-51 | -8.615850e-47 |
Msa0409090 | Msa0795820 | 0.808271 | 3.361737e-50 | -8.615850e-47 |
Msa0455540 | Msa0795820 | 0.800106 | 1.683879e-48 | -8.615850e-47 |
Msa0481030 | Msa0795820 | 0.805803 | 1.118971e-49 | -8.615850e-47 |
Msa0481280 | Msa0795820 | 0.806797 | 6.909346e-50 | -8.615850e-47 |
Msa0482130 | Msa0795820 | 0.871306 | 7.556812e-67 | -8.615850e-47 |
Msa0279240 | Msa0795820 | 0.824575 | 7.494001e-54 | -8.615850e-47 |
Msa0325590 | Msa0795820 | 0.802300 | 5.988994e-49 | -8.615850e-47 |
Msa0345390 | Msa0795820 | 0.803395 | 3.558655e-49 | -8.615850e-47 |
Msa0351990 | Msa0795820 | 0.815720 | 7.998598e-52 | -8.615850e-47 |
Msa0489410 | Msa0795820 | 0.821233 | 4.502446e-53 | -8.615850e-47 |
Msa0542090 | Msa0795820 | 0.867158 | 1.681345e-65 | -8.615850e-47 |
Msa0542130 | Msa0795820 | 0.870942 | 9.960726e-67 | -8.615850e-47 |
Msa0554290 | Msa0795820 | 0.837778 | 4.252567e-57 | -8.615850e-47 |
Msa0580470 | Msa0795820 | 0.845466 | 3.989663e-59 | -8.615850e-47 |
Msa0581280 | Msa0795820 | 0.833694 | 4.602402e-56 | -8.615850e-47 |
Msa0601150 | Msa0795820 | 0.823416 | 1.401944e-53 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0795820 | MtrunA17_Chr5g0399201 | 97.416 | 503 | 13 | 0 | 4 | 506 | 38 | 540 | 0.0 | 1024 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0795820 | AT2G35720.1 | 61.972 | 497 | 186 | 1 | 5 | 501 | 42 | 535 | 0.0 | 639 |
Msa0795820 | AT3G47940.1 | 60.000 | 50 | 17 | 2 | 5 | 53 | 31 | 78 | 2.81e-11 | 65.5 |
Find 169 sgRNAs with CRISPR-Local
Find 729 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTGTGAATGGCGAGGGTTTA+AGG | 0.122656 | 5_3:-7858210 | None:intergenic |
AGACAGGTTTATGATATTTA+TGG | 0.168325 | 5_3:+7858511 | Msa0795820:CDS |
GCCGGTTTACGTTCACTAAT+TGG | 0.209362 | 5_3:+7859938 | Msa0795820:CDS |
TCAATCTTCCGGGACGATTT+TGG | 0.212595 | 5_3:+7858654 | Msa0795820:CDS |
CATCTTTCATGAGAGGATTT+TGG | 0.213944 | 5_3:-7858426 | None:intergenic |
GCCCTGCAAATGATGAAATA+AGG | 0.217665 | 5_3:+7868313 | Msa0795820:three_prime_UTR |
TTAAACCGTATTACCTTAAA+AGG | 0.228193 | 5_3:+7864896 | Msa0795820:CDS |
GGCTGCATTGGAGGAAGATT+TGG | 0.245321 | 5_3:+7861079 | Msa0795820:CDS |
TGCAACCAATGAACAATAAA+AGG | 0.255425 | 5_3:-7868426 | None:intergenic |
AGAATTGGGAGAGGGTTATT+AGG | 0.265413 | 5_3:-7858247 | None:intergenic |
GTCCACTCTCTTCTCTTCCT+TGG | 0.268936 | 5_3:-7858124 | None:intergenic |
CCAGCGCACAGTACTGAATT+TGG | 0.281518 | 5_3:-7862449 | None:intergenic |
GATTTCTTCGTCGGAGGATT+CGG | 0.296432 | 5_3:-7858357 | None:intergenic |
TTTCATTTAAGGTTTGTTAT+TGG | 0.305907 | 5_3:+7868492 | Msa0795820:three_prime_UTR |
TGGGCAAGAATGAACTTATA+TGG | 0.332265 | 5_3:-7868458 | None:intergenic |
GAATTGGGAGAGGGTTATTA+GGG | 0.341623 | 5_3:-7858246 | None:intergenic |
TAAGTGCCTTGGCTGATAAA+AGG | 0.346620 | 5_3:-7868597 | None:intergenic |
TGTGAATGGCGAGGGTTTAA+GGG | 0.347573 | 5_3:-7858209 | None:intergenic |
GATGGTGACGGTCTCTTTAG+AGG | 0.353128 | 5_3:+7858703 | Msa0795820:CDS |
TTTATATCCTGTGGATGCCC+TGG | 0.364969 | 5_3:-7868117 | None:intergenic |
GATTGAAGGTAGTGGAGAAT+TGG | 0.365259 | 5_3:-7858262 | None:intergenic |
TTGAAATCTGGTTTGGAACT+TGG | 0.365381 | 5_3:+7858544 | Msa0795820:CDS |
AACAACTTGTATTCGTCAAA+TGG | 0.369969 | 5_3:+7866261 | Msa0795820:CDS |
GGTATGGAAGGATTGAAATC+TGG | 0.376748 | 5_3:+7858532 | Msa0795820:CDS |
TCATAAACCTGTCTCTTATT+CGG | 0.380932 | 5_3:-7858502 | None:intergenic |
TCCAATTAGTGAACGTAAAC+CGG | 0.384708 | 5_3:-7859939 | None:intergenic |
GGAAGGATTGAAATCTGGTT+TGG | 0.386145 | 5_3:+7858537 | Msa0795820:CDS |
TAATGATTCTGGTCAACTTA+AGG | 0.387282 | 5_3:+7866344 | Msa0795820:CDS |
TGGAGAGGTTGAAGAGAAGA+AGG | 0.387919 | 5_3:+7858605 | Msa0795820:CDS |
GCCCTTATTTCATCATTTGC+AGG | 0.390253 | 5_3:-7868315 | None:intergenic |
TACAACAAAATGTAGCTAAT+AGG | 0.392977 | 5_3:+7866166 | Msa0795820:CDS |
ATTTCTTCGTCGGAGGATTC+GGG | 0.394666 | 5_3:-7858356 | None:intergenic |
GCTGCATTGGAGGAAGATTT+GGG | 0.396220 | 5_3:+7861080 | Msa0795820:CDS |
TCCGCAAAGCTTATCGTCAA+TGG | 0.396259 | 5_3:+7858378 | Msa0795820:exon |
GTTGTATGTAGTAGGACTTC+AGG | 0.398493 | 5_3:+7862471 | Msa0795820:CDS |
CCCATTGACGATAAGCTTTG+CGG | 0.402719 | 5_3:-7858379 | None:intergenic |
TAAATGAAAATTACAGCCAT+TGG | 0.405863 | 5_3:-7868478 | None:intergenic |
TTATATCCTGTGGATGCCCT+GGG | 0.405887 | 5_3:-7868116 | None:intergenic |
CATTTGTTGTTTCTGACAGC+TGG | 0.407604 | 5_3:-7860155 | None:intergenic |
CACGAAGGTGTAAAGAAATC+AGG | 0.413837 | 5_3:+7867881 | Msa0795820:CDS |
TAATACCTTGTGTTGATTGC+CGG | 0.416603 | 5_3:-7867969 | None:intergenic |
ATTGAAGGTAGTGGAGAATT+GGG | 0.418502 | 5_3:-7858261 | None:intergenic |
CGAAATGTTGTTGGGATTGG+CGG | 0.418527 | 5_3:+7859818 | Msa0795820:CDS |
TGTAAAGAAATCAGGAATCA+TGG | 0.420936 | 5_3:+7867889 | Msa0795820:CDS |
AGGATTCGGGTGAGAGGTTG+AGG | 0.426031 | 5_3:-7858343 | None:intergenic |
CCCTGCAAATGATGAAATAA+GGG | 0.427287 | 5_3:+7868314 | Msa0795820:three_prime_UTR |
TTGAACCCTATGTTTGCTAC+TGG | 0.427445 | 5_3:+7864205 | Msa0795820:CDS |
TACAACAGTTTAGTTTCTCC+TGG | 0.432887 | 5_3:-7867929 | None:intergenic |
TGTCAAAACGAAATGTTGTT+GGG | 0.434109 | 5_3:+7859810 | Msa0795820:CDS |
AAAACATCCACAAGGTATCT+TGG | 0.434823 | 5_3:-7858146 | None:intergenic |
GTTGTTATGAAAGCGCTATA+TGG | 0.436734 | 5_3:+7866222 | Msa0795820:CDS |
AAATCTCATGGCTGCATTGG+AGG | 0.439365 | 5_3:+7861070 | Msa0795820:CDS |
CGTTGAATCTTTCTAATGCA+TGG | 0.443709 | 5_3:+7860127 | Msa0795820:CDS |
AAATGAAAATTACAGCCATT+GGG | 0.452490 | 5_3:-7868477 | None:intergenic |
TTGTCAAAACGAAATGTTGT+TGG | 0.453469 | 5_3:+7859809 | Msa0795820:CDS |
GCCTGAAAATTGTAGCTTGA+AGG | 0.454345 | 5_3:-7868244 | None:intergenic |
CAAAATTGTGGTACAGCAGC+AGG | 0.456849 | 5_3:-7868394 | None:intergenic |
GGCGGCAATTTAGCAGTTGA+AGG | 0.457018 | 5_3:+7859836 | Msa0795820:CDS |
AAGAAGGGAACATGAGAAGA+TGG | 0.457897 | 5_3:+7858621 | Msa0795820:CDS |
CTGGTTTGGAACTTGGTTCG+AGG | 0.462985 | 5_3:+7858551 | Msa0795820:CDS |
AAACGAAATGTTGTTGGGAT+TGG | 0.467280 | 5_3:+7859815 | Msa0795820:CDS |
AAGAATGAACTTATATGGTT+GGG | 0.469538 | 5_3:-7868453 | None:intergenic |
GGTTTATGATATTTATGGTA+TGG | 0.473781 | 5_3:+7858516 | Msa0795820:CDS |
AAGAAACAAGCAATTAGAAA+CGG | 0.479082 | 5_3:+7866191 | Msa0795820:CDS |
CAATCGCATCATCCCAATGA+TGG | 0.480172 | 5_3:+7858280 | Msa0795820:five_prime_UTR |
TCTAAATCTCATGGCTGCAT+TGG | 0.480181 | 5_3:+7861067 | Msa0795820:CDS |
AGAAACAAGCAATTAGAAAC+GGG | 0.485283 | 5_3:+7866192 | Msa0795820:CDS |
ACGGCACTCGATGTTATTAC+CGG | 0.487856 | 5_3:-7868545 | None:intergenic |
TTCAGATCCGAATAAGAGAC+AGG | 0.488853 | 5_3:+7858495 | Msa0795820:CDS |
CAAGAATGAACTTATATGGT+TGG | 0.490807 | 5_3:-7868454 | None:intergenic |
CCGCAAAGCTTATCGTCAAT+GGG | 0.491774 | 5_3:+7858379 | Msa0795820:exon |
TAATATTTCTTTATATCCTG+TGG | 0.491894 | 5_3:-7868126 | None:intergenic |
TATGATATTTATGGTATGGA+AGG | 0.492093 | 5_3:+7858520 | Msa0795820:CDS |
TTTCAGATACAACTCATGTT+GGG | 0.497567 | 5_3:+7860690 | Msa0795820:intron |
TGTTGTTTCTGACAGCTGGC+GGG | 0.500265 | 5_3:-7860151 | None:intergenic |
CATTGGGATGATGCGATTGA+AGG | 0.501590 | 5_3:-7858276 | None:intergenic |
TCTTCCATTGAGATGGAAGT+TGG | 0.502607 | 5_3:+7862409 | Msa0795820:CDS |
AGCTTTGCGGATTTCTTCGT+CGG | 0.502755 | 5_3:-7858366 | None:intergenic |
GGAAGAAAGAAGACGAGAAA+AGG | 0.504085 | 5_3:+7860739 | Msa0795820:CDS |
TTAACAATGTCTTTGAGAGA+TGG | 0.505493 | 5_3:+7860102 | Msa0795820:CDS |
CCCTTATTTCATCATTTGCA+GGG | 0.506393 | 5_3:-7868314 | None:intergenic |
TCTGTGCCGCAGTATTTAGA+TGG | 0.507210 | 5_3:+7858685 | Msa0795820:CDS |
GCAATTAGAAACGGGTGGAC+TGG | 0.509279 | 5_3:+7866200 | Msa0795820:CDS |
ACCACCAACTTCCATCTCAA+TGG | 0.513249 | 5_3:-7862413 | None:intergenic |
AGAACAAAGTAAAACGATGC+TGG | 0.514699 | 5_3:-7864241 | None:intergenic |
CAAGAAGTGACAATAACAAC+CGG | 0.521357 | 5_3:+7868526 | Msa0795820:three_prime_UTR |
TTTGGAACTTGGTTCGAGGT+TGG | 0.521456 | 5_3:+7858555 | Msa0795820:CDS |
GGAGAGGTTGAAGAGAAGAA+GGG | 0.521692 | 5_3:+7858606 | Msa0795820:CDS |
TGGAGATTTGAATTCTGTCG+TGG | 0.521929 | 5_3:+7863391 | Msa0795820:CDS |
TGTAAACAAGGCAAAACTGC+AGG | 0.526095 | 5_3:-7868174 | None:intergenic |
ATTTCAGATACAACTCATGT+TGG | 0.526912 | 5_3:+7860689 | Msa0795820:intron |
TCTTCTCTTCCTTGGAGAGT+AGG | 0.529264 | 5_3:-7858116 | None:intergenic |
CAACTCCTTTAGCTCGGCAC+AGG | 0.529594 | 5_3:+7861004 | Msa0795820:intron |
GGAGATTTGAATTCTGTCGT+GGG | 0.529795 | 5_3:+7863392 | Msa0795820:CDS |
AGATTAAAGCCGAGTTGGAG+AGG | 0.534621 | 5_3:+7858590 | Msa0795820:CDS |
GTAAAGAAATCAGGAATCAT+GGG | 0.535679 | 5_3:+7867890 | Msa0795820:CDS |
ACGACAGAATTCAAATCTCC+AGG | 0.537158 | 5_3:-7863389 | None:intergenic |
TCCATTGAGATGGAAGTTGG+TGG | 0.539674 | 5_3:+7862412 | Msa0795820:CDS |
ATAGAATTTATTGCTTCAGC+CGG | 0.541957 | 5_3:+7859920 | Msa0795820:CDS |
TCTCTTCAACCTCTCCAACT+CGG | 0.543108 | 5_3:-7858599 | None:intergenic |
TTGTTGTTTCTGACAGCTGG+CGG | 0.544720 | 5_3:-7860152 | None:intergenic |
CCAAATTCAGTACTGTGCGC+TGG | 0.546174 | 5_3:+7862449 | Msa0795820:CDS |
TGAAGAGATTAAAGCCGAGT+TGG | 0.546959 | 5_3:+7858585 | Msa0795820:CDS |
ATTAAGTCATCAACTTTCTG+AGG | 0.548247 | 5_3:+7859889 | Msa0795820:CDS |
TCACAACCATCTGTAGCTGT+AGG | 0.549045 | 5_3:+7860714 | Msa0795820:CDS |
CAGCTGTCAGAAACAACAAA+TGG | 0.555163 | 5_3:+7860156 | Msa0795820:CDS |
GTTGAAGGACATCAAGGTGG+TGG | 0.555707 | 5_3:+7859851 | Msa0795820:CDS |
TTGCCTTGTTTACATACTTG+AGG | 0.556004 | 5_3:+7868183 | Msa0795820:three_prime_UTR |
GACTGCCACTGCAGATGTGA+AGG | 0.563742 | 5_3:+7860761 | Msa0795820:CDS |
TCACACTCATCTGCAACAGC+AGG | 0.565108 | 5_3:+7860078 | Msa0795820:CDS |
GCAGAAGGCTCTAGAGAAGG+AGG | 0.565595 | 5_3:+7864924 | Msa0795820:CDS |
TTAGCAGTTGAAGGACATCA+AGG | 0.567675 | 5_3:+7859845 | Msa0795820:CDS |
AGGTAGTGGAGAATTGGGAG+AGG | 0.569247 | 5_3:-7858256 | None:intergenic |
ATAAGTTCATTCTTGCCCAA+TGG | 0.570627 | 5_3:+7868462 | Msa0795820:three_prime_UTR |
TTGTGCAGGTTCAAGAAGCA+AGG | 0.572071 | 5_3:+7866118 | Msa0795820:intron |
AGTTTAGTTTCTCCTGGACA+AGG | 0.572083 | 5_3:-7867923 | None:intergenic |
CACAACCATCTGTAGCTGTA+GGG | 0.573415 | 5_3:+7860715 | Msa0795820:CDS |
GGCGAGGGTTTAAGGGTGAA+AGG | 0.578504 | 5_3:-7858202 | None:intergenic |
TTCCACCCTACAGCTACAGA+TGG | 0.578527 | 5_3:-7860720 | None:intergenic |
ATGGTGACGGTCTCTTTAGA+GGG | 0.579960 | 5_3:+7858704 | Msa0795820:CDS |
AGATGGAAGTTGGTGGTGGA+AGG | 0.580738 | 5_3:+7862419 | Msa0795820:CDS |
CAGAGAAATTGTGAATGGCG+AGG | 0.582893 | 5_3:-7858218 | None:intergenic |
ATTGAGATGGAAGTTGGTGG+TGG | 0.583627 | 5_3:+7862415 | Msa0795820:CDS |
AGAGAAATTGTGAATGGCGA+GGG | 0.585703 | 5_3:-7858217 | None:intergenic |
TTTGCGGATTTCTTCGTCGG+AGG | 0.586012 | 5_3:-7858363 | None:intergenic |
GGTAGTGGAGAATTGGGAGA+GGG | 0.586490 | 5_3:-7858255 | None:intergenic |
CAACATTGTCCTACTCTCCA+AGG | 0.586546 | 5_3:+7858107 | Msa0795820:five_prime_UTR |
GTGCGCTGGTTGTATGTAGT+AGG | 0.589823 | 5_3:+7862463 | Msa0795820:CDS |
CATTTGCAGGGCGTAACAGA+AGG | 0.590996 | 5_3:-7868302 | None:intergenic |
CGTCGGAGGATTCGGGTGAG+AGG | 0.591705 | 5_3:-7858349 | None:intergenic |
GAGATTTGAATTCTGTCGTG+GGG | 0.593603 | 5_3:+7863393 | Msa0795820:CDS |
TATGTAGAGTACGCTCATGC+CGG | 0.594747 | 5_3:+7867950 | Msa0795820:CDS |
AACGCTCCAGTAGCAAACAT+AGG | 0.595428 | 5_3:-7864211 | None:intergenic |
CCGCAGTATTTAGATGGTGA+CGG | 0.596124 | 5_3:+7858691 | Msa0795820:CDS |
ACGCTCCAGTAGCAAACATA+GGG | 0.598281 | 5_3:-7864210 | None:intergenic |
GTGGCAGCATCTTTCATGAG+AGG | 0.598579 | 5_3:-7858433 | None:intergenic |
TGATACCCCAGGGCATCCAC+AGG | 0.599069 | 5_3:+7868110 | Msa0795820:CDS |
CAAATTAGCCAAAATCGTCC+CGG | 0.603920 | 5_3:-7858662 | None:intergenic |
AACCATCTGTAGCTGTAGGG+TGG | 0.613280 | 5_3:+7860718 | Msa0795820:CDS |
TAAGCAGAAGGCTCTAGAGA+AGG | 0.614702 | 5_3:+7864921 | Msa0795820:CDS |
CCTTAAAAGGAATAAGCAGA+AGG | 0.619877 | 5_3:+7864909 | Msa0795820:CDS |
TGAACAATTAGTGATACCCC+AGG | 0.624180 | 5_3:+7868099 | Msa0795820:CDS |
AGGAACATCACACAAAATTG+TGG | 0.626070 | 5_3:-7868406 | None:intergenic |
GATGATGCGATTGAAGGTAG+TGG | 0.628517 | 5_3:-7858270 | None:intergenic |
CTCCAAGGAAGAGAAGAGAG+TGG | 0.638400 | 5_3:+7858122 | Msa0795820:five_prime_UTR |
TGTGCAGGTTCAAGAAGCAA+GGG | 0.640879 | 5_3:+7866119 | Msa0795820:intron |
TTACCTCAAGTATGTAAACA+AGG | 0.641730 | 5_3:-7868186 | None:intergenic |
TACCGAGCTGATGTCTCGAA+AGG | 0.642389 | 5_3:-7861028 | None:intergenic |
TAATTGGAGTGCAGACATCA+CGG | 0.643892 | 5_3:+7859954 | Msa0795820:CDS |
AACAAGCAATTAGAAACGGG+TGG | 0.644799 | 5_3:+7866195 | Msa0795820:CDS |
GAGTGGACCAAGATACCTTG+TGG | 0.647070 | 5_3:+7858139 | Msa0795820:five_prime_UTR |
GTAAACAAGGCAAAACTGCA+GGG | 0.654050 | 5_3:-7868173 | None:intergenic |
AAGTACCTTCACATCTGCAG+TGG | 0.655070 | 5_3:-7860766 | None:intergenic |
ACTGTTAGATGGAATGCAAG+AGG | 0.659226 | 5_3:+7868219 | Msa0795820:three_prime_UTR |
CAGAAGGCTCTAGAGAAGGA+GGG | 0.666625 | 5_3:+7864925 | Msa0795820:CDS |
AAAATTGTGGTACAGCAGCA+GGG | 0.669364 | 5_3:-7868393 | None:intergenic |
TCATGCCGGCAATCAACACA+AGG | 0.679169 | 5_3:+7867964 | Msa0795820:CDS |
TATATCCTGTGGATGCCCTG+GGG | 0.680955 | 5_3:-7868115 | None:intergenic |
GTCCTTTCGAGACATCAGCT+CGG | 0.682396 | 5_3:+7861026 | Msa0795820:CDS |
TCCCAAACAAAACATCCACA+AGG | 0.691678 | 5_3:-7858154 | None:intergenic |
AAGGGAACATGAGAAGATGG+TGG | 0.692220 | 5_3:+7858624 | Msa0795820:CDS |
AGATTTGAATTCTGTCGTGG+GGG | 0.694309 | 5_3:+7863394 | Msa0795820:CDS |
TCATTAACTAGAAAATTCAG+AGG | 0.697331 | 5_3:-7866327 | None:intergenic |
GAACAATTAGTGATACCCCA+GGG | 0.697876 | 5_3:+7868100 | Msa0795820:CDS |
GCAGTTGAAGGACATCAAGG+TGG | 0.714956 | 5_3:+7859848 | Msa0795820:CDS |
TTGTTGATGCAGCTTCACGA+AGG | 0.717990 | 5_3:+7867866 | Msa0795820:intron |
AACTCGTTGAAAATTCTCAG+TGG | 0.720687 | 5_3:-7858452 | None:intergenic |
GCATTGGAGGAAGATTTGGG+AGG | 0.723138 | 5_3:+7861083 | Msa0795820:CDS |
CCGTCACCATCTAAATACTG+CGG | 0.736185 | 5_3:-7858691 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATATATATATATATATATA+TGG | + | chr5_3:7866484-7866503 | Msa0795820:intron | 0.0% |
!!! | TTTCTCTTAATAATTTTTAT+AGG | - | chr5_3:7859113-7859132 | None:intergenic | 10.0% |
!!! | AAACTTTTTATTTATAAAAG+TGG | - | chr5_3:7859604-7859623 | None:intergenic | 10.0% |
!! | GACAAATTAAAAATATAATA+TGG | - | chr5_3:7863168-7863187 | None:intergenic | 10.0% |
!! | CATGAATAAAAAATATTTAT+AGG | - | chr5_3:7864359-7864378 | None:intergenic | 10.0% |
!! | CAAATTAATTAAAAACTATA+TGG | + | chr5_3:7864455-7864474 | Msa0795820:intron | 10.0% |
!!! | TATTTTTTTTCATTCATTAT+AGG | - | chr5_3:7865148-7865167 | None:intergenic | 10.0% |
!! | TATATATATATATATAAGTC+AGG | + | chr5_3:7866548-7866567 | Msa0795820:intron | 10.0% |
!!! | TGATTTTTTTTTAATTACTT+TGG | - | chr5_3:7866905-7866924 | None:intergenic | 10.0% |
!!! | TTTTTTAAATAATTGAGGAA+GGG | - | chr5_3:7859628-7859647 | None:intergenic | 15.0% |
!!! | TTTTTTTAAATAATTGAGGA+AGG | - | chr5_3:7859629-7859648 | None:intergenic | 15.0% |
!!! | AAATTATATTTTAAGGAACT+TGG | - | chr5_3:7860542-7860561 | None:intergenic | 15.0% |
!!! | TACAACTTTTAATCAATATA+TGG | - | chr5_3:7860837-7860856 | None:intergenic | 15.0% |
!! | TTGATTAGAATTAAATTGAA+AGG | + | chr5_3:7861612-7861631 | Msa0795820:intron | 15.0% |
!! | TGATTAGAATTAAATTGAAA+GGG | + | chr5_3:7861613-7861632 | Msa0795820:intron | 15.0% |
!! | AAATTTGAAGATATTGATAA+AGG | + | chr5_3:7861803-7861822 | Msa0795820:intron | 15.0% |
!!! | TTTTAAATTAAACAAGAGTT+GGG | + | chr5_3:7862234-7862253 | Msa0795820:intron | 15.0% |
!!! | CTATCTAAAATAAAATTGTT+AGG | - | chr5_3:7863669-7863688 | None:intergenic | 15.0% |
!!! | CTAACAATTTTATTTTAGAT+AGG | + | chr5_3:7863667-7863686 | Msa0795820:intron | 15.0% |
!!! | TGCAATTATTTCTTTAATTT+TGG | - | chr5_3:7863723-7863742 | None:intergenic | 15.0% |
!! | CAAGTTTGATTATATTAAAA+TGG | + | chr5_3:7863746-7863765 | Msa0795820:intron | 15.0% |
!! | TCTAAATTAGCTAAATATTA+GGG | - | chr5_3:7864815-7864834 | None:intergenic | 15.0% |
!! | ATCTAAATTAGCTAAATATT+AGG | - | chr5_3:7864816-7864835 | None:intergenic | 15.0% |
!! | AATAAATAATGAAAAAGGAA+CGG | + | chr5_3:7865253-7865272 | Msa0795820:intron | 15.0% |
!!! | GGACATTTTATTTTATAATT+GGG | + | chr5_3:7865274-7865293 | Msa0795820:intron | 15.0% |
!! | GAAAGAAATATATAAACAAA+TGG | + | chr5_3:7865323-7865342 | Msa0795820:intron | 15.0% |
!!! | GTATGATTTATTAGTTTTAA+CGG | - | chr5_3:7866621-7866640 | None:intergenic | 15.0% |
!! | GTTAAAACTAATAAATCATA+CGG | + | chr5_3:7866620-7866639 | Msa0795820:intron | 15.0% |
!! | TCATTATAAAAATTGGATAT+TGG | + | chr5_3:7866643-7866662 | Msa0795820:intron | 15.0% |
!! | ATATATATATATATGGATCA+TGG | + | chr5_3:7867346-7867365 | Msa0795820:intron | 15.0% |
!!! | TTAAAATTGAAATTTTGAGA+TGG | + | chr5_3:7867413-7867432 | Msa0795820:intron | 15.0% |
!!! | CTAATTAAATTCTTTTAAAC+AGG | + | chr5_3:7868060-7868079 | Msa0795820:intron | 15.0% |
!! | TTAAAACCATTCTAACAAAA+AGG | - | chr5_3:7858971-7858990 | None:intergenic | 20.0% |
!!! | GTTTATCTTATAGTTTTTCT+AGG | - | chr5_3:7859212-7859231 | None:intergenic | 20.0% |
!!! | TTTTTATAGAAATATGTTCG+TGG | + | chr5_3:7859484-7859503 | Msa0795820:intron | 20.0% |
!!! | TTTTTAAATAATTGAGGAAG+GGG | - | chr5_3:7859627-7859646 | None:intergenic | 20.0% |
!! | AACATTCAAATAAAATCCTA+AGG | - | chr5_3:7859725-7859744 | None:intergenic | 20.0% |
!! | TTAGTATAGGAAAAGATAAA+AGG | - | chr5_3:7860975-7860994 | None:intergenic | 20.0% |
!!! | TACCTTCTTTTTTATCTTAA+TGG | + | chr5_3:7861292-7861311 | Msa0795820:intron | 20.0% |
!! | TACCATTAAGATAAAAAAGA+AGG | - | chr5_3:7861297-7861316 | None:intergenic | 20.0% |
!!! | ATTGCTGTAGATTTTTTTAA+AGG | + | chr5_3:7861336-7861355 | Msa0795820:intron | 20.0% |
!!! | AGATTTTTTTAAAGGTCAAT+AGG | + | chr5_3:7861344-7861363 | Msa0795820:intron | 20.0% |
!!! | GATTTTTTTAAAGGTCAATA+GGG | + | chr5_3:7861345-7861364 | Msa0795820:intron | 20.0% |
!! | AACTGCAAATATATAAAAGA+TGG | + | chr5_3:7861533-7861552 | Msa0795820:intron | 20.0% |
!!! | AAGATATTGATAAAGGTATT+AGG | + | chr5_3:7861810-7861829 | Msa0795820:intron | 20.0% |
!! | ATTAAACATGAAATTTAGAC+TGG | + | chr5_3:7862120-7862139 | Msa0795820:intron | 20.0% |
!! | CATTTCTAAATTCTAACTAT+TGG | - | chr5_3:7862151-7862170 | None:intergenic | 20.0% |
!! | TAGTTAGAATTTAGAAATGT+AGG | + | chr5_3:7862152-7862171 | Msa0795820:intron | 20.0% |
!! | AAAGATATATCATTTATCTC+TGG | - | chr5_3:7862217-7862236 | None:intergenic | 20.0% |
!!! | CTTTTAAATTAAACAAGAGT+TGG | + | chr5_3:7862233-7862252 | Msa0795820:intron | 20.0% |
!!! | ACTCATTGACATTAAATTTT+TGG | + | chr5_3:7862331-7862350 | Msa0795820:intron | 20.0% |
!! | AATCATCAAAAAGTTTATCT+GGG | + | chr5_3:7863073-7863092 | Msa0795820:intron | 20.0% |
!!! | TAAGAGCAAAAGTTATTTTT+TGG | - | chr5_3:7863117-7863136 | None:intergenic | 20.0% |
!! | ATATGGCTTAATTCAAAATT+TGG | - | chr5_3:7863151-7863170 | None:intergenic | 20.0% |
!!! | TTTTTAATTTGTCACATTGA+TGG | + | chr5_3:7863175-7863194 | Msa0795820:intron | 20.0% |
!! | TACAAGAAATCATTAACAAA+GGG | - | chr5_3:7863329-7863348 | None:intergenic | 20.0% |
!! | ATACAAGAAATCATTAACAA+AGG | - | chr5_3:7863330-7863349 | None:intergenic | 20.0% |
!!! | TTCAGATGTTTTATATATGA+TGG | + | chr5_3:7863504-7863523 | Msa0795820:intron | 20.0% |
!!! | AGTGTAGATTTTAACTTAAA+AGG | + | chr5_3:7863794-7863813 | Msa0795820:intron | 20.0% |
!!! | GTGTAGATTTTAACTTAAAA+GGG | + | chr5_3:7863795-7863814 | Msa0795820:intron | 20.0% |
!!! | TGTAGATTTTAACTTAAAAG+GGG | + | chr5_3:7863796-7863815 | Msa0795820:intron | 20.0% |
!!! | TTAGTATGTTTTACATAAGA+AGG | + | chr5_3:7863868-7863887 | Msa0795820:intron | 20.0% |
!!! | GTGTATATTTTAACAAAAGA+GGG | + | chr5_3:7863897-7863916 | Msa0795820:intron | 20.0% |
!!! | TGTATATTTTAACAAAAGAG+GGG | + | chr5_3:7863898-7863917 | Msa0795820:intron | 20.0% |
!!! | TATTTTTCAGCAATTACATT+AGG | - | chr5_3:7864058-7864077 | None:intergenic | 20.0% |
!!! | AGATATTTTGTGATAAAAAG+TGG | - | chr5_3:7864692-7864711 | None:intergenic | 20.0% |
!!! | TTTTTATCACAAAATATCTC+TGG | + | chr5_3:7864693-7864712 | Msa0795820:intron | 20.0% |
!!! | TTATTCCTTTTAAGGTAATA+CGG | - | chr5_3:7864904-7864923 | None:intergenic | 20.0% |
!! | TGATAACTACGTTAATAATT+TGG | + | chr5_3:7865087-7865106 | Msa0795820:intron | 20.0% |
!! | GATAACTACGTTAATAATTT+GGG | + | chr5_3:7865088-7865107 | Msa0795820:intron | 20.0% |
!!! | TTTTTTCATTCATTATAGGA+AGG | - | chr5_3:7865144-7865163 | None:intergenic | 20.0% |
!! | ATGAAAAAAAATACTGTATC+AGG | + | chr5_3:7865155-7865174 | Msa0795820:intron | 20.0% |
!!! | CGGACATTTTATTTTATAAT+TGG | + | chr5_3:7865273-7865292 | Msa0795820:intron | 20.0% |
!! | TTAAAAACCCTAAAAAACAT+AGG | - | chr5_3:7865496-7865515 | None:intergenic | 20.0% |
!!! | AATTTTCTAGTTAATGATTC+TGG | + | chr5_3:7866333-7866352 | Msa0795820:CDS | 20.0% |
!!! | GTTTAAAATATATCCACATA+AGG | - | chr5_3:7867206-7867225 | None:intergenic | 20.0% |
!!! | TACTTTTCTGTTTAATTTCT+TGG | + | chr5_3:7867467-7867486 | Msa0795820:intron | 20.0% |
!! | TGTTATGAAAAATATACAAG+TGG | - | chr5_3:7867696-7867715 | None:intergenic | 20.0% |
!!! | TTTTTACTGTTTAAGAAGTT+TGG | + | chr5_3:7868002-7868021 | Msa0795820:intron | 20.0% |
!!! | AAATTCTTTTAAACAGGTAT+TGG | + | chr5_3:7868066-7868085 | Msa0795820:intron | 20.0% |
!! | TAATATTTCTTTATATCCTG+TGG | - | chr5_3:7868129-7868148 | None:intergenic | 20.0% |
!!! | AATTATTTTGTACTGTTAGA+TGG | + | chr5_3:7868208-7868227 | Msa0795820:three_prime_UTR | 20.0% |
!!! | TTTCATTTAAGGTTTGTTAT+TGG | + | chr5_3:7868492-7868511 | Msa0795820:three_prime_UTR | 20.0% |
! | AGACAGGTTTATGATATTTA+TGG | + | chr5_3:7858511-7858530 | Msa0795820:CDS | 25.0% |
! | GGTTTATGATATTTATGGTA+TGG | + | chr5_3:7858516-7858535 | Msa0795820:CDS | 25.0% |
! | TATGATATTTATGGTATGGA+AGG | + | chr5_3:7858520-7858539 | Msa0795820:CDS | 25.0% |
! | TTAAGAGAAACTACTAAGAA+AGG | + | chr5_3:7859123-7859142 | Msa0795820:intron | 25.0% |
! | TTAATGAGTTGTAGATTAGA+CGG | + | chr5_3:7859154-7859173 | Msa0795820:intron | 25.0% |
! | TAAACTATTAAGAAAAGTCC+AGG | + | chr5_3:7859227-7859246 | Msa0795820:intron | 25.0% |
! | AAACTATTAAGAAAAGTCCA+GGG | + | chr5_3:7859228-7859247 | Msa0795820:intron | 25.0% |
! | TTGCAATAGTTTATCGATAT+TGG | + | chr5_3:7859381-7859400 | Msa0795820:intron | 25.0% |
! | AAAATTCAATCAAGAACACA+GGG | - | chr5_3:7859468-7859487 | None:intergenic | 25.0% |
! | AAAAATTCAATCAAGAACAC+AGG | - | chr5_3:7859469-7859488 | None:intergenic | 25.0% |
!! | CATTTTAAATTGTCTTAGGT+GGG | - | chr5_3:7859571-7859590 | None:intergenic | 25.0% |
!! | TGACCATTTTAAATTGTCTT+AGG | - | chr5_3:7859575-7859594 | None:intergenic | 25.0% |
! | TCAAATAAAATCCTAAGGAT+GGG | - | chr5_3:7859720-7859739 | None:intergenic | 25.0% |
! | TTCAAATAAAATCCTAAGGA+TGG | - | chr5_3:7859721-7859740 | None:intergenic | 25.0% |
! | AAATTGTACATAACTTTGTG+CGG | + | chr5_3:7860242-7860261 | Msa0795820:intron | 25.0% |
!! | GATCGATTTAATGATAACTA+TGG | + | chr5_3:7860290-7860309 | Msa0795820:intron | 25.0% |
! | TAAGCAACATACTAAATTCA+AGG | + | chr5_3:7860402-7860421 | Msa0795820:intron | 25.0% |
! | AAGCAACATACTAAATTCAA+GGG | + | chr5_3:7860403-7860422 | Msa0795820:intron | 25.0% |
!! | TGGTTTAGAATTTCTAAATG+TGG | + | chr5_3:7860449-7860468 | Msa0795820:intron | 25.0% |
!! | GGTTTAGAATTTCTAAATGT+GGG | + | chr5_3:7860450-7860469 | Msa0795820:intron | 25.0% |
!! | GTTTAGAATTTCTAAATGTG+GGG | + | chr5_3:7860451-7860470 | Msa0795820:intron | 25.0% |
!! | TTTAGAATTTCTAAATGTGG+GGG | + | chr5_3:7860452-7860471 | Msa0795820:intron | 25.0% |
!! | TAAGACCATTATTCTAAAGA+TGG | - | chr5_3:7860921-7860940 | None:intergenic | 25.0% |
! | GTTGAGAAAGAATTTAGTAT+AGG | - | chr5_3:7860988-7861007 | None:intergenic | 25.0% |
!! | AAAAAAGAAGGTATGAACAA+TGG | - | chr5_3:7861285-7861304 | None:intergenic | 25.0% |
!!! | ATTCCTAATCGATTTTCAAA+AGG | - | chr5_3:7861397-7861416 | None:intergenic | 25.0% |
!!! | TTTTGAAAATCGATTAGGAA+TGG | + | chr5_3:7861396-7861415 | Msa0795820:intron | 25.0% |
! | CTCTTATTATTCAATGTCAA+GGG | - | chr5_3:7861438-7861457 | None:intergenic | 25.0% |
! | CATAAAAACAAAAGAAACGA+TGG | - | chr5_3:7861488-7861507 | None:intergenic | 25.0% |
!!! | GTTTCTTTTGTTTTTATGCT+GGG | + | chr5_3:7861490-7861509 | Msa0795820:intron | 25.0% |
!!! | TTTCTTTTGTTTTTATGCTG+GGG | + | chr5_3:7861491-7861510 | Msa0795820:intron | 25.0% |
! | ATCTAAATTTCCCTCTTTAT+GGG | + | chr5_3:7861557-7861576 | Msa0795820:intron | 25.0% |
! | TTTATGGGAATCAAAATGAA+AGG | + | chr5_3:7861572-7861591 | Msa0795820:intron | 25.0% |
! | AGAATTAAATTGAAAGGGAA+AGG | + | chr5_3:7861618-7861637 | Msa0795820:intron | 25.0% |
!! | CATTGAACATTTTTCTATTG+AGG | + | chr5_3:7861691-7861710 | Msa0795820:intron | 25.0% |
! | TTGAAGTAAAATAGAGCATA+TGG | + | chr5_3:7861853-7861872 | Msa0795820:intron | 25.0% |
! | AAAAGTAAGATTGTGAATTG+AGG | + | chr5_3:7862000-7862019 | Msa0795820:intron | 25.0% |
!!! | GTTTGGGATATAAATTTTCT+TGG | - | chr5_3:7862181-7862200 | None:intergenic | 25.0% |
! | TAAACCGCTATAATTAATCA+CGG | - | chr5_3:7862555-7862574 | None:intergenic | 25.0% |
! | TTTCTAACACACTCTTTAAA+AGG | + | chr5_3:7862686-7862705 | Msa0795820:intron | 25.0% |
!! | TTCTAACACACTCTTTAAAA+GGG | + | chr5_3:7862687-7862706 | Msa0795820:intron | 25.0% |
!!! | CAGATAAACTTTTTGATGAT+TGG | - | chr5_3:7863074-7863093 | None:intergenic | 25.0% |
! | CAATCATCAAAAAGTTTATC+TGG | + | chr5_3:7863072-7863091 | Msa0795820:intron | 25.0% |
! | CTTAATTCAAAATTTGGATG+GGG | - | chr5_3:7863145-7863164 | None:intergenic | 25.0% |
! | GCTTAATTCAAAATTTGGAT+GGG | - | chr5_3:7863146-7863165 | None:intergenic | 25.0% |
! | AATCTTTAAATTTCCATAGG+TGG | - | chr5_3:7863218-7863237 | None:intergenic | 25.0% |
! | TGGAATCTTTAAATTTCCAT+AGG | - | chr5_3:7863221-7863240 | None:intergenic | 25.0% |
!! | ACCATTTATTTAACCTTTTC+AGG | + | chr5_3:7863360-7863379 | Msa0795820:intron | 25.0% |
!! | CCATTTATTTAACCTTTTCA+GGG | + | chr5_3:7863361-7863380 | Msa0795820:intron | 25.0% |
! | ATAAAAGTCAAATCCCAAAA+TGG | - | chr5_3:7863485-7863504 | None:intergenic | 25.0% |
! | TCATATCTCATTTGATCTAA+TGG | - | chr5_3:7863570-7863589 | None:intergenic | 25.0% |
!!! | GTTTTTCTTTTAATCGACTT+TGG | + | chr5_3:7863689-7863708 | Msa0795820:intron | 25.0% |
!! | ATGGACGTAAGATTTTATTA+AGG | + | chr5_3:7863765-7863784 | Msa0795820:intron | 25.0% |
!! | TGGACGTAAGATTTTATTAA+GGG | + | chr5_3:7863766-7863785 | Msa0795820:intron | 25.0% |
!!! | GGTGTATATTTTAACAAAAG+AGG | + | chr5_3:7863896-7863915 | Msa0795820:intron | 25.0% |
! | TGTAATTTAAGCAACTCTTA+GGG | + | chr5_3:7863928-7863947 | Msa0795820:intron | 25.0% |
! | AGAAAGGGAAATTTATTAAC+AGG | - | chr5_3:7864556-7864575 | None:intergenic | 25.0% |
! | GTACACTCAAAATTTAGAAA+GGG | - | chr5_3:7864571-7864590 | None:intergenic | 25.0% |
! | ATCAAGATTTCTGTAACTAA+TGG | - | chr5_3:7864667-7864686 | None:intergenic | 25.0% |
! | TTAAACCGTATTACCTTAAA+AGG | + | chr5_3:7864896-7864915 | Msa0795820:CDS | 25.0% |
! | AAAGATTAACACTTCCTAAA+TGG | + | chr5_3:7865349-7865368 | Msa0795820:intron | 25.0% |
!!! | ATAAACAGCCTATGTTTTTT+AGG | + | chr5_3:7865485-7865504 | Msa0795820:intron | 25.0% |
!!! | TAAACAGCCTATGTTTTTTA+GGG | + | chr5_3:7865486-7865505 | Msa0795820:intron | 25.0% |
!! | TTTTTACTAGAAACCCAAAT+GGG | - | chr5_3:7865519-7865538 | None:intergenic | 25.0% |
!!! | TTTTTTACTAGAAACCCAAA+TGG | - | chr5_3:7865520-7865539 | None:intergenic | 25.0% |
! | CTAGTAAAAAAGAAACATGT+TGG | + | chr5_3:7865529-7865548 | Msa0795820:intron | 25.0% |
!!! | TTTTTAGTTTTTTTCCGCTA+TGG | + | chr5_3:7865601-7865620 | Msa0795820:intron | 25.0% |
! | TACCTAGATATGAAATGAAA+GGG | - | chr5_3:7865780-7865799 | None:intergenic | 25.0% |
! | ATACCTAGATATGAAATGAA+AGG | - | chr5_3:7865781-7865800 | None:intergenic | 25.0% |
! | TACAACAAAATGTAGCTAAT+AGG | + | chr5_3:7866166-7866185 | Msa0795820:CDS | 25.0% |
! | AAGAAACAAGCAATTAGAAA+CGG | + | chr5_3:7866191-7866210 | Msa0795820:CDS | 25.0% |
! | TCATTAACTAGAAAATTCAG+AGG | - | chr5_3:7866330-7866349 | None:intergenic | 25.0% |
! | CATACGGTCATTATAAAAAT+TGG | + | chr5_3:7866636-7866655 | Msa0795820:intron | 25.0% |
! | AAAAATTGGATATTGGAACA+CGG | + | chr5_3:7866650-7866669 | Msa0795820:intron | 25.0% |
! | CAATGAATATTCATAAGTGA+TGG | - | chr5_3:7866782-7866801 | None:intergenic | 25.0% |
! | CATCACTTATGAATATTCAT+TGG | + | chr5_3:7866780-7866799 | Msa0795820:intron | 25.0% |
!!! | GAAAAATTTGTTGTCACATT+AGG | - | chr5_3:7866842-7866861 | None:intergenic | 25.0% |
!! | TGTGACAACAAATTTTTCTA+TGG | + | chr5_3:7866844-7866863 | Msa0795820:intron | 25.0% |
! | ATGATCGTAGAAAATTGTAT+GGG | + | chr5_3:7866960-7866979 | Msa0795820:intron | 25.0% |
! | ACACGATCGATTAAATTTAA+CGG | + | chr5_3:7867227-7867246 | Msa0795820:intron | 25.0% |
! | TAAATTTAACGGTTGAGATT+TGG | + | chr5_3:7867238-7867257 | Msa0795820:intron | 25.0% |
! | TATATATATGGATCATGGAA+TGG | + | chr5_3:7867351-7867370 | Msa0795820:intron | 25.0% |
! | AGTAACTGAAAGTTAAGTAT+AGG | + | chr5_3:7867440-7867459 | Msa0795820:intron | 25.0% |
! | GTAACTGAAAGTTAAGTATA+GGG | + | chr5_3:7867441-7867460 | Msa0795820:intron | 25.0% |
!!! | AGATTTATGTTCTAAAGATG+TGG | + | chr5_3:7867530-7867549 | Msa0795820:intron | 25.0% |
! | CCTCAGAAATATCATTAAAT+AGG | - | chr5_3:7867784-7867803 | None:intergenic | 25.0% |
!! | CCTATTTAATGATATTTCTG+AGG | + | chr5_3:7867781-7867800 | Msa0795820:intron | 25.0% |
!!! | ATTTTGGTGAAGTTACAATA+TGG | - | chr5_3:7867807-7867826 | None:intergenic | 25.0% |
!! | ACTTCACCAAAATTAAGTTT+TGG | + | chr5_3:7867814-7867833 | Msa0795820:intron | 25.0% |
!! | CTTCACCAAAATTAAGTTTT+GGG | + | chr5_3:7867815-7867834 | Msa0795820:intron | 25.0% |
! | AAAAAATTAAAGATACCCAC+TGG | - | chr5_3:7868269-7868288 | None:intergenic | 25.0% |
!! | ATGTTCCTTTTATTGTTCAT+TGG | + | chr5_3:7868421-7868440 | Msa0795820:three_prime_UTR | 25.0% |
! | AAGAATGAACTTATATGGTT+GGG | - | chr5_3:7868456-7868475 | None:intergenic | 25.0% |
! | AAATGAAAATTACAGCCATT+GGG | - | chr5_3:7868480-7868499 | None:intergenic | 25.0% |
! | TAAATGAAAATTACAGCCAT+TGG | - | chr5_3:7868481-7868500 | None:intergenic | 25.0% |
!! | ATGGCTGTAATTTTCATTTA+AGG | + | chr5_3:7868481-7868500 | Msa0795820:three_prime_UTR | 25.0% |
! | TTTTGCAGAGAAATTGTGAA+TGG | - | chr5_3:7858226-7858245 | None:intergenic | 30.0% |
TCATAAACCTGTCTCTTATT+CGG | - | chr5_3:7858505-7858524 | None:intergenic | 30.0% | |
GATAAGCTAGTGTATTGAAA+TGG | + | chr5_3:7858853-7858872 | Msa0795820:intron | 30.0% | |
! | TGCATACCTTTTTGTTAGAA+TGG | + | chr5_3:7858962-7858981 | Msa0795820:intron | 30.0% |
GATAGTAATCAAATCACTAG+AGG | + | chr5_3:7859176-7859195 | Msa0795820:intron | 30.0% | |
ATGGATATGATAGAACATTG+CGG | + | chr5_3:7859266-7859285 | Msa0795820:intron | 30.0% | |
ATCGATAAACTATTGCAACA+AGG | - | chr5_3:7859379-7859398 | None:intergenic | 30.0% | |
! | CCATTTTAAATTGTCTTAGG+TGG | - | chr5_3:7859572-7859591 | None:intergenic | 30.0% |
CCACCTAAGACAATTTAAAA+TGG | + | chr5_3:7859569-7859588 | Msa0795820:intron | 30.0% | |
GAAGCAATTATTTAACTGTC+AGG | - | chr5_3:7859667-7859686 | None:intergenic | 30.0% | |
TTGTCAAAACGAAATGTTGT+TGG | + | chr5_3:7859809-7859828 | Msa0795820:CDS | 30.0% | |
TGTCAAAACGAAATGTTGTT+GGG | + | chr5_3:7859810-7859829 | Msa0795820:CDS | 30.0% | |
ATTAAGTCATCAACTTTCTG+AGG | + | chr5_3:7859889-7859908 | Msa0795820:CDS | 30.0% | |
ATAGAATTTATTGCTTCAGC+CGG | + | chr5_3:7859920-7859939 | Msa0795820:CDS | 30.0% | |
GAAACACATAAATCATCACT+AGG | - | chr5_3:7860030-7860049 | None:intergenic | 30.0% | |
! | TTAACAATGTCTTTGAGAGA+TGG | + | chr5_3:7860102-7860121 | Msa0795820:CDS | 30.0% |
TTGCTTATACAAAGTAATCC+TGG | - | chr5_3:7860389-7860408 | None:intergenic | 30.0% | |
TACTAAATTCAAGGGAACAA+AGG | + | chr5_3:7860411-7860430 | Msa0795820:intron | 30.0% | |
GTCAACAAAGTTTGTATGTT+TGG | + | chr5_3:7860504-7860523 | Msa0795820:intron | 30.0% | |
! | CTGGCGCAAATTATATTTTA+AGG | - | chr5_3:7860549-7860568 | None:intergenic | 30.0% |
! | AATATAATTTGCGCCAGAAT+TGG | + | chr5_3:7860552-7860571 | Msa0795820:intron | 30.0% |
ATTTCAGATACAACTCATGT+TGG | + | chr5_3:7860689-7860708 | Msa0795820:intron | 30.0% | |
TTTCAGATACAACTCATGTT+GGG | + | chr5_3:7860690-7860709 | Msa0795820:intron | 30.0% | |
ATATATGGTCGTAAAATGTC+CGG | - | chr5_3:7860822-7860841 | None:intergenic | 30.0% | |
!! | TGCTTCCATCTTTAGAATAA+TGG | + | chr5_3:7860913-7860932 | Msa0795820:intron | 30.0% |
! | CGATTTTCTTCTAAATCTCA+TGG | + | chr5_3:7861058-7861077 | Msa0795820:CDS | 30.0% |
GGAAACAGAGTAAAATTAGT+TGG | - | chr5_3:7861264-7861283 | None:intergenic | 30.0% | |
CCTCTTATTATTCAATGTCA+AGG | - | chr5_3:7861439-7861458 | None:intergenic | 30.0% | |
CCTTGACATTGAATAATAAG+AGG | + | chr5_3:7861436-7861455 | Msa0795820:intron | 30.0% | |
!!! | CGTTTCTTTTGTTTTTATGC+TGG | + | chr5_3:7861489-7861508 | Msa0795820:intron | 30.0% |
CATCTAAATTTCCCTCTTTA+TGG | + | chr5_3:7861556-7861575 | Msa0795820:intron | 30.0% | |
!!! | CATTTTGATTCCCATAAAGA+GGG | - | chr5_3:7861570-7861589 | None:intergenic | 30.0% |
!!! | TCATTTTGATTCCCATAAAG+AGG | - | chr5_3:7861571-7861590 | None:intergenic | 30.0% |
CATTCAGCATATATAAGAGA+TGG | + | chr5_3:7861719-7861738 | Msa0795820:intron | 30.0% | |
! | ATATATAAGAGATGGTGTCA+TGG | + | chr5_3:7861727-7861746 | Msa0795820:intron | 30.0% |
!!! | TAACATTTTAAAACGCCTTG+TGG | - | chr5_3:7861940-7861959 | None:intergenic | 30.0% |
! | TTAAATACTTGATAGCCTGT+AGG | + | chr5_3:7862278-7862297 | Msa0795820:intron | 30.0% |
AAAGACAAGAACGATAAACA+TGG | - | chr5_3:7862528-7862547 | None:intergenic | 30.0% | |
GTTTCCGTGATTAATTATAG+CGG | + | chr5_3:7862548-7862567 | Msa0795820:intron | 30.0% | |
GTGATTAATTATAGCGGTTT+AGG | + | chr5_3:7862554-7862573 | Msa0795820:intron | 30.0% | |
!!! | TTACCCTGTTTTTTACACAT+GGG | + | chr5_3:7862786-7862805 | Msa0795820:intron | 30.0% |
! | TCAAAGAGTGTGTTAGAAAA+GGG | - | chr5_3:7862871-7862890 | None:intergenic | 30.0% |
! | ATCAAAGAGTGTGTTAGAAA+AGG | - | chr5_3:7862872-7862891 | None:intergenic | 30.0% |
TTTCTAACACACTCTTTGAT+TGG | + | chr5_3:7862872-7862891 | Msa0795820:intron | 30.0% | |
TAGGTCCCACAATATTTATA+CGG | - | chr5_3:7862935-7862954 | None:intergenic | 30.0% | |
!!! | AACTGCATAGTATTTTAGCA+GGG | - | chr5_3:7863036-7863055 | None:intergenic | 30.0% |
!!! | AAACTGCATAGTATTTTAGC+AGG | - | chr5_3:7863037-7863056 | None:intergenic | 30.0% |
GGCTTAATTCAAAATTTGGA+TGG | - | chr5_3:7863147-7863166 | None:intergenic | 30.0% | |
CCCTGAAAAGGTTAAATAAA+TGG | - | chr5_3:7863364-7863383 | None:intergenic | 30.0% | |
ATCTCATTTGATCTAATGGT+GGG | - | chr5_3:7863566-7863585 | None:intergenic | 30.0% | |
TATCTCATTTGATCTAATGG+TGG | - | chr5_3:7863567-7863586 | None:intergenic | 30.0% | |
TCTCACATACACAAGTAAAA+TGG | - | chr5_3:7863642-7863661 | None:intergenic | 30.0% | |
! | CGTAAGATTTTATTAAGGGA+TGG | + | chr5_3:7863770-7863789 | Msa0795820:intron | 30.0% |
!!! | AGATTTTAACTTAAAAGGGG+AGG | + | chr5_3:7863799-7863818 | Msa0795820:intron | 30.0% |
!!! | GATTTTAACTTAAAAGGGGA+GGG | + | chr5_3:7863800-7863819 | Msa0795820:intron | 30.0% |
!!! | ATTTTAACTTAAAAGGGGAG+GGG | + | chr5_3:7863801-7863820 | Msa0795820:intron | 30.0% |
ATGTAATTCAAACTTCTCTC+AGG | + | chr5_3:7863825-7863844 | Msa0795820:intron | 30.0% | |
TGTAATTCAAACTTCTCTCA+GGG | + | chr5_3:7863826-7863845 | Msa0795820:intron | 30.0% | |
! | TGTTTTACATAAGAAGGAAG+AGG | + | chr5_3:7863874-7863893 | Msa0795820:intron | 30.0% |
! | GTTTTACATAAGAAGGAAGA+GGG | + | chr5_3:7863875-7863894 | Msa0795820:intron | 30.0% |
!!! | ATATTTTAACAAAAGAGGGG+AGG | + | chr5_3:7863901-7863920 | Msa0795820:intron | 30.0% |
!!! | TATTTTAACAAAAGAGGGGA+GGG | + | chr5_3:7863902-7863921 | Msa0795820:intron | 30.0% |
GTGTAATTTAAGCAACTCTT+AGG | + | chr5_3:7863927-7863946 | Msa0795820:intron | 30.0% | |
AGCAATTACATTAGGTTTCA+AGG | - | chr5_3:7864050-7864069 | None:intergenic | 30.0% | |
! | ATCGTTTTACTTTGTTCTGA+AGG | + | chr5_3:7864246-7864265 | Msa0795820:CDS | 30.0% |
!! | TAGCACTGACAATACTTAAA+CGG | - | chr5_3:7864313-7864332 | None:intergenic | 30.0% |
TGCTGAATAATGATGACTTA+CGG | - | chr5_3:7864398-7864417 | None:intergenic | 30.0% | |
TAAGTCATCATTATTCAGCA+GGG | + | chr5_3:7864398-7864417 | Msa0795820:intron | 30.0% | |
GGGAAATTTATTAACAGGTA+TGG | - | chr5_3:7864551-7864570 | None:intergenic | 30.0% | |
GGTACACTCAAAATTTAGAA+AGG | - | chr5_3:7864572-7864591 | None:intergenic | 30.0% | |
AGTTATCTTGATTCTTCGTA+TGG | - | chr5_3:7864729-7864748 | None:intergenic | 30.0% | |
! | GTTTGATTTATTGAACAGCT+TGG | + | chr5_3:7864781-7864800 | Msa0795820:intron | 30.0% |
AAAAACTTCTACTCAGGTAT+GGG | + | chr5_3:7864948-7864967 | Msa0795820:intron | 30.0% | |
TTATGGTATTAACTGAGTAG+TGG | + | chr5_3:7864977-7864996 | Msa0795820:intron | 30.0% | |
! | GTAAGATGGTCTATATTTTC+TGG | + | chr5_3:7865059-7865078 | Msa0795820:intron | 30.0% |
!! | TTTAGGGTTTTTAACCCATT+TGG | + | chr5_3:7865502-7865521 | Msa0795820:intron | 30.0% |
! | TTAGGGTTTTTAACCCATTT+GGG | + | chr5_3:7865503-7865522 | Msa0795820:intron | 30.0% |
AAACAGAGAAAACTGAGATT+GGG | - | chr5_3:7865580-7865599 | None:intergenic | 30.0% | |
AAAACAGAGAAAACTGAGAT+TGG | - | chr5_3:7865581-7865600 | None:intergenic | 30.0% | |
AAAATCTTACTGTCCAACTA+TGG | - | chr5_3:7865674-7865693 | None:intergenic | 30.0% | |
TAAAGATTCACCATCCAAAT+AGG | - | chr5_3:7865721-7865740 | None:intergenic | 30.0% | |
ACCTAGATATGAAATGAAAG+GGG | - | chr5_3:7865779-7865798 | None:intergenic | 30.0% | |
! | GACATGTAACTTCTAAAAAG+TGG | - | chr5_3:7866019-7866038 | None:intergenic | 30.0% |
! | AGACATATCAGATCTGTTTT+TGG | + | chr5_3:7866048-7866067 | Msa0795820:intron | 30.0% |
AGAAACAAGCAATTAGAAAC+GGG | + | chr5_3:7866192-7866211 | Msa0795820:CDS | 30.0% | |
AACAACTTGTATTCGTCAAA+TGG | + | chr5_3:7866261-7866280 | Msa0795820:CDS | 30.0% | |
!!! | ACAAGTTTTGAATCTACTTC+AGG | + | chr5_3:7866285-7866304 | Msa0795820:CDS | 30.0% |
TAATGATTCTGGTCAACTTA+AGG | + | chr5_3:7866344-7866363 | Msa0795820:CDS | 30.0% | |
!! | TAACTTTTTGAGAGAAAGCA+AGG | - | chr5_3:7866377-7866396 | None:intergenic | 30.0% |
!!! | TAGTTTTAACGGTTGAGATT+TGG | - | chr5_3:7866610-7866629 | None:intergenic | 30.0% |
ATCGATGACTAAGAACATTT+AGG | - | chr5_3:7866813-7866832 | None:intergenic | 30.0% | |
!! | AAATTTGTTGTCACATTAGG+AGG | - | chr5_3:7866839-7866858 | None:intergenic | 30.0% |
ATGAAAAGAAACGCTAAAAG+GGG | - | chr5_3:7866942-7866961 | None:intergenic | 30.0% | |
CATGAAAAGAAACGCTAAAA+GGG | - | chr5_3:7866943-7866962 | None:intergenic | 30.0% | |
TCATGAAAAGAAACGCTAAA+AGG | - | chr5_3:7866944-7866963 | None:intergenic | 30.0% | |
CATGATCGTAGAAAATTGTA+TGG | + | chr5_3:7866959-7866978 | Msa0795820:intron | 30.0% | |
GTTAAATTTAATCGATCGTG+TGG | - | chr5_3:7867228-7867247 | None:intergenic | 30.0% | |
TTGGACTGACATTAAATTTC+TGG | + | chr5_3:7867486-7867505 | Msa0795820:intron | 30.0% | |
TCTCTTTGACGTAAAACTTA+AGG | - | chr5_3:7867513-7867532 | None:intergenic | 30.0% | |
CAGAGTTGAGTTTAATGAAT+TGG | - | chr5_3:7867596-7867615 | None:intergenic | 30.0% | |
GATGCAAAAACTTACTTGAA+AGG | + | chr5_3:7867662-7867681 | Msa0795820:intron | 30.0% | |
CTACTACTTGTGTGAATTAA+AGG | + | chr5_3:7867728-7867747 | Msa0795820:intron | 30.0% | |
AACAGAACTTCCATTATTTC+AGG | - | chr5_3:7867847-7867866 | None:intergenic | 30.0% | |
TGTAAAGAAATCAGGAATCA+TGG | + | chr5_3:7867889-7867908 | Msa0795820:CDS | 30.0% | |
GTAAAGAAATCAGGAATCAT+GGG | + | chr5_3:7867890-7867909 | Msa0795820:CDS | 30.0% | |
!!! | TCTTTTAAACAGGTATTGGT+TGG | + | chr5_3:7868070-7868089 | Msa0795820:intron | 30.0% |
TTACCTCAAGTATGTAAACA+AGG | - | chr5_3:7868189-7868208 | None:intergenic | 30.0% | |
TGCAACCAATGAACAATAAA+AGG | - | chr5_3:7868429-7868448 | None:intergenic | 30.0% | |
CAAGAATGAACTTATATGGT+TGG | - | chr5_3:7868457-7868476 | None:intergenic | 30.0% | |
GAACTGATACAAAAATGTCA+CGG | - | chr5_3:7868567-7868586 | None:intergenic | 30.0% | |
! | AAAACATCCACAAGGTATCT+TGG | - | chr5_3:7858149-7858168 | None:intergenic | 35.0% |
!! | TACCTTGTGGATGTTTTGTT+TGG | + | chr5_3:7858152-7858171 | Msa0795820:five_prime_UTR | 35.0% |
!!! | ACCTTGTGGATGTTTTGTTT+GGG | + | chr5_3:7858153-7858172 | Msa0795820:five_prime_UTR | 35.0% |
!! | ATTGAAGGTAGTGGAGAATT+GGG | - | chr5_3:7858264-7858283 | None:intergenic | 35.0% |
!!! | CAGAGTTTTGTTCCATCATT+GGG | - | chr5_3:7858295-7858314 | None:intergenic | 35.0% |
!!! | TCAGAGTTTTGTTCCATCAT+TGG | - | chr5_3:7858296-7858315 | None:intergenic | 35.0% |
! | CATCTTTCATGAGAGGATTT+TGG | - | chr5_3:7858429-7858448 | None:intergenic | 35.0% |
AACTCGTTGAAAATTCTCAG+TGG | - | chr5_3:7858455-7858474 | None:intergenic | 35.0% | |
!! | TTGAAATCTGGTTTGGAACT+TGG | + | chr5_3:7858544-7858563 | Msa0795820:CDS | 35.0% |
TCAGTTCGCTTATCAACTAT+CGG | - | chr5_3:7858781-7858800 | None:intergenic | 35.0% | |
! | TTGATAAGCTAGCTTGTAGT+TGG | + | chr5_3:7858825-7858844 | Msa0795820:intron | 35.0% |
TGTATTGAAATGGCAGTGTT+TGG | + | chr5_3:7858863-7858882 | Msa0795820:intron | 35.0% | |
GATAGTGAATGAGCTTATAG+CGG | + | chr5_3:7859032-7859051 | Msa0795820:intron | 35.0% | |
ATATCCAGTTCATTAATCCC+TGG | - | chr5_3:7859248-7859267 | None:intergenic | 35.0% | |
AGGGATTAATGAACTGGATA+TGG | + | chr5_3:7859247-7859266 | Msa0795820:intron | 35.0% | |
! | AAGCTTTATCCCATTAAGTG+GGG | - | chr5_3:7859315-7859334 | None:intergenic | 35.0% |
! | CAAGCTTTATCCCATTAAGT+GGG | - | chr5_3:7859316-7859335 | None:intergenic | 35.0% |
! | TCAAGCTTTATCCCATTAAG+TGG | - | chr5_3:7859317-7859336 | None:intergenic | 35.0% |
AGTGTTAATGTACGCAATGA+TGG | + | chr5_3:7859410-7859429 | Msa0795820:intron | 35.0% | |
AAACGAAATGTTGTTGGGAT+TGG | + | chr5_3:7859815-7859834 | Msa0795820:CDS | 35.0% | |
TCCAATTAGTGAACGTAAAC+CGG | - | chr5_3:7859942-7859961 | None:intergenic | 35.0% | |
CGTTGAATCTTTCTAATGCA+TGG | + | chr5_3:7860127-7860146 | Msa0795820:CDS | 35.0% | |
AGATGAGAAAGAAAAGTCCA+AGG | - | chr5_3:7860201-7860220 | None:intergenic | 35.0% | |
AAAATAATGTCCACTGCATC+TGG | + | chr5_3:7860348-7860367 | Msa0795820:intron | 35.0% | |
!! | ACAAAGTAATCCTGGTTTTC+TGG | - | chr5_3:7860381-7860400 | None:intergenic | 35.0% |
ACACTCATCTATTACAAGGT+CGG | - | chr5_3:7860486-7860505 | None:intergenic | 35.0% | |
GTTGACACTCATCTATTACA+AGG | - | chr5_3:7860490-7860509 | None:intergenic | 35.0% | |
ACACTTATATGAGCCAATTC+TGG | - | chr5_3:7860568-7860587 | None:intergenic | 35.0% | |
! | GAATTGGCTCATATAAGTGT+TGG | + | chr5_3:7860568-7860587 | Msa0795820:intron | 35.0% |
! | AACTCACCAATGCTTTGAAT+TGG | - | chr5_3:7860594-7860613 | None:intergenic | 35.0% |
!! | ATTCAAAGCATTGGTGAGTT+TGG | + | chr5_3:7860594-7860613 | Msa0795820:intron | 35.0% |
AATCTGTTTCATAATCCCTG+AGG | - | chr5_3:7860630-7860649 | None:intergenic | 35.0% | |
CAGGGATTATGAAACAGATT+TGG | + | chr5_3:7860630-7860649 | Msa0795820:intron | 35.0% | |
GCAAAATCAGTCATTTGTAC+CGG | + | chr5_3:7860800-7860819 | Msa0795820:intron | 35.0% | |
AAAATCTAAGTACGACGGTA+TGG | - | chr5_3:7861142-7861161 | None:intergenic | 35.0% | |
! | ATACCGTCGTACTTAGATTT+TGG | + | chr5_3:7861141-7861160 | Msa0795820:intron | 35.0% |
TCACCAAAATCTAAGTACGA+CGG | - | chr5_3:7861147-7861166 | None:intergenic | 35.0% | |
TTGCAATGTCACTGTATTGT+TGG | + | chr5_3:7861175-7861194 | Msa0795820:intron | 35.0% | |
!! | CCTAATCGATTTTCAAAAGG+AGG | - | chr5_3:7861394-7861413 | None:intergenic | 35.0% |
!! | CCTCCTTTTGAAAATCGATT+AGG | + | chr5_3:7861391-7861410 | Msa0795820:intron | 35.0% |
ACAAAAGAAACGATGGTGTA+TGG | - | chr5_3:7861481-7861500 | None:intergenic | 35.0% | |
AGAGAGAAATTTCAGTGTAG+AGG | + | chr5_3:7861891-7861910 | Msa0795820:intron | 35.0% | |
AGATGATACAGTCTCATCTT+AGG | + | chr5_3:7862041-7862060 | Msa0795820:intron | 35.0% | |
ACATGAAATTTAGACTGGAC+AGG | + | chr5_3:7862125-7862144 | Msa0795820:intron | 35.0% | |
!! | TGGATCTCTCTTTAAGGTTT+GGG | - | chr5_3:7862197-7862216 | None:intergenic | 35.0% |
TATCTCTGGATCTCTCTTTA+AGG | - | chr5_3:7862203-7862222 | None:intergenic | 35.0% | |
GGAAGAGCTAAAAGTTCAAA+TGG | - | chr5_3:7862395-7862414 | None:intergenic | 35.0% | |
!!! | TTTTAGCTCTTCCATTGAGA+TGG | + | chr5_3:7862402-7862421 | Msa0795820:intron | 35.0% |
AATTATAGCGGTTTAGGCTT+AGG | + | chr5_3:7862560-7862579 | Msa0795820:intron | 35.0% | |
ATTATAGCGGTTTAGGCTTA+GGG | + | chr5_3:7862561-7862580 | Msa0795820:intron | 35.0% | |
CATGTGTAAAAAACAGGGTA+AGG | - | chr5_3:7862787-7862806 | None:intergenic | 35.0% | |
!!! | CTTACCCTGTTTTTTACACA+TGG | + | chr5_3:7862785-7862804 | Msa0795820:intron | 35.0% |
!!! | TACCCTGTTTTTTACACATG+GGG | + | chr5_3:7862787-7862806 | Msa0795820:intron | 35.0% |
! | AAAGAGTGTGTTAGAAAAGG+GGG | - | chr5_3:7862869-7862888 | None:intergenic | 35.0% |
! | CAAAGAGTGTGTTAGAAAAG+GGG | - | chr5_3:7862870-7862889 | None:intergenic | 35.0% |
TTGTTTCCACTGAATCATGT+TGG | + | chr5_3:7862907-7862926 | Msa0795820:intron | 35.0% | |
TTGGACCCGTATAAATATTG+TGG | + | chr5_3:7862926-7862945 | Msa0795820:intron | 35.0% | |
TGGACCCGTATAAATATTGT+GGG | + | chr5_3:7862927-7862946 | Msa0795820:intron | 35.0% | |
AGGTCCCACAATATTTATAC+GGG | - | chr5_3:7862934-7862953 | None:intergenic | 35.0% | |
TCTTTAGTATGGTGAGGAAA+AGG | - | chr5_3:7862976-7862995 | None:intergenic | 35.0% | |
! | CAAAAAGTTTATCTGGGATG+TGG | + | chr5_3:7863079-7863098 | Msa0795820:intron | 35.0% |
AAATTTCCATAGGTGGAAAC+TGG | - | chr5_3:7863211-7863230 | None:intergenic | 35.0% | |
GTAAAGAAGACTCTTCTTAC+AGG | - | chr5_3:7863436-7863455 | None:intergenic | 35.0% | |
! | ATAGATGCTAGACACCATTT+TGG | + | chr5_3:7863468-7863487 | Msa0795820:intron | 35.0% |
! | TAGATGCTAGACACCATTTT+GGG | + | chr5_3:7863469-7863488 | Msa0795820:intron | 35.0% |
!! | GATATGACTTGTTGATCCAA+TGG | + | chr5_3:7863588-7863607 | Msa0795820:intron | 35.0% |
!!! | TTTTAACTTAAAAGGGGAGG+GGG | + | chr5_3:7863802-7863821 | Msa0795820:intron | 35.0% |
GTAATTCAAACTTCTCTCAG+GGG | + | chr5_3:7863827-7863846 | Msa0795820:intron | 35.0% | |
TTCACAAAGGAAGCTAAACA+GGG | - | chr5_3:7864010-7864029 | None:intergenic | 35.0% | |
TTAGCTTCCTTTGTGAACTT+CGG | + | chr5_3:7864013-7864032 | Msa0795820:intron | 35.0% | |
AGAACAAAGTAAAACGATGC+TGG | - | chr5_3:7864244-7864263 | None:intergenic | 35.0% | |
ACTTAAACGGTTCAACAAGT+AGG | - | chr5_3:7864300-7864319 | None:intergenic | 35.0% | |
! | TAAGTATTGTCAGTGCTATC+TGG | + | chr5_3:7864315-7864334 | Msa0795820:intron | 35.0% |
GTAAGTCATCATTATTCAGC+AGG | + | chr5_3:7864397-7864416 | Msa0795820:intron | 35.0% | |
! | TTATTCAGCAGGGTGAATTT+TGG | + | chr5_3:7864408-7864427 | Msa0795820:intron | 35.0% |
!!! | TGCGTGTTATTTTGTTCCAA+TGG | - | chr5_3:7864497-7864516 | None:intergenic | 35.0% |
!!! | TGTACCTTTTCTAGTTCACA+AGG | + | chr5_3:7864586-7864605 | Msa0795820:intron | 35.0% |
ACAACCTTGTGAACTAGAAA+AGG | - | chr5_3:7864593-7864612 | None:intergenic | 35.0% | |
! | CCTTCTGCTTATTCCTTTTA+AGG | - | chr5_3:7864912-7864931 | None:intergenic | 35.0% |
CCTTAAAAGGAATAAGCAGA+AGG | + | chr5_3:7864909-7864928 | Msa0795820:CDS | 35.0% | |
GAAAAACTTCTACTCAGGTA+TGG | + | chr5_3:7864947-7864966 | Msa0795820:intron | 35.0% | |
! | TCAGGTATGGGTGATTTTTA+TGG | + | chr5_3:7864960-7864979 | Msa0795820:intron | 35.0% |
ATTAACTGAGTAGTGGTGTT+AGG | + | chr5_3:7864984-7865003 | Msa0795820:intron | 35.0% | |
!! | TACTTGTGTGTTGTTGTTTC+TGG | + | chr5_3:7865013-7865032 | Msa0795820:intron | 35.0% |
TGTACTCTTCTCATGTAAGA+TGG | + | chr5_3:7865045-7865064 | Msa0795820:intron | 35.0% | |
TACTAGTCAATGCATGATAC+AGG | + | chr5_3:7865114-7865133 | Msa0795820:intron | 35.0% | |
GATTAACACTTCCTAAATGG+TGG | + | chr5_3:7865352-7865371 | Msa0795820:intron | 35.0% | |
AAAAAAGAAACATGTTGGCC+TGG | + | chr5_3:7865534-7865553 | Msa0795820:intron | 35.0% | |
! | AAAAAGAAACATGTTGGCCT+GGG | + | chr5_3:7865535-7865554 | Msa0795820:intron | 35.0% |
!!! | GTAGCATATTGGTTTTCACA+TGG | - | chr5_3:7865649-7865668 | None:intergenic | 35.0% |
TCACAAGTTCAATGCCTATT+TGG | + | chr5_3:7865704-7865723 | Msa0795820:intron | 35.0% | |
AAGTTCAATGCCTATTTGGA+TGG | + | chr5_3:7865708-7865727 | Msa0795820:intron | 35.0% | |
! | ATTTTCAATTGTACAGCCAG+TGG | + | chr5_3:7865744-7865763 | Msa0795820:intron | 35.0% |
TGAAATGAAAGGGGAACTAA+AGG | - | chr5_3:7865770-7865789 | None:intergenic | 35.0% | |
TCCCCTTTCATTTCATATCT+AGG | + | chr5_3:7865775-7865794 | Msa0795820:intron | 35.0% | |
!! | AAGAACTAAAAGGAGGCATT+TGG | - | chr5_3:7865848-7865867 | None:intergenic | 35.0% |
!!! | AAATGCCTCCTTTTAGTTCT+TGG | + | chr5_3:7865847-7865866 | Msa0795820:intron | 35.0% |
TATCACAGCCAAGAACTAAA+AGG | - | chr5_3:7865858-7865877 | None:intergenic | 35.0% | |
CATTTGTAAGCCTCATGATT+AGG | - | chr5_3:7865912-7865931 | None:intergenic | 35.0% | |
AACTTGTAAGCCTCAAGATT+AGG | - | chr5_3:7865954-7865973 | None:intergenic | 35.0% | |
CAGATCTGATATGTCTTCTA+TGG | - | chr5_3:7866044-7866063 | None:intergenic | 35.0% | |
!! | GTTGTTATGAAAGCGCTATA+TGG | + | chr5_3:7866222-7866241 | Msa0795820:CDS | 35.0% |
ATTCTGGTCAACTTAAGGTA+TGG | + | chr5_3:7866349-7866368 | Msa0795820:intron | 35.0% | |
TAAGTCTAAAGACTTACACC+TGG | - | chr5_3:7866585-7866604 | None:intergenic | 35.0% | |
AAAAAACTACGATGAGGAAG+GGG | - | chr5_3:7866686-7866705 | None:intergenic | 35.0% | |
GAAAAAACTACGATGAGGAA+GGG | - | chr5_3:7866687-7866706 | None:intergenic | 35.0% | |
AGAAAAAACTACGATGAGGA+AGG | - | chr5_3:7866688-7866707 | None:intergenic | 35.0% | |
TTGGAGAAAAAACTACGATG+AGG | - | chr5_3:7866692-7866711 | None:intergenic | 35.0% | |
GGAATCACAAGTTTCATTGT+TGG | - | chr5_3:7866711-7866730 | None:intergenic | 35.0% | |
!! | TGAGATTGTTGATGACAGAA+TGG | - | chr5_3:7866753-7866772 | None:intergenic | 35.0% |
TGCTGCAAACTCCTTTAATT+AGG | + | chr5_3:7867381-7867400 | Msa0795820:intron | 35.0% | |
ACTCCTTTAATTAGGCATGA+TGG | + | chr5_3:7867389-7867408 | Msa0795820:intron | 35.0% | |
CTCCTTTAATTAGGCATGAT+GGG | + | chr5_3:7867390-7867409 | Msa0795820:intron | 35.0% | |
AACCCATCATGCCTAATTAA+AGG | - | chr5_3:7867395-7867414 | None:intergenic | 35.0% | |
! | TTTTTGCATCTTCGCGATAA+AGG | - | chr5_3:7867652-7867671 | None:intergenic | 35.0% |
! | GTGCTCCCAAAACTTAATTT+TGG | - | chr5_3:7867823-7867842 | None:intergenic | 35.0% |
! | TACAACAGTTTAGTTTCTCC+TGG | - | chr5_3:7867932-7867951 | None:intergenic | 35.0% |
!! | TAATACCTTGTGTTGATTGC+CGG | - | chr5_3:7867972-7867991 | None:intergenic | 35.0% |
! | GAGTATAAACCTTTTGCATC+TGG | + | chr5_3:7868024-7868043 | Msa0795820:intron | 35.0% |
! | ATAAACCTTTTGCATCTGGT+TGG | + | chr5_3:7868028-7868047 | Msa0795820:intron | 35.0% |
!! | TTGCCTTGTTTACATACTTG+AGG | + | chr5_3:7868183-7868202 | Msa0795820:three_prime_UTR | 35.0% |
! | ACCTTCAAGCTACAATTTTC+AGG | + | chr5_3:7868243-7868262 | Msa0795820:three_prime_UTR | 35.0% |
! | CCCTTATTTCATCATTTGCA+GGG | - | chr5_3:7868317-7868336 | None:intergenic | 35.0% |
CCCTGCAAATGATGAAATAA+GGG | + | chr5_3:7868314-7868333 | Msa0795820:three_prime_UTR | 35.0% | |
!!! | TGATGAAATAAGGGCGTTTT+AGG | + | chr5_3:7868323-7868342 | Msa0795820:three_prime_UTR | 35.0% |
AGGAACATCACACAAAATTG+TGG | - | chr5_3:7868409-7868428 | None:intergenic | 35.0% | |
TGGGCAAGAATGAACTTATA+TGG | - | chr5_3:7868461-7868480 | None:intergenic | 35.0% | |
ATAAGTTCATTCTTGCCCAA+TGG | + | chr5_3:7868462-7868481 | Msa0795820:three_prime_UTR | 35.0% | |
CAAGAAGTGACAATAACAAC+CGG | + | chr5_3:7868526-7868545 | Msa0795820:three_prime_UTR | 35.0% | |
TCCCAAACAAAACATCCACA+AGG | - | chr5_3:7858157-7858176 | None:intergenic | 40.0% | |
AGAGAAATTGTGAATGGCGA+GGG | - | chr5_3:7858220-7858239 | None:intergenic | 40.0% | |
GAATTGGGAGAGGGTTATTA+GGG | - | chr5_3:7858249-7858268 | None:intergenic | 40.0% | |
AGAATTGGGAGAGGGTTATT+AGG | - | chr5_3:7858250-7858269 | None:intergenic | 40.0% | |
!! | GATTGAAGGTAGTGGAGAAT+TGG | - | chr5_3:7858265-7858284 | None:intergenic | 40.0% |
!! | AGAGGATTTTGGTACTTGTC+TGG | - | chr5_3:7858418-7858437 | None:intergenic | 40.0% |
TTCAGATCCGAATAAGAGAC+AGG | + | chr5_3:7858495-7858514 | Msa0795820:CDS | 40.0% | |
GGTATGGAAGGATTGAAATC+TGG | + | chr5_3:7858532-7858551 | Msa0795820:CDS | 40.0% | |
GGAAGGATTGAAATCTGGTT+TGG | + | chr5_3:7858537-7858556 | Msa0795820:CDS | 40.0% | |
TGAAGAGATTAAAGCCGAGT+TGG | + | chr5_3:7858585-7858604 | Msa0795820:CDS | 40.0% | |
AAGAAGGGAACATGAGAAGA+TGG | + | chr5_3:7858621-7858640 | Msa0795820:CDS | 40.0% | |
! | GTGGCAAGTTTTCAATCTTC+CGG | + | chr5_3:7858643-7858662 | Msa0795820:CDS | 40.0% |
! | TGGCAAGTTTTCAATCTTCC+GGG | + | chr5_3:7858644-7858663 | Msa0795820:CDS | 40.0% |
CAAATTAGCCAAAATCGTCC+CGG | - | chr5_3:7858665-7858684 | None:intergenic | 40.0% | |
!! | AGCTAGCTTGTAGTTGATAG+TGG | + | chr5_3:7859065-7859084 | Msa0795820:intron | 40.0% |
AAGTCCAGGGATTAATGAAC+TGG | + | chr5_3:7859241-7859260 | Msa0795820:intron | 40.0% | |
TTTATCCCATTAAGTGGGGT+CGG | - | chr5_3:7859311-7859330 | None:intergenic | 40.0% | |
GGACAAAAACTGAAATCTCC+TGG | + | chr5_3:7859431-7859450 | Msa0795820:intron | 40.0% | |
AAATATGTTCGTGGTCCAAG+AGG | + | chr5_3:7859493-7859512 | Msa0795820:intron | 40.0% | |
!! | TCCAAGAGGTGTCAGTTTAA+TGG | + | chr5_3:7859507-7859526 | Msa0795820:intron | 40.0% |
ACCATTAAACTGACACCTCT+TGG | - | chr5_3:7859511-7859530 | None:intergenic | 40.0% | |
AGCTGGACTTTGTAATCTCA+AGG | + | chr5_3:7859531-7859550 | Msa0795820:intron | 40.0% | |
GCTGGACTTTGTAATCTCAA+GGG | + | chr5_3:7859532-7859551 | Msa0795820:intron | 40.0% | |
! | GATGTTTCTGAGCATCAGAA+TGG | + | chr5_3:7859760-7859779 | Msa0795820:intron | 40.0% |
TTAGCAGTTGAAGGACATCA+AGG | + | chr5_3:7859845-7859864 | Msa0795820:CDS | 40.0% | |
TAATTGGAGTGCAGACATCA+CGG | + | chr5_3:7859954-7859973 | Msa0795820:CDS | 40.0% | |
AGTGTGATGATATAACGCTG+GGG | - | chr5_3:7860065-7860084 | None:intergenic | 40.0% | |
GAGTGTGATGATATAACGCT+GGG | - | chr5_3:7860066-7860085 | None:intergenic | 40.0% | |
TGAGTGTGATGATATAACGC+TGG | - | chr5_3:7860067-7860086 | None:intergenic | 40.0% | |
!! | CATTTGTTGTTTCTGACAGC+TGG | - | chr5_3:7860158-7860177 | None:intergenic | 40.0% |
CAGCTGTCAGAAACAACAAA+TGG | + | chr5_3:7860156-7860175 | Msa0795820:CDS | 40.0% | |
ATGTATGCTCTTCTATGCCT+TGG | + | chr5_3:7860181-7860200 | Msa0795820:intron | 40.0% | |
AAAGGAATGATCTGTCTGCA+TGG | + | chr5_3:7860429-7860448 | Msa0795820:intron | 40.0% | |
TGTTGGCCAATTCAAAGCAT+TGG | + | chr5_3:7860585-7860604 | Msa0795820:intron | 40.0% | |
!!! | TTTGGCTTTTTGTTGCCTCA+GGG | + | chr5_3:7860612-7860631 | Msa0795820:intron | 40.0% |
GGAAGAAAGAAGACGAGAAA+AGG | + | chr5_3:7860739-7860758 | Msa0795820:CDS | 40.0% | |
! | TCCACCATTCTACTCTGAAA+AGG | + | chr5_3:7860865-7860884 | Msa0795820:intron | 40.0% |
! | CCACCATTCTACTCTGAAAA+GGG | + | chr5_3:7860866-7860885 | Msa0795820:intron | 40.0% |
! | CACCATTCTACTCTGAAAAG+GGG | + | chr5_3:7860867-7860886 | Msa0795820:intron | 40.0% |
CTTTCTCAACTCCTTTAGCT+CGG | + | chr5_3:7860998-7861017 | Msa0795820:intron | 40.0% | |
TCTAAATCTCATGGCTGCAT+TGG | + | chr5_3:7861067-7861086 | Msa0795820:CDS | 40.0% | |
TGTCACTGTATTGTTGGCAA+AGG | + | chr5_3:7861181-7861200 | Msa0795820:intron | 40.0% | |
TTGTTGGCAAAGGTCTATTG+TGG | + | chr5_3:7861191-7861210 | Msa0795820:intron | 40.0% | |
!! | AAAAGGAGGTGTTGACTAGA+TGG | - | chr5_3:7861380-7861399 | None:intergenic | 40.0% |
! | CTGGGGTCTATTTTCTTGTT+GGG | + | chr5_3:7861508-7861527 | Msa0795820:intron | 40.0% |
TAAATTGAAAGGGAAAGGCC+AGG | + | chr5_3:7861623-7861642 | Msa0795820:intron | 40.0% | |
CATTCGGATTCTTAAAGCAG+TGG | + | chr5_3:7861665-7861684 | Msa0795820:intron | 40.0% | |
!! | TTTTCTGCAGATGGTAGTGT+TGG | + | chr5_3:7861757-7861776 | Msa0795820:intron | 40.0% |
AGGAAACATGTCTGTTGTCT+AGG | + | chr5_3:7861830-7861849 | Msa0795820:intron | 40.0% | |
TTCAGTGTAGAGGTGAAACT+TGG | + | chr5_3:7861901-7861920 | Msa0795820:intron | 40.0% | |
TGATACAGTCTCATCTTAGG+TGG | + | chr5_3:7862044-7862063 | Msa0795820:intron | 40.0% | |
!! | CTGGATCTCTCTTTAAGGTT+TGG | - | chr5_3:7862198-7862217 | None:intergenic | 40.0% |
! | AATACTTGATAGCCTGTAGG+TGG | + | chr5_3:7862281-7862300 | Msa0795820:intron | 40.0% |
CTATTAGCATAACCACCTAC+AGG | - | chr5_3:7862296-7862315 | None:intergenic | 40.0% | |
TCTTCCATTGAGATGGAAGT+TGG | + | chr5_3:7862409-7862428 | Msa0795820:CDS | 40.0% | |
GTTGTATGTAGTAGGACTTC+AGG | + | chr5_3:7862471-7862490 | Msa0795820:CDS | 40.0% | |
AGCCCCATGTGTAAAAAACA+GGG | - | chr5_3:7862792-7862811 | None:intergenic | 40.0% | |
TGAGGAAAAGGAGAGTGAAA+AGG | - | chr5_3:7862964-7862983 | None:intergenic | 40.0% | |
TCATGCCAGTCTCTTTAGTA+TGG | - | chr5_3:7862987-7863006 | None:intergenic | 40.0% | |
AAAGAGACTGGCATGATTTC+TGG | + | chr5_3:7862991-7863010 | Msa0795820:intron | 40.0% | |
AAGAGACTGGCATGATTTCT+GGG | + | chr5_3:7862992-7863011 | Msa0795820:intron | 40.0% | |
! | TCTGGGATGTGGTACTTTAA+TGG | + | chr5_3:7863090-7863109 | Msa0795820:intron | 40.0% |
ATAGGTGGAAACTGGAAACA+AGG | - | chr5_3:7863203-7863222 | None:intergenic | 40.0% | |
TTGTTTCCAGTTTCCACCTA+TGG | + | chr5_3:7863202-7863221 | Msa0795820:intron | 40.0% | |
!! | AACCTTTTCAGGGTATTTCC+TGG | + | chr5_3:7863371-7863390 | Msa0795820:intron | 40.0% |
AATGGTGTCTAGCATCTATC+AGG | - | chr5_3:7863467-7863486 | None:intergenic | 40.0% | |
!! | ATGACTTGTTGATCCAATGG+TGG | + | chr5_3:7863591-7863610 | Msa0795820:intron | 40.0% |
ACAAGTGTTCTTTCCACCAT+TGG | - | chr5_3:7863607-7863626 | None:intergenic | 40.0% | |
TTAAGCAACTCTTAGGGTAG+AGG | + | chr5_3:7863934-7863953 | Msa0795820:intron | 40.0% | |
GTTCACAAAGGAAGCTAAAC+AGG | - | chr5_3:7864011-7864030 | None:intergenic | 40.0% | |
! | TACAGTACCGAAGTTCACAA+AGG | - | chr5_3:7864023-7864042 | None:intergenic | 40.0% |
! | TTGAACCCTATGTTTGCTAC+TGG | + | chr5_3:7864205-7864224 | Msa0795820:CDS | 40.0% |
TTGCTTGCAATTGTCTCCAT+TGG | + | chr5_3:7864478-7864497 | Msa0795820:intron | 40.0% | |
GGAAAAAATGCCGCAGAAAA+AGG | + | chr5_3:7865295-7865314 | Msa0795820:intron | 40.0% | |
AAAAATGCCGCAGAAAAAGG+AGG | + | chr5_3:7865298-7865317 | Msa0795820:intron | 40.0% | |
! | CTTTCTTCCTCCTTTTTCTG+CGG | - | chr5_3:7865308-7865327 | None:intergenic | 40.0% |
TAACACTTCCTAAATGGTGG+TGG | + | chr5_3:7865355-7865374 | Msa0795820:intron | 40.0% | |
CAACTATGGCAGTAGCATAT+TGG | - | chr5_3:7865660-7865679 | None:intergenic | 40.0% | |
CAATATGCTACTGCCATAGT+TGG | + | chr5_3:7865658-7865677 | Msa0795820:intron | 40.0% | |
!! | TCTAGCTCCCTCTGTATTTT+GGG | - | chr5_3:7865814-7865833 | None:intergenic | 40.0% |
!!! | TTCTAGCTCCCTCTGTATTT+TGG | - | chr5_3:7865815-7865834 | None:intergenic | 40.0% |
CAGTTTGAGTCCTAATCATG+AGG | + | chr5_3:7865899-7865918 | Msa0795820:intron | 40.0% | |
CCTCAAGATTAGGACTCAAA+CGG | - | chr5_3:7865944-7865963 | None:intergenic | 40.0% | |
ATGCACACATTTATGCAGAC+AGG | - | chr5_3:7865990-7866009 | None:intergenic | 40.0% | |
AACAAGCAATTAGAAACGGG+TGG | + | chr5_3:7866195-7866214 | Msa0795820:CDS | 40.0% | |
ACTTGTGATTCCGTTTACTG+TGG | + | chr5_3:7866719-7866738 | Msa0795820:intron | 40.0% | |
GGATCTCAAACCACAGTAAA+CGG | - | chr5_3:7866732-7866751 | None:intergenic | 40.0% | |
GTGGACAGATCAGAAATCAA+AGG | - | chr5_3:7867094-7867113 | None:intergenic | 40.0% | |
CCAGAACAAACAACAACCAA+GGG | - | chr5_3:7867123-7867142 | None:intergenic | 40.0% | |
GTTCTGGCAAAACTAACTGA+AGG | + | chr5_3:7867136-7867155 | Msa0795820:intron | 40.0% | |
TTGGTGTAAGTCTTTACACC+TGG | + | chr5_3:7867257-7867276 | Msa0795820:intron | 40.0% | |
! | CACGAAGGTGTAAAGAAATC+AGG | + | chr5_3:7867881-7867900 | Msa0795820:CDS | 40.0% |
! | AGTTTAGTTTCTCCTGGACA+AGG | - | chr5_3:7867926-7867945 | None:intergenic | 40.0% |
TACAACCAACCAGATGCAAA+AGG | - | chr5_3:7868036-7868055 | None:intergenic | 40.0% | |
! | TTTGCATCTGGTTGGTTGTA+TGG | + | chr5_3:7868036-7868055 | Msa0795820:intron | 40.0% |
! | TTGCATCTGGTTGGTTGTAT+GGG | + | chr5_3:7868037-7868056 | Msa0795820:intron | 40.0% |
TGAACAATTAGTGATACCCC+AGG | + | chr5_3:7868099-7868118 | Msa0795820:CDS | 40.0% | |
GAACAATTAGTGATACCCCA+GGG | + | chr5_3:7868100-7868119 | Msa0795820:CDS | 40.0% | |
GTAAACAAGGCAAAACTGCA+GGG | - | chr5_3:7868176-7868195 | None:intergenic | 40.0% | |
TGTAAACAAGGCAAAACTGC+AGG | - | chr5_3:7868177-7868196 | None:intergenic | 40.0% | |
ACTGTTAGATGGAATGCAAG+AGG | + | chr5_3:7868219-7868238 | Msa0795820:three_prime_UTR | 40.0% | |
GCCTGAAAATTGTAGCTTGA+AGG | - | chr5_3:7868247-7868266 | None:intergenic | 40.0% | |
GCCCTGCAAATGATGAAATA+AGG | + | chr5_3:7868313-7868332 | Msa0795820:three_prime_UTR | 40.0% | |
! | GCCCTTATTTCATCATTTGC+AGG | - | chr5_3:7868318-7868337 | None:intergenic | 40.0% |
AAAATTGTGGTACAGCAGCA+GGG | - | chr5_3:7868396-7868415 | None:intergenic | 40.0% | |
CAACATTGTCCTACTCTCCA+AGG | + | chr5_3:7858107-7858126 | Msa0795820:five_prime_UTR | 45.0% | |
TCTTCTCTTCCTTGGAGAGT+AGG | - | chr5_3:7858119-7858138 | None:intergenic | 45.0% | |
TGTGAATGGCGAGGGTTTAA+GGG | - | chr5_3:7858212-7858231 | None:intergenic | 45.0% | |
TTGTGAATGGCGAGGGTTTA+AGG | - | chr5_3:7858213-7858232 | None:intergenic | 45.0% | |
CAGAGAAATTGTGAATGGCG+AGG | - | chr5_3:7858221-7858240 | None:intergenic | 45.0% | |
GATGATGCGATTGAAGGTAG+TGG | - | chr5_3:7858273-7858292 | None:intergenic | 45.0% | |
CATTGGGATGATGCGATTGA+AGG | - | chr5_3:7858279-7858298 | None:intergenic | 45.0% | |
CAATCGCATCATCCCAATGA+TGG | + | chr5_3:7858280-7858299 | Msa0795820:five_prime_UTR | 45.0% | |
ATTTCTTCGTCGGAGGATTC+GGG | - | chr5_3:7858359-7858378 | None:intergenic | 45.0% | |
GATTTCTTCGTCGGAGGATT+CGG | - | chr5_3:7858360-7858379 | None:intergenic | 45.0% | |
AGCTTTGCGGATTTCTTCGT+CGG | - | chr5_3:7858369-7858388 | None:intergenic | 45.0% | |
TCCGCAAAGCTTATCGTCAA+TGG | + | chr5_3:7858378-7858397 | Msa0795820:exon | 45.0% | |
CCCATTGACGATAAGCTTTG+CGG | - | chr5_3:7858382-7858401 | None:intergenic | 45.0% | |
CCGCAAAGCTTATCGTCAAT+GGG | + | chr5_3:7858379-7858398 | Msa0795820:exon | 45.0% | |
! | TTTGGAACTTGGTTCGAGGT+TGG | + | chr5_3:7858555-7858574 | Msa0795820:CDS | 45.0% |
! | AGATTAAAGCCGAGTTGGAG+AGG | + | chr5_3:7858590-7858609 | Msa0795820:CDS | 45.0% |
TCTCTTCAACCTCTCCAACT+CGG | - | chr5_3:7858602-7858621 | None:intergenic | 45.0% | |
TGGAGAGGTTGAAGAGAAGA+AGG | + | chr5_3:7858605-7858624 | Msa0795820:CDS | 45.0% | |
GGAGAGGTTGAAGAGAAGAA+GGG | + | chr5_3:7858606-7858625 | Msa0795820:CDS | 45.0% | |
AAGGGAACATGAGAAGATGG+TGG | + | chr5_3:7858624-7858643 | Msa0795820:CDS | 45.0% | |
! | TCAATCTTCCGGGACGATTT+TGG | + | chr5_3:7858654-7858673 | Msa0795820:CDS | 45.0% |
TCTGTGCCGCAGTATTTAGA+TGG | + | chr5_3:7858685-7858704 | Msa0795820:CDS | 45.0% | |
CCGTCACCATCTAAATACTG+CGG | - | chr5_3:7858694-7858713 | None:intergenic | 45.0% | |
CCGCAGTATTTAGATGGTGA+CGG | + | chr5_3:7858691-7858710 | Msa0795820:CDS | 45.0% | |
!! | ATGGTGACGGTCTCTTTAGA+GGG | + | chr5_3:7858704-7858723 | Msa0795820:CDS | 45.0% |
! | GTTGATAAGCGAACTGATCG+TGG | + | chr5_3:7858784-7858803 | Msa0795820:intron | 45.0% |
CACAGGGCATAATATCATCC+AGG | - | chr5_3:7859452-7859471 | None:intergenic | 45.0% | |
GGTGTCAGTTTAATGGTAGC+TGG | + | chr5_3:7859514-7859533 | Msa0795820:intron | 45.0% | |
GAGTTGAGATACCCATCCTT+AGG | + | chr5_3:7859706-7859725 | Msa0795820:intron | 45.0% | |
CGAAATGTTGTTGGGATTGG+CGG | + | chr5_3:7859818-7859837 | Msa0795820:CDS | 45.0% | |
! | GCCGGTTTACGTTCACTAAT+TGG | + | chr5_3:7859938-7859957 | Msa0795820:CDS | 45.0% |
!! | TTGTTGTTTCTGACAGCTGG+CGG | - | chr5_3:7860155-7860174 | None:intergenic | 45.0% |
TGGCTTTCAACCAGAAAACC+AGG | + | chr5_3:7860368-7860387 | Msa0795820:intron | 45.0% | |
!!! | GTTTGGCTTTTTGTTGCCTC+AGG | + | chr5_3:7860611-7860630 | Msa0795820:intron | 45.0% |
TCACAACCATCTGTAGCTGT+AGG | + | chr5_3:7860714-7860733 | Msa0795820:CDS | 45.0% | |
CACAACCATCTGTAGCTGTA+GGG | + | chr5_3:7860715-7860734 | Msa0795820:CDS | 45.0% | |
AAGTACCTTCACATCTGCAG+TGG | - | chr5_3:7860769-7860788 | None:intergenic | 45.0% | |
! | CCCTTTTCAGAGTAGAATGG+TGG | - | chr5_3:7860869-7860888 | None:intergenic | 45.0% |
! | CTCCCCTTTTCAGAGTAGAA+TGG | - | chr5_3:7860872-7860891 | None:intergenic | 45.0% |
AAATCTCATGGCTGCATTGG+AGG | + | chr5_3:7861070-7861089 | Msa0795820:CDS | 45.0% | |
GCTGCATTGGAGGAAGATTT+GGG | + | chr5_3:7861080-7861099 | Msa0795820:CDS | 45.0% | |
GTATGGAATGTCAGTGGCTA+AGG | - | chr5_3:7861464-7861483 | None:intergenic | 45.0% | |
GATGGTGTATGGAATGTCAG+TGG | - | chr5_3:7861470-7861489 | None:intergenic | 45.0% | |
! | GCTGGGGTCTATTTTCTTGT+TGG | + | chr5_3:7861507-7861526 | Msa0795820:intron | 45.0% |
!! | GGTAACTGCTTTTCTGCAGA+TGG | + | chr5_3:7861748-7861767 | Msa0795820:intron | 45.0% |
! | GGAGAGTATACAACTCCACA+AGG | + | chr5_3:7861922-7861941 | Msa0795820:intron | 45.0% |
TCCATTGAGATGGAAGTTGG+TGG | + | chr5_3:7862412-7862431 | Msa0795820:CDS | 45.0% | |
ACCACCAACTTCCATCTCAA+TGG | - | chr5_3:7862416-7862435 | None:intergenic | 45.0% | |
!! | ATTGAGATGGAAGTTGGTGG+TGG | + | chr5_3:7862415-7862434 | Msa0795820:CDS | 45.0% |
! | ACACTCTTTAAAAGGGCAGC+CGG | + | chr5_3:7862694-7862713 | Msa0795820:intron | 45.0% |
CCTACAACACACCAATTGGT+GGG | - | chr5_3:7862761-7862780 | None:intergenic | 45.0% | |
CAGCCCCATGTGTAAAAAAC+AGG | - | chr5_3:7862793-7862812 | None:intergenic | 45.0% | |
!! | TTACACATGGGGCTGTTTCT+AGG | + | chr5_3:7862798-7862817 | Msa0795820:intron | 45.0% |
GTTGTTGTCACGTGACTCAA+AGG | - | chr5_3:7862826-7862845 | None:intergenic | 45.0% | |
GAGAGTGAAAAGGCTAGTGT+AGG | - | chr5_3:7862954-7862973 | None:intergenic | 45.0% | |
CCAGTCTCTTTAGTATGGTG+AGG | - | chr5_3:7862982-7863001 | None:intergenic | 45.0% | |
CCTCACCATACTAAAGAGAC+TGG | + | chr5_3:7862979-7862998 | Msa0795820:intron | 45.0% | |
AGAGACTGGCATGATTTCTG+GGG | + | chr5_3:7862993-7863012 | Msa0795820:intron | 45.0% | |
!! | GAACCCTAAAGTGTTGGGAA+GGG | - | chr5_3:7863256-7863275 | None:intergenic | 45.0% |
CTCCAGGAAATACCCTGAAA+AGG | - | chr5_3:7863376-7863395 | None:intergenic | 45.0% | |
GTGGAAAGAACACTTGTGCA+TGG | + | chr5_3:7863610-7863629 | Msa0795820:intron | 45.0% | |
CAAAGGAAGCTAAACAGGGT+AGG | - | chr5_3:7864006-7864025 | None:intergenic | 45.0% | |
ACGCTCCAGTAGCAAACATA+GGG | - | chr5_3:7864213-7864232 | None:intergenic | 45.0% | |
AACGCTCCAGTAGCAAACAT+AGG | - | chr5_3:7864214-7864233 | None:intergenic | 45.0% | |
!! | TAAGCAGAAGGCTCTAGAGA+AGG | + | chr5_3:7864921-7864940 | Msa0795820:CDS | 45.0% |
GGAGGGAAAAACTTCTACTC+AGG | + | chr5_3:7864942-7864961 | Msa0795820:CDS | 45.0% | |
!! | TCCTAAATGGTGGTGGTTGT+CGG | + | chr5_3:7865362-7865381 | Msa0795820:intron | 45.0% |
! | AAACATGTTGGCCTGGGTTT+GGG | + | chr5_3:7865541-7865560 | Msa0795820:intron | 45.0% |
ATGAAGTTGGATGGCCATAG+CGG | - | chr5_3:7865618-7865637 | None:intergenic | 45.0% | |
GCAGACACAATGAAGTTGGA+TGG | - | chr5_3:7865627-7865646 | None:intergenic | 45.0% | |
CATGGCAGACACAATGAAGT+TGG | - | chr5_3:7865631-7865650 | None:intergenic | 45.0% | |
AGCACTAGCCCAAAATACAG+AGG | + | chr5_3:7865803-7865822 | Msa0795820:intron | 45.0% | |
GCACTAGCCCAAAATACAGA+GGG | + | chr5_3:7865804-7865823 | Msa0795820:intron | 45.0% | |
CACAGCCAAGAACTAAAAGG+AGG | - | chr5_3:7865855-7865874 | None:intergenic | 45.0% | |
CCGTTTGAGTCCTAATCTTG+AGG | + | chr5_3:7865941-7865960 | Msa0795820:intron | 45.0% | |
TTGTGCAGGTTCAAGAAGCA+AGG | + | chr5_3:7866118-7866137 | Msa0795820:intron | 45.0% | |
TGTGCAGGTTCAAGAAGCAA+GGG | + | chr5_3:7866119-7866138 | Msa0795820:intron | 45.0% | |
! | AGACTTACACCTGGTGTCAA+CGG | - | chr5_3:7866576-7866595 | None:intergenic | 45.0% |
!! | CCCTTGGTTGTTGTTTGTTC+TGG | + | chr5_3:7867120-7867139 | Msa0795820:intron | 45.0% |
GCCAGAACAAACAACAACCA+AGG | - | chr5_3:7867124-7867143 | None:intergenic | 45.0% | |
CCACATAAGGAACACATCAC+AGG | - | chr5_3:7867193-7867212 | None:intergenic | 45.0% | |
CCTGTGATGTGTTCCTTATG+TGG | + | chr5_3:7867190-7867209 | Msa0795820:intron | 45.0% | |
! | GTCTTTACACCTGGTGTCAA+CGG | + | chr5_3:7867266-7867285 | Msa0795820:intron | 45.0% |
TGCATCTTCGCGATAAAGGA+AGG | - | chr5_3:7867648-7867667 | None:intergenic | 45.0% | |
! | TGGGAGCACACCTGAAATAA+TGG | + | chr5_3:7867834-7867853 | Msa0795820:intron | 45.0% |
TTGTTGATGCAGCTTCACGA+AGG | + | chr5_3:7867866-7867885 | Msa0795820:intron | 45.0% | |
! | GGATTTTGTGATCCTTGTCC+AGG | + | chr5_3:7867911-7867930 | Msa0795820:CDS | 45.0% |
TATGTAGAGTACGCTCATGC+CGG | + | chr5_3:7867950-7867969 | Msa0795820:CDS | 45.0% | |
TTATATCCTGTGGATGCCCT+GGG | - | chr5_3:7868119-7868138 | None:intergenic | 45.0% | |
TTTATATCCTGTGGATGCCC+TGG | - | chr5_3:7868120-7868139 | None:intergenic | 45.0% | |
!! | AGCTACAATTTTCAGGCCAG+TGG | + | chr5_3:7868250-7868269 | Msa0795820:three_prime_UTR | 45.0% |
!! | GCTACAATTTTCAGGCCAGT+GGG | + | chr5_3:7868251-7868270 | Msa0795820:three_prime_UTR | 45.0% |
CAAAATTGTGGTACAGCAGC+AGG | - | chr5_3:7868397-7868416 | None:intergenic | 45.0% | |
ACGGCACTCGATGTTATTAC+CGG | - | chr5_3:7868548-7868567 | None:intergenic | 45.0% | |
!!! | TTTATTTTTTTAAATAATTG+AGG | - | chr5_3:7859633-7859652 | None:intergenic | 5.0% |
!! | TTTCATTATTTATTAAATAT+TGG | - | chr5_3:7865247-7865266 | None:intergenic | 5.0% |
!! | TATTTAATAAATAATGAAAA+AGG | + | chr5_3:7865248-7865267 | Msa0795820:intron | 5.0% |
CTCCAAGGAAGAGAAGAGAG+TGG | + | chr5_3:7858122-7858141 | Msa0795820:five_prime_UTR | 50.0% | |
GTCCACTCTCTTCTCTTCCT+TGG | - | chr5_3:7858127-7858146 | None:intergenic | 50.0% | |
GAGTGGACCAAGATACCTTG+TGG | + | chr5_3:7858139-7858158 | Msa0795820:five_prime_UTR | 50.0% | |
!! | GGTAGTGGAGAATTGGGAGA+GGG | - | chr5_3:7858258-7858277 | None:intergenic | 50.0% |
!! | AGGTAGTGGAGAATTGGGAG+AGG | - | chr5_3:7858259-7858278 | None:intergenic | 50.0% |
TTTGCGGATTTCTTCGTCGG+AGG | - | chr5_3:7858366-7858385 | None:intergenic | 50.0% | |
GTGGCAGCATCTTTCATGAG+AGG | - | chr5_3:7858436-7858455 | None:intergenic | 50.0% | |
!! | CTGGTTTGGAACTTGGTTCG+AGG | + | chr5_3:7858551-7858570 | Msa0795820:CDS | 50.0% |
!! | GATGGTGACGGTCTCTTTAG+AGG | + | chr5_3:7858703-7858722 | Msa0795820:CDS | 50.0% |
! | GACGGTCTCTTTAGAGGGTA+TGG | + | chr5_3:7858709-7858728 | Msa0795820:intron | 50.0% |
! | AGCTAGCTTGTAGTTGGCAG+CGG | + | chr5_3:7858831-7858850 | Msa0795820:intron | 50.0% |
ATGTAGCCGACCCCACTTAA+TGG | + | chr5_3:7859302-7859321 | Msa0795820:intron | 50.0% | |
TGTAGCCGACCCCACTTAAT+GGG | + | chr5_3:7859303-7859322 | Msa0795820:intron | 50.0% | |
GGCGGCAATTTAGCAGTTGA+AGG | + | chr5_3:7859836-7859855 | Msa0795820:CDS | 50.0% | |
GCAGTTGAAGGACATCAAGG+TGG | + | chr5_3:7859848-7859867 | Msa0795820:CDS | 50.0% | |
GTTGAAGGACATCAAGGTGG+TGG | + | chr5_3:7859851-7859870 | Msa0795820:CDS | 50.0% | |
TCACACTCATCTGCAACAGC+AGG | + | chr5_3:7860078-7860097 | Msa0795820:CDS | 50.0% | |
!! | TGTTGTTTCTGACAGCTGGC+GGG | - | chr5_3:7860154-7860173 | None:intergenic | 50.0% |
TGGTTGAAAGCCAGATGCAG+TGG | - | chr5_3:7860361-7860380 | None:intergenic | 50.0% | |
AACCATCTGTAGCTGTAGGG+TGG | + | chr5_3:7860718-7860737 | Msa0795820:CDS | 50.0% | |
TTCCACCCTACAGCTACAGA+TGG | - | chr5_3:7860723-7860742 | None:intergenic | 50.0% | |
GTCCTTTCGAGACATCAGCT+CGG | + | chr5_3:7861026-7861045 | Msa0795820:CDS | 50.0% | |
TACCGAGCTGATGTCTCGAA+AGG | - | chr5_3:7861031-7861050 | None:intergenic | 50.0% | |
GGCTGCATTGGAGGAAGATT+TGG | + | chr5_3:7861079-7861098 | Msa0795820:CDS | 50.0% | |
GCATTGGAGGAAGATTTGGG+AGG | + | chr5_3:7861083-7861102 | Msa0795820:CDS | 50.0% | |
GGAAAGGCCAGGATAAAGTG+TGG | + | chr5_3:7861634-7861653 | Msa0795820:intron | 50.0% | |
AGCAGCTCCACACTTTATCC+TGG | - | chr5_3:7861644-7861663 | None:intergenic | 50.0% | |
AAGTGTGGAGCTGCTGCATT+CGG | + | chr5_3:7861649-7861668 | Msa0795820:intron | 50.0% | |
CTTAGGTGGTTTGACATGCG+TGG | + | chr5_3:7862058-7862077 | Msa0795820:intron | 50.0% | |
CTCCTAAGTAGTGCTTCCCT+GGG | - | chr5_3:7862090-7862109 | None:intergenic | 50.0% | |
TCTCCTAAGTAGTGCTTCCC+TGG | - | chr5_3:7862091-7862110 | None:intergenic | 50.0% | |
!! | AGATGGAAGTTGGTGGTGGA+AGG | + | chr5_3:7862419-7862438 | Msa0795820:CDS | 50.0% |
! | CCAGCGCACAGTACTGAATT+TGG | - | chr5_3:7862452-7862471 | None:intergenic | 50.0% |
CCAAATTCAGTACTGTGCGC+TGG | + | chr5_3:7862449-7862468 | Msa0795820:CDS | 50.0% | |
!! | GTGCGCTGGTTGTATGTAGT+AGG | + | chr5_3:7862463-7862482 | Msa0795820:CDS | 50.0% |
! | CACTCTTTAAAAGGGCAGCC+GGG | + | chr5_3:7862695-7862714 | Msa0795820:intron | 50.0% |
CCCACCAATTGGTGTGTTGT+AGG | + | chr5_3:7862758-7862777 | Msa0795820:intron | 50.0% | |
GCCTACAACACACCAATTGG+TGG | - | chr5_3:7862762-7862781 | None:intergenic | 50.0% | |
GCTGCCTACAACACACCAAT+TGG | - | chr5_3:7862765-7862784 | None:intergenic | 50.0% | |
ACAACTTTACCGTTGCGCCA+AGG | + | chr5_3:7862841-7862860 | Msa0795820:intron | 50.0% | |
TGTTAGAAAAGGGGGAGCCT+TGG | - | chr5_3:7862861-7862880 | None:intergenic | 50.0% | |
ACGGGTCCAACATGATTCAG+TGG | - | chr5_3:7862916-7862935 | None:intergenic | 50.0% | |
GGGAAGGGAGGATCATGAAA+TGG | - | chr5_3:7863241-7863260 | None:intergenic | 50.0% | |
TCCTCCCTTCCCAACACTTT+AGG | + | chr5_3:7863249-7863268 | Msa0795820:intron | 50.0% | |
CCTCCCTTCCCAACACTTTA+GGG | + | chr5_3:7863250-7863269 | Msa0795820:intron | 50.0% | |
!! | GGAACCCTAAAGTGTTGGGA+AGG | - | chr5_3:7863257-7863276 | None:intergenic | 50.0% |
! | GGGAGGAACCCTAAAGTGTT+GGG | - | chr5_3:7863261-7863280 | None:intergenic | 50.0% |
AGGGAGGAACCCTAAAGTGT+TGG | - | chr5_3:7863262-7863281 | None:intergenic | 50.0% | |
TGCATTGAACCCTAACGCGT+GGG | - | chr5_3:7863287-7863306 | None:intergenic | 50.0% | |
TTGCATTGAACCCTAACGCG+TGG | - | chr5_3:7863288-7863307 | None:intergenic | 50.0% | |
!! | CAGAAGGCTCTAGAGAAGGA+GGG | + | chr5_3:7864925-7864944 | Msa0795820:CDS | 50.0% |
TCCGACAACCACCACCATTT+AGG | - | chr5_3:7865366-7865385 | None:intergenic | 50.0% | |
!! | TAAATGGTGGTGGTTGTCGG+AGG | + | chr5_3:7865365-7865384 | Msa0795820:intron | 50.0% |
! | GAAACATGTTGGCCTGGGTT+TGG | + | chr5_3:7865540-7865559 | Msa0795820:intron | 50.0% |
GCATTGAACTTGTGACTCGC+AGG | - | chr5_3:7865699-7865718 | None:intergenic | 50.0% | |
AAAGGGGAACTAAAGGCCAC+TGG | - | chr5_3:7865763-7865782 | None:intergenic | 50.0% | |
TTCTTGAACCTGCACAACCG+GGG | - | chr5_3:7866115-7866134 | None:intergenic | 50.0% | |
CTTCTTGAACCTGCACAACC+GGG | - | chr5_3:7866116-7866135 | None:intergenic | 50.0% | |
GCTTCTTGAACCTGCACAAC+CGG | - | chr5_3:7866117-7866136 | None:intergenic | 50.0% | |
GCAATTAGAAACGGGTGGAC+TGG | + | chr5_3:7866200-7866219 | Msa0795820:CDS | 50.0% | |
ATCTGTCCACACACAACCCT+TGG | + | chr5_3:7867104-7867123 | Msa0795820:intron | 50.0% | |
CAACAACCAAGGGTTGTGTG+TGG | - | chr5_3:7867113-7867132 | None:intergenic | 50.0% | |
AGAGAGAGAGAGAGAGAGTC+AGG | - | chr5_3:7867294-7867313 | None:intergenic | 50.0% | |
TCATGCCGGCAATCAACACA+AGG | + | chr5_3:7867964-7867983 | Msa0795820:CDS | 50.0% | |
TATATCCTGTGGATGCCCTG+GGG | - | chr5_3:7868118-7868137 | None:intergenic | 50.0% | |
CATTTGCAGGGCGTAACAGA+AGG | - | chr5_3:7868305-7868324 | None:intergenic | 50.0% | |
GGCGAGGGTTTAAGGGTGAA+AGG | - | chr5_3:7858205-7858224 | None:intergenic | 55.0% | |
AGGATTCGGGTGAGAGGTTG+AGG | - | chr5_3:7858346-7858365 | None:intergenic | 55.0% | |
TGGAGTGCAGACATCACGGT+TGG | + | chr5_3:7859958-7859977 | Msa0795820:intron | 55.0% | |
GACTGCCACTGCAGATGTGA+AGG | + | chr5_3:7860761-7860780 | Msa0795820:CDS | 55.0% | |
! | CAACTCCTTTAGCTCGGCAC+AGG | + | chr5_3:7861004-7861023 | Msa0795820:intron | 55.0% |
AAGGACCTGTGCCGAGCTAA+AGG | - | chr5_3:7861012-7861031 | None:intergenic | 55.0% | |
!! | GACCCAGGGAAGCACTACTT+AGG | + | chr5_3:7862085-7862104 | Msa0795820:intron | 55.0% |
ACTAATGCTCCCGCATACGC+AGG | + | chr5_3:7862721-7862740 | Msa0795820:intron | 55.0% | |
CTAATGCTCCCGCATACGCA+GGG | + | chr5_3:7862722-7862741 | Msa0795820:intron | 55.0% | |
!! | CCCTAAAGTGTTGGGAAGGG+AGG | - | chr5_3:7863253-7863272 | None:intergenic | 55.0% |
GCATTGAACCCTAACGCGTG+GGG | - | chr5_3:7863286-7863305 | None:intergenic | 55.0% | |
!! | GCAGAAGGCTCTAGAGAAGG+AGG | + | chr5_3:7864924-7864943 | Msa0795820:CDS | 55.0% |
TTGAGACCTGACCCAAACCC+AGG | - | chr5_3:7865555-7865574 | None:intergenic | 55.0% | |
TGGGTTTGGGTCAGGTCTCA+AGG | + | chr5_3:7865554-7865573 | Msa0795820:intron | 55.0% | |
AGTCAGGATCCGTTGACACC+AGG | + | chr5_3:7866564-7866583 | Msa0795820:intron | 55.0% | |
AGTCAGGATCCGTTGACACC+AGG | - | chr5_3:7866564-7866583 | None:intergenic | 55.0% | |
ACATGCGTGGAGACGACCCA+GGG | + | chr5_3:7862071-7862090 | Msa0795820:intron | 60.0% | |
!! | TGCGGGAGCATTAGTGCACC+CGG | - | chr5_3:7862716-7862735 | None:intergenic | 60.0% |
TTCCTGGACCCTGCGTATGC+GGG | - | chr5_3:7862733-7862752 | None:intergenic | 60.0% | |
CTTCCTGGACCCTGCGTATG+CGG | - | chr5_3:7862734-7862753 | None:intergenic | 60.0% | |
GCATACGCAGGGTCCAGGAA+GGG | + | chr5_3:7862733-7862752 | Msa0795820:intron | 60.0% | |
CATACGCAGGGTCCAGGAAG+GGG | + | chr5_3:7862734-7862753 | Msa0795820:intron | 60.0% | |
CAATTGGTGGGACCCCTTCC+TGG | - | chr5_3:7862749-7862768 | None:intergenic | 60.0% | |
CAGGAAGGGGTCCCACCAAT+TGG | + | chr5_3:7862747-7862766 | Msa0795820:intron | 60.0% | |
GAACCCTAACGCGTGGGGAA+GGG | - | chr5_3:7863281-7863300 | None:intergenic | 60.0% | |
TGAACCCTAACGCGTGGGGA+AGG | - | chr5_3:7863282-7863301 | None:intergenic | 60.0% | |
! | TGTTGGCCTGGGTTTGGGTC+AGG | + | chr5_3:7865546-7865565 | Msa0795820:intron | 60.0% |
AACCGGGGAAGCAGAGGAAG+GGG | - | chr5_3:7866100-7866119 | None:intergenic | 60.0% | |
CAACCGGGGAAGCAGAGGAA+GGG | - | chr5_3:7866101-7866120 | None:intergenic | 60.0% | |
ACAACCGGGGAAGCAGAGGA+AGG | - | chr5_3:7866102-7866121 | None:intergenic | 60.0% | |
! | TGATACCCCAGGGCATCCAC+AGG | + | chr5_3:7868110-7868129 | Msa0795820:CDS | 60.0% |
CGTCGGAGGATTCGGGTGAG+AGG | - | chr5_3:7858352-7858371 | None:intergenic | 65.0% | |
GACATGCGTGGAGACGACCC+AGG | + | chr5_3:7862070-7862089 | Msa0795820:intron | 65.0% | |
CGCATACGCAGGGTCCAGGA+AGG | + | chr5_3:7862732-7862751 | Msa0795820:intron | 65.0% | |
AAGGGGGAGCCTTGGCGCAA+CGG | - | chr5_3:7862853-7862872 | None:intergenic | 65.0% | |
TCCTCCCTTCCCCACGCGTT+AGG | + | chr5_3:7863274-7863293 | Msa0795820:intron | 65.0% | |
CCTCCCTTCCCCACGCGTTA+GGG | + | chr5_3:7863275-7863294 | Msa0795820:intron | 65.0% | |
ACCCCCTTCCTCTGCTTCCC+CGG | + | chr5_3:7866095-7866114 | Msa0795820:intron | 65.0% | |
ACCGGGGAAGCAGAGGAAGG+GGG | - | chr5_3:7866099-7866118 | None:intergenic | 65.0% | |
CTGCACAACCGGGGAAGCAG+AGG | - | chr5_3:7866106-7866125 | None:intergenic | 65.0% | |
CTCTGCTTCCCCGGTTGTGC+AGG | + | chr5_3:7866104-7866123 | Msa0795820:intron | 65.0% | |
CTCCCGCATACGCAGGGTCC+AGG | + | chr5_3:7862728-7862747 | Msa0795820:intron | 70.0% | |
CCCTAACGCGTGGGGAAGGG+AGG | - | chr5_3:7863278-7863297 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_3 | gene | 7858107 | 7868612 | 7858107 | ID=Msa0795820;Name=Msa0795820 |
chr5_3 | mRNA | 7858107 | 7868612 | 7858107 | ID=Msa0795820-mRNA-1;Parent=Msa0795820;Name=Msa0795820-mRNA-1;_AED=0.03;_eAED=0.03;_QI=290|1|1|1|0.90|0.91|12|474|506 |
chr5_3 | exon | 7858107 | 7858725 | 7858107 | ID=Msa0795820-mRNA-1:exon:3210;Parent=Msa0795820-mRNA-1 |
chr5_3 | exon | 7859778 | 7859975 | 7859778 | ID=Msa0795820-mRNA-1:exon:3211;Parent=Msa0795820-mRNA-1 |
chr5_3 | exon | 7860068 | 7860182 | 7860068 | ID=Msa0795820-mRNA-1:exon:3212;Parent=Msa0795820-mRNA-1 |
chr5_3 | exon | 7860696 | 7860782 | 7860696 | ID=Msa0795820-mRNA-1:exon:3213;Parent=Msa0795820-mRNA-1 |
chr5_3 | exon | 7861016 | 7861104 | 7861016 | ID=Msa0795820-mRNA-1:exon:3214;Parent=Msa0795820-mRNA-1 |
chr5_3 | exon | 7862408 | 7862492 | 7862408 | ID=Msa0795820-mRNA-1:exon:3215;Parent=Msa0795820-mRNA-1 |
chr5_3 | exon | 7863382 | 7863435 | 7863382 | ID=Msa0795820-mRNA-1:exon:3216;Parent=Msa0795820-mRNA-1 |
chr5_3 | exon | 7864187 | 7864267 | 7864187 | ID=Msa0795820-mRNA-1:exon:3217;Parent=Msa0795820-mRNA-1 |
chr5_3 | exon | 7864886 | 7864963 | 7864886 | ID=Msa0795820-mRNA-1:exon:3218;Parent=Msa0795820-mRNA-1 |
chr5_3 | exon | 7866126 | 7866365 | 7866126 | ID=Msa0795820-mRNA-1:exon:3219;Parent=Msa0795820-mRNA-1 |
chr5_3 | exon | 7867878 | 7867985 | 7867878 | ID=Msa0795820-mRNA-1:exon:3220;Parent=Msa0795820-mRNA-1 |
chr5_3 | exon | 7868082 | 7868612 | 7868082 | ID=Msa0795820-mRNA-1:exon:3221;Parent=Msa0795820-mRNA-1 |
chr5_3 | five_prime_UTR | 7858107 | 7858396 | 7858107 | ID=Msa0795820-mRNA-1:five_prime_utr;Parent=Msa0795820-mRNA-1 |
chr5_3 | CDS | 7858397 | 7858725 | 7858397 | ID=Msa0795820-mRNA-1:cds;Parent=Msa0795820-mRNA-1 |
chr5_3 | CDS | 7859778 | 7859975 | 7859778 | ID=Msa0795820-mRNA-1:cds;Parent=Msa0795820-mRNA-1 |
chr5_3 | CDS | 7860068 | 7860182 | 7860068 | ID=Msa0795820-mRNA-1:cds;Parent=Msa0795820-mRNA-1 |
chr5_3 | CDS | 7860696 | 7860782 | 7860696 | ID=Msa0795820-mRNA-1:cds;Parent=Msa0795820-mRNA-1 |
chr5_3 | CDS | 7861016 | 7861104 | 7861016 | ID=Msa0795820-mRNA-1:cds;Parent=Msa0795820-mRNA-1 |
chr5_3 | CDS | 7862408 | 7862492 | 7862408 | ID=Msa0795820-mRNA-1:cds;Parent=Msa0795820-mRNA-1 |
chr5_3 | CDS | 7863382 | 7863435 | 7863382 | ID=Msa0795820-mRNA-1:cds;Parent=Msa0795820-mRNA-1 |
chr5_3 | CDS | 7864187 | 7864267 | 7864187 | ID=Msa0795820-mRNA-1:cds;Parent=Msa0795820-mRNA-1 |
chr5_3 | CDS | 7864886 | 7864963 | 7864886 | ID=Msa0795820-mRNA-1:cds;Parent=Msa0795820-mRNA-1 |
chr5_3 | CDS | 7866126 | 7866365 | 7866126 | ID=Msa0795820-mRNA-1:cds;Parent=Msa0795820-mRNA-1 |
chr5_3 | CDS | 7867878 | 7867985 | 7867878 | ID=Msa0795820-mRNA-1:cds;Parent=Msa0795820-mRNA-1 |
chr5_3 | CDS | 7868082 | 7868138 | 7868082 | ID=Msa0795820-mRNA-1:cds;Parent=Msa0795820-mRNA-1 |
chr5_3 | three_prime_UTR | 7868139 | 7868612 | 7868139 | ID=Msa0795820-mRNA-1:three_prime_utr;Parent=Msa0795820-mRNA-1 |
Gene Sequence |
Protein sequence |