AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0795820


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0795820 MtrunA17_Chr5g0399201 97.416 503 13 0 4 506 38 540 0.0 1024
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0795820 AT2G35720.1 61.972 497 186 1 5 501 42 535 0.0 639
Msa0795820 AT3G47940.1 60.000 50 17 2 5 53 31 78 2.81e-11 65.5

Find 169 sgRNAs with CRISPR-Local

Find 729 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGTGAATGGCGAGGGTTTA+AGG 0.122656 5_3:-7858210 None:intergenic
AGACAGGTTTATGATATTTA+TGG 0.168325 5_3:+7858511 Msa0795820:CDS
GCCGGTTTACGTTCACTAAT+TGG 0.209362 5_3:+7859938 Msa0795820:CDS
TCAATCTTCCGGGACGATTT+TGG 0.212595 5_3:+7858654 Msa0795820:CDS
CATCTTTCATGAGAGGATTT+TGG 0.213944 5_3:-7858426 None:intergenic
GCCCTGCAAATGATGAAATA+AGG 0.217665 5_3:+7868313 Msa0795820:three_prime_UTR
TTAAACCGTATTACCTTAAA+AGG 0.228193 5_3:+7864896 Msa0795820:CDS
GGCTGCATTGGAGGAAGATT+TGG 0.245321 5_3:+7861079 Msa0795820:CDS
TGCAACCAATGAACAATAAA+AGG 0.255425 5_3:-7868426 None:intergenic
AGAATTGGGAGAGGGTTATT+AGG 0.265413 5_3:-7858247 None:intergenic
GTCCACTCTCTTCTCTTCCT+TGG 0.268936 5_3:-7858124 None:intergenic
CCAGCGCACAGTACTGAATT+TGG 0.281518 5_3:-7862449 None:intergenic
GATTTCTTCGTCGGAGGATT+CGG 0.296432 5_3:-7858357 None:intergenic
TTTCATTTAAGGTTTGTTAT+TGG 0.305907 5_3:+7868492 Msa0795820:three_prime_UTR
TGGGCAAGAATGAACTTATA+TGG 0.332265 5_3:-7868458 None:intergenic
GAATTGGGAGAGGGTTATTA+GGG 0.341623 5_3:-7858246 None:intergenic
TAAGTGCCTTGGCTGATAAA+AGG 0.346620 5_3:-7868597 None:intergenic
TGTGAATGGCGAGGGTTTAA+GGG 0.347573 5_3:-7858209 None:intergenic
GATGGTGACGGTCTCTTTAG+AGG 0.353128 5_3:+7858703 Msa0795820:CDS
TTTATATCCTGTGGATGCCC+TGG 0.364969 5_3:-7868117 None:intergenic
GATTGAAGGTAGTGGAGAAT+TGG 0.365259 5_3:-7858262 None:intergenic
TTGAAATCTGGTTTGGAACT+TGG 0.365381 5_3:+7858544 Msa0795820:CDS
AACAACTTGTATTCGTCAAA+TGG 0.369969 5_3:+7866261 Msa0795820:CDS
GGTATGGAAGGATTGAAATC+TGG 0.376748 5_3:+7858532 Msa0795820:CDS
TCATAAACCTGTCTCTTATT+CGG 0.380932 5_3:-7858502 None:intergenic
TCCAATTAGTGAACGTAAAC+CGG 0.384708 5_3:-7859939 None:intergenic
GGAAGGATTGAAATCTGGTT+TGG 0.386145 5_3:+7858537 Msa0795820:CDS
TAATGATTCTGGTCAACTTA+AGG 0.387282 5_3:+7866344 Msa0795820:CDS
TGGAGAGGTTGAAGAGAAGA+AGG 0.387919 5_3:+7858605 Msa0795820:CDS
GCCCTTATTTCATCATTTGC+AGG 0.390253 5_3:-7868315 None:intergenic
TACAACAAAATGTAGCTAAT+AGG 0.392977 5_3:+7866166 Msa0795820:CDS
ATTTCTTCGTCGGAGGATTC+GGG 0.394666 5_3:-7858356 None:intergenic
GCTGCATTGGAGGAAGATTT+GGG 0.396220 5_3:+7861080 Msa0795820:CDS
TCCGCAAAGCTTATCGTCAA+TGG 0.396259 5_3:+7858378 Msa0795820:exon
GTTGTATGTAGTAGGACTTC+AGG 0.398493 5_3:+7862471 Msa0795820:CDS
CCCATTGACGATAAGCTTTG+CGG 0.402719 5_3:-7858379 None:intergenic
TAAATGAAAATTACAGCCAT+TGG 0.405863 5_3:-7868478 None:intergenic
TTATATCCTGTGGATGCCCT+GGG 0.405887 5_3:-7868116 None:intergenic
CATTTGTTGTTTCTGACAGC+TGG 0.407604 5_3:-7860155 None:intergenic
CACGAAGGTGTAAAGAAATC+AGG 0.413837 5_3:+7867881 Msa0795820:CDS
TAATACCTTGTGTTGATTGC+CGG 0.416603 5_3:-7867969 None:intergenic
ATTGAAGGTAGTGGAGAATT+GGG 0.418502 5_3:-7858261 None:intergenic
CGAAATGTTGTTGGGATTGG+CGG 0.418527 5_3:+7859818 Msa0795820:CDS
TGTAAAGAAATCAGGAATCA+TGG 0.420936 5_3:+7867889 Msa0795820:CDS
AGGATTCGGGTGAGAGGTTG+AGG 0.426031 5_3:-7858343 None:intergenic
CCCTGCAAATGATGAAATAA+GGG 0.427287 5_3:+7868314 Msa0795820:three_prime_UTR
TTGAACCCTATGTTTGCTAC+TGG 0.427445 5_3:+7864205 Msa0795820:CDS
TACAACAGTTTAGTTTCTCC+TGG 0.432887 5_3:-7867929 None:intergenic
TGTCAAAACGAAATGTTGTT+GGG 0.434109 5_3:+7859810 Msa0795820:CDS
AAAACATCCACAAGGTATCT+TGG 0.434823 5_3:-7858146 None:intergenic
GTTGTTATGAAAGCGCTATA+TGG 0.436734 5_3:+7866222 Msa0795820:CDS
AAATCTCATGGCTGCATTGG+AGG 0.439365 5_3:+7861070 Msa0795820:CDS
CGTTGAATCTTTCTAATGCA+TGG 0.443709 5_3:+7860127 Msa0795820:CDS
AAATGAAAATTACAGCCATT+GGG 0.452490 5_3:-7868477 None:intergenic
TTGTCAAAACGAAATGTTGT+TGG 0.453469 5_3:+7859809 Msa0795820:CDS
GCCTGAAAATTGTAGCTTGA+AGG 0.454345 5_3:-7868244 None:intergenic
CAAAATTGTGGTACAGCAGC+AGG 0.456849 5_3:-7868394 None:intergenic
GGCGGCAATTTAGCAGTTGA+AGG 0.457018 5_3:+7859836 Msa0795820:CDS
AAGAAGGGAACATGAGAAGA+TGG 0.457897 5_3:+7858621 Msa0795820:CDS
CTGGTTTGGAACTTGGTTCG+AGG 0.462985 5_3:+7858551 Msa0795820:CDS
AAACGAAATGTTGTTGGGAT+TGG 0.467280 5_3:+7859815 Msa0795820:CDS
AAGAATGAACTTATATGGTT+GGG 0.469538 5_3:-7868453 None:intergenic
GGTTTATGATATTTATGGTA+TGG 0.473781 5_3:+7858516 Msa0795820:CDS
AAGAAACAAGCAATTAGAAA+CGG 0.479082 5_3:+7866191 Msa0795820:CDS
CAATCGCATCATCCCAATGA+TGG 0.480172 5_3:+7858280 Msa0795820:five_prime_UTR
TCTAAATCTCATGGCTGCAT+TGG 0.480181 5_3:+7861067 Msa0795820:CDS
AGAAACAAGCAATTAGAAAC+GGG 0.485283 5_3:+7866192 Msa0795820:CDS
ACGGCACTCGATGTTATTAC+CGG 0.487856 5_3:-7868545 None:intergenic
TTCAGATCCGAATAAGAGAC+AGG 0.488853 5_3:+7858495 Msa0795820:CDS
CAAGAATGAACTTATATGGT+TGG 0.490807 5_3:-7868454 None:intergenic
CCGCAAAGCTTATCGTCAAT+GGG 0.491774 5_3:+7858379 Msa0795820:exon
TAATATTTCTTTATATCCTG+TGG 0.491894 5_3:-7868126 None:intergenic
TATGATATTTATGGTATGGA+AGG 0.492093 5_3:+7858520 Msa0795820:CDS
TTTCAGATACAACTCATGTT+GGG 0.497567 5_3:+7860690 Msa0795820:intron
TGTTGTTTCTGACAGCTGGC+GGG 0.500265 5_3:-7860151 None:intergenic
CATTGGGATGATGCGATTGA+AGG 0.501590 5_3:-7858276 None:intergenic
TCTTCCATTGAGATGGAAGT+TGG 0.502607 5_3:+7862409 Msa0795820:CDS
AGCTTTGCGGATTTCTTCGT+CGG 0.502755 5_3:-7858366 None:intergenic
GGAAGAAAGAAGACGAGAAA+AGG 0.504085 5_3:+7860739 Msa0795820:CDS
TTAACAATGTCTTTGAGAGA+TGG 0.505493 5_3:+7860102 Msa0795820:CDS
CCCTTATTTCATCATTTGCA+GGG 0.506393 5_3:-7868314 None:intergenic
TCTGTGCCGCAGTATTTAGA+TGG 0.507210 5_3:+7858685 Msa0795820:CDS
GCAATTAGAAACGGGTGGAC+TGG 0.509279 5_3:+7866200 Msa0795820:CDS
ACCACCAACTTCCATCTCAA+TGG 0.513249 5_3:-7862413 None:intergenic
AGAACAAAGTAAAACGATGC+TGG 0.514699 5_3:-7864241 None:intergenic
CAAGAAGTGACAATAACAAC+CGG 0.521357 5_3:+7868526 Msa0795820:three_prime_UTR
TTTGGAACTTGGTTCGAGGT+TGG 0.521456 5_3:+7858555 Msa0795820:CDS
GGAGAGGTTGAAGAGAAGAA+GGG 0.521692 5_3:+7858606 Msa0795820:CDS
TGGAGATTTGAATTCTGTCG+TGG 0.521929 5_3:+7863391 Msa0795820:CDS
TGTAAACAAGGCAAAACTGC+AGG 0.526095 5_3:-7868174 None:intergenic
ATTTCAGATACAACTCATGT+TGG 0.526912 5_3:+7860689 Msa0795820:intron
TCTTCTCTTCCTTGGAGAGT+AGG 0.529264 5_3:-7858116 None:intergenic
CAACTCCTTTAGCTCGGCAC+AGG 0.529594 5_3:+7861004 Msa0795820:intron
GGAGATTTGAATTCTGTCGT+GGG 0.529795 5_3:+7863392 Msa0795820:CDS
AGATTAAAGCCGAGTTGGAG+AGG 0.534621 5_3:+7858590 Msa0795820:CDS
GTAAAGAAATCAGGAATCAT+GGG 0.535679 5_3:+7867890 Msa0795820:CDS
ACGACAGAATTCAAATCTCC+AGG 0.537158 5_3:-7863389 None:intergenic
TCCATTGAGATGGAAGTTGG+TGG 0.539674 5_3:+7862412 Msa0795820:CDS
ATAGAATTTATTGCTTCAGC+CGG 0.541957 5_3:+7859920 Msa0795820:CDS
TCTCTTCAACCTCTCCAACT+CGG 0.543108 5_3:-7858599 None:intergenic
TTGTTGTTTCTGACAGCTGG+CGG 0.544720 5_3:-7860152 None:intergenic
CCAAATTCAGTACTGTGCGC+TGG 0.546174 5_3:+7862449 Msa0795820:CDS
TGAAGAGATTAAAGCCGAGT+TGG 0.546959 5_3:+7858585 Msa0795820:CDS
ATTAAGTCATCAACTTTCTG+AGG 0.548247 5_3:+7859889 Msa0795820:CDS
TCACAACCATCTGTAGCTGT+AGG 0.549045 5_3:+7860714 Msa0795820:CDS
CAGCTGTCAGAAACAACAAA+TGG 0.555163 5_3:+7860156 Msa0795820:CDS
GTTGAAGGACATCAAGGTGG+TGG 0.555707 5_3:+7859851 Msa0795820:CDS
TTGCCTTGTTTACATACTTG+AGG 0.556004 5_3:+7868183 Msa0795820:three_prime_UTR
GACTGCCACTGCAGATGTGA+AGG 0.563742 5_3:+7860761 Msa0795820:CDS
TCACACTCATCTGCAACAGC+AGG 0.565108 5_3:+7860078 Msa0795820:CDS
GCAGAAGGCTCTAGAGAAGG+AGG 0.565595 5_3:+7864924 Msa0795820:CDS
TTAGCAGTTGAAGGACATCA+AGG 0.567675 5_3:+7859845 Msa0795820:CDS
AGGTAGTGGAGAATTGGGAG+AGG 0.569247 5_3:-7858256 None:intergenic
ATAAGTTCATTCTTGCCCAA+TGG 0.570627 5_3:+7868462 Msa0795820:three_prime_UTR
TTGTGCAGGTTCAAGAAGCA+AGG 0.572071 5_3:+7866118 Msa0795820:intron
AGTTTAGTTTCTCCTGGACA+AGG 0.572083 5_3:-7867923 None:intergenic
CACAACCATCTGTAGCTGTA+GGG 0.573415 5_3:+7860715 Msa0795820:CDS
GGCGAGGGTTTAAGGGTGAA+AGG 0.578504 5_3:-7858202 None:intergenic
TTCCACCCTACAGCTACAGA+TGG 0.578527 5_3:-7860720 None:intergenic
ATGGTGACGGTCTCTTTAGA+GGG 0.579960 5_3:+7858704 Msa0795820:CDS
AGATGGAAGTTGGTGGTGGA+AGG 0.580738 5_3:+7862419 Msa0795820:CDS
CAGAGAAATTGTGAATGGCG+AGG 0.582893 5_3:-7858218 None:intergenic
ATTGAGATGGAAGTTGGTGG+TGG 0.583627 5_3:+7862415 Msa0795820:CDS
AGAGAAATTGTGAATGGCGA+GGG 0.585703 5_3:-7858217 None:intergenic
TTTGCGGATTTCTTCGTCGG+AGG 0.586012 5_3:-7858363 None:intergenic
GGTAGTGGAGAATTGGGAGA+GGG 0.586490 5_3:-7858255 None:intergenic
CAACATTGTCCTACTCTCCA+AGG 0.586546 5_3:+7858107 Msa0795820:five_prime_UTR
GTGCGCTGGTTGTATGTAGT+AGG 0.589823 5_3:+7862463 Msa0795820:CDS
CATTTGCAGGGCGTAACAGA+AGG 0.590996 5_3:-7868302 None:intergenic
CGTCGGAGGATTCGGGTGAG+AGG 0.591705 5_3:-7858349 None:intergenic
GAGATTTGAATTCTGTCGTG+GGG 0.593603 5_3:+7863393 Msa0795820:CDS
TATGTAGAGTACGCTCATGC+CGG 0.594747 5_3:+7867950 Msa0795820:CDS
AACGCTCCAGTAGCAAACAT+AGG 0.595428 5_3:-7864211 None:intergenic
CCGCAGTATTTAGATGGTGA+CGG 0.596124 5_3:+7858691 Msa0795820:CDS
ACGCTCCAGTAGCAAACATA+GGG 0.598281 5_3:-7864210 None:intergenic
GTGGCAGCATCTTTCATGAG+AGG 0.598579 5_3:-7858433 None:intergenic
TGATACCCCAGGGCATCCAC+AGG 0.599069 5_3:+7868110 Msa0795820:CDS
CAAATTAGCCAAAATCGTCC+CGG 0.603920 5_3:-7858662 None:intergenic
AACCATCTGTAGCTGTAGGG+TGG 0.613280 5_3:+7860718 Msa0795820:CDS
TAAGCAGAAGGCTCTAGAGA+AGG 0.614702 5_3:+7864921 Msa0795820:CDS
CCTTAAAAGGAATAAGCAGA+AGG 0.619877 5_3:+7864909 Msa0795820:CDS
TGAACAATTAGTGATACCCC+AGG 0.624180 5_3:+7868099 Msa0795820:CDS
AGGAACATCACACAAAATTG+TGG 0.626070 5_3:-7868406 None:intergenic
GATGATGCGATTGAAGGTAG+TGG 0.628517 5_3:-7858270 None:intergenic
CTCCAAGGAAGAGAAGAGAG+TGG 0.638400 5_3:+7858122 Msa0795820:five_prime_UTR
TGTGCAGGTTCAAGAAGCAA+GGG 0.640879 5_3:+7866119 Msa0795820:intron
TTACCTCAAGTATGTAAACA+AGG 0.641730 5_3:-7868186 None:intergenic
TACCGAGCTGATGTCTCGAA+AGG 0.642389 5_3:-7861028 None:intergenic
TAATTGGAGTGCAGACATCA+CGG 0.643892 5_3:+7859954 Msa0795820:CDS
AACAAGCAATTAGAAACGGG+TGG 0.644799 5_3:+7866195 Msa0795820:CDS
GAGTGGACCAAGATACCTTG+TGG 0.647070 5_3:+7858139 Msa0795820:five_prime_UTR
GTAAACAAGGCAAAACTGCA+GGG 0.654050 5_3:-7868173 None:intergenic
AAGTACCTTCACATCTGCAG+TGG 0.655070 5_3:-7860766 None:intergenic
ACTGTTAGATGGAATGCAAG+AGG 0.659226 5_3:+7868219 Msa0795820:three_prime_UTR
CAGAAGGCTCTAGAGAAGGA+GGG 0.666625 5_3:+7864925 Msa0795820:CDS
AAAATTGTGGTACAGCAGCA+GGG 0.669364 5_3:-7868393 None:intergenic
TCATGCCGGCAATCAACACA+AGG 0.679169 5_3:+7867964 Msa0795820:CDS
TATATCCTGTGGATGCCCTG+GGG 0.680955 5_3:-7868115 None:intergenic
GTCCTTTCGAGACATCAGCT+CGG 0.682396 5_3:+7861026 Msa0795820:CDS
TCCCAAACAAAACATCCACA+AGG 0.691678 5_3:-7858154 None:intergenic
AAGGGAACATGAGAAGATGG+TGG 0.692220 5_3:+7858624 Msa0795820:CDS
AGATTTGAATTCTGTCGTGG+GGG 0.694309 5_3:+7863394 Msa0795820:CDS
TCATTAACTAGAAAATTCAG+AGG 0.697331 5_3:-7866327 None:intergenic
GAACAATTAGTGATACCCCA+GGG 0.697876 5_3:+7868100 Msa0795820:CDS
GCAGTTGAAGGACATCAAGG+TGG 0.714956 5_3:+7859848 Msa0795820:CDS
TTGTTGATGCAGCTTCACGA+AGG 0.717990 5_3:+7867866 Msa0795820:intron
AACTCGTTGAAAATTCTCAG+TGG 0.720687 5_3:-7858452 None:intergenic
GCATTGGAGGAAGATTTGGG+AGG 0.723138 5_3:+7861083 Msa0795820:CDS
CCGTCACCATCTAAATACTG+CGG 0.736185 5_3:-7858691 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATATATATATATATA+TGG + chr5_3:7866484-7866503 Msa0795820:intron 0.0%
!!! TTTCTCTTAATAATTTTTAT+AGG - chr5_3:7859113-7859132 None:intergenic 10.0%
!!! AAACTTTTTATTTATAAAAG+TGG - chr5_3:7859604-7859623 None:intergenic 10.0%
!! GACAAATTAAAAATATAATA+TGG - chr5_3:7863168-7863187 None:intergenic 10.0%
!! CATGAATAAAAAATATTTAT+AGG - chr5_3:7864359-7864378 None:intergenic 10.0%
!! CAAATTAATTAAAAACTATA+TGG + chr5_3:7864455-7864474 Msa0795820:intron 10.0%
!!! TATTTTTTTTCATTCATTAT+AGG - chr5_3:7865148-7865167 None:intergenic 10.0%
!! TATATATATATATATAAGTC+AGG + chr5_3:7866548-7866567 Msa0795820:intron 10.0%
!!! TGATTTTTTTTTAATTACTT+TGG - chr5_3:7866905-7866924 None:intergenic 10.0%
!!! TTTTTTAAATAATTGAGGAA+GGG - chr5_3:7859628-7859647 None:intergenic 15.0%
!!! TTTTTTTAAATAATTGAGGA+AGG - chr5_3:7859629-7859648 None:intergenic 15.0%
!!! AAATTATATTTTAAGGAACT+TGG - chr5_3:7860542-7860561 None:intergenic 15.0%
!!! TACAACTTTTAATCAATATA+TGG - chr5_3:7860837-7860856 None:intergenic 15.0%
!! TTGATTAGAATTAAATTGAA+AGG + chr5_3:7861612-7861631 Msa0795820:intron 15.0%
!! TGATTAGAATTAAATTGAAA+GGG + chr5_3:7861613-7861632 Msa0795820:intron 15.0%
!! AAATTTGAAGATATTGATAA+AGG + chr5_3:7861803-7861822 Msa0795820:intron 15.0%
!!! TTTTAAATTAAACAAGAGTT+GGG + chr5_3:7862234-7862253 Msa0795820:intron 15.0%
!!! CTATCTAAAATAAAATTGTT+AGG - chr5_3:7863669-7863688 None:intergenic 15.0%
!!! CTAACAATTTTATTTTAGAT+AGG + chr5_3:7863667-7863686 Msa0795820:intron 15.0%
!!! TGCAATTATTTCTTTAATTT+TGG - chr5_3:7863723-7863742 None:intergenic 15.0%
!! CAAGTTTGATTATATTAAAA+TGG + chr5_3:7863746-7863765 Msa0795820:intron 15.0%
!! TCTAAATTAGCTAAATATTA+GGG - chr5_3:7864815-7864834 None:intergenic 15.0%
!! ATCTAAATTAGCTAAATATT+AGG - chr5_3:7864816-7864835 None:intergenic 15.0%
!! AATAAATAATGAAAAAGGAA+CGG + chr5_3:7865253-7865272 Msa0795820:intron 15.0%
!!! GGACATTTTATTTTATAATT+GGG + chr5_3:7865274-7865293 Msa0795820:intron 15.0%
!! GAAAGAAATATATAAACAAA+TGG + chr5_3:7865323-7865342 Msa0795820:intron 15.0%
!!! GTATGATTTATTAGTTTTAA+CGG - chr5_3:7866621-7866640 None:intergenic 15.0%
!! GTTAAAACTAATAAATCATA+CGG + chr5_3:7866620-7866639 Msa0795820:intron 15.0%
!! TCATTATAAAAATTGGATAT+TGG + chr5_3:7866643-7866662 Msa0795820:intron 15.0%
!! ATATATATATATATGGATCA+TGG + chr5_3:7867346-7867365 Msa0795820:intron 15.0%
!!! TTAAAATTGAAATTTTGAGA+TGG + chr5_3:7867413-7867432 Msa0795820:intron 15.0%
!!! CTAATTAAATTCTTTTAAAC+AGG + chr5_3:7868060-7868079 Msa0795820:intron 15.0%
!! TTAAAACCATTCTAACAAAA+AGG - chr5_3:7858971-7858990 None:intergenic 20.0%
!!! GTTTATCTTATAGTTTTTCT+AGG - chr5_3:7859212-7859231 None:intergenic 20.0%
!!! TTTTTATAGAAATATGTTCG+TGG + chr5_3:7859484-7859503 Msa0795820:intron 20.0%
!!! TTTTTAAATAATTGAGGAAG+GGG - chr5_3:7859627-7859646 None:intergenic 20.0%
!! AACATTCAAATAAAATCCTA+AGG - chr5_3:7859725-7859744 None:intergenic 20.0%
!! TTAGTATAGGAAAAGATAAA+AGG - chr5_3:7860975-7860994 None:intergenic 20.0%
!!! TACCTTCTTTTTTATCTTAA+TGG + chr5_3:7861292-7861311 Msa0795820:intron 20.0%
!! TACCATTAAGATAAAAAAGA+AGG - chr5_3:7861297-7861316 None:intergenic 20.0%
!!! ATTGCTGTAGATTTTTTTAA+AGG + chr5_3:7861336-7861355 Msa0795820:intron 20.0%
!!! AGATTTTTTTAAAGGTCAAT+AGG + chr5_3:7861344-7861363 Msa0795820:intron 20.0%
!!! GATTTTTTTAAAGGTCAATA+GGG + chr5_3:7861345-7861364 Msa0795820:intron 20.0%
!! AACTGCAAATATATAAAAGA+TGG + chr5_3:7861533-7861552 Msa0795820:intron 20.0%
!!! AAGATATTGATAAAGGTATT+AGG + chr5_3:7861810-7861829 Msa0795820:intron 20.0%
!! ATTAAACATGAAATTTAGAC+TGG + chr5_3:7862120-7862139 Msa0795820:intron 20.0%
!! CATTTCTAAATTCTAACTAT+TGG - chr5_3:7862151-7862170 None:intergenic 20.0%
!! TAGTTAGAATTTAGAAATGT+AGG + chr5_3:7862152-7862171 Msa0795820:intron 20.0%
!! AAAGATATATCATTTATCTC+TGG - chr5_3:7862217-7862236 None:intergenic 20.0%
!!! CTTTTAAATTAAACAAGAGT+TGG + chr5_3:7862233-7862252 Msa0795820:intron 20.0%
!!! ACTCATTGACATTAAATTTT+TGG + chr5_3:7862331-7862350 Msa0795820:intron 20.0%
!! AATCATCAAAAAGTTTATCT+GGG + chr5_3:7863073-7863092 Msa0795820:intron 20.0%
!!! TAAGAGCAAAAGTTATTTTT+TGG - chr5_3:7863117-7863136 None:intergenic 20.0%
!! ATATGGCTTAATTCAAAATT+TGG - chr5_3:7863151-7863170 None:intergenic 20.0%
!!! TTTTTAATTTGTCACATTGA+TGG + chr5_3:7863175-7863194 Msa0795820:intron 20.0%
!! TACAAGAAATCATTAACAAA+GGG - chr5_3:7863329-7863348 None:intergenic 20.0%
!! ATACAAGAAATCATTAACAA+AGG - chr5_3:7863330-7863349 None:intergenic 20.0%
!!! TTCAGATGTTTTATATATGA+TGG + chr5_3:7863504-7863523 Msa0795820:intron 20.0%
!!! AGTGTAGATTTTAACTTAAA+AGG + chr5_3:7863794-7863813 Msa0795820:intron 20.0%
!!! GTGTAGATTTTAACTTAAAA+GGG + chr5_3:7863795-7863814 Msa0795820:intron 20.0%
!!! TGTAGATTTTAACTTAAAAG+GGG + chr5_3:7863796-7863815 Msa0795820:intron 20.0%
!!! TTAGTATGTTTTACATAAGA+AGG + chr5_3:7863868-7863887 Msa0795820:intron 20.0%
!!! GTGTATATTTTAACAAAAGA+GGG + chr5_3:7863897-7863916 Msa0795820:intron 20.0%
!!! TGTATATTTTAACAAAAGAG+GGG + chr5_3:7863898-7863917 Msa0795820:intron 20.0%
!!! TATTTTTCAGCAATTACATT+AGG - chr5_3:7864058-7864077 None:intergenic 20.0%
!!! AGATATTTTGTGATAAAAAG+TGG - chr5_3:7864692-7864711 None:intergenic 20.0%
!!! TTTTTATCACAAAATATCTC+TGG + chr5_3:7864693-7864712 Msa0795820:intron 20.0%
!!! TTATTCCTTTTAAGGTAATA+CGG - chr5_3:7864904-7864923 None:intergenic 20.0%
!! TGATAACTACGTTAATAATT+TGG + chr5_3:7865087-7865106 Msa0795820:intron 20.0%
!! GATAACTACGTTAATAATTT+GGG + chr5_3:7865088-7865107 Msa0795820:intron 20.0%
!!! TTTTTTCATTCATTATAGGA+AGG - chr5_3:7865144-7865163 None:intergenic 20.0%
!! ATGAAAAAAAATACTGTATC+AGG + chr5_3:7865155-7865174 Msa0795820:intron 20.0%
!!! CGGACATTTTATTTTATAAT+TGG + chr5_3:7865273-7865292 Msa0795820:intron 20.0%
!! TTAAAAACCCTAAAAAACAT+AGG - chr5_3:7865496-7865515 None:intergenic 20.0%
!!! AATTTTCTAGTTAATGATTC+TGG + chr5_3:7866333-7866352 Msa0795820:CDS 20.0%
!!! GTTTAAAATATATCCACATA+AGG - chr5_3:7867206-7867225 None:intergenic 20.0%
!!! TACTTTTCTGTTTAATTTCT+TGG + chr5_3:7867467-7867486 Msa0795820:intron 20.0%
!! TGTTATGAAAAATATACAAG+TGG - chr5_3:7867696-7867715 None:intergenic 20.0%
!!! TTTTTACTGTTTAAGAAGTT+TGG + chr5_3:7868002-7868021 Msa0795820:intron 20.0%
!!! AAATTCTTTTAAACAGGTAT+TGG + chr5_3:7868066-7868085 Msa0795820:intron 20.0%
!! TAATATTTCTTTATATCCTG+TGG - chr5_3:7868129-7868148 None:intergenic 20.0%
!!! AATTATTTTGTACTGTTAGA+TGG + chr5_3:7868208-7868227 Msa0795820:three_prime_UTR 20.0%
!!! TTTCATTTAAGGTTTGTTAT+TGG + chr5_3:7868492-7868511 Msa0795820:three_prime_UTR 20.0%
! AGACAGGTTTATGATATTTA+TGG + chr5_3:7858511-7858530 Msa0795820:CDS 25.0%
! GGTTTATGATATTTATGGTA+TGG + chr5_3:7858516-7858535 Msa0795820:CDS 25.0%
! TATGATATTTATGGTATGGA+AGG + chr5_3:7858520-7858539 Msa0795820:CDS 25.0%
! TTAAGAGAAACTACTAAGAA+AGG + chr5_3:7859123-7859142 Msa0795820:intron 25.0%
! TTAATGAGTTGTAGATTAGA+CGG + chr5_3:7859154-7859173 Msa0795820:intron 25.0%
! TAAACTATTAAGAAAAGTCC+AGG + chr5_3:7859227-7859246 Msa0795820:intron 25.0%
! AAACTATTAAGAAAAGTCCA+GGG + chr5_3:7859228-7859247 Msa0795820:intron 25.0%
! TTGCAATAGTTTATCGATAT+TGG + chr5_3:7859381-7859400 Msa0795820:intron 25.0%
! AAAATTCAATCAAGAACACA+GGG - chr5_3:7859468-7859487 None:intergenic 25.0%
! AAAAATTCAATCAAGAACAC+AGG - chr5_3:7859469-7859488 None:intergenic 25.0%
!! CATTTTAAATTGTCTTAGGT+GGG - chr5_3:7859571-7859590 None:intergenic 25.0%
!! TGACCATTTTAAATTGTCTT+AGG - chr5_3:7859575-7859594 None:intergenic 25.0%
! TCAAATAAAATCCTAAGGAT+GGG - chr5_3:7859720-7859739 None:intergenic 25.0%
! TTCAAATAAAATCCTAAGGA+TGG - chr5_3:7859721-7859740 None:intergenic 25.0%
! AAATTGTACATAACTTTGTG+CGG + chr5_3:7860242-7860261 Msa0795820:intron 25.0%
!! GATCGATTTAATGATAACTA+TGG + chr5_3:7860290-7860309 Msa0795820:intron 25.0%
! TAAGCAACATACTAAATTCA+AGG + chr5_3:7860402-7860421 Msa0795820:intron 25.0%
! AAGCAACATACTAAATTCAA+GGG + chr5_3:7860403-7860422 Msa0795820:intron 25.0%
!! TGGTTTAGAATTTCTAAATG+TGG + chr5_3:7860449-7860468 Msa0795820:intron 25.0%
!! GGTTTAGAATTTCTAAATGT+GGG + chr5_3:7860450-7860469 Msa0795820:intron 25.0%
!! GTTTAGAATTTCTAAATGTG+GGG + chr5_3:7860451-7860470 Msa0795820:intron 25.0%
!! TTTAGAATTTCTAAATGTGG+GGG + chr5_3:7860452-7860471 Msa0795820:intron 25.0%
!! TAAGACCATTATTCTAAAGA+TGG - chr5_3:7860921-7860940 None:intergenic 25.0%
! GTTGAGAAAGAATTTAGTAT+AGG - chr5_3:7860988-7861007 None:intergenic 25.0%
!! AAAAAAGAAGGTATGAACAA+TGG - chr5_3:7861285-7861304 None:intergenic 25.0%
!!! ATTCCTAATCGATTTTCAAA+AGG - chr5_3:7861397-7861416 None:intergenic 25.0%
!!! TTTTGAAAATCGATTAGGAA+TGG + chr5_3:7861396-7861415 Msa0795820:intron 25.0%
! CTCTTATTATTCAATGTCAA+GGG - chr5_3:7861438-7861457 None:intergenic 25.0%
! CATAAAAACAAAAGAAACGA+TGG - chr5_3:7861488-7861507 None:intergenic 25.0%
!!! GTTTCTTTTGTTTTTATGCT+GGG + chr5_3:7861490-7861509 Msa0795820:intron 25.0%
!!! TTTCTTTTGTTTTTATGCTG+GGG + chr5_3:7861491-7861510 Msa0795820:intron 25.0%
! ATCTAAATTTCCCTCTTTAT+GGG + chr5_3:7861557-7861576 Msa0795820:intron 25.0%
! TTTATGGGAATCAAAATGAA+AGG + chr5_3:7861572-7861591 Msa0795820:intron 25.0%
! AGAATTAAATTGAAAGGGAA+AGG + chr5_3:7861618-7861637 Msa0795820:intron 25.0%
!! CATTGAACATTTTTCTATTG+AGG + chr5_3:7861691-7861710 Msa0795820:intron 25.0%
! TTGAAGTAAAATAGAGCATA+TGG + chr5_3:7861853-7861872 Msa0795820:intron 25.0%
! AAAAGTAAGATTGTGAATTG+AGG + chr5_3:7862000-7862019 Msa0795820:intron 25.0%
!!! GTTTGGGATATAAATTTTCT+TGG - chr5_3:7862181-7862200 None:intergenic 25.0%
! TAAACCGCTATAATTAATCA+CGG - chr5_3:7862555-7862574 None:intergenic 25.0%
! TTTCTAACACACTCTTTAAA+AGG + chr5_3:7862686-7862705 Msa0795820:intron 25.0%
!! TTCTAACACACTCTTTAAAA+GGG + chr5_3:7862687-7862706 Msa0795820:intron 25.0%
!!! CAGATAAACTTTTTGATGAT+TGG - chr5_3:7863074-7863093 None:intergenic 25.0%
! CAATCATCAAAAAGTTTATC+TGG + chr5_3:7863072-7863091 Msa0795820:intron 25.0%
! CTTAATTCAAAATTTGGATG+GGG - chr5_3:7863145-7863164 None:intergenic 25.0%
! GCTTAATTCAAAATTTGGAT+GGG - chr5_3:7863146-7863165 None:intergenic 25.0%
! AATCTTTAAATTTCCATAGG+TGG - chr5_3:7863218-7863237 None:intergenic 25.0%
! TGGAATCTTTAAATTTCCAT+AGG - chr5_3:7863221-7863240 None:intergenic 25.0%
!! ACCATTTATTTAACCTTTTC+AGG + chr5_3:7863360-7863379 Msa0795820:intron 25.0%
!! CCATTTATTTAACCTTTTCA+GGG + chr5_3:7863361-7863380 Msa0795820:intron 25.0%
! ATAAAAGTCAAATCCCAAAA+TGG - chr5_3:7863485-7863504 None:intergenic 25.0%
! TCATATCTCATTTGATCTAA+TGG - chr5_3:7863570-7863589 None:intergenic 25.0%
!!! GTTTTTCTTTTAATCGACTT+TGG + chr5_3:7863689-7863708 Msa0795820:intron 25.0%
!! ATGGACGTAAGATTTTATTA+AGG + chr5_3:7863765-7863784 Msa0795820:intron 25.0%
!! TGGACGTAAGATTTTATTAA+GGG + chr5_3:7863766-7863785 Msa0795820:intron 25.0%
!!! GGTGTATATTTTAACAAAAG+AGG + chr5_3:7863896-7863915 Msa0795820:intron 25.0%
! TGTAATTTAAGCAACTCTTA+GGG + chr5_3:7863928-7863947 Msa0795820:intron 25.0%
! AGAAAGGGAAATTTATTAAC+AGG - chr5_3:7864556-7864575 None:intergenic 25.0%
! GTACACTCAAAATTTAGAAA+GGG - chr5_3:7864571-7864590 None:intergenic 25.0%
! ATCAAGATTTCTGTAACTAA+TGG - chr5_3:7864667-7864686 None:intergenic 25.0%
! TTAAACCGTATTACCTTAAA+AGG + chr5_3:7864896-7864915 Msa0795820:CDS 25.0%
! AAAGATTAACACTTCCTAAA+TGG + chr5_3:7865349-7865368 Msa0795820:intron 25.0%
!!! ATAAACAGCCTATGTTTTTT+AGG + chr5_3:7865485-7865504 Msa0795820:intron 25.0%
!!! TAAACAGCCTATGTTTTTTA+GGG + chr5_3:7865486-7865505 Msa0795820:intron 25.0%
!! TTTTTACTAGAAACCCAAAT+GGG - chr5_3:7865519-7865538 None:intergenic 25.0%
!!! TTTTTTACTAGAAACCCAAA+TGG - chr5_3:7865520-7865539 None:intergenic 25.0%
! CTAGTAAAAAAGAAACATGT+TGG + chr5_3:7865529-7865548 Msa0795820:intron 25.0%
!!! TTTTTAGTTTTTTTCCGCTA+TGG + chr5_3:7865601-7865620 Msa0795820:intron 25.0%
! TACCTAGATATGAAATGAAA+GGG - chr5_3:7865780-7865799 None:intergenic 25.0%
! ATACCTAGATATGAAATGAA+AGG - chr5_3:7865781-7865800 None:intergenic 25.0%
! TACAACAAAATGTAGCTAAT+AGG + chr5_3:7866166-7866185 Msa0795820:CDS 25.0%
! AAGAAACAAGCAATTAGAAA+CGG + chr5_3:7866191-7866210 Msa0795820:CDS 25.0%
! TCATTAACTAGAAAATTCAG+AGG - chr5_3:7866330-7866349 None:intergenic 25.0%
! CATACGGTCATTATAAAAAT+TGG + chr5_3:7866636-7866655 Msa0795820:intron 25.0%
! AAAAATTGGATATTGGAACA+CGG + chr5_3:7866650-7866669 Msa0795820:intron 25.0%
! CAATGAATATTCATAAGTGA+TGG - chr5_3:7866782-7866801 None:intergenic 25.0%
! CATCACTTATGAATATTCAT+TGG + chr5_3:7866780-7866799 Msa0795820:intron 25.0%
!!! GAAAAATTTGTTGTCACATT+AGG - chr5_3:7866842-7866861 None:intergenic 25.0%
!! TGTGACAACAAATTTTTCTA+TGG + chr5_3:7866844-7866863 Msa0795820:intron 25.0%
! ATGATCGTAGAAAATTGTAT+GGG + chr5_3:7866960-7866979 Msa0795820:intron 25.0%
! ACACGATCGATTAAATTTAA+CGG + chr5_3:7867227-7867246 Msa0795820:intron 25.0%
! TAAATTTAACGGTTGAGATT+TGG + chr5_3:7867238-7867257 Msa0795820:intron 25.0%
! TATATATATGGATCATGGAA+TGG + chr5_3:7867351-7867370 Msa0795820:intron 25.0%
! AGTAACTGAAAGTTAAGTAT+AGG + chr5_3:7867440-7867459 Msa0795820:intron 25.0%
! GTAACTGAAAGTTAAGTATA+GGG + chr5_3:7867441-7867460 Msa0795820:intron 25.0%
!!! AGATTTATGTTCTAAAGATG+TGG + chr5_3:7867530-7867549 Msa0795820:intron 25.0%
! CCTCAGAAATATCATTAAAT+AGG - chr5_3:7867784-7867803 None:intergenic 25.0%
!! CCTATTTAATGATATTTCTG+AGG + chr5_3:7867781-7867800 Msa0795820:intron 25.0%
!!! ATTTTGGTGAAGTTACAATA+TGG - chr5_3:7867807-7867826 None:intergenic 25.0%
!! ACTTCACCAAAATTAAGTTT+TGG + chr5_3:7867814-7867833 Msa0795820:intron 25.0%
!! CTTCACCAAAATTAAGTTTT+GGG + chr5_3:7867815-7867834 Msa0795820:intron 25.0%
! AAAAAATTAAAGATACCCAC+TGG - chr5_3:7868269-7868288 None:intergenic 25.0%
!! ATGTTCCTTTTATTGTTCAT+TGG + chr5_3:7868421-7868440 Msa0795820:three_prime_UTR 25.0%
! AAGAATGAACTTATATGGTT+GGG - chr5_3:7868456-7868475 None:intergenic 25.0%
! AAATGAAAATTACAGCCATT+GGG - chr5_3:7868480-7868499 None:intergenic 25.0%
! TAAATGAAAATTACAGCCAT+TGG - chr5_3:7868481-7868500 None:intergenic 25.0%
!! ATGGCTGTAATTTTCATTTA+AGG + chr5_3:7868481-7868500 Msa0795820:three_prime_UTR 25.0%
! TTTTGCAGAGAAATTGTGAA+TGG - chr5_3:7858226-7858245 None:intergenic 30.0%
TCATAAACCTGTCTCTTATT+CGG - chr5_3:7858505-7858524 None:intergenic 30.0%
GATAAGCTAGTGTATTGAAA+TGG + chr5_3:7858853-7858872 Msa0795820:intron 30.0%
! TGCATACCTTTTTGTTAGAA+TGG + chr5_3:7858962-7858981 Msa0795820:intron 30.0%
GATAGTAATCAAATCACTAG+AGG + chr5_3:7859176-7859195 Msa0795820:intron 30.0%
ATGGATATGATAGAACATTG+CGG + chr5_3:7859266-7859285 Msa0795820:intron 30.0%
ATCGATAAACTATTGCAACA+AGG - chr5_3:7859379-7859398 None:intergenic 30.0%
! CCATTTTAAATTGTCTTAGG+TGG - chr5_3:7859572-7859591 None:intergenic 30.0%
CCACCTAAGACAATTTAAAA+TGG + chr5_3:7859569-7859588 Msa0795820:intron 30.0%
GAAGCAATTATTTAACTGTC+AGG - chr5_3:7859667-7859686 None:intergenic 30.0%
TTGTCAAAACGAAATGTTGT+TGG + chr5_3:7859809-7859828 Msa0795820:CDS 30.0%
TGTCAAAACGAAATGTTGTT+GGG + chr5_3:7859810-7859829 Msa0795820:CDS 30.0%
ATTAAGTCATCAACTTTCTG+AGG + chr5_3:7859889-7859908 Msa0795820:CDS 30.0%
ATAGAATTTATTGCTTCAGC+CGG + chr5_3:7859920-7859939 Msa0795820:CDS 30.0%
GAAACACATAAATCATCACT+AGG - chr5_3:7860030-7860049 None:intergenic 30.0%
! TTAACAATGTCTTTGAGAGA+TGG + chr5_3:7860102-7860121 Msa0795820:CDS 30.0%
TTGCTTATACAAAGTAATCC+TGG - chr5_3:7860389-7860408 None:intergenic 30.0%
TACTAAATTCAAGGGAACAA+AGG + chr5_3:7860411-7860430 Msa0795820:intron 30.0%
GTCAACAAAGTTTGTATGTT+TGG + chr5_3:7860504-7860523 Msa0795820:intron 30.0%
! CTGGCGCAAATTATATTTTA+AGG - chr5_3:7860549-7860568 None:intergenic 30.0%
! AATATAATTTGCGCCAGAAT+TGG + chr5_3:7860552-7860571 Msa0795820:intron 30.0%
ATTTCAGATACAACTCATGT+TGG + chr5_3:7860689-7860708 Msa0795820:intron 30.0%
TTTCAGATACAACTCATGTT+GGG + chr5_3:7860690-7860709 Msa0795820:intron 30.0%
ATATATGGTCGTAAAATGTC+CGG - chr5_3:7860822-7860841 None:intergenic 30.0%
!! TGCTTCCATCTTTAGAATAA+TGG + chr5_3:7860913-7860932 Msa0795820:intron 30.0%
! CGATTTTCTTCTAAATCTCA+TGG + chr5_3:7861058-7861077 Msa0795820:CDS 30.0%
GGAAACAGAGTAAAATTAGT+TGG - chr5_3:7861264-7861283 None:intergenic 30.0%
CCTCTTATTATTCAATGTCA+AGG - chr5_3:7861439-7861458 None:intergenic 30.0%
CCTTGACATTGAATAATAAG+AGG + chr5_3:7861436-7861455 Msa0795820:intron 30.0%
!!! CGTTTCTTTTGTTTTTATGC+TGG + chr5_3:7861489-7861508 Msa0795820:intron 30.0%
CATCTAAATTTCCCTCTTTA+TGG + chr5_3:7861556-7861575 Msa0795820:intron 30.0%
!!! CATTTTGATTCCCATAAAGA+GGG - chr5_3:7861570-7861589 None:intergenic 30.0%
!!! TCATTTTGATTCCCATAAAG+AGG - chr5_3:7861571-7861590 None:intergenic 30.0%
CATTCAGCATATATAAGAGA+TGG + chr5_3:7861719-7861738 Msa0795820:intron 30.0%
! ATATATAAGAGATGGTGTCA+TGG + chr5_3:7861727-7861746 Msa0795820:intron 30.0%
!!! TAACATTTTAAAACGCCTTG+TGG - chr5_3:7861940-7861959 None:intergenic 30.0%
! TTAAATACTTGATAGCCTGT+AGG + chr5_3:7862278-7862297 Msa0795820:intron 30.0%
AAAGACAAGAACGATAAACA+TGG - chr5_3:7862528-7862547 None:intergenic 30.0%
GTTTCCGTGATTAATTATAG+CGG + chr5_3:7862548-7862567 Msa0795820:intron 30.0%
GTGATTAATTATAGCGGTTT+AGG + chr5_3:7862554-7862573 Msa0795820:intron 30.0%
!!! TTACCCTGTTTTTTACACAT+GGG + chr5_3:7862786-7862805 Msa0795820:intron 30.0%
! TCAAAGAGTGTGTTAGAAAA+GGG - chr5_3:7862871-7862890 None:intergenic 30.0%
! ATCAAAGAGTGTGTTAGAAA+AGG - chr5_3:7862872-7862891 None:intergenic 30.0%
TTTCTAACACACTCTTTGAT+TGG + chr5_3:7862872-7862891 Msa0795820:intron 30.0%
TAGGTCCCACAATATTTATA+CGG - chr5_3:7862935-7862954 None:intergenic 30.0%
!!! AACTGCATAGTATTTTAGCA+GGG - chr5_3:7863036-7863055 None:intergenic 30.0%
!!! AAACTGCATAGTATTTTAGC+AGG - chr5_3:7863037-7863056 None:intergenic 30.0%
GGCTTAATTCAAAATTTGGA+TGG - chr5_3:7863147-7863166 None:intergenic 30.0%
CCCTGAAAAGGTTAAATAAA+TGG - chr5_3:7863364-7863383 None:intergenic 30.0%
ATCTCATTTGATCTAATGGT+GGG - chr5_3:7863566-7863585 None:intergenic 30.0%
TATCTCATTTGATCTAATGG+TGG - chr5_3:7863567-7863586 None:intergenic 30.0%
TCTCACATACACAAGTAAAA+TGG - chr5_3:7863642-7863661 None:intergenic 30.0%
! CGTAAGATTTTATTAAGGGA+TGG + chr5_3:7863770-7863789 Msa0795820:intron 30.0%
!!! AGATTTTAACTTAAAAGGGG+AGG + chr5_3:7863799-7863818 Msa0795820:intron 30.0%
!!! GATTTTAACTTAAAAGGGGA+GGG + chr5_3:7863800-7863819 Msa0795820:intron 30.0%
!!! ATTTTAACTTAAAAGGGGAG+GGG + chr5_3:7863801-7863820 Msa0795820:intron 30.0%
ATGTAATTCAAACTTCTCTC+AGG + chr5_3:7863825-7863844 Msa0795820:intron 30.0%
TGTAATTCAAACTTCTCTCA+GGG + chr5_3:7863826-7863845 Msa0795820:intron 30.0%
! TGTTTTACATAAGAAGGAAG+AGG + chr5_3:7863874-7863893 Msa0795820:intron 30.0%
! GTTTTACATAAGAAGGAAGA+GGG + chr5_3:7863875-7863894 Msa0795820:intron 30.0%
!!! ATATTTTAACAAAAGAGGGG+AGG + chr5_3:7863901-7863920 Msa0795820:intron 30.0%
!!! TATTTTAACAAAAGAGGGGA+GGG + chr5_3:7863902-7863921 Msa0795820:intron 30.0%
GTGTAATTTAAGCAACTCTT+AGG + chr5_3:7863927-7863946 Msa0795820:intron 30.0%
AGCAATTACATTAGGTTTCA+AGG - chr5_3:7864050-7864069 None:intergenic 30.0%
! ATCGTTTTACTTTGTTCTGA+AGG + chr5_3:7864246-7864265 Msa0795820:CDS 30.0%
!! TAGCACTGACAATACTTAAA+CGG - chr5_3:7864313-7864332 None:intergenic 30.0%
TGCTGAATAATGATGACTTA+CGG - chr5_3:7864398-7864417 None:intergenic 30.0%
TAAGTCATCATTATTCAGCA+GGG + chr5_3:7864398-7864417 Msa0795820:intron 30.0%
GGGAAATTTATTAACAGGTA+TGG - chr5_3:7864551-7864570 None:intergenic 30.0%
GGTACACTCAAAATTTAGAA+AGG - chr5_3:7864572-7864591 None:intergenic 30.0%
AGTTATCTTGATTCTTCGTA+TGG - chr5_3:7864729-7864748 None:intergenic 30.0%
! GTTTGATTTATTGAACAGCT+TGG + chr5_3:7864781-7864800 Msa0795820:intron 30.0%
AAAAACTTCTACTCAGGTAT+GGG + chr5_3:7864948-7864967 Msa0795820:intron 30.0%
TTATGGTATTAACTGAGTAG+TGG + chr5_3:7864977-7864996 Msa0795820:intron 30.0%
! GTAAGATGGTCTATATTTTC+TGG + chr5_3:7865059-7865078 Msa0795820:intron 30.0%
!! TTTAGGGTTTTTAACCCATT+TGG + chr5_3:7865502-7865521 Msa0795820:intron 30.0%
! TTAGGGTTTTTAACCCATTT+GGG + chr5_3:7865503-7865522 Msa0795820:intron 30.0%
AAACAGAGAAAACTGAGATT+GGG - chr5_3:7865580-7865599 None:intergenic 30.0%
AAAACAGAGAAAACTGAGAT+TGG - chr5_3:7865581-7865600 None:intergenic 30.0%
AAAATCTTACTGTCCAACTA+TGG - chr5_3:7865674-7865693 None:intergenic 30.0%
TAAAGATTCACCATCCAAAT+AGG - chr5_3:7865721-7865740 None:intergenic 30.0%
ACCTAGATATGAAATGAAAG+GGG - chr5_3:7865779-7865798 None:intergenic 30.0%
! GACATGTAACTTCTAAAAAG+TGG - chr5_3:7866019-7866038 None:intergenic 30.0%
! AGACATATCAGATCTGTTTT+TGG + chr5_3:7866048-7866067 Msa0795820:intron 30.0%
AGAAACAAGCAATTAGAAAC+GGG + chr5_3:7866192-7866211 Msa0795820:CDS 30.0%
AACAACTTGTATTCGTCAAA+TGG + chr5_3:7866261-7866280 Msa0795820:CDS 30.0%
!!! ACAAGTTTTGAATCTACTTC+AGG + chr5_3:7866285-7866304 Msa0795820:CDS 30.0%
TAATGATTCTGGTCAACTTA+AGG + chr5_3:7866344-7866363 Msa0795820:CDS 30.0%
!! TAACTTTTTGAGAGAAAGCA+AGG - chr5_3:7866377-7866396 None:intergenic 30.0%
!!! TAGTTTTAACGGTTGAGATT+TGG - chr5_3:7866610-7866629 None:intergenic 30.0%
ATCGATGACTAAGAACATTT+AGG - chr5_3:7866813-7866832 None:intergenic 30.0%
!! AAATTTGTTGTCACATTAGG+AGG - chr5_3:7866839-7866858 None:intergenic 30.0%
ATGAAAAGAAACGCTAAAAG+GGG - chr5_3:7866942-7866961 None:intergenic 30.0%
CATGAAAAGAAACGCTAAAA+GGG - chr5_3:7866943-7866962 None:intergenic 30.0%
TCATGAAAAGAAACGCTAAA+AGG - chr5_3:7866944-7866963 None:intergenic 30.0%
CATGATCGTAGAAAATTGTA+TGG + chr5_3:7866959-7866978 Msa0795820:intron 30.0%
GTTAAATTTAATCGATCGTG+TGG - chr5_3:7867228-7867247 None:intergenic 30.0%
TTGGACTGACATTAAATTTC+TGG + chr5_3:7867486-7867505 Msa0795820:intron 30.0%
TCTCTTTGACGTAAAACTTA+AGG - chr5_3:7867513-7867532 None:intergenic 30.0%
CAGAGTTGAGTTTAATGAAT+TGG - chr5_3:7867596-7867615 None:intergenic 30.0%
GATGCAAAAACTTACTTGAA+AGG + chr5_3:7867662-7867681 Msa0795820:intron 30.0%
CTACTACTTGTGTGAATTAA+AGG + chr5_3:7867728-7867747 Msa0795820:intron 30.0%
AACAGAACTTCCATTATTTC+AGG - chr5_3:7867847-7867866 None:intergenic 30.0%
TGTAAAGAAATCAGGAATCA+TGG + chr5_3:7867889-7867908 Msa0795820:CDS 30.0%
GTAAAGAAATCAGGAATCAT+GGG + chr5_3:7867890-7867909 Msa0795820:CDS 30.0%
!!! TCTTTTAAACAGGTATTGGT+TGG + chr5_3:7868070-7868089 Msa0795820:intron 30.0%
TTACCTCAAGTATGTAAACA+AGG - chr5_3:7868189-7868208 None:intergenic 30.0%
TGCAACCAATGAACAATAAA+AGG - chr5_3:7868429-7868448 None:intergenic 30.0%
CAAGAATGAACTTATATGGT+TGG - chr5_3:7868457-7868476 None:intergenic 30.0%
GAACTGATACAAAAATGTCA+CGG - chr5_3:7868567-7868586 None:intergenic 30.0%
! AAAACATCCACAAGGTATCT+TGG - chr5_3:7858149-7858168 None:intergenic 35.0%
!! TACCTTGTGGATGTTTTGTT+TGG + chr5_3:7858152-7858171 Msa0795820:five_prime_UTR 35.0%
!!! ACCTTGTGGATGTTTTGTTT+GGG + chr5_3:7858153-7858172 Msa0795820:five_prime_UTR 35.0%
!! ATTGAAGGTAGTGGAGAATT+GGG - chr5_3:7858264-7858283 None:intergenic 35.0%
!!! CAGAGTTTTGTTCCATCATT+GGG - chr5_3:7858295-7858314 None:intergenic 35.0%
!!! TCAGAGTTTTGTTCCATCAT+TGG - chr5_3:7858296-7858315 None:intergenic 35.0%
! CATCTTTCATGAGAGGATTT+TGG - chr5_3:7858429-7858448 None:intergenic 35.0%
AACTCGTTGAAAATTCTCAG+TGG - chr5_3:7858455-7858474 None:intergenic 35.0%
!! TTGAAATCTGGTTTGGAACT+TGG + chr5_3:7858544-7858563 Msa0795820:CDS 35.0%
TCAGTTCGCTTATCAACTAT+CGG - chr5_3:7858781-7858800 None:intergenic 35.0%
! TTGATAAGCTAGCTTGTAGT+TGG + chr5_3:7858825-7858844 Msa0795820:intron 35.0%
TGTATTGAAATGGCAGTGTT+TGG + chr5_3:7858863-7858882 Msa0795820:intron 35.0%
GATAGTGAATGAGCTTATAG+CGG + chr5_3:7859032-7859051 Msa0795820:intron 35.0%
ATATCCAGTTCATTAATCCC+TGG - chr5_3:7859248-7859267 None:intergenic 35.0%
AGGGATTAATGAACTGGATA+TGG + chr5_3:7859247-7859266 Msa0795820:intron 35.0%
! AAGCTTTATCCCATTAAGTG+GGG - chr5_3:7859315-7859334 None:intergenic 35.0%
! CAAGCTTTATCCCATTAAGT+GGG - chr5_3:7859316-7859335 None:intergenic 35.0%
! TCAAGCTTTATCCCATTAAG+TGG - chr5_3:7859317-7859336 None:intergenic 35.0%
AGTGTTAATGTACGCAATGA+TGG + chr5_3:7859410-7859429 Msa0795820:intron 35.0%
AAACGAAATGTTGTTGGGAT+TGG + chr5_3:7859815-7859834 Msa0795820:CDS 35.0%
TCCAATTAGTGAACGTAAAC+CGG - chr5_3:7859942-7859961 None:intergenic 35.0%
CGTTGAATCTTTCTAATGCA+TGG + chr5_3:7860127-7860146 Msa0795820:CDS 35.0%
AGATGAGAAAGAAAAGTCCA+AGG - chr5_3:7860201-7860220 None:intergenic 35.0%
AAAATAATGTCCACTGCATC+TGG + chr5_3:7860348-7860367 Msa0795820:intron 35.0%
!! ACAAAGTAATCCTGGTTTTC+TGG - chr5_3:7860381-7860400 None:intergenic 35.0%
ACACTCATCTATTACAAGGT+CGG - chr5_3:7860486-7860505 None:intergenic 35.0%
GTTGACACTCATCTATTACA+AGG - chr5_3:7860490-7860509 None:intergenic 35.0%
ACACTTATATGAGCCAATTC+TGG - chr5_3:7860568-7860587 None:intergenic 35.0%
! GAATTGGCTCATATAAGTGT+TGG + chr5_3:7860568-7860587 Msa0795820:intron 35.0%
! AACTCACCAATGCTTTGAAT+TGG - chr5_3:7860594-7860613 None:intergenic 35.0%
!! ATTCAAAGCATTGGTGAGTT+TGG + chr5_3:7860594-7860613 Msa0795820:intron 35.0%
AATCTGTTTCATAATCCCTG+AGG - chr5_3:7860630-7860649 None:intergenic 35.0%
CAGGGATTATGAAACAGATT+TGG + chr5_3:7860630-7860649 Msa0795820:intron 35.0%
GCAAAATCAGTCATTTGTAC+CGG + chr5_3:7860800-7860819 Msa0795820:intron 35.0%
AAAATCTAAGTACGACGGTA+TGG - chr5_3:7861142-7861161 None:intergenic 35.0%
! ATACCGTCGTACTTAGATTT+TGG + chr5_3:7861141-7861160 Msa0795820:intron 35.0%
TCACCAAAATCTAAGTACGA+CGG - chr5_3:7861147-7861166 None:intergenic 35.0%
TTGCAATGTCACTGTATTGT+TGG + chr5_3:7861175-7861194 Msa0795820:intron 35.0%
!! CCTAATCGATTTTCAAAAGG+AGG - chr5_3:7861394-7861413 None:intergenic 35.0%
!! CCTCCTTTTGAAAATCGATT+AGG + chr5_3:7861391-7861410 Msa0795820:intron 35.0%
ACAAAAGAAACGATGGTGTA+TGG - chr5_3:7861481-7861500 None:intergenic 35.0%
AGAGAGAAATTTCAGTGTAG+AGG + chr5_3:7861891-7861910 Msa0795820:intron 35.0%
AGATGATACAGTCTCATCTT+AGG + chr5_3:7862041-7862060 Msa0795820:intron 35.0%
ACATGAAATTTAGACTGGAC+AGG + chr5_3:7862125-7862144 Msa0795820:intron 35.0%
!! TGGATCTCTCTTTAAGGTTT+GGG - chr5_3:7862197-7862216 None:intergenic 35.0%
TATCTCTGGATCTCTCTTTA+AGG - chr5_3:7862203-7862222 None:intergenic 35.0%
GGAAGAGCTAAAAGTTCAAA+TGG - chr5_3:7862395-7862414 None:intergenic 35.0%
!!! TTTTAGCTCTTCCATTGAGA+TGG + chr5_3:7862402-7862421 Msa0795820:intron 35.0%
AATTATAGCGGTTTAGGCTT+AGG + chr5_3:7862560-7862579 Msa0795820:intron 35.0%
ATTATAGCGGTTTAGGCTTA+GGG + chr5_3:7862561-7862580 Msa0795820:intron 35.0%
CATGTGTAAAAAACAGGGTA+AGG - chr5_3:7862787-7862806 None:intergenic 35.0%
!!! CTTACCCTGTTTTTTACACA+TGG + chr5_3:7862785-7862804 Msa0795820:intron 35.0%
!!! TACCCTGTTTTTTACACATG+GGG + chr5_3:7862787-7862806 Msa0795820:intron 35.0%
! AAAGAGTGTGTTAGAAAAGG+GGG - chr5_3:7862869-7862888 None:intergenic 35.0%
! CAAAGAGTGTGTTAGAAAAG+GGG - chr5_3:7862870-7862889 None:intergenic 35.0%
TTGTTTCCACTGAATCATGT+TGG + chr5_3:7862907-7862926 Msa0795820:intron 35.0%
TTGGACCCGTATAAATATTG+TGG + chr5_3:7862926-7862945 Msa0795820:intron 35.0%
TGGACCCGTATAAATATTGT+GGG + chr5_3:7862927-7862946 Msa0795820:intron 35.0%
AGGTCCCACAATATTTATAC+GGG - chr5_3:7862934-7862953 None:intergenic 35.0%
TCTTTAGTATGGTGAGGAAA+AGG - chr5_3:7862976-7862995 None:intergenic 35.0%
! CAAAAAGTTTATCTGGGATG+TGG + chr5_3:7863079-7863098 Msa0795820:intron 35.0%
AAATTTCCATAGGTGGAAAC+TGG - chr5_3:7863211-7863230 None:intergenic 35.0%
GTAAAGAAGACTCTTCTTAC+AGG - chr5_3:7863436-7863455 None:intergenic 35.0%
! ATAGATGCTAGACACCATTT+TGG + chr5_3:7863468-7863487 Msa0795820:intron 35.0%
! TAGATGCTAGACACCATTTT+GGG + chr5_3:7863469-7863488 Msa0795820:intron 35.0%
!! GATATGACTTGTTGATCCAA+TGG + chr5_3:7863588-7863607 Msa0795820:intron 35.0%
!!! TTTTAACTTAAAAGGGGAGG+GGG + chr5_3:7863802-7863821 Msa0795820:intron 35.0%
GTAATTCAAACTTCTCTCAG+GGG + chr5_3:7863827-7863846 Msa0795820:intron 35.0%
TTCACAAAGGAAGCTAAACA+GGG - chr5_3:7864010-7864029 None:intergenic 35.0%
TTAGCTTCCTTTGTGAACTT+CGG + chr5_3:7864013-7864032 Msa0795820:intron 35.0%
AGAACAAAGTAAAACGATGC+TGG - chr5_3:7864244-7864263 None:intergenic 35.0%
ACTTAAACGGTTCAACAAGT+AGG - chr5_3:7864300-7864319 None:intergenic 35.0%
! TAAGTATTGTCAGTGCTATC+TGG + chr5_3:7864315-7864334 Msa0795820:intron 35.0%
GTAAGTCATCATTATTCAGC+AGG + chr5_3:7864397-7864416 Msa0795820:intron 35.0%
! TTATTCAGCAGGGTGAATTT+TGG + chr5_3:7864408-7864427 Msa0795820:intron 35.0%
!!! TGCGTGTTATTTTGTTCCAA+TGG - chr5_3:7864497-7864516 None:intergenic 35.0%
!!! TGTACCTTTTCTAGTTCACA+AGG + chr5_3:7864586-7864605 Msa0795820:intron 35.0%
ACAACCTTGTGAACTAGAAA+AGG - chr5_3:7864593-7864612 None:intergenic 35.0%
! CCTTCTGCTTATTCCTTTTA+AGG - chr5_3:7864912-7864931 None:intergenic 35.0%
CCTTAAAAGGAATAAGCAGA+AGG + chr5_3:7864909-7864928 Msa0795820:CDS 35.0%
GAAAAACTTCTACTCAGGTA+TGG + chr5_3:7864947-7864966 Msa0795820:intron 35.0%
! TCAGGTATGGGTGATTTTTA+TGG + chr5_3:7864960-7864979 Msa0795820:intron 35.0%
ATTAACTGAGTAGTGGTGTT+AGG + chr5_3:7864984-7865003 Msa0795820:intron 35.0%
!! TACTTGTGTGTTGTTGTTTC+TGG + chr5_3:7865013-7865032 Msa0795820:intron 35.0%
TGTACTCTTCTCATGTAAGA+TGG + chr5_3:7865045-7865064 Msa0795820:intron 35.0%
TACTAGTCAATGCATGATAC+AGG + chr5_3:7865114-7865133 Msa0795820:intron 35.0%
GATTAACACTTCCTAAATGG+TGG + chr5_3:7865352-7865371 Msa0795820:intron 35.0%
AAAAAAGAAACATGTTGGCC+TGG + chr5_3:7865534-7865553 Msa0795820:intron 35.0%
! AAAAAGAAACATGTTGGCCT+GGG + chr5_3:7865535-7865554 Msa0795820:intron 35.0%
!!! GTAGCATATTGGTTTTCACA+TGG - chr5_3:7865649-7865668 None:intergenic 35.0%
TCACAAGTTCAATGCCTATT+TGG + chr5_3:7865704-7865723 Msa0795820:intron 35.0%
AAGTTCAATGCCTATTTGGA+TGG + chr5_3:7865708-7865727 Msa0795820:intron 35.0%
! ATTTTCAATTGTACAGCCAG+TGG + chr5_3:7865744-7865763 Msa0795820:intron 35.0%
TGAAATGAAAGGGGAACTAA+AGG - chr5_3:7865770-7865789 None:intergenic 35.0%
TCCCCTTTCATTTCATATCT+AGG + chr5_3:7865775-7865794 Msa0795820:intron 35.0%
!! AAGAACTAAAAGGAGGCATT+TGG - chr5_3:7865848-7865867 None:intergenic 35.0%
!!! AAATGCCTCCTTTTAGTTCT+TGG + chr5_3:7865847-7865866 Msa0795820:intron 35.0%
TATCACAGCCAAGAACTAAA+AGG - chr5_3:7865858-7865877 None:intergenic 35.0%
CATTTGTAAGCCTCATGATT+AGG - chr5_3:7865912-7865931 None:intergenic 35.0%
AACTTGTAAGCCTCAAGATT+AGG - chr5_3:7865954-7865973 None:intergenic 35.0%
CAGATCTGATATGTCTTCTA+TGG - chr5_3:7866044-7866063 None:intergenic 35.0%
!! GTTGTTATGAAAGCGCTATA+TGG + chr5_3:7866222-7866241 Msa0795820:CDS 35.0%
ATTCTGGTCAACTTAAGGTA+TGG + chr5_3:7866349-7866368 Msa0795820:intron 35.0%
TAAGTCTAAAGACTTACACC+TGG - chr5_3:7866585-7866604 None:intergenic 35.0%
AAAAAACTACGATGAGGAAG+GGG - chr5_3:7866686-7866705 None:intergenic 35.0%
GAAAAAACTACGATGAGGAA+GGG - chr5_3:7866687-7866706 None:intergenic 35.0%
AGAAAAAACTACGATGAGGA+AGG - chr5_3:7866688-7866707 None:intergenic 35.0%
TTGGAGAAAAAACTACGATG+AGG - chr5_3:7866692-7866711 None:intergenic 35.0%
GGAATCACAAGTTTCATTGT+TGG - chr5_3:7866711-7866730 None:intergenic 35.0%
!! TGAGATTGTTGATGACAGAA+TGG - chr5_3:7866753-7866772 None:intergenic 35.0%
TGCTGCAAACTCCTTTAATT+AGG + chr5_3:7867381-7867400 Msa0795820:intron 35.0%
ACTCCTTTAATTAGGCATGA+TGG + chr5_3:7867389-7867408 Msa0795820:intron 35.0%
CTCCTTTAATTAGGCATGAT+GGG + chr5_3:7867390-7867409 Msa0795820:intron 35.0%
AACCCATCATGCCTAATTAA+AGG - chr5_3:7867395-7867414 None:intergenic 35.0%
! TTTTTGCATCTTCGCGATAA+AGG - chr5_3:7867652-7867671 None:intergenic 35.0%
! GTGCTCCCAAAACTTAATTT+TGG - chr5_3:7867823-7867842 None:intergenic 35.0%
! TACAACAGTTTAGTTTCTCC+TGG - chr5_3:7867932-7867951 None:intergenic 35.0%
!! TAATACCTTGTGTTGATTGC+CGG - chr5_3:7867972-7867991 None:intergenic 35.0%
! GAGTATAAACCTTTTGCATC+TGG + chr5_3:7868024-7868043 Msa0795820:intron 35.0%
! ATAAACCTTTTGCATCTGGT+TGG + chr5_3:7868028-7868047 Msa0795820:intron 35.0%
!! TTGCCTTGTTTACATACTTG+AGG + chr5_3:7868183-7868202 Msa0795820:three_prime_UTR 35.0%
! ACCTTCAAGCTACAATTTTC+AGG + chr5_3:7868243-7868262 Msa0795820:three_prime_UTR 35.0%
! CCCTTATTTCATCATTTGCA+GGG - chr5_3:7868317-7868336 None:intergenic 35.0%
CCCTGCAAATGATGAAATAA+GGG + chr5_3:7868314-7868333 Msa0795820:three_prime_UTR 35.0%
!!! TGATGAAATAAGGGCGTTTT+AGG + chr5_3:7868323-7868342 Msa0795820:three_prime_UTR 35.0%
AGGAACATCACACAAAATTG+TGG - chr5_3:7868409-7868428 None:intergenic 35.0%
TGGGCAAGAATGAACTTATA+TGG - chr5_3:7868461-7868480 None:intergenic 35.0%
ATAAGTTCATTCTTGCCCAA+TGG + chr5_3:7868462-7868481 Msa0795820:three_prime_UTR 35.0%
CAAGAAGTGACAATAACAAC+CGG + chr5_3:7868526-7868545 Msa0795820:three_prime_UTR 35.0%
TCCCAAACAAAACATCCACA+AGG - chr5_3:7858157-7858176 None:intergenic 40.0%
AGAGAAATTGTGAATGGCGA+GGG - chr5_3:7858220-7858239 None:intergenic 40.0%
GAATTGGGAGAGGGTTATTA+GGG - chr5_3:7858249-7858268 None:intergenic 40.0%
AGAATTGGGAGAGGGTTATT+AGG - chr5_3:7858250-7858269 None:intergenic 40.0%
!! GATTGAAGGTAGTGGAGAAT+TGG - chr5_3:7858265-7858284 None:intergenic 40.0%
!! AGAGGATTTTGGTACTTGTC+TGG - chr5_3:7858418-7858437 None:intergenic 40.0%
TTCAGATCCGAATAAGAGAC+AGG + chr5_3:7858495-7858514 Msa0795820:CDS 40.0%
GGTATGGAAGGATTGAAATC+TGG + chr5_3:7858532-7858551 Msa0795820:CDS 40.0%
GGAAGGATTGAAATCTGGTT+TGG + chr5_3:7858537-7858556 Msa0795820:CDS 40.0%
TGAAGAGATTAAAGCCGAGT+TGG + chr5_3:7858585-7858604 Msa0795820:CDS 40.0%
AAGAAGGGAACATGAGAAGA+TGG + chr5_3:7858621-7858640 Msa0795820:CDS 40.0%
! GTGGCAAGTTTTCAATCTTC+CGG + chr5_3:7858643-7858662 Msa0795820:CDS 40.0%
! TGGCAAGTTTTCAATCTTCC+GGG + chr5_3:7858644-7858663 Msa0795820:CDS 40.0%
CAAATTAGCCAAAATCGTCC+CGG - chr5_3:7858665-7858684 None:intergenic 40.0%
!! AGCTAGCTTGTAGTTGATAG+TGG + chr5_3:7859065-7859084 Msa0795820:intron 40.0%
AAGTCCAGGGATTAATGAAC+TGG + chr5_3:7859241-7859260 Msa0795820:intron 40.0%
TTTATCCCATTAAGTGGGGT+CGG - chr5_3:7859311-7859330 None:intergenic 40.0%
GGACAAAAACTGAAATCTCC+TGG + chr5_3:7859431-7859450 Msa0795820:intron 40.0%
AAATATGTTCGTGGTCCAAG+AGG + chr5_3:7859493-7859512 Msa0795820:intron 40.0%
!! TCCAAGAGGTGTCAGTTTAA+TGG + chr5_3:7859507-7859526 Msa0795820:intron 40.0%
ACCATTAAACTGACACCTCT+TGG - chr5_3:7859511-7859530 None:intergenic 40.0%
AGCTGGACTTTGTAATCTCA+AGG + chr5_3:7859531-7859550 Msa0795820:intron 40.0%
GCTGGACTTTGTAATCTCAA+GGG + chr5_3:7859532-7859551 Msa0795820:intron 40.0%
! GATGTTTCTGAGCATCAGAA+TGG + chr5_3:7859760-7859779 Msa0795820:intron 40.0%
TTAGCAGTTGAAGGACATCA+AGG + chr5_3:7859845-7859864 Msa0795820:CDS 40.0%
TAATTGGAGTGCAGACATCA+CGG + chr5_3:7859954-7859973 Msa0795820:CDS 40.0%
AGTGTGATGATATAACGCTG+GGG - chr5_3:7860065-7860084 None:intergenic 40.0%
GAGTGTGATGATATAACGCT+GGG - chr5_3:7860066-7860085 None:intergenic 40.0%
TGAGTGTGATGATATAACGC+TGG - chr5_3:7860067-7860086 None:intergenic 40.0%
!! CATTTGTTGTTTCTGACAGC+TGG - chr5_3:7860158-7860177 None:intergenic 40.0%
CAGCTGTCAGAAACAACAAA+TGG + chr5_3:7860156-7860175 Msa0795820:CDS 40.0%
ATGTATGCTCTTCTATGCCT+TGG + chr5_3:7860181-7860200 Msa0795820:intron 40.0%
AAAGGAATGATCTGTCTGCA+TGG + chr5_3:7860429-7860448 Msa0795820:intron 40.0%
TGTTGGCCAATTCAAAGCAT+TGG + chr5_3:7860585-7860604 Msa0795820:intron 40.0%
!!! TTTGGCTTTTTGTTGCCTCA+GGG + chr5_3:7860612-7860631 Msa0795820:intron 40.0%
GGAAGAAAGAAGACGAGAAA+AGG + chr5_3:7860739-7860758 Msa0795820:CDS 40.0%
! TCCACCATTCTACTCTGAAA+AGG + chr5_3:7860865-7860884 Msa0795820:intron 40.0%
! CCACCATTCTACTCTGAAAA+GGG + chr5_3:7860866-7860885 Msa0795820:intron 40.0%
! CACCATTCTACTCTGAAAAG+GGG + chr5_3:7860867-7860886 Msa0795820:intron 40.0%
CTTTCTCAACTCCTTTAGCT+CGG + chr5_3:7860998-7861017 Msa0795820:intron 40.0%
TCTAAATCTCATGGCTGCAT+TGG + chr5_3:7861067-7861086 Msa0795820:CDS 40.0%
TGTCACTGTATTGTTGGCAA+AGG + chr5_3:7861181-7861200 Msa0795820:intron 40.0%
TTGTTGGCAAAGGTCTATTG+TGG + chr5_3:7861191-7861210 Msa0795820:intron 40.0%
!! AAAAGGAGGTGTTGACTAGA+TGG - chr5_3:7861380-7861399 None:intergenic 40.0%
! CTGGGGTCTATTTTCTTGTT+GGG + chr5_3:7861508-7861527 Msa0795820:intron 40.0%
TAAATTGAAAGGGAAAGGCC+AGG + chr5_3:7861623-7861642 Msa0795820:intron 40.0%
CATTCGGATTCTTAAAGCAG+TGG + chr5_3:7861665-7861684 Msa0795820:intron 40.0%
!! TTTTCTGCAGATGGTAGTGT+TGG + chr5_3:7861757-7861776 Msa0795820:intron 40.0%
AGGAAACATGTCTGTTGTCT+AGG + chr5_3:7861830-7861849 Msa0795820:intron 40.0%
TTCAGTGTAGAGGTGAAACT+TGG + chr5_3:7861901-7861920 Msa0795820:intron 40.0%
TGATACAGTCTCATCTTAGG+TGG + chr5_3:7862044-7862063 Msa0795820:intron 40.0%
!! CTGGATCTCTCTTTAAGGTT+TGG - chr5_3:7862198-7862217 None:intergenic 40.0%
! AATACTTGATAGCCTGTAGG+TGG + chr5_3:7862281-7862300 Msa0795820:intron 40.0%
CTATTAGCATAACCACCTAC+AGG - chr5_3:7862296-7862315 None:intergenic 40.0%
TCTTCCATTGAGATGGAAGT+TGG + chr5_3:7862409-7862428 Msa0795820:CDS 40.0%
GTTGTATGTAGTAGGACTTC+AGG + chr5_3:7862471-7862490 Msa0795820:CDS 40.0%
AGCCCCATGTGTAAAAAACA+GGG - chr5_3:7862792-7862811 None:intergenic 40.0%
TGAGGAAAAGGAGAGTGAAA+AGG - chr5_3:7862964-7862983 None:intergenic 40.0%
TCATGCCAGTCTCTTTAGTA+TGG - chr5_3:7862987-7863006 None:intergenic 40.0%
AAAGAGACTGGCATGATTTC+TGG + chr5_3:7862991-7863010 Msa0795820:intron 40.0%
AAGAGACTGGCATGATTTCT+GGG + chr5_3:7862992-7863011 Msa0795820:intron 40.0%
! TCTGGGATGTGGTACTTTAA+TGG + chr5_3:7863090-7863109 Msa0795820:intron 40.0%
ATAGGTGGAAACTGGAAACA+AGG - chr5_3:7863203-7863222 None:intergenic 40.0%
TTGTTTCCAGTTTCCACCTA+TGG + chr5_3:7863202-7863221 Msa0795820:intron 40.0%
!! AACCTTTTCAGGGTATTTCC+TGG + chr5_3:7863371-7863390 Msa0795820:intron 40.0%
AATGGTGTCTAGCATCTATC+AGG - chr5_3:7863467-7863486 None:intergenic 40.0%
!! ATGACTTGTTGATCCAATGG+TGG + chr5_3:7863591-7863610 Msa0795820:intron 40.0%
ACAAGTGTTCTTTCCACCAT+TGG - chr5_3:7863607-7863626 None:intergenic 40.0%
TTAAGCAACTCTTAGGGTAG+AGG + chr5_3:7863934-7863953 Msa0795820:intron 40.0%
GTTCACAAAGGAAGCTAAAC+AGG - chr5_3:7864011-7864030 None:intergenic 40.0%
! TACAGTACCGAAGTTCACAA+AGG - chr5_3:7864023-7864042 None:intergenic 40.0%
! TTGAACCCTATGTTTGCTAC+TGG + chr5_3:7864205-7864224 Msa0795820:CDS 40.0%
TTGCTTGCAATTGTCTCCAT+TGG + chr5_3:7864478-7864497 Msa0795820:intron 40.0%
GGAAAAAATGCCGCAGAAAA+AGG + chr5_3:7865295-7865314 Msa0795820:intron 40.0%
AAAAATGCCGCAGAAAAAGG+AGG + chr5_3:7865298-7865317 Msa0795820:intron 40.0%
! CTTTCTTCCTCCTTTTTCTG+CGG - chr5_3:7865308-7865327 None:intergenic 40.0%
TAACACTTCCTAAATGGTGG+TGG + chr5_3:7865355-7865374 Msa0795820:intron 40.0%
CAACTATGGCAGTAGCATAT+TGG - chr5_3:7865660-7865679 None:intergenic 40.0%
CAATATGCTACTGCCATAGT+TGG + chr5_3:7865658-7865677 Msa0795820:intron 40.0%
!! TCTAGCTCCCTCTGTATTTT+GGG - chr5_3:7865814-7865833 None:intergenic 40.0%
!!! TTCTAGCTCCCTCTGTATTT+TGG - chr5_3:7865815-7865834 None:intergenic 40.0%
CAGTTTGAGTCCTAATCATG+AGG + chr5_3:7865899-7865918 Msa0795820:intron 40.0%
CCTCAAGATTAGGACTCAAA+CGG - chr5_3:7865944-7865963 None:intergenic 40.0%
ATGCACACATTTATGCAGAC+AGG - chr5_3:7865990-7866009 None:intergenic 40.0%
AACAAGCAATTAGAAACGGG+TGG + chr5_3:7866195-7866214 Msa0795820:CDS 40.0%
ACTTGTGATTCCGTTTACTG+TGG + chr5_3:7866719-7866738 Msa0795820:intron 40.0%
GGATCTCAAACCACAGTAAA+CGG - chr5_3:7866732-7866751 None:intergenic 40.0%
GTGGACAGATCAGAAATCAA+AGG - chr5_3:7867094-7867113 None:intergenic 40.0%
CCAGAACAAACAACAACCAA+GGG - chr5_3:7867123-7867142 None:intergenic 40.0%
GTTCTGGCAAAACTAACTGA+AGG + chr5_3:7867136-7867155 Msa0795820:intron 40.0%
TTGGTGTAAGTCTTTACACC+TGG + chr5_3:7867257-7867276 Msa0795820:intron 40.0%
! CACGAAGGTGTAAAGAAATC+AGG + chr5_3:7867881-7867900 Msa0795820:CDS 40.0%
! AGTTTAGTTTCTCCTGGACA+AGG - chr5_3:7867926-7867945 None:intergenic 40.0%
TACAACCAACCAGATGCAAA+AGG - chr5_3:7868036-7868055 None:intergenic 40.0%
! TTTGCATCTGGTTGGTTGTA+TGG + chr5_3:7868036-7868055 Msa0795820:intron 40.0%
! TTGCATCTGGTTGGTTGTAT+GGG + chr5_3:7868037-7868056 Msa0795820:intron 40.0%
TGAACAATTAGTGATACCCC+AGG + chr5_3:7868099-7868118 Msa0795820:CDS 40.0%
GAACAATTAGTGATACCCCA+GGG + chr5_3:7868100-7868119 Msa0795820:CDS 40.0%
GTAAACAAGGCAAAACTGCA+GGG - chr5_3:7868176-7868195 None:intergenic 40.0%
TGTAAACAAGGCAAAACTGC+AGG - chr5_3:7868177-7868196 None:intergenic 40.0%
ACTGTTAGATGGAATGCAAG+AGG + chr5_3:7868219-7868238 Msa0795820:three_prime_UTR 40.0%
GCCTGAAAATTGTAGCTTGA+AGG - chr5_3:7868247-7868266 None:intergenic 40.0%
GCCCTGCAAATGATGAAATA+AGG + chr5_3:7868313-7868332 Msa0795820:three_prime_UTR 40.0%
! GCCCTTATTTCATCATTTGC+AGG - chr5_3:7868318-7868337 None:intergenic 40.0%
AAAATTGTGGTACAGCAGCA+GGG - chr5_3:7868396-7868415 None:intergenic 40.0%
CAACATTGTCCTACTCTCCA+AGG + chr5_3:7858107-7858126 Msa0795820:five_prime_UTR 45.0%
TCTTCTCTTCCTTGGAGAGT+AGG - chr5_3:7858119-7858138 None:intergenic 45.0%
TGTGAATGGCGAGGGTTTAA+GGG - chr5_3:7858212-7858231 None:intergenic 45.0%
TTGTGAATGGCGAGGGTTTA+AGG - chr5_3:7858213-7858232 None:intergenic 45.0%
CAGAGAAATTGTGAATGGCG+AGG - chr5_3:7858221-7858240 None:intergenic 45.0%
GATGATGCGATTGAAGGTAG+TGG - chr5_3:7858273-7858292 None:intergenic 45.0%
CATTGGGATGATGCGATTGA+AGG - chr5_3:7858279-7858298 None:intergenic 45.0%
CAATCGCATCATCCCAATGA+TGG + chr5_3:7858280-7858299 Msa0795820:five_prime_UTR 45.0%
ATTTCTTCGTCGGAGGATTC+GGG - chr5_3:7858359-7858378 None:intergenic 45.0%
GATTTCTTCGTCGGAGGATT+CGG - chr5_3:7858360-7858379 None:intergenic 45.0%
AGCTTTGCGGATTTCTTCGT+CGG - chr5_3:7858369-7858388 None:intergenic 45.0%
TCCGCAAAGCTTATCGTCAA+TGG + chr5_3:7858378-7858397 Msa0795820:exon 45.0%
CCCATTGACGATAAGCTTTG+CGG - chr5_3:7858382-7858401 None:intergenic 45.0%
CCGCAAAGCTTATCGTCAAT+GGG + chr5_3:7858379-7858398 Msa0795820:exon 45.0%
! TTTGGAACTTGGTTCGAGGT+TGG + chr5_3:7858555-7858574 Msa0795820:CDS 45.0%
! AGATTAAAGCCGAGTTGGAG+AGG + chr5_3:7858590-7858609 Msa0795820:CDS 45.0%
TCTCTTCAACCTCTCCAACT+CGG - chr5_3:7858602-7858621 None:intergenic 45.0%
TGGAGAGGTTGAAGAGAAGA+AGG + chr5_3:7858605-7858624 Msa0795820:CDS 45.0%
GGAGAGGTTGAAGAGAAGAA+GGG + chr5_3:7858606-7858625 Msa0795820:CDS 45.0%
AAGGGAACATGAGAAGATGG+TGG + chr5_3:7858624-7858643 Msa0795820:CDS 45.0%
! TCAATCTTCCGGGACGATTT+TGG + chr5_3:7858654-7858673 Msa0795820:CDS 45.0%
TCTGTGCCGCAGTATTTAGA+TGG + chr5_3:7858685-7858704 Msa0795820:CDS 45.0%
CCGTCACCATCTAAATACTG+CGG - chr5_3:7858694-7858713 None:intergenic 45.0%
CCGCAGTATTTAGATGGTGA+CGG + chr5_3:7858691-7858710 Msa0795820:CDS 45.0%
!! ATGGTGACGGTCTCTTTAGA+GGG + chr5_3:7858704-7858723 Msa0795820:CDS 45.0%
! GTTGATAAGCGAACTGATCG+TGG + chr5_3:7858784-7858803 Msa0795820:intron 45.0%
CACAGGGCATAATATCATCC+AGG - chr5_3:7859452-7859471 None:intergenic 45.0%
GGTGTCAGTTTAATGGTAGC+TGG + chr5_3:7859514-7859533 Msa0795820:intron 45.0%
GAGTTGAGATACCCATCCTT+AGG + chr5_3:7859706-7859725 Msa0795820:intron 45.0%
CGAAATGTTGTTGGGATTGG+CGG + chr5_3:7859818-7859837 Msa0795820:CDS 45.0%
! GCCGGTTTACGTTCACTAAT+TGG + chr5_3:7859938-7859957 Msa0795820:CDS 45.0%
!! TTGTTGTTTCTGACAGCTGG+CGG - chr5_3:7860155-7860174 None:intergenic 45.0%
TGGCTTTCAACCAGAAAACC+AGG + chr5_3:7860368-7860387 Msa0795820:intron 45.0%
!!! GTTTGGCTTTTTGTTGCCTC+AGG + chr5_3:7860611-7860630 Msa0795820:intron 45.0%
TCACAACCATCTGTAGCTGT+AGG + chr5_3:7860714-7860733 Msa0795820:CDS 45.0%
CACAACCATCTGTAGCTGTA+GGG + chr5_3:7860715-7860734 Msa0795820:CDS 45.0%
AAGTACCTTCACATCTGCAG+TGG - chr5_3:7860769-7860788 None:intergenic 45.0%
! CCCTTTTCAGAGTAGAATGG+TGG - chr5_3:7860869-7860888 None:intergenic 45.0%
! CTCCCCTTTTCAGAGTAGAA+TGG - chr5_3:7860872-7860891 None:intergenic 45.0%
AAATCTCATGGCTGCATTGG+AGG + chr5_3:7861070-7861089 Msa0795820:CDS 45.0%
GCTGCATTGGAGGAAGATTT+GGG + chr5_3:7861080-7861099 Msa0795820:CDS 45.0%
GTATGGAATGTCAGTGGCTA+AGG - chr5_3:7861464-7861483 None:intergenic 45.0%
GATGGTGTATGGAATGTCAG+TGG - chr5_3:7861470-7861489 None:intergenic 45.0%
! GCTGGGGTCTATTTTCTTGT+TGG + chr5_3:7861507-7861526 Msa0795820:intron 45.0%
!! GGTAACTGCTTTTCTGCAGA+TGG + chr5_3:7861748-7861767 Msa0795820:intron 45.0%
! GGAGAGTATACAACTCCACA+AGG + chr5_3:7861922-7861941 Msa0795820:intron 45.0%
TCCATTGAGATGGAAGTTGG+TGG + chr5_3:7862412-7862431 Msa0795820:CDS 45.0%
ACCACCAACTTCCATCTCAA+TGG - chr5_3:7862416-7862435 None:intergenic 45.0%
!! ATTGAGATGGAAGTTGGTGG+TGG + chr5_3:7862415-7862434 Msa0795820:CDS 45.0%
! ACACTCTTTAAAAGGGCAGC+CGG + chr5_3:7862694-7862713 Msa0795820:intron 45.0%
CCTACAACACACCAATTGGT+GGG - chr5_3:7862761-7862780 None:intergenic 45.0%
CAGCCCCATGTGTAAAAAAC+AGG - chr5_3:7862793-7862812 None:intergenic 45.0%
!! TTACACATGGGGCTGTTTCT+AGG + chr5_3:7862798-7862817 Msa0795820:intron 45.0%
GTTGTTGTCACGTGACTCAA+AGG - chr5_3:7862826-7862845 None:intergenic 45.0%
GAGAGTGAAAAGGCTAGTGT+AGG - chr5_3:7862954-7862973 None:intergenic 45.0%
CCAGTCTCTTTAGTATGGTG+AGG - chr5_3:7862982-7863001 None:intergenic 45.0%
CCTCACCATACTAAAGAGAC+TGG + chr5_3:7862979-7862998 Msa0795820:intron 45.0%
AGAGACTGGCATGATTTCTG+GGG + chr5_3:7862993-7863012 Msa0795820:intron 45.0%
!! GAACCCTAAAGTGTTGGGAA+GGG - chr5_3:7863256-7863275 None:intergenic 45.0%
CTCCAGGAAATACCCTGAAA+AGG - chr5_3:7863376-7863395 None:intergenic 45.0%
GTGGAAAGAACACTTGTGCA+TGG + chr5_3:7863610-7863629 Msa0795820:intron 45.0%
CAAAGGAAGCTAAACAGGGT+AGG - chr5_3:7864006-7864025 None:intergenic 45.0%
ACGCTCCAGTAGCAAACATA+GGG - chr5_3:7864213-7864232 None:intergenic 45.0%
AACGCTCCAGTAGCAAACAT+AGG - chr5_3:7864214-7864233 None:intergenic 45.0%
!! TAAGCAGAAGGCTCTAGAGA+AGG + chr5_3:7864921-7864940 Msa0795820:CDS 45.0%
GGAGGGAAAAACTTCTACTC+AGG + chr5_3:7864942-7864961 Msa0795820:CDS 45.0%
!! TCCTAAATGGTGGTGGTTGT+CGG + chr5_3:7865362-7865381 Msa0795820:intron 45.0%
! AAACATGTTGGCCTGGGTTT+GGG + chr5_3:7865541-7865560 Msa0795820:intron 45.0%
ATGAAGTTGGATGGCCATAG+CGG - chr5_3:7865618-7865637 None:intergenic 45.0%
GCAGACACAATGAAGTTGGA+TGG - chr5_3:7865627-7865646 None:intergenic 45.0%
CATGGCAGACACAATGAAGT+TGG - chr5_3:7865631-7865650 None:intergenic 45.0%
AGCACTAGCCCAAAATACAG+AGG + chr5_3:7865803-7865822 Msa0795820:intron 45.0%
GCACTAGCCCAAAATACAGA+GGG + chr5_3:7865804-7865823 Msa0795820:intron 45.0%
CACAGCCAAGAACTAAAAGG+AGG - chr5_3:7865855-7865874 None:intergenic 45.0%
CCGTTTGAGTCCTAATCTTG+AGG + chr5_3:7865941-7865960 Msa0795820:intron 45.0%
TTGTGCAGGTTCAAGAAGCA+AGG + chr5_3:7866118-7866137 Msa0795820:intron 45.0%
TGTGCAGGTTCAAGAAGCAA+GGG + chr5_3:7866119-7866138 Msa0795820:intron 45.0%
! AGACTTACACCTGGTGTCAA+CGG - chr5_3:7866576-7866595 None:intergenic 45.0%
!! CCCTTGGTTGTTGTTTGTTC+TGG + chr5_3:7867120-7867139 Msa0795820:intron 45.0%
GCCAGAACAAACAACAACCA+AGG - chr5_3:7867124-7867143 None:intergenic 45.0%
CCACATAAGGAACACATCAC+AGG - chr5_3:7867193-7867212 None:intergenic 45.0%
CCTGTGATGTGTTCCTTATG+TGG + chr5_3:7867190-7867209 Msa0795820:intron 45.0%
! GTCTTTACACCTGGTGTCAA+CGG + chr5_3:7867266-7867285 Msa0795820:intron 45.0%
TGCATCTTCGCGATAAAGGA+AGG - chr5_3:7867648-7867667 None:intergenic 45.0%
! TGGGAGCACACCTGAAATAA+TGG + chr5_3:7867834-7867853 Msa0795820:intron 45.0%
TTGTTGATGCAGCTTCACGA+AGG + chr5_3:7867866-7867885 Msa0795820:intron 45.0%
! GGATTTTGTGATCCTTGTCC+AGG + chr5_3:7867911-7867930 Msa0795820:CDS 45.0%
TATGTAGAGTACGCTCATGC+CGG + chr5_3:7867950-7867969 Msa0795820:CDS 45.0%
TTATATCCTGTGGATGCCCT+GGG - chr5_3:7868119-7868138 None:intergenic 45.0%
TTTATATCCTGTGGATGCCC+TGG - chr5_3:7868120-7868139 None:intergenic 45.0%
!! AGCTACAATTTTCAGGCCAG+TGG + chr5_3:7868250-7868269 Msa0795820:three_prime_UTR 45.0%
!! GCTACAATTTTCAGGCCAGT+GGG + chr5_3:7868251-7868270 Msa0795820:three_prime_UTR 45.0%
CAAAATTGTGGTACAGCAGC+AGG - chr5_3:7868397-7868416 None:intergenic 45.0%
ACGGCACTCGATGTTATTAC+CGG - chr5_3:7868548-7868567 None:intergenic 45.0%
!!! TTTATTTTTTTAAATAATTG+AGG - chr5_3:7859633-7859652 None:intergenic 5.0%
!! TTTCATTATTTATTAAATAT+TGG - chr5_3:7865247-7865266 None:intergenic 5.0%
!! TATTTAATAAATAATGAAAA+AGG + chr5_3:7865248-7865267 Msa0795820:intron 5.0%
CTCCAAGGAAGAGAAGAGAG+TGG + chr5_3:7858122-7858141 Msa0795820:five_prime_UTR 50.0%
GTCCACTCTCTTCTCTTCCT+TGG - chr5_3:7858127-7858146 None:intergenic 50.0%
GAGTGGACCAAGATACCTTG+TGG + chr5_3:7858139-7858158 Msa0795820:five_prime_UTR 50.0%
!! GGTAGTGGAGAATTGGGAGA+GGG - chr5_3:7858258-7858277 None:intergenic 50.0%
!! AGGTAGTGGAGAATTGGGAG+AGG - chr5_3:7858259-7858278 None:intergenic 50.0%
TTTGCGGATTTCTTCGTCGG+AGG - chr5_3:7858366-7858385 None:intergenic 50.0%
GTGGCAGCATCTTTCATGAG+AGG - chr5_3:7858436-7858455 None:intergenic 50.0%
!! CTGGTTTGGAACTTGGTTCG+AGG + chr5_3:7858551-7858570 Msa0795820:CDS 50.0%
!! GATGGTGACGGTCTCTTTAG+AGG + chr5_3:7858703-7858722 Msa0795820:CDS 50.0%
! GACGGTCTCTTTAGAGGGTA+TGG + chr5_3:7858709-7858728 Msa0795820:intron 50.0%
! AGCTAGCTTGTAGTTGGCAG+CGG + chr5_3:7858831-7858850 Msa0795820:intron 50.0%
ATGTAGCCGACCCCACTTAA+TGG + chr5_3:7859302-7859321 Msa0795820:intron 50.0%
TGTAGCCGACCCCACTTAAT+GGG + chr5_3:7859303-7859322 Msa0795820:intron 50.0%
GGCGGCAATTTAGCAGTTGA+AGG + chr5_3:7859836-7859855 Msa0795820:CDS 50.0%
GCAGTTGAAGGACATCAAGG+TGG + chr5_3:7859848-7859867 Msa0795820:CDS 50.0%
GTTGAAGGACATCAAGGTGG+TGG + chr5_3:7859851-7859870 Msa0795820:CDS 50.0%
TCACACTCATCTGCAACAGC+AGG + chr5_3:7860078-7860097 Msa0795820:CDS 50.0%
!! TGTTGTTTCTGACAGCTGGC+GGG - chr5_3:7860154-7860173 None:intergenic 50.0%
TGGTTGAAAGCCAGATGCAG+TGG - chr5_3:7860361-7860380 None:intergenic 50.0%
AACCATCTGTAGCTGTAGGG+TGG + chr5_3:7860718-7860737 Msa0795820:CDS 50.0%
TTCCACCCTACAGCTACAGA+TGG - chr5_3:7860723-7860742 None:intergenic 50.0%
GTCCTTTCGAGACATCAGCT+CGG + chr5_3:7861026-7861045 Msa0795820:CDS 50.0%
TACCGAGCTGATGTCTCGAA+AGG - chr5_3:7861031-7861050 None:intergenic 50.0%
GGCTGCATTGGAGGAAGATT+TGG + chr5_3:7861079-7861098 Msa0795820:CDS 50.0%
GCATTGGAGGAAGATTTGGG+AGG + chr5_3:7861083-7861102 Msa0795820:CDS 50.0%
GGAAAGGCCAGGATAAAGTG+TGG + chr5_3:7861634-7861653 Msa0795820:intron 50.0%
AGCAGCTCCACACTTTATCC+TGG - chr5_3:7861644-7861663 None:intergenic 50.0%
AAGTGTGGAGCTGCTGCATT+CGG + chr5_3:7861649-7861668 Msa0795820:intron 50.0%
CTTAGGTGGTTTGACATGCG+TGG + chr5_3:7862058-7862077 Msa0795820:intron 50.0%
CTCCTAAGTAGTGCTTCCCT+GGG - chr5_3:7862090-7862109 None:intergenic 50.0%
TCTCCTAAGTAGTGCTTCCC+TGG - chr5_3:7862091-7862110 None:intergenic 50.0%
!! AGATGGAAGTTGGTGGTGGA+AGG + chr5_3:7862419-7862438 Msa0795820:CDS 50.0%
! CCAGCGCACAGTACTGAATT+TGG - chr5_3:7862452-7862471 None:intergenic 50.0%
CCAAATTCAGTACTGTGCGC+TGG + chr5_3:7862449-7862468 Msa0795820:CDS 50.0%
!! GTGCGCTGGTTGTATGTAGT+AGG + chr5_3:7862463-7862482 Msa0795820:CDS 50.0%
! CACTCTTTAAAAGGGCAGCC+GGG + chr5_3:7862695-7862714 Msa0795820:intron 50.0%
CCCACCAATTGGTGTGTTGT+AGG + chr5_3:7862758-7862777 Msa0795820:intron 50.0%
GCCTACAACACACCAATTGG+TGG - chr5_3:7862762-7862781 None:intergenic 50.0%
GCTGCCTACAACACACCAAT+TGG - chr5_3:7862765-7862784 None:intergenic 50.0%
ACAACTTTACCGTTGCGCCA+AGG + chr5_3:7862841-7862860 Msa0795820:intron 50.0%
TGTTAGAAAAGGGGGAGCCT+TGG - chr5_3:7862861-7862880 None:intergenic 50.0%
ACGGGTCCAACATGATTCAG+TGG - chr5_3:7862916-7862935 None:intergenic 50.0%
GGGAAGGGAGGATCATGAAA+TGG - chr5_3:7863241-7863260 None:intergenic 50.0%
TCCTCCCTTCCCAACACTTT+AGG + chr5_3:7863249-7863268 Msa0795820:intron 50.0%
CCTCCCTTCCCAACACTTTA+GGG + chr5_3:7863250-7863269 Msa0795820:intron 50.0%
!! GGAACCCTAAAGTGTTGGGA+AGG - chr5_3:7863257-7863276 None:intergenic 50.0%
! GGGAGGAACCCTAAAGTGTT+GGG - chr5_3:7863261-7863280 None:intergenic 50.0%
AGGGAGGAACCCTAAAGTGT+TGG - chr5_3:7863262-7863281 None:intergenic 50.0%
TGCATTGAACCCTAACGCGT+GGG - chr5_3:7863287-7863306 None:intergenic 50.0%
TTGCATTGAACCCTAACGCG+TGG - chr5_3:7863288-7863307 None:intergenic 50.0%
!! CAGAAGGCTCTAGAGAAGGA+GGG + chr5_3:7864925-7864944 Msa0795820:CDS 50.0%
TCCGACAACCACCACCATTT+AGG - chr5_3:7865366-7865385 None:intergenic 50.0%
!! TAAATGGTGGTGGTTGTCGG+AGG + chr5_3:7865365-7865384 Msa0795820:intron 50.0%
! GAAACATGTTGGCCTGGGTT+TGG + chr5_3:7865540-7865559 Msa0795820:intron 50.0%
GCATTGAACTTGTGACTCGC+AGG - chr5_3:7865699-7865718 None:intergenic 50.0%
AAAGGGGAACTAAAGGCCAC+TGG - chr5_3:7865763-7865782 None:intergenic 50.0%
TTCTTGAACCTGCACAACCG+GGG - chr5_3:7866115-7866134 None:intergenic 50.0%
CTTCTTGAACCTGCACAACC+GGG - chr5_3:7866116-7866135 None:intergenic 50.0%
GCTTCTTGAACCTGCACAAC+CGG - chr5_3:7866117-7866136 None:intergenic 50.0%
GCAATTAGAAACGGGTGGAC+TGG + chr5_3:7866200-7866219 Msa0795820:CDS 50.0%
ATCTGTCCACACACAACCCT+TGG + chr5_3:7867104-7867123 Msa0795820:intron 50.0%
CAACAACCAAGGGTTGTGTG+TGG - chr5_3:7867113-7867132 None:intergenic 50.0%
AGAGAGAGAGAGAGAGAGTC+AGG - chr5_3:7867294-7867313 None:intergenic 50.0%
TCATGCCGGCAATCAACACA+AGG + chr5_3:7867964-7867983 Msa0795820:CDS 50.0%
TATATCCTGTGGATGCCCTG+GGG - chr5_3:7868118-7868137 None:intergenic 50.0%
CATTTGCAGGGCGTAACAGA+AGG - chr5_3:7868305-7868324 None:intergenic 50.0%
GGCGAGGGTTTAAGGGTGAA+AGG - chr5_3:7858205-7858224 None:intergenic 55.0%
AGGATTCGGGTGAGAGGTTG+AGG - chr5_3:7858346-7858365 None:intergenic 55.0%
TGGAGTGCAGACATCACGGT+TGG + chr5_3:7859958-7859977 Msa0795820:intron 55.0%
GACTGCCACTGCAGATGTGA+AGG + chr5_3:7860761-7860780 Msa0795820:CDS 55.0%
! CAACTCCTTTAGCTCGGCAC+AGG + chr5_3:7861004-7861023 Msa0795820:intron 55.0%
AAGGACCTGTGCCGAGCTAA+AGG - chr5_3:7861012-7861031 None:intergenic 55.0%
!! GACCCAGGGAAGCACTACTT+AGG + chr5_3:7862085-7862104 Msa0795820:intron 55.0%
ACTAATGCTCCCGCATACGC+AGG + chr5_3:7862721-7862740 Msa0795820:intron 55.0%
CTAATGCTCCCGCATACGCA+GGG + chr5_3:7862722-7862741 Msa0795820:intron 55.0%
!! CCCTAAAGTGTTGGGAAGGG+AGG - chr5_3:7863253-7863272 None:intergenic 55.0%
GCATTGAACCCTAACGCGTG+GGG - chr5_3:7863286-7863305 None:intergenic 55.0%
!! GCAGAAGGCTCTAGAGAAGG+AGG + chr5_3:7864924-7864943 Msa0795820:CDS 55.0%
TTGAGACCTGACCCAAACCC+AGG - chr5_3:7865555-7865574 None:intergenic 55.0%
TGGGTTTGGGTCAGGTCTCA+AGG + chr5_3:7865554-7865573 Msa0795820:intron 55.0%
AGTCAGGATCCGTTGACACC+AGG + chr5_3:7866564-7866583 Msa0795820:intron 55.0%
AGTCAGGATCCGTTGACACC+AGG - chr5_3:7866564-7866583 None:intergenic 55.0%
ACATGCGTGGAGACGACCCA+GGG + chr5_3:7862071-7862090 Msa0795820:intron 60.0%
!! TGCGGGAGCATTAGTGCACC+CGG - chr5_3:7862716-7862735 None:intergenic 60.0%
TTCCTGGACCCTGCGTATGC+GGG - chr5_3:7862733-7862752 None:intergenic 60.0%
CTTCCTGGACCCTGCGTATG+CGG - chr5_3:7862734-7862753 None:intergenic 60.0%
GCATACGCAGGGTCCAGGAA+GGG + chr5_3:7862733-7862752 Msa0795820:intron 60.0%
CATACGCAGGGTCCAGGAAG+GGG + chr5_3:7862734-7862753 Msa0795820:intron 60.0%
CAATTGGTGGGACCCCTTCC+TGG - chr5_3:7862749-7862768 None:intergenic 60.0%
CAGGAAGGGGTCCCACCAAT+TGG + chr5_3:7862747-7862766 Msa0795820:intron 60.0%
GAACCCTAACGCGTGGGGAA+GGG - chr5_3:7863281-7863300 None:intergenic 60.0%
TGAACCCTAACGCGTGGGGA+AGG - chr5_3:7863282-7863301 None:intergenic 60.0%
! TGTTGGCCTGGGTTTGGGTC+AGG + chr5_3:7865546-7865565 Msa0795820:intron 60.0%
AACCGGGGAAGCAGAGGAAG+GGG - chr5_3:7866100-7866119 None:intergenic 60.0%
CAACCGGGGAAGCAGAGGAA+GGG - chr5_3:7866101-7866120 None:intergenic 60.0%
ACAACCGGGGAAGCAGAGGA+AGG - chr5_3:7866102-7866121 None:intergenic 60.0%
! TGATACCCCAGGGCATCCAC+AGG + chr5_3:7868110-7868129 Msa0795820:CDS 60.0%
CGTCGGAGGATTCGGGTGAG+AGG - chr5_3:7858352-7858371 None:intergenic 65.0%
GACATGCGTGGAGACGACCC+AGG + chr5_3:7862070-7862089 Msa0795820:intron 65.0%
CGCATACGCAGGGTCCAGGA+AGG + chr5_3:7862732-7862751 Msa0795820:intron 65.0%
AAGGGGGAGCCTTGGCGCAA+CGG - chr5_3:7862853-7862872 None:intergenic 65.0%
TCCTCCCTTCCCCACGCGTT+AGG + chr5_3:7863274-7863293 Msa0795820:intron 65.0%
CCTCCCTTCCCCACGCGTTA+GGG + chr5_3:7863275-7863294 Msa0795820:intron 65.0%
ACCCCCTTCCTCTGCTTCCC+CGG + chr5_3:7866095-7866114 Msa0795820:intron 65.0%
ACCGGGGAAGCAGAGGAAGG+GGG - chr5_3:7866099-7866118 None:intergenic 65.0%
CTGCACAACCGGGGAAGCAG+AGG - chr5_3:7866106-7866125 None:intergenic 65.0%
CTCTGCTTCCCCGGTTGTGC+AGG + chr5_3:7866104-7866123 Msa0795820:intron 65.0%
CTCCCGCATACGCAGGGTCC+AGG + chr5_3:7862728-7862747 Msa0795820:intron 70.0%
CCCTAACGCGTGGGGAAGGG+AGG - chr5_3:7863278-7863297 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 7858107 7868612 7858107 ID=Msa0795820;Name=Msa0795820
chr5_3 mRNA 7858107 7868612 7858107 ID=Msa0795820-mRNA-1;Parent=Msa0795820;Name=Msa0795820-mRNA-1;_AED=0.03;_eAED=0.03;_QI=290|1|1|1|0.90|0.91|12|474|506
chr5_3 exon 7858107 7858725 7858107 ID=Msa0795820-mRNA-1:exon:3210;Parent=Msa0795820-mRNA-1
chr5_3 exon 7859778 7859975 7859778 ID=Msa0795820-mRNA-1:exon:3211;Parent=Msa0795820-mRNA-1
chr5_3 exon 7860068 7860182 7860068 ID=Msa0795820-mRNA-1:exon:3212;Parent=Msa0795820-mRNA-1
chr5_3 exon 7860696 7860782 7860696 ID=Msa0795820-mRNA-1:exon:3213;Parent=Msa0795820-mRNA-1
chr5_3 exon 7861016 7861104 7861016 ID=Msa0795820-mRNA-1:exon:3214;Parent=Msa0795820-mRNA-1
chr5_3 exon 7862408 7862492 7862408 ID=Msa0795820-mRNA-1:exon:3215;Parent=Msa0795820-mRNA-1
chr5_3 exon 7863382 7863435 7863382 ID=Msa0795820-mRNA-1:exon:3216;Parent=Msa0795820-mRNA-1
chr5_3 exon 7864187 7864267 7864187 ID=Msa0795820-mRNA-1:exon:3217;Parent=Msa0795820-mRNA-1
chr5_3 exon 7864886 7864963 7864886 ID=Msa0795820-mRNA-1:exon:3218;Parent=Msa0795820-mRNA-1
chr5_3 exon 7866126 7866365 7866126 ID=Msa0795820-mRNA-1:exon:3219;Parent=Msa0795820-mRNA-1
chr5_3 exon 7867878 7867985 7867878 ID=Msa0795820-mRNA-1:exon:3220;Parent=Msa0795820-mRNA-1
chr5_3 exon 7868082 7868612 7868082 ID=Msa0795820-mRNA-1:exon:3221;Parent=Msa0795820-mRNA-1
chr5_3 five_prime_UTR 7858107 7858396 7858107 ID=Msa0795820-mRNA-1:five_prime_utr;Parent=Msa0795820-mRNA-1
chr5_3 CDS 7858397 7858725 7858397 ID=Msa0795820-mRNA-1:cds;Parent=Msa0795820-mRNA-1
chr5_3 CDS 7859778 7859975 7859778 ID=Msa0795820-mRNA-1:cds;Parent=Msa0795820-mRNA-1
chr5_3 CDS 7860068 7860182 7860068 ID=Msa0795820-mRNA-1:cds;Parent=Msa0795820-mRNA-1
chr5_3 CDS 7860696 7860782 7860696 ID=Msa0795820-mRNA-1:cds;Parent=Msa0795820-mRNA-1
chr5_3 CDS 7861016 7861104 7861016 ID=Msa0795820-mRNA-1:cds;Parent=Msa0795820-mRNA-1
chr5_3 CDS 7862408 7862492 7862408 ID=Msa0795820-mRNA-1:cds;Parent=Msa0795820-mRNA-1
chr5_3 CDS 7863382 7863435 7863382 ID=Msa0795820-mRNA-1:cds;Parent=Msa0795820-mRNA-1
chr5_3 CDS 7864187 7864267 7864187 ID=Msa0795820-mRNA-1:cds;Parent=Msa0795820-mRNA-1
chr5_3 CDS 7864886 7864963 7864886 ID=Msa0795820-mRNA-1:cds;Parent=Msa0795820-mRNA-1
chr5_3 CDS 7866126 7866365 7866126 ID=Msa0795820-mRNA-1:cds;Parent=Msa0795820-mRNA-1
chr5_3 CDS 7867878 7867985 7867878 ID=Msa0795820-mRNA-1:cds;Parent=Msa0795820-mRNA-1
chr5_3 CDS 7868082 7868138 7868082 ID=Msa0795820-mRNA-1:cds;Parent=Msa0795820-mRNA-1
chr5_3 three_prime_UTR 7868139 7868612 7868139 ID=Msa0795820-mRNA-1:three_prime_utr;Parent=Msa0795820-mRNA-1
Gene Sequence

>Msa0795820

ATGGGCACAAGCTATCATCCAGACAAGTACCAAAATCCTCTCATGAAAGATGCTGCCACTGAGAATTTTCAACGAGTTTGTGAAGCTTATGAGATTCTTTCAGATCCGAATAAGAGACAGGTTTATGATATTTATGGTATGGAAGGATTGAAATCTGGTTTGGAACTTGGTTCGAGGTTGGACAGAGCTGAAGAGATTAAAGCCGAGTTGGAGAGGTTGAAGAGAAGAAGGGAACATGAGAAGATGGTGGCAAGTTTTCAATCTTCCGGGACGATTTTGGCTAATTTGTCTGTGCCGCAGTATTTAGATGGTGACGGTCTCTTTAGAGGAATGGCAATGACGAGTGAAGTTCAGTCTCAATTGTCAAAACGAAATGTTGTTGGGATTGGCGGCAATTTAGCAGTTGAAGGACATCAAGGTGGTGGAGCTGCTAATGCTGTATTAAGTCATCAACTTTCTGAGGCTTCGTCAATAGAATTTATTGCTTCAGCCGGTTTACGTTCACTAATTGGAGTGCAGACATCACGCGTTATATCATCACACTCATCTGCAACAGCAGGCTTAACAATGTCTTTGAGAGATGGTTCGTTGAATCTTTCTAATGCATGGACCCGCCAGCTGTCAGAAACAACAAATGGACATATACAACTCATGTTGGGATCACAACCATCTGTAGCTGTAGGGTGGAAGAAAGAAGACGAGAAAAGGACTGCCACTGCAGATGTGAAGCTCGGCACAGGTCCTTTCGAGACATCAGCTCGGTATACTCATCGATTTTCTTCTAAATCTCATGGCTGCATTGGAGGAAGATTTGGGAGCTCTTCCATTGAGATGGAAGTTGGTGGTGGAAGGAAGTTATCCAAATTCAGTACTGTGCGCTGGTTGTATGTAGTAGGACTTCAGGGTATTTCCTGGAGATTTGAATTCTGTCGTGGGGGTCAGAAGTTGATTATTCCTATTTTGCTGACGAATCATTTGAACCCTATGTTTGCTACTGGAGCGTTAGTTATTCCAGCATCGTTTTACTTTGTTCTGAAGAAATTTGTCATTAAACCGTATTACCTTAAAAGGAATAAGCAGAAGGCTCTAGAGAAGGAGGGAAAAACTTCTACTCAGGTTCAAGAAGCAAGGGCAGCAGCAGAAAAAGCTCAGAAATTACAACAAAATGTAGCTAATAGGAAAAGAAACAAGCAATTAGAAACGGGTGGACTGGTTGTTATGAAAGCGCTATATGGAAGTGATACAGTTTTGAACAACTTGTATTCGTCAAATGGAACAAGTTTTGAATCTACTTCAGGAGTCATTGATGTTACAACACCTCTGAATTTTCTAGTTAATGATTCTGGTCAACTTAAGCTTCACGAAGGTGTAAAGAAATCAGGAATCATGGGATTTTGTGATCCTTGTCCAGGAGAAACTAAACTGTTGTATGTAGAGTACGCTCATGCCGGCAATCAACACAAGGTATTGGTTGGTGACTATGAACAATTAGTGATACCCCAGGGCATCCACAGGATATAA

Protein sequence

>Msa0795820

MGTSYHPDKYQNPLMKDAATENFQRVCEAYEILSDPNKRQVYDIYGMEGLKSGLELGSRLDRAEEIKAELERLKRRREHEKMVASFQSSGTILANLSVPQYLDGDGLFRGMAMTSEVQSQLSKRNVVGIGGNLAVEGHQGGGAANAVLSHQLSEASSIEFIASAGLRSLIGVQTSRVISSHSSATAGLTMSLRDGSLNLSNAWTRQLSETTNGHIQLMLGSQPSVAVGWKKEDEKRTATADVKLGTGPFETSARYTHRFSSKSHGCIGGRFGSSSIEMEVGGGRKLSKFSTVRWLYVVGLQGISWRFEFCRGGQKLIIPILLTNHLNPMFATGALVIPASFYFVLKKFVIKPYYLKRNKQKALEKEGKTSTQVQEARAAAEKAQKLQQNVANRKRNKQLETGGLVVMKALYGSDTVLNNLYSSNGTSFESTSGVIDVTTPLNFLVNDSGQLKLHEGVKKSGIMGFCDPCPGETKLLYVEYAHAGNQHKVLVGDYEQLVIPQGIHRI*