AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0580470

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0580470 MtrunA17_Chr5g0399201 97.778 540 12 0 1 540 1 540 0.0 1103
Msa0580470 MtrunA17_Chr4g0040501 47.297 74 37 1 12 85 4 75 8.66e-16 79.0
Msa0580470 MtrunA17_Chr2g0282761 46.753 77 39 1 12 88 4 78 9.82e-16 78.6
Msa0580470 MtrunA17_Chr2g0282741 48.649 74 36 1 12 85 4 75 1.50e-15 78.2
Msa0580470 MtrunA17_Chr4g0006391 47.297 74 37 1 12 85 4 75 4.58e-15 76.6
Msa0580470 MtrunA17_Chr8g0334811 45.000 80 37 1 9 88 11 83 1.39e-14 75.9
Msa0580470 MtrunA17_Chr1g0159491 45.333 75 38 1 12 86 6 77 3.76e-14 67.8
Msa0580470 MtrunA17_Chr2g0324921 45.946 74 38 1 12 85 4 75 4.62e-14 73.6
Msa0580470 MtrunA17_Chr5g0427221 43.662 71 37 1 11 81 47 114 1.40e-13 68.2
Msa0580470 MtrunA17_Chr1g0209551 48.684 76 36 1 11 86 15 87 1.83e-13 72.4
Msa0580470 MtrunA17_Chr7g0269841 48.000 75 36 2 11 85 25 96 2.24e-13 71.6
Msa0580470 MtrunA17_Chr3g0123861 44.595 74 37 1 12 85 82 151 3.43e-13 71.6
Msa0580470 MtrunA17_Chr5g0393371 45.977 87 38 3 12 97 6 84 3.55e-13 71.6
Msa0580470 MtrunA17_Chr4g0021141 38.462 78 45 1 3 80 13 87 4.53e-13 66.6
Msa0580470 MtrunA17_Chr3g0138471 43.243 74 40 1 12 85 4 75 9.09e-13 69.7
Msa0580470 MtrunA17_Chr2g0278951 38.017 121 62 3 4 123 47 155 1.07e-12 66.6
Msa0580470 MtrunA17_Chr2g0278961 37.719 114 58 3 4 116 47 148 1.15e-12 66.6
Msa0580470 MtrunA17_Chr2g0333221 40.741 81 44 1 12 92 70 146 4.83e-12 68.2
Msa0580470 MtrunA17_Chr6g0478651 42.667 75 39 1 11 85 67 137 6.04e-12 68.2
Msa0580470 MtrunA17_Chr8g0344721 42.857 70 37 1 12 78 10 79 2.34e-11 63.9
Msa0580470 MtrunA17_Chr4g0044331 46.667 60 31 1 19 77 19 78 9.08e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0580470 AT2G35720.1 63.498 526 189 1 10 535 13 535 0.0 696
Msa0580470 AT3G47940.1 48.052 77 37 2 12 87 4 78 1.05e-16 82.0
Msa0580470 AT1G59725.1 45.946 74 37 2 12 84 4 75 3.02e-16 80.5
Msa0580470 AT4G28480.2 45.455 77 40 1 12 88 4 78 2.14e-15 77.4
Msa0580470 AT2G20560.1 46.753 77 39 1 12 88 4 78 2.90e-15 77.8
Msa0580470 AT1G10350.1 44.000 75 40 1 12 86 4 76 3.72e-15 77.4
Msa0580470 AT4G28480.1 45.455 77 40 1 12 88 4 78 4.46e-15 77.4
Msa0580470 AT5G01390.3 45.205 73 38 1 12 84 4 74 5.08e-15 75.1
Msa0580470 AT5G01390.4 45.205 73 38 1 12 84 4 74 6.88e-15 74.7
Msa0580470 AT5G01390.2 45.205 73 38 1 12 84 4 74 9.19e-15 75.1
Msa0580470 AT3G08910.1 45.333 75 39 1 12 86 4 76 1.05e-14 75.9
Msa0580470 AT5G25530.2 44.444 81 43 1 12 92 4 82 1.31e-14 75.9
Msa0580470 AT5G01390.1 45.205 73 38 1 12 84 4 74 1.58e-14 75.5
Msa0580470 AT2G33735.1 42.857 70 37 1 8 77 18 84 8.52e-14 68.6
Msa0580470 AT2G33735.2 42.857 70 37 1 8 77 18 84 8.52e-14 68.6
Msa0580470 AT1G80030.4 45.333 75 37 1 12 86 75 145 7.27e-13 71.2
Msa0580470 AT1G80030.2 45.333 75 37 1 12 86 75 145 7.66e-13 71.2
Msa0580470 AT1G80030.3 45.333 75 37 1 12 86 75 145 7.66e-13 71.2
Msa0580470 AT1G80030.1 45.333 75 37 1 12 86 75 145 7.66e-13 71.2
Msa0580470 AT5G16650.1 41.250 80 44 1 2 81 1 77 9.66e-13 65.9
Msa0580470 AT3G62600.1 45.333 75 38 1 11 85 25 96 1.12e-12 69.7
Msa0580470 AT3G14200.1 43.590 78 44 0 1 78 1 78 1.53e-12 67.8
Msa0580470 AT2G21510.3 50.000 74 34 2 12 85 6 76 2.35e-12 68.9
Msa0580470 AT2G21510.1 50.000 74 34 2 12 85 6 76 2.35e-12 68.9
Msa0580470 AT2G21510.2 50.000 74 34 2 12 85 6 76 2.63e-12 68.9
Msa0580470 AT2G21510.4 50.000 74 34 2 12 85 6 76 2.63e-12 68.9
Msa0580470 AT2G21510.5 50.000 74 34 2 12 85 6 76 3.51e-12 68.2
Msa0580470 AT5G16650.2 41.250 80 44 1 2 81 1 77 3.53e-12 65.5
Msa0580470 AT2G22360.1 39.506 81 45 1 12 92 86 162 3.86e-12 68.9
Msa0580470 AT4G39960.1 42.857 77 38 2 10 85 83 154 4.48e-12 68.6
Msa0580470 AT4G39960.2 42.857 77 38 2 10 85 83 154 4.48e-12 68.6
Msa0580470 AT1G68370.1 43.210 81 42 2 11 90 16 93 8.03e-12 67.8
Msa0580470 AT1G59980.2 43.210 81 43 2 4 84 15 92 1.18e-11 67.0
Msa0580470 AT1G21080.1 45.455 77 39 2 12 88 6 79 1.66e-11 66.6
Msa0580470 AT1G21080.3 45.455 77 39 2 12 88 6 79 1.69e-11 66.6
Msa0580470 AT1G59980.1 43.210 81 43 2 4 84 15 92 1.71e-11 66.6
Msa0580470 AT4G39150.3 48.649 74 35 2 12 85 6 76 6.19e-11 64.7
Msa0580470 AT4G39150.1 48.649 74 35 2 12 85 6 76 6.19e-11 64.7
Msa0580470 AT4G39150.2 48.649 74 35 2 12 85 6 76 6.19e-11 64.7
Msa0580470 AT1G72416.2 35.443 79 49 1 12 88 5 83 8.66e-11 61.6
Msa0580470 AT1G72416.1 35.443 79 49 1 12 88 5 83 9.00e-11 61.6
Msa0580470 AT1G72416.4 35.443 79 49 1 12 88 5 83 9.34e-11 61.6

Find 166 sgRNAs with CRISPR-Local

Find 768 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGTGAATGGCGAGGGTTTA+AGG 0.122656 4_1:+85566461 None:intergenic
AGACAGGTTTATGATATTTA+TGG 0.168325 4_1:-85566162 Msa0580470:CDS
TGGAGAATTTGAGGGTTATT+AGG 0.204186 4_1:+85566424 None:intergenic
GCCGGTTTACGTTCACTAAT+TGG 0.209362 4_1:-85564735 Msa0580470:CDS
TCAATCTTCCGGGACGATTT+TGG 0.212595 4_1:-85566019 Msa0580470:CDS
CATCTTTCATGAGAGGATTT+TGG 0.213944 4_1:+85566247 None:intergenic
GCCCTGCAAATGATGAAATA+AGG 0.217665 4_1:-85556418 Msa0580470:three_prime_UTR
TTAAACCGTATTACCTTAAA+AGG 0.228193 4_1:-85559777 Msa0580470:CDS
GGCTGCATTGGAGGAAGATT+TGG 0.245321 4_1:-85563594 Msa0580470:CDS
TGCAACCAATGAACAATAAA+AGG 0.255425 4_1:+85555640 None:intergenic
GTCCACTCTCTTCTCTTCCT+TGG 0.268936 4_1:+85566547 None:intergenic
CCAGCGCACAGTACTGAATT+TGG 0.281518 4_1:+85562224 None:intergenic
GATTTCTTCGTCGGAGGATT+CGG 0.296432 4_1:+85566317 None:intergenic
TTTCATTTAAGGTTTGTTAT+TGG 0.305907 4_1:-85555574 Msa0580470:three_prime_UTR
GGAGAATTTGAGGGTTATTA+GGG 0.310172 4_1:+85566425 None:intergenic
TGGGCAAGAATGAACTTATA+TGG 0.332265 4_1:+85555608 None:intergenic
TGTGAATGGCGAGGGTTTAA+GGG 0.347573 4_1:+85566462 None:intergenic
GATGGTGACGGTCTCTTTAG+AGG 0.353128 4_1:-85565970 Msa0580470:CDS
ATAAGTGCCTTGGCTGATAA+AGG 0.363147 4_1:+85555469 None:intergenic
TTTATATCCTGTGGATGCCC+TGG 0.364969 4_1:+85556614 None:intergenic
TTGAAATCTGGTTTGGAACT+TGG 0.365381 4_1:-85566129 Msa0580470:CDS
AACAACTTGTATTCGTCAAA+TGG 0.369969 4_1:-85558412 Msa0580470:CDS
GGTATGGAAGGATTGAAATC+TGG 0.376748 4_1:-85566141 Msa0580470:CDS
TCATAAACCTGTCTCTTATT+CGG 0.380932 4_1:+85566171 None:intergenic
TCCAATTAGTGAACGTAAAC+CGG 0.384708 4_1:+85564734 None:intergenic
GGAAGGATTGAAATCTGGTT+TGG 0.386145 4_1:-85566136 Msa0580470:CDS
TAATGATTCTGGTCAACTTA+AGG 0.387282 4_1:-85558329 Msa0580470:intron
TGGAGAGGTTGAAGAGAAGA+AGG 0.387919 4_1:-85566068 Msa0580470:CDS
GCCCTTATTTCATCATTTGC+AGG 0.390253 4_1:+85556416 None:intergenic
TACAACAAAATGTAGCTAAT+AGG 0.392977 4_1:-85558507 Msa0580470:CDS
ATTTCTTCGTCGGAGGATTC+GGG 0.394666 4_1:+85566318 None:intergenic
GCTGCATTGGAGGAAGATTT+GGG 0.396220 4_1:-85563593 Msa0580470:CDS
TCCGCAAAGCTTATCGTCAA+TGG 0.396259 4_1:-85566296 Msa0580470:CDS
GTTGTATGTAGTAGGACTTC+AGG 0.398493 4_1:-85562202 Msa0580470:intron
CCCATTGACGATAAGCTTTG+CGG 0.402719 4_1:+85566295 None:intergenic
TAAATGAAAATTACAGCCAT+TGG 0.405863 4_1:+85555588 None:intergenic
TTATATCCTGTGGATGCCCT+GGG 0.405887 4_1:+85556615 None:intergenic
CATTTGTTGTTTCTGACAGC+TGG 0.407604 4_1:+85564518 None:intergenic
CACGAAGGTGTAAAGAAATC+AGG 0.413837 4_1:-85556850 Msa0580470:CDS
TAATACCTTGTGTTGATTGC+CGG 0.416603 4_1:+85556762 None:intergenic
CGAAATGTTGTTGGGATTGG+CGG 0.418527 4_1:-85564855 Msa0580470:CDS
TGTAAAGAAATCAGGAATCA+TGG 0.420936 4_1:-85556842 Msa0580470:CDS
AGGATTCGGGTGAGAGGTTG+AGG 0.426031 4_1:+85566331 None:intergenic
CAAAATTGTGGTACAGCAGC+AGG 0.426304 4_1:+85556337 None:intergenic
CCCTGCAAATGATGAAATAA+GGG 0.427287 4_1:-85556417 Msa0580470:three_prime_UTR
TTGAACCCTATGTTTGCTAC+TGG 0.427445 4_1:-85560468 Msa0580470:CDS
TACAACAGTTTAGTTTCTCC+TGG 0.432887 4_1:+85556802 None:intergenic
TGTCAAAACGAAATGTTGTT+GGG 0.434109 4_1:-85564863 Msa0580470:CDS
AAAACATCCACAAGGTATCT+TGG 0.434823 4_1:+85566525 None:intergenic
GTTGTTATGAAAGCGCTATA+TGG 0.436734 4_1:-85558451 Msa0580470:CDS
AAATCTCATGGCTGCATTGG+AGG 0.439365 4_1:-85563603 Msa0580470:CDS
CGTTGAATCTTTCTAATGCA+TGG 0.443709 4_1:-85564546 Msa0580470:CDS
TGAAGGTAGTGGAGAATTTG+AGG 0.443920 4_1:+85566415 None:intergenic
AAATGAAAATTACAGCCATT+GGG 0.452490 4_1:+85555589 None:intergenic
TTGTCAAAACGAAATGTTGT+TGG 0.453469 4_1:-85564864 Msa0580470:CDS
GCCTGAAAATTGTAGCTTGA+AGG 0.454345 4_1:+85556487 None:intergenic
GGCGGCAATTTAGCAGTTGA+AGG 0.457018 4_1:-85564837 Msa0580470:CDS
AAGAAGGGAACATGAGAAGA+TGG 0.457897 4_1:-85566052 Msa0580470:CDS
CTGGTTTGGAACTTGGTTCG+AGG 0.462985 4_1:-85566122 Msa0580470:CDS
AAACGAAATGTTGTTGGGAT+TGG 0.467280 4_1:-85564858 Msa0580470:CDS
AAGAATGAACTTATATGGTT+GGG 0.469538 4_1:+85555613 None:intergenic
GGTTTATGATATTTATGGTA+TGG 0.473781 4_1:-85566157 Msa0580470:CDS
GAAGGTAGTGGAGAATTTGA+GGG 0.476111 4_1:+85566416 None:intergenic
AAGAAACAAGCAATTAGAAA+CGG 0.479082 4_1:-85558482 Msa0580470:CDS
CAATCGCATCATCCCAATGA+TGG 0.480172 4_1:-85566394 Msa0580470:exon
TCTAAATCTCATGGCTGCAT+TGG 0.480181 4_1:-85563606 Msa0580470:CDS
AGAAACAAGCAATTAGAAAC+GGG 0.485283 4_1:-85558481 Msa0580470:CDS
ACGGCACTCGATGTTATTAC+CGG 0.487856 4_1:+85555521 None:intergenic
TTCAGATCCGAATAAGAGAC+AGG 0.488853 4_1:-85566178 Msa0580470:CDS
CAAGAATGAACTTATATGGT+TGG 0.490807 4_1:+85555612 None:intergenic
CCGCAAAGCTTATCGTCAAT+GGG 0.491774 4_1:-85566295 Msa0580470:CDS
TAATATTTCTTTATATCCTG+TGG 0.491894 4_1:+85556605 None:intergenic
TATGATATTTATGGTATGGA+AGG 0.492093 4_1:-85566153 Msa0580470:CDS
TTTCAGATACAACTCATGTT+GGG 0.497567 4_1:-85563983 Msa0580470:intron
TGTTGTTTCTGACAGCTGGC+GGG 0.500265 4_1:+85564522 None:intergenic
CATTGGGATGATGCGATTGA+AGG 0.501590 4_1:+85566398 None:intergenic
TCTTCCATTGAGATGGAAGT+TGG 0.502607 4_1:-85562264 Msa0580470:CDS
AGCTTTGCGGATTTCTTCGT+CGG 0.502755 4_1:+85566308 None:intergenic
GGAAGAAAGAAGACGAGAAA+AGG 0.504085 4_1:-85563934 Msa0580470:CDS
TTAACAATGTCTTTGAGAGA+TGG 0.505493 4_1:-85564571 Msa0580470:CDS
CCCTTATTTCATCATTTGCA+GGG 0.506393 4_1:+85556417 None:intergenic
TCTGTGCCGCAGTATTTAGA+TGG 0.507210 4_1:-85565988 Msa0580470:CDS
GCAATTAGAAACGGGTGGAC+TGG 0.509279 4_1:-85558473 Msa0580470:CDS
ACCACCAACTTCCATCTCAA+TGG 0.513249 4_1:+85562260 None:intergenic
AGAACAAAGTAAAACGATGC+TGG 0.514699 4_1:+85560432 None:intergenic
CAAGAAGTGACAATAACAAC+CGG 0.521357 4_1:-85555540 Msa0580470:three_prime_UTR
TTTGGAACTTGGTTCGAGGT+TGG 0.521456 4_1:-85566118 Msa0580470:CDS
GGAGAGGTTGAAGAGAAGAA+GGG 0.521692 4_1:-85566067 Msa0580470:CDS
TGGAGATTTGAATTCTGTCG+TGG 0.521929 4_1:-85561282 Msa0580470:CDS
TGTAAACAAGGCAAAACTGC+AGG 0.526095 4_1:+85556557 None:intergenic
ATTTCAGATACAACTCATGT+TGG 0.526912 4_1:-85563984 Msa0580470:intron
CAACTCCTTTAGCTCGGCAC+AGG 0.529594 4_1:-85563669 Msa0580470:intron
GGAGATTTGAATTCTGTCGT+GGG 0.529795 4_1:-85561281 Msa0580470:CDS
AGATTAAAGCCGAGTTGGAG+AGG 0.534621 4_1:-85566083 Msa0580470:CDS
GTAAAGAAATCAGGAATCAT+GGG 0.535679 4_1:-85556841 Msa0580470:CDS
ACGACAGAATTCAAATCTCC+AGG 0.537158 4_1:+85561284 None:intergenic
TCCATTGAGATGGAAGTTGG+TGG 0.539674 4_1:-85562261 Msa0580470:CDS
TCTTCTCTTCCTTGGAGAGT+CGG 0.540377 4_1:+85566555 None:intergenic
ATAGAATTTATTGCTTCAGC+CGG 0.541957 4_1:-85564753 Msa0580470:CDS
TCTCTTCAACCTCTCCAACT+CGG 0.543108 4_1:+85566074 None:intergenic
TTGTTGTTTCTGACAGCTGG+CGG 0.544720 4_1:+85564521 None:intergenic
CCAAATTCAGTACTGTGCGC+TGG 0.546174 4_1:-85562224 Msa0580470:CDS
TGAAGAGATTAAAGCCGAGT+TGG 0.546959 4_1:-85566088 Msa0580470:CDS
ATTAAGTCATCAACTTTCTG+AGG 0.548247 4_1:-85564784 Msa0580470:CDS
TCACAACCATCTGTAGCTGT+AGG 0.549045 4_1:-85563959 Msa0580470:CDS
CAGCTGTCAGAAACAACAAA+TGG 0.555163 4_1:-85564517 Msa0580470:CDS
GTTGAAGGACATCAAGGTGG+TGG 0.555707 4_1:-85564822 Msa0580470:CDS
TTGCCTTGTTTACATACTTG+AGG 0.556004 4_1:-85556548 Msa0580470:three_prime_UTR
GACTGCCACTGCAGATGTGA+AGG 0.563742 4_1:-85563912 Msa0580470:intron
TCACACTCATCTGCAACAGC+AGG 0.565108 4_1:-85564595 Msa0580470:CDS
GCAGAAGGCTCTAGAGAAGG+AGG 0.565595 4_1:-85559749 Msa0580470:CDS
TTAGCAGTTGAAGGACATCA+AGG 0.567675 4_1:-85564828 Msa0580470:CDS
ATAAGTTCATTCTTGCCCAA+TGG 0.570627 4_1:-85555604 Msa0580470:three_prime_UTR
TTGTGCAGGTTCAAGAAGCA+AGG 0.572071 4_1:-85558555 Msa0580470:intron
AGTTTAGTTTCTCCTGGACA+AGG 0.572083 4_1:+85556808 None:intergenic
CACAACCATCTGTAGCTGTA+GGG 0.573415 4_1:-85563958 Msa0580470:CDS
GGCGAGGGTTTAAGGGTGAA+AGG 0.578504 4_1:+85566469 None:intergenic
TTCCACCCTACAGCTACAGA+TGG 0.578527 4_1:+85563953 None:intergenic
CAACACTGTCCGACTCTCCA+AGG 0.579908 4_1:-85566564 Msa0580470:five_prime_UTR
ATGGTGACGGTCTCTTTAGA+GGG 0.579960 4_1:-85565969 Msa0580470:intron
AGATGGAAGTTGGTGGTGGA+AGG 0.580738 4_1:-85562254 Msa0580470:CDS
CAGAGAAATTGTGAATGGCG+AGG 0.582893 4_1:+85566453 None:intergenic
ATTGAGATGGAAGTTGGTGG+TGG 0.583627 4_1:-85562258 Msa0580470:CDS
AGAGAAATTGTGAATGGCGA+GGG 0.585703 4_1:+85566454 None:intergenic
TTTGCGGATTTCTTCGTCGG+AGG 0.586012 4_1:+85566311 None:intergenic
GTGCGCTGGTTGTATGTAGT+AGG 0.589823 4_1:-85562210 Msa0580470:CDS
CATTTGCAGGGCGTAACAGA+AGG 0.590996 4_1:+85556429 None:intergenic
CGTCGGAGGATTCGGGTGAG+AGG 0.591705 4_1:+85566325 None:intergenic
GAGATTTGAATTCTGTCGTG+GGG 0.593603 4_1:-85561280 Msa0580470:CDS
TATGTAGAGTACGCTCATGC+CGG 0.594747 4_1:-85556781 Msa0580470:CDS
AACGCTCCAGTAGCAAACAT+AGG 0.595428 4_1:+85560462 None:intergenic
CCGCAGTATTTAGATGGTGA+CGG 0.596124 4_1:-85565982 Msa0580470:CDS
ACGCTCCAGTAGCAAACATA+GGG 0.598281 4_1:+85560463 None:intergenic
GTGGCAGCATCTTTCATGAG+AGG 0.598579 4_1:+85566240 None:intergenic
TGATACCCCAGGGCATCCAC+AGG 0.599069 4_1:-85556621 Msa0580470:CDS
CAAATTAGCCAAAATCGTCC+CGG 0.603920 4_1:+85566011 None:intergenic
AACCATCTGTAGCTGTAGGG+TGG 0.613280 4_1:-85563955 Msa0580470:CDS
TAAGCAGAAGGCTCTAGAGA+AGG 0.614702 4_1:-85559752 Msa0580470:CDS
CCTTAAAAGGAATAAGCAGA+AGG 0.619877 4_1:-85559764 Msa0580470:CDS
TGAACAATTAGTGATACCCC+AGG 0.624180 4_1:-85556632 Msa0580470:CDS
GATGATGCGATTGAAGGTAG+TGG 0.628517 4_1:+85566404 None:intergenic
CTCCAAGGAAGAGAAGAGAG+TGG 0.633662 4_1:-85566549 Msa0580470:five_prime_UTR
TGTGCAGGTTCAAGAAGCAA+GGG 0.640879 4_1:-85558554 Msa0580470:intron
TTACCTCAAGTATGTAAACA+AGG 0.641730 4_1:+85556545 None:intergenic
TACCGAGCTGATGTCTCGAA+AGG 0.642389 4_1:+85563645 None:intergenic
TAATTGGAGTGCAGACATCA+CGG 0.643892 4_1:-85564719 Msa0580470:intron
AACAAGCAATTAGAAACGGG+TGG 0.644799 4_1:-85558478 Msa0580470:CDS
GAGTGGACCAAGATACCTTG+TGG 0.647070 4_1:-85566532 Msa0580470:five_prime_UTR
GTAAACAAGGCAAAACTGCA+GGG 0.654050 4_1:+85556558 None:intergenic
AAGTACCTTCACATCTGCAG+TGG 0.655070 4_1:+85563907 None:intergenic
ACTGTTAGATGGAATGCAAG+AGG 0.659226 4_1:-85556512 Msa0580470:three_prime_UTR
CAGAAGGCTCTAGAGAAGGA+GGG 0.666625 4_1:-85559748 Msa0580470:CDS
AAAATTGTGGTACAGCAGCA+GGG 0.666912 4_1:+85556338 None:intergenic
TCATGCCGGCAATCAACACA+AGG 0.679169 4_1:-85556767 Msa0580470:intron
TATATCCTGTGGATGCCCTG+GGG 0.680955 4_1:+85556616 None:intergenic
GTCCTTTCGAGACATCAGCT+CGG 0.682396 4_1:-85563647 Msa0580470:CDS
TCCCAAACAAAACATCCACA+AGG 0.691678 4_1:+85566517 None:intergenic
AAGGGAACATGAGAAGATGG+TGG 0.692220 4_1:-85566049 Msa0580470:CDS
AGATTTGAATTCTGTCGTGG+GGG 0.694309 4_1:-85561279 Msa0580470:CDS
TCATTAACTAGAAAATTCAG+AGG 0.697331 4_1:+85558346 None:intergenic
GAACAATTAGTGATACCCCA+GGG 0.697876 4_1:-85556631 Msa0580470:CDS
GCAGTTGAAGGACATCAAGG+TGG 0.714956 4_1:-85564825 Msa0580470:CDS
TTGTTGATGCAGCTTCACGA+AGG 0.717990 4_1:-85556865 Msa0580470:intron
AACTCGTTGAAAATTCTCAG+TGG 0.720687 4_1:+85566221 None:intergenic
GCATTGGAGGAAGATTTGGG+AGG 0.723138 4_1:-85563590 Msa0580470:intron
CCGTCACCATCTAAATACTG+CGG 0.736185 4_1:+85565982 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATATATATATATAT+AGG - chr4_1:85564634-85564653 Msa0580470:intron 0.0%
!!! TTTCTCTTAATAATTTTTAT+AGG + chr4_1:85556481-85556500 None:intergenic 10.0%
!!! AAACTTTTTATTTATAAAAG+TGG + chr4_1:85556972-85556991 None:intergenic 10.0%
!! GACAAATTAAAAATATAATA+TGG + chr4_1:85560536-85560555 None:intergenic 10.0%
!! CATGAATAAAAAATATTTAT+AGG + chr4_1:85561727-85561746 None:intergenic 10.0%
!! CAAATTAATTAAAAACTATA+TGG - chr4_1:85561823-85561842 Msa0580470:intron 10.0%
!!! TATTTTTTTTCATTCATTAT+AGG + chr4_1:85562516-85562535 None:intergenic 10.0%
!! TATATATATATATATAAGTC+AGG - chr4_1:85563854-85563873 Msa0580470:intron 10.0%
!!! TGATTTTTTTTTAATTACTT+TGG + chr4_1:85564211-85564230 None:intergenic 10.0%
!! ATATATATATATATATAGGA+TGG - chr4_1:85564656-85564675 Msa0580470:intron 10.0%
!!! TTTTTTAAATAATTGAGGAA+GGG + chr4_1:85556996-85557015 None:intergenic 15.0%
!!! TTTTTTTAAATAATTGAGGA+AGG + chr4_1:85556997-85557016 None:intergenic 15.0%
!!! AAATTATATTTTAAGGAACT+TGG + chr4_1:85557910-85557929 None:intergenic 15.0%
!!! TACAACTTTTAATCAATATA+TGG + chr4_1:85558205-85558224 None:intergenic 15.0%
!! TTGATTAGAATTAAATTGAA+AGG - chr4_1:85558980-85558999 Msa0580470:intron 15.0%
!! TGATTAGAATTAAATTGAAA+GGG - chr4_1:85558981-85559000 Msa0580470:intron 15.0%
!! AAATTTGAAGATATTGATAA+AGG - chr4_1:85559171-85559190 Msa0580470:intron 15.0%
!!! TTTTAAATTAAACAAGAGTT+GGG - chr4_1:85559602-85559621 Msa0580470:intron 15.0%
!!! CTATCTAAAATAAAATTGTT+AGG + chr4_1:85561037-85561056 None:intergenic 15.0%
!!! CTAACAATTTTATTTTAGAT+AGG - chr4_1:85561035-85561054 Msa0580470:intron 15.0%
!!! TGCAATTATTTCTTTAATTT+TGG + chr4_1:85561091-85561110 None:intergenic 15.0%
!! CAAGTTTGATTATATTAAAA+TGG - chr4_1:85561114-85561133 Msa0580470:intron 15.0%
!! TCTAAATTAGCTAAATATTA+GGG + chr4_1:85562183-85562202 None:intergenic 15.0%
!! ATCTAAATTAGCTAAATATT+AGG + chr4_1:85562184-85562203 None:intergenic 15.0%
!! AATAAATAATGAAAAAGGAA+CGG - chr4_1:85562621-85562640 Msa0580470:intron 15.0%
!!! GGACATTTTATTTTATAATT+GGG - chr4_1:85562642-85562661 Msa0580470:intron 15.0%
!! GAAAGAAATATATAAACAAA+TGG - chr4_1:85562691-85562710 Msa0580470:intron 15.0%
!!! GTATGATTTATTAGTTTTAA+CGG + chr4_1:85563927-85563946 None:intergenic 15.0%
!! GTTAAAACTAATAAATCATA+CGG - chr4_1:85563926-85563945 Msa0580470:CDS 15.0%
!! TCATTATAAAAATTGGATAT+TGG - chr4_1:85563949-85563968 Msa0580470:CDS 15.0%
!!! TTAAAATTGAAATTTTGAGA+TGG - chr4_1:85564723-85564742 Msa0580470:CDS 15.0%
!!! CTAATTAAATTCTTTTAAAC+AGG - chr4_1:85565370-85565389 Msa0580470:intron 15.0%
!! TAAAAAATTTATCAATGTTG+CGG + chr4_1:85566115-85566134 None:intergenic 15.0%
!!! AGAAATAATACTCATTTTTT+AGG - chr4_1:85566197-85566216 Msa0580470:CDS 15.0%
!! TTAAAACCATTCTAACAAAA+AGG + chr4_1:85556339-85556358 None:intergenic 20.0%
!!! GTTTATCTTATAGTTTTTCT+AGG + chr4_1:85556580-85556599 None:intergenic 20.0%
!!! TTTTTATAGAAATATGTTCG+TGG - chr4_1:85556852-85556871 Msa0580470:CDS 20.0%
!!! TTTTTAAATAATTGAGGAAG+GGG + chr4_1:85556995-85557014 None:intergenic 20.0%
!! AACATTCAAATAAAATCCTA+AGG + chr4_1:85557093-85557112 None:intergenic 20.0%
!! TTAGTATAGGAAAAGATAAA+AGG + chr4_1:85558343-85558362 None:intergenic 20.0%
!!! TACCTTCTTTTTTATCTTAA+TGG - chr4_1:85558660-85558679 Msa0580470:intron 20.0%
!! TACCATTAAGATAAAAAAGA+AGG + chr4_1:85558665-85558684 None:intergenic 20.0%
!!! ATTGCTGTAGATTTTTTTAA+AGG - chr4_1:85558704-85558723 Msa0580470:intron 20.0%
!!! AGATTTTTTTAAAGGTCAAT+AGG - chr4_1:85558712-85558731 Msa0580470:intron 20.0%
!!! GATTTTTTTAAAGGTCAATA+GGG - chr4_1:85558713-85558732 Msa0580470:intron 20.0%
!! AACTGCAAATATATAAAAGA+TGG - chr4_1:85558901-85558920 Msa0580470:intron 20.0%
!!! AAGATATTGATAAAGGTATT+AGG - chr4_1:85559178-85559197 Msa0580470:intron 20.0%
!! ATTAAACATGAAATTTAGAC+TGG - chr4_1:85559488-85559507 Msa0580470:intron 20.0%
!! CATTTCTAAATTCTAACTAT+TGG + chr4_1:85559519-85559538 None:intergenic 20.0%
!! TAGTTAGAATTTAGAAATGT+AGG - chr4_1:85559520-85559539 Msa0580470:intron 20.0%
!! AAAGATATATCATTTATCTC+TGG + chr4_1:85559585-85559604 None:intergenic 20.0%
!!! CTTTTAAATTAAACAAGAGT+TGG - chr4_1:85559601-85559620 Msa0580470:intron 20.0%
!!! ACTCATTGACATTAAATTTT+TGG - chr4_1:85559699-85559718 Msa0580470:intron 20.0%
!! AATCATCAAAAAGTTTATCT+GGG - chr4_1:85560441-85560460 Msa0580470:CDS 20.0%
!!! TAAGAGCAAAAGTTATTTTT+TGG + chr4_1:85560485-85560504 None:intergenic 20.0%
!! ATATGGCTTAATTCAAAATT+TGG + chr4_1:85560519-85560538 None:intergenic 20.0%
!!! TTTTTAATTTGTCACATTGA+TGG - chr4_1:85560543-85560562 Msa0580470:intron 20.0%
!! TACAAGAAATCATTAACAAA+GGG + chr4_1:85560697-85560716 None:intergenic 20.0%
!! ATACAAGAAATCATTAACAA+AGG + chr4_1:85560698-85560717 None:intergenic 20.0%
!!! TTCAGATGTTTTATATATGA+TGG - chr4_1:85560872-85560891 Msa0580470:intron 20.0%
!!! AGTGTAGATTTTAACTTAAA+AGG - chr4_1:85561162-85561181 Msa0580470:intron 20.0%
!!! GTGTAGATTTTAACTTAAAA+GGG - chr4_1:85561163-85561182 Msa0580470:intron 20.0%
!!! TGTAGATTTTAACTTAAAAG+GGG - chr4_1:85561164-85561183 Msa0580470:intron 20.0%
!!! TTAGTATGTTTTACATAAGA+AGG - chr4_1:85561236-85561255 Msa0580470:intron 20.0%
!!! GTGTATATTTTAACAAAAGA+GGG - chr4_1:85561265-85561284 Msa0580470:CDS 20.0%
!!! TGTATATTTTAACAAAAGAG+GGG - chr4_1:85561266-85561285 Msa0580470:CDS 20.0%
!!! TATTTTTCAGCAATTACATT+AGG + chr4_1:85561426-85561445 None:intergenic 20.0%
!!! AGATATTTTGTGATAAAAAG+TGG + chr4_1:85562060-85562079 None:intergenic 20.0%
!!! TTTTTATCACAAAATATCTC+TGG - chr4_1:85562061-85562080 Msa0580470:intron 20.0%
!!! TTATTCCTTTTAAGGTAATA+CGG + chr4_1:85562272-85562291 None:intergenic 20.0%
!! TGATAACTACGTTAATAATT+TGG - chr4_1:85562455-85562474 Msa0580470:intron 20.0%
!! GATAACTACGTTAATAATTT+GGG - chr4_1:85562456-85562475 Msa0580470:intron 20.0%
!!! TTTTTTCATTCATTATAGGA+AGG + chr4_1:85562512-85562531 None:intergenic 20.0%
!! ATGAAAAAAAATACTGTATC+AGG - chr4_1:85562523-85562542 Msa0580470:intron 20.0%
!!! CGGACATTTTATTTTATAAT+TGG - chr4_1:85562641-85562660 Msa0580470:intron 20.0%
!! TTAAAAACCCTAAAAAACAT+AGG + chr4_1:85562864-85562883 None:intergenic 20.0%
!!! AATTTTCTAGTTAATGATTC+TGG - chr4_1:85563701-85563720 Msa0580470:intron 20.0%
!!! GTTTAAAATATATCCACATA+AGG + chr4_1:85564512-85564531 None:intergenic 20.0%
!! TATATATATATAGGATGGAA+TGG - chr4_1:85564661-85564680 Msa0580470:intron 20.0%
!!! TACTTTTCTGTTTAATTTCT+TGG - chr4_1:85564777-85564796 Msa0580470:CDS 20.0%
!! TGTTATGAAAAATATACAAG+TGG + chr4_1:85565006-85565025 None:intergenic 20.0%
!!! ATCATTAAATAGGATTTTAC+TGG + chr4_1:85565084-85565103 None:intergenic 20.0%
!!! TTTTTACTGTTTAAGAAGTT+TGG - chr4_1:85565312-85565331 Msa0580470:intron 20.0%
!!! AAATTCTTTTAAACAGGTAT+TGG - chr4_1:85565376-85565395 Msa0580470:intron 20.0%
!! TAATATTTCTTTATATCCTG+TGG + chr4_1:85565439-85565458 None:intergenic 20.0%
!!! AATTATTTTGTACTGTTAGA+TGG - chr4_1:85565518-85565537 Msa0580470:intron 20.0%
!! ACAATTGTGATGTATATATT+CGG + chr4_1:85565820-85565839 None:intergenic 20.0%
!! TGATAAGAAATTGAAATTCA+TGG + chr4_1:85565961-85565980 None:intergenic 20.0%
!! AATTTGTAGTTCATTCAATA+CGG - chr4_1:85565989-85566008 Msa0580470:CDS 20.0%
!!! TTTCTTCTTCTTAATTTTCA+TGG + chr4_1:85566064-85566083 None:intergenic 20.0%
!! AAAAAATGAAAATTTAGTGC+AGG - chr4_1:85566325-85566344 Msa0580470:CDS 20.0%
!!! TTTCATTTAAGGTTTGTTAT+TGG - chr4_1:85566467-85566486 Msa0580470:five_prime_UTR 20.0%
! AGACAGGTTTATGATATTTA+TGG - chr4_1:85555879-85555898 Msa0580470:intron 25.0%
! GGTTTATGATATTTATGGTA+TGG - chr4_1:85555884-85555903 Msa0580470:intron 25.0%
! TATGATATTTATGGTATGGA+AGG - chr4_1:85555888-85555907 Msa0580470:intron 25.0%
! TTAAGAGAAACTACTAAGAA+AGG - chr4_1:85556491-85556510 Msa0580470:three_prime_UTR 25.0%
! TTAATGAGTTGTAGATTAGA+CGG - chr4_1:85556522-85556541 Msa0580470:three_prime_UTR 25.0%
! TAAACTATTAAGAAAAGTCC+AGG - chr4_1:85556595-85556614 Msa0580470:three_prime_UTR 25.0%
! AAACTATTAAGAAAAGTCCA+GGG - chr4_1:85556596-85556615 Msa0580470:exon 25.0%
! TTGCAATAGTTTATCGATAT+TGG - chr4_1:85556749-85556768 Msa0580470:intron 25.0%
! AAAATTCAATCAAGAACACA+GGG + chr4_1:85556836-85556855 None:intergenic 25.0%
! AAAAATTCAATCAAGAACAC+AGG + chr4_1:85556837-85556856 None:intergenic 25.0%
!! CATTTTAAATTCTCTTAGGT+GGG + chr4_1:85556939-85556958 None:intergenic 25.0%
!! TGACCATTTTAAATTCTCTT+AGG + chr4_1:85556943-85556962 None:intergenic 25.0%
! TCAAATAAAATCCTAAGGAT+GGG + chr4_1:85557088-85557107 None:intergenic 25.0%
! TTCAAATAAAATCCTAAGGA+TGG + chr4_1:85557089-85557108 None:intergenic 25.0%
! AAATTGTACATAACTTTGTG+CGG - chr4_1:85557610-85557629 Msa0580470:intron 25.0%
!! GATCGATTTAATGATAACTA+TGG - chr4_1:85557658-85557677 Msa0580470:intron 25.0%
! TAAGCAACATACTAAATTCA+AGG - chr4_1:85557770-85557789 Msa0580470:intron 25.0%
! AAGCAACATACTAAATTCAA+GGG - chr4_1:85557771-85557790 Msa0580470:intron 25.0%
!! TGGTTTAGAATTTCTAAATG+TGG - chr4_1:85557817-85557836 Msa0580470:intron 25.0%
!! GGTTTAGAATTTCTAAATGT+GGG - chr4_1:85557818-85557837 Msa0580470:intron 25.0%
!! GTTTAGAATTTCTAAATGTG+GGG - chr4_1:85557819-85557838 Msa0580470:intron 25.0%
!! TTTAGAATTTCTAAATGTGG+GGG - chr4_1:85557820-85557839 Msa0580470:intron 25.0%
!! TAAGACCATTATTCTAAAGA+TGG + chr4_1:85558289-85558308 None:intergenic 25.0%
! GTTGAGAAAGAATTTAGTAT+AGG + chr4_1:85558356-85558375 None:intergenic 25.0%
!! AAAAAAGAAGGTATGAACAA+TGG + chr4_1:85558653-85558672 None:intergenic 25.0%
!!! ATTCCTAATCGATTTTCAAA+AGG + chr4_1:85558765-85558784 None:intergenic 25.0%
!!! TTTTGAAAATCGATTAGGAA+TGG - chr4_1:85558764-85558783 Msa0580470:intron 25.0%
! CTCTTATTATTCAATGTCAA+GGG + chr4_1:85558806-85558825 None:intergenic 25.0%
! CATAAAAACAAAAGAAACGA+TGG + chr4_1:85558856-85558875 None:intergenic 25.0%
!!! GTTTCTTTTGTTTTTATGCT+GGG - chr4_1:85558858-85558877 Msa0580470:intron 25.0%
!!! TTTCTTTTGTTTTTATGCTG+GGG - chr4_1:85558859-85558878 Msa0580470:intron 25.0%
! ATCTAAATTTCCCTCTTTAT+GGG - chr4_1:85558925-85558944 Msa0580470:intron 25.0%
! TTTATGGGAATCAAAATGAA+AGG - chr4_1:85558940-85558959 Msa0580470:intron 25.0%
! AGAATTAAATTGAAAGGGAA+AGG - chr4_1:85558986-85559005 Msa0580470:intron 25.0%
!! CATTGAACATTTTTCTATTG+AGG - chr4_1:85559059-85559078 Msa0580470:intron 25.0%
! TTGAAGTAAAATAGAGCATA+TGG - chr4_1:85559221-85559240 Msa0580470:intron 25.0%
! AAAAGTAAGATTGTGAATTG+AGG - chr4_1:85559368-85559387 Msa0580470:intron 25.0%
!!! GTTTGGGATATAAATTTTCT+TGG + chr4_1:85559549-85559568 None:intergenic 25.0%
! TAAACCGCTATAATTAATCA+CGG + chr4_1:85559923-85559942 None:intergenic 25.0%
! TTTCTAACACACTCTTTAAA+AGG - chr4_1:85560054-85560073 Msa0580470:intron 25.0%
!! TTCTAACACACTCTTTAAAA+GGG - chr4_1:85560055-85560074 Msa0580470:intron 25.0%
!!! CAGATAAACTTTTTGATGAT+TGG + chr4_1:85560442-85560461 None:intergenic 25.0%
! CAATCATCAAAAAGTTTATC+TGG - chr4_1:85560440-85560459 Msa0580470:CDS 25.0%
! CTTAATTCAAAATTTGGATG+GGG + chr4_1:85560513-85560532 None:intergenic 25.0%
! GCTTAATTCAAAATTTGGAT+GGG + chr4_1:85560514-85560533 None:intergenic 25.0%
! AATCTTTAAATTTCCATAGG+TGG + chr4_1:85560586-85560605 None:intergenic 25.0%
! TGGAATCTTTAAATTTCCAT+AGG + chr4_1:85560589-85560608 None:intergenic 25.0%
!! ACCATTTATTTAACCTTTTC+AGG - chr4_1:85560728-85560747 Msa0580470:intron 25.0%
!! CCATTTATTTAACCTTTTCA+GGG - chr4_1:85560729-85560748 Msa0580470:intron 25.0%
! ATAAAAGTCAAATCCCAAAA+TGG + chr4_1:85560853-85560872 None:intergenic 25.0%
! TCATATCTCATTTGATCTAA+TGG + chr4_1:85560938-85560957 None:intergenic 25.0%
!!! GTTTTTCTTTTAATCGACTT+TGG - chr4_1:85561057-85561076 Msa0580470:intron 25.0%
!! ATGGACGTAAGATTTTATTA+AGG - chr4_1:85561133-85561152 Msa0580470:intron 25.0%
!! TGGACGTAAGATTTTATTAA+GGG - chr4_1:85561134-85561153 Msa0580470:intron 25.0%
!!! GGTGTATATTTTAACAAAAG+AGG - chr4_1:85561264-85561283 Msa0580470:CDS 25.0%
! TGTAATTTAAGCAACTCTTA+GGG - chr4_1:85561296-85561315 Msa0580470:intron 25.0%
! AGAAAGGGAAATTTATTAAC+AGG + chr4_1:85561924-85561943 None:intergenic 25.0%
! GTACACTCAAAATTTAGAAA+GGG + chr4_1:85561939-85561958 None:intergenic 25.0%
! ATCAAGATTTCTGTAACTAA+TGG + chr4_1:85562035-85562054 None:intergenic 25.0%
! TTAAACCGTATTACCTTAAA+AGG - chr4_1:85562264-85562283 Msa0580470:CDS 25.0%
! AAAGATTAACACTTCCTAAA+TGG - chr4_1:85562717-85562736 Msa0580470:intron 25.0%
!!! ATAAACAGCCTATGTTTTTT+AGG - chr4_1:85562853-85562872 Msa0580470:intron 25.0%
!!! TAAACAGCCTATGTTTTTTA+GGG - chr4_1:85562854-85562873 Msa0580470:intron 25.0%
!! TTTTTACTAGAAACCCAAAT+GGG + chr4_1:85562887-85562906 None:intergenic 25.0%
!!! TTTTTTACTAGAAACCCAAA+TGG + chr4_1:85562888-85562907 None:intergenic 25.0%
! CTAGTAAAAAAGAAACATGT+TGG - chr4_1:85562897-85562916 Msa0580470:intron 25.0%
!!! TTTTTAGTTTTTTTCCGCTA+TGG - chr4_1:85562969-85562988 Msa0580470:intron 25.0%
! ATACCTAGATATGAAATGAA+AGG + chr4_1:85563149-85563168 None:intergenic 25.0%
! TACAACAAAATGTAGCTAAT+AGG - chr4_1:85563534-85563553 Msa0580470:intron 25.0%
! AAGAAACAAGCAATTAGAAA+CGG - chr4_1:85563559-85563578 Msa0580470:intron 25.0%
! TCATTAACTAGAAAATTCAG+AGG + chr4_1:85563698-85563717 None:intergenic 25.0%
! CATACGGTCATTATAAAAAT+TGG - chr4_1:85563942-85563961 Msa0580470:CDS 25.0%
! AAAAATTGGATATTGGAACA+CGG - chr4_1:85563956-85563975 Msa0580470:CDS 25.0%
! CAATGAATATTCATAAGTGA+TGG + chr4_1:85564088-85564107 None:intergenic 25.0%
! CATCACTTATGAATATTCAT+TGG - chr4_1:85564086-85564105 Msa0580470:intron 25.0%
!!! GAAAAATTTGTTGTCACATT+AGG + chr4_1:85564148-85564167 None:intergenic 25.0%
!! TGTGACAACAAATTTTTCTA+TGG - chr4_1:85564150-85564169 Msa0580470:intron 25.0%
! ATGATCGTAGAAAATTGTAT+GGG - chr4_1:85564266-85564285 Msa0580470:intron 25.0%
! ACACGATCGATTAAATTTAA+CGG - chr4_1:85564533-85564552 Msa0580470:CDS 25.0%
! TAAATTTAACGGTTGAGATT+TGG - chr4_1:85564544-85564563 Msa0580470:CDS 25.0%
! AGTAACTGAAAGTTAAGTAT+AGG - chr4_1:85564750-85564769 Msa0580470:CDS 25.0%
! GTAACTGAAAGTTAAGTATA+GGG - chr4_1:85564751-85564770 Msa0580470:CDS 25.0%
!!! AGATTTATGTTCTAAAGATG+TGG - chr4_1:85564840-85564859 Msa0580470:CDS 25.0%
! CCTCAGAAATATCATTAAAT+AGG + chr4_1:85565094-85565113 None:intergenic 25.0%
!! CCTATTTAATGATATTTCTG+AGG - chr4_1:85565091-85565110 Msa0580470:intron 25.0%
!!! ATTTTGGTGAAGTTACAATA+TGG + chr4_1:85565117-85565136 None:intergenic 25.0%
!! ACTTCACCAAAATTAAGTTT+TGG - chr4_1:85565124-85565143 Msa0580470:intron 25.0%
!! CTTCACCAAAATTAAGTTTT+GGG - chr4_1:85565125-85565144 Msa0580470:intron 25.0%
! AAAAAATTAAAGATACCCAC+TGG + chr4_1:85565579-85565598 None:intergenic 25.0%
! GTTGCAATAAATTGTGTATA+CGG + chr4_1:85566028-85566047 None:intergenic 25.0%
! AAAACTCCATGAAAATTGAA+AGG - chr4_1:85566087-85566106 Msa0580470:CDS 25.0%
! AAACTCCATGAAAATTGAAA+GGG - chr4_1:85566088-85566107 Msa0580470:CDS 25.0%
!! ATGTTCCTTTTATTGTTCAT+TGG - chr4_1:85566396-85566415 Msa0580470:exon 25.0%
! AAGAATGAACTTATATGGTT+GGG + chr4_1:85566431-85566450 None:intergenic 25.0%
! AAATGAAAATTACAGCCATT+GGG + chr4_1:85566455-85566474 None:intergenic 25.0%
! TAAATGAAAATTACAGCCAT+TGG + chr4_1:85566456-85566475 None:intergenic 25.0%
!! ATGGCTGTAATTTTCATTTA+AGG - chr4_1:85566456-85566475 Msa0580470:five_prime_UTR 25.0%
! TTTTGCAGAGAAATTGTGAA+TGG + chr4_1:85555596-85555615 None:intergenic 30.0%
TCATAAACCTGTCTCTTATT+CGG + chr4_1:85555873-85555892 None:intergenic 30.0%
GATAAGCTAGTGTATTGAAA+TGG - chr4_1:85556221-85556240 Msa0580470:intron 30.0%
! TGCATACCTTTTTGTTAGAA+TGG - chr4_1:85556330-85556349 Msa0580470:intron 30.0%
GATAGTAATCAAATCACTAG+AGG - chr4_1:85556544-85556563 Msa0580470:three_prime_UTR 30.0%
ATGGATATGATAGAACATTG+CGG - chr4_1:85556634-85556653 Msa0580470:CDS 30.0%
ATCGATAAACTATTGCAACA+AGG + chr4_1:85556747-85556766 None:intergenic 30.0%
! CCATTTTAAATTCTCTTAGG+TGG + chr4_1:85556940-85556959 None:intergenic 30.0%
CCACCTAAGAGAATTTAAAA+TGG - chr4_1:85556937-85556956 Msa0580470:intron 30.0%
GAAGCAATTATTTAACTGTC+AGG + chr4_1:85557035-85557054 None:intergenic 30.0%
TTGTCAAAACGAAATGTTGT+TGG - chr4_1:85557177-85557196 Msa0580470:intron 30.0%
TGTCAAAACGAAATGTTGTT+GGG - chr4_1:85557178-85557197 Msa0580470:intron 30.0%
ATTAAGTCATCAACTTTCTG+AGG - chr4_1:85557257-85557276 Msa0580470:intron 30.0%
ATAGAATTTATTGCTTCAGC+CGG - chr4_1:85557288-85557307 Msa0580470:intron 30.0%
GAAACACATAAATCATCACT+AGG + chr4_1:85557398-85557417 None:intergenic 30.0%
! TTAACAATGTCTTTGAGAGA+TGG - chr4_1:85557470-85557489 Msa0580470:intron 30.0%
TTGCTTATACAAAGTAATCC+TGG + chr4_1:85557757-85557776 None:intergenic 30.0%
TACTAAATTCAAGGGAACAA+AGG - chr4_1:85557779-85557798 Msa0580470:intron 30.0%
GTCAACAAAGTTTGTATGTT+TGG - chr4_1:85557872-85557891 Msa0580470:intron 30.0%
! CTGGCGCAAATTATATTTTA+AGG + chr4_1:85557917-85557936 None:intergenic 30.0%
! AATATAATTTGCGCCAGAAT+TGG - chr4_1:85557920-85557939 Msa0580470:intron 30.0%
ATTTCAGATACAACTCATGT+TGG - chr4_1:85558057-85558076 Msa0580470:intron 30.0%
TTTCAGATACAACTCATGTT+GGG - chr4_1:85558058-85558077 Msa0580470:intron 30.0%
ATATATGGTCGTAAAATGTC+CGG + chr4_1:85558190-85558209 None:intergenic 30.0%
!! TGCTTCCATCTTTAGAATAA+TGG - chr4_1:85558281-85558300 Msa0580470:intron 30.0%
! CGATTTTCTTCTAAATCTCA+TGG - chr4_1:85558426-85558445 Msa0580470:CDS 30.0%
GGAAACAGAGTAAAATTAGT+TGG + chr4_1:85558632-85558651 None:intergenic 30.0%
CCTCTTATTATTCAATGTCA+AGG + chr4_1:85558807-85558826 None:intergenic 30.0%
CCTTGACATTGAATAATAAG+AGG - chr4_1:85558804-85558823 Msa0580470:intron 30.0%
!!! CGTTTCTTTTGTTTTTATGC+TGG - chr4_1:85558857-85558876 Msa0580470:intron 30.0%
CATCTAAATTTCCCTCTTTA+TGG - chr4_1:85558924-85558943 Msa0580470:intron 30.0%
!!! CATTTTGATTCCCATAAAGA+GGG + chr4_1:85558938-85558957 None:intergenic 30.0%
!!! TCATTTTGATTCCCATAAAG+AGG + chr4_1:85558939-85558958 None:intergenic 30.0%
CATTCAGCATATATAAGAGA+TGG - chr4_1:85559087-85559106 Msa0580470:intron 30.0%
! ATATATAAGAGATGGTGTCA+TGG - chr4_1:85559095-85559114 Msa0580470:intron 30.0%
!!! TAACATTTTAAAACGCCTTG+TGG + chr4_1:85559308-85559327 None:intergenic 30.0%
! TTAAATACTTGATAGCCTGT+AGG - chr4_1:85559646-85559665 Msa0580470:intron 30.0%
AAAGACAAGAACGATAAACA+TGG + chr4_1:85559896-85559915 None:intergenic 30.0%
GTTTCCGTGATTAATTATAG+CGG - chr4_1:85559916-85559935 Msa0580470:intron 30.0%
GTGATTAATTATAGCGGTTT+AGG - chr4_1:85559922-85559941 Msa0580470:intron 30.0%
!!! TTACCCTGTTTTTTACACAT+GGG - chr4_1:85560154-85560173 Msa0580470:intron 30.0%
! TCAAAGAGTGTGTTAGAAAA+GGG + chr4_1:85560239-85560258 None:intergenic 30.0%
! ATCAAAGAGTGTGTTAGAAA+AGG + chr4_1:85560240-85560259 None:intergenic 30.0%
TTTCTAACACACTCTTTGAT+TGG - chr4_1:85560240-85560259 Msa0580470:intron 30.0%
TAGGTCCCACAATATTTATA+CGG + chr4_1:85560303-85560322 None:intergenic 30.0%
!!! AACTGCATAGTATTTTAGCA+GGG + chr4_1:85560404-85560423 None:intergenic 30.0%
!!! AAACTGCATAGTATTTTAGC+AGG + chr4_1:85560405-85560424 None:intergenic 30.0%
GGCTTAATTCAAAATTTGGA+TGG + chr4_1:85560515-85560534 None:intergenic 30.0%
CCCTGAAAAGGTTAAATAAA+TGG + chr4_1:85560732-85560751 None:intergenic 30.0%
ATCTCATTTGATCTAATGGT+GGG + chr4_1:85560934-85560953 None:intergenic 30.0%
TATCTCATTTGATCTAATGG+TGG + chr4_1:85560935-85560954 None:intergenic 30.0%
TCTCACATACACAAGTAAAA+TGG + chr4_1:85561010-85561029 None:intergenic 30.0%
! CGTAAGATTTTATTAAGGGA+TGG - chr4_1:85561138-85561157 Msa0580470:intron 30.0%
!!! AGATTTTAACTTAAAAGGGG+AGG - chr4_1:85561167-85561186 Msa0580470:intron 30.0%
!!! GATTTTAACTTAAAAGGGGA+GGG - chr4_1:85561168-85561187 Msa0580470:intron 30.0%
!!! ATTTTAACTTAAAAGGGGAG+GGG - chr4_1:85561169-85561188 Msa0580470:intron 30.0%
ATGTAATTCAAACTTCTCTC+AGG - chr4_1:85561193-85561212 Msa0580470:intron 30.0%
TGTAATTCAAACTTCTCTCA+GGG - chr4_1:85561194-85561213 Msa0580470:intron 30.0%
! TGTTTTACATAAGAAGGAAG+AGG - chr4_1:85561242-85561261 Msa0580470:intron 30.0%
! GTTTTACATAAGAAGGAAGA+GGG - chr4_1:85561243-85561262 Msa0580470:intron 30.0%
!!! ATATTTTAACAAAAGAGGGG+AGG - chr4_1:85561269-85561288 Msa0580470:CDS 30.0%
!!! TATTTTAACAAAAGAGGGGA+GGG - chr4_1:85561270-85561289 Msa0580470:CDS 30.0%
GTGTAATTTAAGCAACTCTT+AGG - chr4_1:85561295-85561314 Msa0580470:intron 30.0%
AGCAATTACATTAGGTTTCA+AGG + chr4_1:85561418-85561437 None:intergenic 30.0%
! ATCGTTTTACTTTGTTCTGA+AGG - chr4_1:85561614-85561633 Msa0580470:intron 30.0%
!! TAGCACTGACAATACTTAAA+CGG + chr4_1:85561681-85561700 None:intergenic 30.0%
TGCTGAATAATGATGACTTA+CGG + chr4_1:85561766-85561785 None:intergenic 30.0%
TAAGTCATCATTATTCAGCA+GGG - chr4_1:85561766-85561785 Msa0580470:intron 30.0%
GGGAAATTTATTAACAGGTA+TGG + chr4_1:85561919-85561938 None:intergenic 30.0%
GGTACACTCAAAATTTAGAA+AGG + chr4_1:85561940-85561959 None:intergenic 30.0%
AGTTATCTTGATTCTTCGTA+TGG + chr4_1:85562097-85562116 None:intergenic 30.0%
! GTTTGATTTATTGAACAGCT+TGG - chr4_1:85562149-85562168 Msa0580470:intron 30.0%
AAAAACTTCTACTCAGGTAT+GGG - chr4_1:85562316-85562335 Msa0580470:intron 30.0%
TTATGGTATTAACTGAGTAG+TGG - chr4_1:85562345-85562364 Msa0580470:intron 30.0%
! GTAAGATGGTCTATATTTTC+TGG - chr4_1:85562427-85562446 Msa0580470:intron 30.0%
!! TTTAGGGTTTTTAACCCATT+TGG - chr4_1:85562870-85562889 Msa0580470:intron 30.0%
! TTAGGGTTTTTAACCCATTT+GGG - chr4_1:85562871-85562890 Msa0580470:intron 30.0%
AAACAGAGAAAACTGAGATT+GGG + chr4_1:85562948-85562967 None:intergenic 30.0%
AAAACAGAGAAAACTGAGAT+TGG + chr4_1:85562949-85562968 None:intergenic 30.0%
AAAATCTTACTGTCCAACTA+TGG + chr4_1:85563042-85563061 None:intergenic 30.0%
TAAAGATTCACCATCCAAAT+AGG + chr4_1:85563089-85563108 None:intergenic 30.0%
TGAAATGAAAGGAGAACTAA+AGG + chr4_1:85563138-85563157 None:intergenic 30.0%
TCTCCTTTCATTTCATATCT+AGG - chr4_1:85563143-85563162 Msa0580470:intron 30.0%
! GACATGTAACTTCTAAAAAG+TGG + chr4_1:85563387-85563406 None:intergenic 30.0%
! AGACATATCAGATCTGTTTT+TGG - chr4_1:85563416-85563435 Msa0580470:intron 30.0%
AGAAACAAGCAATTAGAAAC+GGG - chr4_1:85563560-85563579 Msa0580470:intron 30.0%
AACAACTTGTATTCGTCAAA+TGG - chr4_1:85563629-85563648 Msa0580470:CDS 30.0%
!!! ACAAGTTTTGAATCTACTTC+AGG - chr4_1:85563653-85563672 Msa0580470:CDS 30.0%
TAATGATTCTGGTCAACTTA+AGG - chr4_1:85563712-85563731 Msa0580470:intron 30.0%
!! TAACTTTTTGAGAGAAAGCA+AGG + chr4_1:85563745-85563764 None:intergenic 30.0%
!!! TAGTTTTAACGGTTGAGATT+TGG + chr4_1:85563916-85563935 None:intergenic 30.0%
ATCGATGACTAAGAACATTT+AGG + chr4_1:85564119-85564138 None:intergenic 30.0%
!! AAATTTGTTGTCACATTAGG+AGG + chr4_1:85564145-85564164 None:intergenic 30.0%
ATGAAAAGAAACGCTAAAAG+GGG + chr4_1:85564248-85564267 None:intergenic 30.0%
CATGAAAAGAAACGCTAAAA+GGG + chr4_1:85564249-85564268 None:intergenic 30.0%
TCATGAAAAGAAACGCTAAA+AGG + chr4_1:85564250-85564269 None:intergenic 30.0%
CATGATCGTAGAAAATTGTA+TGG - chr4_1:85564265-85564284 Msa0580470:intron 30.0%
GTTAAATTTAATCGATCGTG+TGG + chr4_1:85564534-85564553 None:intergenic 30.0%
TTGGACTGACATTAAATTTC+TGG - chr4_1:85564796-85564815 Msa0580470:CDS 30.0%
TCTCTTTGACGTAAAACTTA+AGG + chr4_1:85564823-85564842 None:intergenic 30.0%
CAGAGTTGAGTTTAATGAAT+TGG + chr4_1:85564906-85564925 None:intergenic 30.0%
CTACTACTTGTGTGAATTAA+AGG - chr4_1:85565038-85565057 Msa0580470:intron 30.0%
AACAGAACTTCCATTATTTC+AGG + chr4_1:85565157-85565176 None:intergenic 30.0%
TGTAAAGAAATCAGGAATCA+TGG - chr4_1:85565199-85565218 Msa0580470:intron 30.0%
GTAAAGAAATCAGGAATCAT+GGG - chr4_1:85565200-85565219 Msa0580470:intron 30.0%
!!! TCTTTTAAACAGGTATTGGT+TGG - chr4_1:85565380-85565399 Msa0580470:intron 30.0%
TTACCTCAAGTATGTAAACA+AGG + chr4_1:85565499-85565518 None:intergenic 30.0%
AGCCAGAAAATTTGAATAGT+GGG - chr4_1:85565738-85565757 Msa0580470:intron 30.0%
GAAGAAGATGAAGAAAAAGT+GGG + chr4_1:85565939-85565958 None:intergenic 30.0%
ATTATGATAGATGCTAACGA+TGG + chr4_1:85566234-85566253 None:intergenic 30.0%
TGCAACCAATGAACAATAAA+AGG + chr4_1:85566404-85566423 None:intergenic 30.0%
CAAGAATGAACTTATATGGT+TGG + chr4_1:85566432-85566451 None:intergenic 30.0%
GAACTGATACAAAAATGTCA+CGG + chr4_1:85566542-85566561 None:intergenic 30.0%
! AAAACATCCACAAGGTATCT+TGG + chr4_1:85555519-85555538 None:intergenic 35.0%
!! TACCTTGTGGATGTTTTGTT+TGG - chr4_1:85555522-85555541 Msa0580470:three_prime_UTR 35.0%
!!! ACCTTGTGGATGTTTTGTTT+GGG - chr4_1:85555523-85555542 Msa0580470:three_prime_UTR 35.0%
GGAGAATTTGAGGGTTATTA+GGG + chr4_1:85555619-85555638 None:intergenic 35.0%
TGGAGAATTTGAGGGTTATT+AGG + chr4_1:85555620-85555639 None:intergenic 35.0%
!!! CAGAGTTTTGTTCCATCATT+GGG + chr4_1:85555662-85555681 None:intergenic 35.0%
!!! TCAGAGTTTTGTTCCATCAT+TGG + chr4_1:85555663-85555682 None:intergenic 35.0%
! CATCTTTCATGAGAGGATTT+TGG + chr4_1:85555797-85555816 None:intergenic 35.0%
AACTCGTTGAAAATTCTCAG+TGG + chr4_1:85555823-85555842 None:intergenic 35.0%
!! TTGAAATCTGGTTTGGAACT+TGG - chr4_1:85555912-85555931 Msa0580470:intron 35.0%
TCAGTTCGCTTATCAACTAT+CGG + chr4_1:85556149-85556168 None:intergenic 35.0%
! TTGATAAGCTAGCTTGTAGT+TGG - chr4_1:85556193-85556212 Msa0580470:intron 35.0%
TGTATTGAAATGGCAGTGTT+TGG - chr4_1:85556231-85556250 Msa0580470:intron 35.0%
GATAGTGAATGAGCTTATAG+CGG - chr4_1:85556400-85556419 Msa0580470:three_prime_UTR 35.0%
ATATCCAGTTCATTAATCCC+TGG + chr4_1:85556616-85556635 None:intergenic 35.0%
AGGGATTAATGAACTGGATA+TGG - chr4_1:85556615-85556634 Msa0580470:CDS 35.0%
! AAGCTTTATCCCATTAAGTG+GGG + chr4_1:85556683-85556702 None:intergenic 35.0%
! CAAGCTTTATCCCATTAAGT+GGG + chr4_1:85556684-85556703 None:intergenic 35.0%
! TCAAGCTTTATCCCATTAAG+TGG + chr4_1:85556685-85556704 None:intergenic 35.0%
AGTGTTAATGTACGCAATGA+TGG - chr4_1:85556778-85556797 Msa0580470:CDS 35.0%
AAACGAAATGTTGTTGGGAT+TGG - chr4_1:85557183-85557202 Msa0580470:intron 35.0%
TCCAATTAGTGAACGTAAAC+CGG + chr4_1:85557310-85557329 None:intergenic 35.0%
CGTTGAATCTTTCTAATGCA+TGG - chr4_1:85557495-85557514 Msa0580470:intron 35.0%
AGATGAGAAAGAAAAGTCCA+AGG + chr4_1:85557569-85557588 None:intergenic 35.0%
AAAATAATGTCCACTGCATC+TGG - chr4_1:85557716-85557735 Msa0580470:intron 35.0%
!! ACAAAGTAATCCTGGTTTTC+TGG + chr4_1:85557749-85557768 None:intergenic 35.0%
ACACTCATCTATTACAAGGT+CGG + chr4_1:85557854-85557873 None:intergenic 35.0%
GTTGACACTCATCTATTACA+AGG + chr4_1:85557858-85557877 None:intergenic 35.0%
ACACTTATATGAGCCAATTC+TGG + chr4_1:85557936-85557955 None:intergenic 35.0%
! GAATTGGCTCATATAAGTGT+TGG - chr4_1:85557936-85557955 Msa0580470:intron 35.0%
! AACTCACCAATGCTTTGAAT+TGG + chr4_1:85557962-85557981 None:intergenic 35.0%
!! ATTCAAAGCATTGGTGAGTT+TGG - chr4_1:85557962-85557981 Msa0580470:intron 35.0%
AATCTGTTTCATAATCCCTG+AGG + chr4_1:85557998-85558017 None:intergenic 35.0%
CAGGGATTATGAAACAGATT+TGG - chr4_1:85557998-85558017 Msa0580470:intron 35.0%
GCAAAATCAGTCATTTGTAC+CGG - chr4_1:85558168-85558187 Msa0580470:intron 35.0%
AAAATCTAAGTACGACGGTA+TGG + chr4_1:85558510-85558529 None:intergenic 35.0%
! ATACCGTCGTACTTAGATTT+TGG - chr4_1:85558509-85558528 Msa0580470:CDS 35.0%
TCACCAAAATCTAAGTACGA+CGG + chr4_1:85558515-85558534 None:intergenic 35.0%
TTGCAATGTCACTGTATTGT+TGG - chr4_1:85558543-85558562 Msa0580470:CDS 35.0%
!! CCTAATCGATTTTCAAAAGG+AGG + chr4_1:85558762-85558781 None:intergenic 35.0%
!! CCTCCTTTTGAAAATCGATT+AGG - chr4_1:85558759-85558778 Msa0580470:intron 35.0%
ACAAAAGAAACGATGGTGTA+TGG + chr4_1:85558849-85558868 None:intergenic 35.0%
AGAGAGAAATTTCAGTGTAG+AGG - chr4_1:85559259-85559278 Msa0580470:intron 35.0%
AGATGATACAGTCTCATCTT+AGG - chr4_1:85559409-85559428 Msa0580470:intron 35.0%
ACATGAAATTTAGACTGGAC+AGG - chr4_1:85559493-85559512 Msa0580470:intron 35.0%
!! TGGATCTCTCTTTAAGGTTT+GGG + chr4_1:85559565-85559584 None:intergenic 35.0%
TATCTCTGGATCTCTCTTTA+AGG + chr4_1:85559571-85559590 None:intergenic 35.0%
GGAAGAGCTAAAAGTTCAAA+TGG + chr4_1:85559763-85559782 None:intergenic 35.0%
!!! TTTTAGCTCTTCCATTGAGA+TGG - chr4_1:85559770-85559789 Msa0580470:CDS 35.0%
AATTATAGCGGTTTAGGCTT+AGG - chr4_1:85559928-85559947 Msa0580470:intron 35.0%
ATTATAGCGGTTTAGGCTTA+GGG - chr4_1:85559929-85559948 Msa0580470:intron 35.0%
CATGTGTAAAAAACAGGGTA+AGG + chr4_1:85560155-85560174 None:intergenic 35.0%
!!! CTTACCCTGTTTTTTACACA+TGG - chr4_1:85560153-85560172 Msa0580470:intron 35.0%
!!! TACCCTGTTTTTTACACATG+GGG - chr4_1:85560155-85560174 Msa0580470:intron 35.0%
! AAAGAGTGTGTTAGAAAAGG+GGG + chr4_1:85560237-85560256 None:intergenic 35.0%
! CAAAGAGTGTGTTAGAAAAG+GGG + chr4_1:85560238-85560257 None:intergenic 35.0%
TTGTTTCCACTGAATCATGT+TGG - chr4_1:85560275-85560294 Msa0580470:intron 35.0%
TTGGACCCGTATAAATATTG+TGG - chr4_1:85560294-85560313 Msa0580470:intron 35.0%
TGGACCCGTATAAATATTGT+GGG - chr4_1:85560295-85560314 Msa0580470:intron 35.0%
AGGTCCCACAATATTTATAC+GGG + chr4_1:85560302-85560321 None:intergenic 35.0%
TCTTTAGTATGGTGAGGAAA+AGG + chr4_1:85560344-85560363 None:intergenic 35.0%
! CAAAAAGTTTATCTGGGATG+TGG - chr4_1:85560447-85560466 Msa0580470:CDS 35.0%
AAATTTCCATAGGTGGAAAC+TGG + chr4_1:85560579-85560598 None:intergenic 35.0%
GTAAAGAAGACTCTTCTTAC+AGG + chr4_1:85560804-85560823 None:intergenic 35.0%
! ATAGATGCTAGACACCATTT+TGG - chr4_1:85560836-85560855 Msa0580470:intron 35.0%
! TAGATGCTAGACACCATTTT+GGG - chr4_1:85560837-85560856 Msa0580470:intron 35.0%
!! GATATGACTTGTTGATCCAA+TGG - chr4_1:85560956-85560975 Msa0580470:intron 35.0%
!!! TTTTAACTTAAAAGGGGAGG+GGG - chr4_1:85561170-85561189 Msa0580470:intron 35.0%
GTAATTCAAACTTCTCTCAG+GGG - chr4_1:85561195-85561214 Msa0580470:intron 35.0%
TTCACAAAGGAAGCTAAACA+GGG + chr4_1:85561378-85561397 None:intergenic 35.0%
TTAGCTTCCTTTGTGAACTT+CGG - chr4_1:85561381-85561400 Msa0580470:intron 35.0%
AGAACAAAGTAAAACGATGC+TGG + chr4_1:85561612-85561631 None:intergenic 35.0%
ACTTAAACGGTTCAACAAGT+AGG + chr4_1:85561668-85561687 None:intergenic 35.0%
! TAAGTATTGTCAGTGCTATC+TGG - chr4_1:85561683-85561702 Msa0580470:intron 35.0%
GTAAGTCATCATTATTCAGC+AGG - chr4_1:85561765-85561784 Msa0580470:intron 35.0%
! TTATTCAGCAGGGTGAATTT+TGG - chr4_1:85561776-85561795 Msa0580470:intron 35.0%
!!! TGCGTGTTATTTTGTTCCAA+TGG + chr4_1:85561865-85561884 None:intergenic 35.0%
!!! TGTACCTTTTCTAGTTCACA+AGG - chr4_1:85561954-85561973 Msa0580470:intron 35.0%
ACAACCTTGTGAACTAGAAA+AGG + chr4_1:85561961-85561980 None:intergenic 35.0%
! CCTTCTGCTTATTCCTTTTA+AGG + chr4_1:85562280-85562299 None:intergenic 35.0%
CCTTAAAAGGAATAAGCAGA+AGG - chr4_1:85562277-85562296 Msa0580470:intron 35.0%
GAAAAACTTCTACTCAGGTA+TGG - chr4_1:85562315-85562334 Msa0580470:intron 35.0%
! TCAGGTATGGGTGATTTTTA+TGG - chr4_1:85562328-85562347 Msa0580470:intron 35.0%
ATTAACTGAGTAGTGGTGTT+AGG - chr4_1:85562352-85562371 Msa0580470:intron 35.0%
!! TACTTGTGTGTTGTTGTTTC+TGG - chr4_1:85562381-85562400 Msa0580470:intron 35.0%
TGTACTCTTCTCATGTAAGA+TGG - chr4_1:85562413-85562432 Msa0580470:intron 35.0%
TACTAGTCAATGCATGATAC+AGG - chr4_1:85562482-85562501 Msa0580470:intron 35.0%
GATTAACACTTCCTAAATGG+TGG - chr4_1:85562720-85562739 Msa0580470:intron 35.0%
AAAAAAGAAACATGTTGGCC+TGG - chr4_1:85562902-85562921 Msa0580470:intron 35.0%
! AAAAAGAAACATGTTGGCCT+GGG - chr4_1:85562903-85562922 Msa0580470:intron 35.0%
!!! GTAGCATATTGGTTTTCACA+TGG + chr4_1:85563017-85563036 None:intergenic 35.0%
TCACAAGTTCAATGCCTATT+TGG - chr4_1:85563072-85563091 Msa0580470:intron 35.0%
AAGTTCAATGCCTATTTGGA+TGG - chr4_1:85563076-85563095 Msa0580470:intron 35.0%
! ATTTTCAATTGTACAGCCAG+TGG - chr4_1:85563112-85563131 Msa0580470:intron 35.0%
!! AAGAACTAAAAGGAGGCATT+TGG + chr4_1:85563216-85563235 None:intergenic 35.0%
!!! AAATGCCTCCTTTTAGTTCT+TGG - chr4_1:85563215-85563234 Msa0580470:intron 35.0%
TATCACAGCCAAGAACTAAA+AGG + chr4_1:85563226-85563245 None:intergenic 35.0%
CATTTGTAAGCCTCATGATT+AGG + chr4_1:85563280-85563299 None:intergenic 35.0%
AACTTGTAAGCCTCAAGATT+AGG + chr4_1:85563322-85563341 None:intergenic 35.0%
CAGATCTGATATGTCTTCTA+TGG + chr4_1:85563412-85563431 None:intergenic 35.0%
!! GTTGTTATGAAAGCGCTATA+TGG - chr4_1:85563590-85563609 Msa0580470:intron 35.0%
ATTCTGGTCAACTTAAGGTA+TGG - chr4_1:85563717-85563736 Msa0580470:intron 35.0%
TAAGTCTAAAGACTTACACC+TGG + chr4_1:85563891-85563910 None:intergenic 35.0%
AAAAAACTACGATGAGGAAG+GGG + chr4_1:85563992-85564011 None:intergenic 35.0%
GAAAAAACTACGATGAGGAA+GGG + chr4_1:85563993-85564012 None:intergenic 35.0%
AGAAAAAACTACGATGAGGA+AGG + chr4_1:85563994-85564013 None:intergenic 35.0%
TTGGAGAAAAAACTACGATG+AGG + chr4_1:85563998-85564017 None:intergenic 35.0%
GGAATCACAAGTTTCATTGT+TGG + chr4_1:85564017-85564036 None:intergenic 35.0%
!! TGAGATTGTTGATGACAGAA+TGG + chr4_1:85564059-85564078 None:intergenic 35.0%
TGCTGCAAACTCCTTTAATT+AGG - chr4_1:85564691-85564710 Msa0580470:intron 35.0%
ACTCCTTTAATTAGGCATGA+TGG - chr4_1:85564699-85564718 Msa0580470:intron 35.0%
CTCCTTTAATTAGGCATGAT+GGG - chr4_1:85564700-85564719 Msa0580470:intron 35.0%
AACCCATCATGCCTAATTAA+AGG + chr4_1:85564705-85564724 None:intergenic 35.0%
! TTTTTGCATCTTCGCGATAA+AGG + chr4_1:85564962-85564981 None:intergenic 35.0%
GATGCAAAAACCTACTTGAA+AGG - chr4_1:85564972-85564991 Msa0580470:intron 35.0%
! GTGCTCCCAAAACTTAATTT+TGG + chr4_1:85565133-85565152 None:intergenic 35.0%
! TACAACAGTTTAGTTTCTCC+TGG + chr4_1:85565242-85565261 None:intergenic 35.0%
!! TAATACCTTGTGTTGATTGC+CGG + chr4_1:85565282-85565301 None:intergenic 35.0%
! GAGTATAAACCTTTTGCATC+TGG - chr4_1:85565334-85565353 Msa0580470:intron 35.0%
! ATAAACCTTTTGCATCTGGT+TGG - chr4_1:85565338-85565357 Msa0580470:intron 35.0%
!! TTGCCTTGTTTACATACTTG+AGG - chr4_1:85565493-85565512 Msa0580470:intron 35.0%
! ACCTTCAAGCTACAATTTTC+AGG - chr4_1:85565553-85565572 Msa0580470:intron 35.0%
! CCCTTATTTCATCATTTGCA+GGG + chr4_1:85565627-85565646 None:intergenic 35.0%
CCCTGCAAATGATGAAATAA+GGG - chr4_1:85565624-85565643 Msa0580470:intron 35.0%
!!! TGATGAAATAAGGGCGTTTT+AGG - chr4_1:85565633-85565652 Msa0580470:intron 35.0%
GAGCCAGAAAATTTGAATAG+TGG - chr4_1:85565737-85565756 Msa0580470:intron 35.0%
GCCAGAAAATTTGAATAGTG+GGG - chr4_1:85565739-85565758 Msa0580470:intron 35.0%
CCAGAAAATTTGAATAGTGG+GGG - chr4_1:85565740-85565759 Msa0580470:intron 35.0%
! ACATCTCTCTCTCTCTTTTT+AGG - chr4_1:85565882-85565901 Msa0580470:intron 35.0%
!!! AAAAGTGGGAAGTGCTTTTT+TGG + chr4_1:85565925-85565944 None:intergenic 35.0%
GGAAGAAGATGAAGAAAAAG+TGG + chr4_1:85565940-85565959 None:intergenic 35.0%
GCAATAAATTGTGTATACGG+TGG + chr4_1:85566025-85566044 None:intergenic 35.0%
CAACTGATGCACTTTCATAT+AGG - chr4_1:85566152-85566171 Msa0580470:CDS 35.0%
AATGAAAATTTAGTGCAGGC+AGG - chr4_1:85566329-85566348 Msa0580470:CDS 35.0%
AGGAACATCACACAAAATCA+GGG + chr4_1:85566384-85566403 None:intergenic 35.0%
AAGGAACATCACACAAAATC+AGG + chr4_1:85566385-85566404 None:intergenic 35.0%
TGGGCAAGAATGAACTTATA+TGG + chr4_1:85566436-85566455 None:intergenic 35.0%
ATAAGTTCATTCTTGCCCAA+TGG - chr4_1:85566437-85566456 Msa0580470:five_prime_UTR 35.0%
CAAGAAGTGACAATAACAAC+CGG - chr4_1:85566501-85566520 Msa0580470:five_prime_UTR 35.0%
TCCCAAACAAAACATCCACA+AGG + chr4_1:85555527-85555546 None:intergenic 40.0%
AGAGAAATTGTGAATGGCGA+GGG + chr4_1:85555590-85555609 None:intergenic 40.0%
!! GAAGGTAGTGGAGAATTTGA+GGG + chr4_1:85555628-85555647 None:intergenic 40.0%
!! TGAAGGTAGTGGAGAATTTG+AGG + chr4_1:85555629-85555648 None:intergenic 40.0%
!! AGAGGATTTTGGTACTTGTC+TGG + chr4_1:85555786-85555805 None:intergenic 40.0%
TTCAGATCCGAATAAGAGAC+AGG - chr4_1:85555863-85555882 Msa0580470:intron 40.0%
GGTATGGAAGGATTGAAATC+TGG - chr4_1:85555900-85555919 Msa0580470:intron 40.0%
GGAAGGATTGAAATCTGGTT+TGG - chr4_1:85555905-85555924 Msa0580470:intron 40.0%
TGAAGAGATTAAAGCCGAGT+TGG - chr4_1:85555953-85555972 Msa0580470:intron 40.0%
AAGAAGGGAACATGAGAAGA+TGG - chr4_1:85555989-85556008 Msa0580470:intron 40.0%
! GTGGCAAGTTTTCAATCTTC+CGG - chr4_1:85556011-85556030 Msa0580470:intron 40.0%
! TGGCAAGTTTTCAATCTTCC+GGG - chr4_1:85556012-85556031 Msa0580470:intron 40.0%
CAAATTAGCCAAAATCGTCC+CGG + chr4_1:85556033-85556052 None:intergenic 40.0%
!! AGCTAGCTTGTAGTTGATAG+TGG - chr4_1:85556433-85556452 Msa0580470:three_prime_UTR 40.0%
AAGTCCAGGGATTAATGAAC+TGG - chr4_1:85556609-85556628 Msa0580470:exon 40.0%
TTTATCCCATTAAGTGGGGT+CGG + chr4_1:85556679-85556698 None:intergenic 40.0%
GGACAAAAACTGAAATCTCC+TGG - chr4_1:85556799-85556818 Msa0580470:CDS 40.0%
AAATATGTTCGTGGTCCAAG+AGG - chr4_1:85556861-85556880 Msa0580470:intron 40.0%
!! TCCAAGAGGTGTCAGTTTAA+TGG - chr4_1:85556875-85556894 Msa0580470:intron 40.0%
ACCATTAAACTGACACCTCT+TGG + chr4_1:85556879-85556898 None:intergenic 40.0%
AGCTGGACTTTGTAATCTCA+AGG - chr4_1:85556899-85556918 Msa0580470:intron 40.0%
GCTGGACTTTGTAATCTCAA+GGG - chr4_1:85556900-85556919 Msa0580470:intron 40.0%
! GATGTTTCTGAGCATCAGAA+TGG - chr4_1:85557128-85557147 Msa0580470:intron 40.0%
TTAGCAGTTGAAGGACATCA+AGG - chr4_1:85557213-85557232 Msa0580470:intron 40.0%
TAATTGGAGTGCAGACATCA+CGG - chr4_1:85557322-85557341 Msa0580470:intron 40.0%
AGTGTGATGATATAACGCTG+GGG + chr4_1:85557433-85557452 None:intergenic 40.0%
GAGTGTGATGATATAACGCT+GGG + chr4_1:85557434-85557453 None:intergenic 40.0%
TGAGTGTGATGATATAACGC+TGG + chr4_1:85557435-85557454 None:intergenic 40.0%
!! CATTTGTTGTTTCTGACAGC+TGG + chr4_1:85557526-85557545 None:intergenic 40.0%
CAGCTGTCAGAAACAACAAA+TGG - chr4_1:85557524-85557543 Msa0580470:intron 40.0%
ATGTATGCTCTTCTATGCCT+TGG - chr4_1:85557549-85557568 Msa0580470:intron 40.0%
AAAGGAATGATCTGTCTGCA+TGG - chr4_1:85557797-85557816 Msa0580470:intron 40.0%
TGTTGGCCAATTCAAAGCAT+TGG - chr4_1:85557953-85557972 Msa0580470:intron 40.0%
!!! TTTGGCTTTTTGTTGCCTCA+GGG - chr4_1:85557980-85557999 Msa0580470:intron 40.0%
GGAAGAAAGAAGACGAGAAA+AGG - chr4_1:85558107-85558126 Msa0580470:intron 40.0%
! TCCACCATTCTACTCTGAAA+AGG - chr4_1:85558233-85558252 Msa0580470:intron 40.0%
! CCACCATTCTACTCTGAAAA+GGG - chr4_1:85558234-85558253 Msa0580470:intron 40.0%
! CACCATTCTACTCTGAAAAG+GGG - chr4_1:85558235-85558254 Msa0580470:intron 40.0%
CTTTCTCAACTCCTTTAGCT+CGG - chr4_1:85558366-85558385 Msa0580470:CDS 40.0%
TCTAAATCTCATGGCTGCAT+TGG - chr4_1:85558435-85558454 Msa0580470:CDS 40.0%
TGTCACTGTATTGTTGGCAA+AGG - chr4_1:85558549-85558568 Msa0580470:CDS 40.0%
TTGTTGGCAAAGGTCTATTG+TGG - chr4_1:85558559-85558578 Msa0580470:intron 40.0%
!! AAAAGGAGGTGTTGACTAGA+TGG + chr4_1:85558748-85558767 None:intergenic 40.0%
! CTGGGGTCTATTTTCTTGTT+GGG - chr4_1:85558876-85558895 Msa0580470:intron 40.0%
TAAATTGAAAGGGAAAGGCC+AGG - chr4_1:85558991-85559010 Msa0580470:intron 40.0%
CATTCGGATTCTTAAAGCAG+TGG - chr4_1:85559033-85559052 Msa0580470:intron 40.0%
!! TTTTCTGCAGATGGTAGTGT+TGG - chr4_1:85559125-85559144 Msa0580470:intron 40.0%
AGGAAACATGTCTGTTGTCT+AGG - chr4_1:85559198-85559217 Msa0580470:intron 40.0%
TTCAGTGTAGAGGTGAAACT+TGG - chr4_1:85559269-85559288 Msa0580470:intron 40.0%
TGATACAGTCTCATCTTAGG+TGG - chr4_1:85559412-85559431 Msa0580470:intron 40.0%
!! CTGGATCTCTCTTTAAGGTT+TGG + chr4_1:85559566-85559585 None:intergenic 40.0%
! AATACTTGATAGCCTGTAGG+TGG - chr4_1:85559649-85559668 Msa0580470:intron 40.0%
CTATTAGCATAACCACCTAC+AGG + chr4_1:85559664-85559683 None:intergenic 40.0%
TCTTCCATTGAGATGGAAGT+TGG - chr4_1:85559777-85559796 Msa0580470:CDS 40.0%
GTTGTATGTAGTAGGACTTC+AGG - chr4_1:85559839-85559858 Msa0580470:intron 40.0%
AGCCCCATGTGTAAAAAACA+GGG + chr4_1:85560160-85560179 None:intergenic 40.0%
TGAGGAAAAGGAGAGTGAAA+AGG + chr4_1:85560332-85560351 None:intergenic 40.0%
TCATGCCAGTCTCTTTAGTA+TGG + chr4_1:85560355-85560374 None:intergenic 40.0%
AAAGAGACTGGCATGATTTC+TGG - chr4_1:85560359-85560378 Msa0580470:intron 40.0%
AAGAGACTGGCATGATTTCT+GGG - chr4_1:85560360-85560379 Msa0580470:intron 40.0%
ATAGGTGGAAACTGGAAACA+AGG + chr4_1:85560571-85560590 None:intergenic 40.0%
TTGTTTCCAGTTTCCACCTA+TGG - chr4_1:85560570-85560589 Msa0580470:intron 40.0%
!! AACCTTTTCAGGGTATTTCC+TGG - chr4_1:85560739-85560758 Msa0580470:intron 40.0%
ACGACAGAATTCAAATCTCC+AGG + chr4_1:85560760-85560779 None:intergenic 40.0%
TGGAGATTTGAATTCTGTCG+TGG - chr4_1:85560759-85560778 Msa0580470:intron 40.0%
GGAGATTTGAATTCTGTCGT+GGG - chr4_1:85560760-85560779 Msa0580470:intron 40.0%
GAGATTTGAATTCTGTCGTG+GGG - chr4_1:85560761-85560780 Msa0580470:intron 40.0%
AGATTTGAATTCTGTCGTGG+GGG - chr4_1:85560762-85560781 Msa0580470:intron 40.0%
AATGGTGTCTAGCATCTATC+AGG + chr4_1:85560835-85560854 None:intergenic 40.0%
!! ATGACTTGTTGATCCAATGG+TGG - chr4_1:85560959-85560978 Msa0580470:intron 40.0%
ACAAGTGTTCTTTCCACCAT+TGG + chr4_1:85560975-85560994 None:intergenic 40.0%
TTAAGCAACTCTTAGGGTAG+AGG - chr4_1:85561302-85561321 Msa0580470:intron 40.0%
GTTCACAAAGGAAGCTAAAC+AGG + chr4_1:85561379-85561398 None:intergenic 40.0%
! TACAGTACCGAAGTTCACAA+AGG + chr4_1:85561391-85561410 None:intergenic 40.0%
! TTGAACCCTATGTTTGCTAC+TGG - chr4_1:85561573-85561592 Msa0580470:intron 40.0%
TTGCTTGCAATTGTCTCCAT+TGG - chr4_1:85561846-85561865 Msa0580470:intron 40.0%
GGAAAAAATGCCGCAGAAAA+AGG - chr4_1:85562663-85562682 Msa0580470:intron 40.0%
AAAAATGCCGCAGAAAAAGG+AGG - chr4_1:85562666-85562685 Msa0580470:intron 40.0%
! CTTTCTTCCTCCTTTTTCTG+CGG + chr4_1:85562676-85562695 None:intergenic 40.0%
TAACACTTCCTAAATGGTGG+TGG - chr4_1:85562723-85562742 Msa0580470:intron 40.0%
CAACTATGGCAGTAGCATAT+TGG + chr4_1:85563028-85563047 None:intergenic 40.0%
CAATATGCTACTGCCATAGT+TGG - chr4_1:85563026-85563045 Msa0580470:intron 40.0%
!! TCTAGCTCCCTCTGTATTTT+GGG + chr4_1:85563182-85563201 None:intergenic 40.0%
!!! TTCTAGCTCCCTCTGTATTT+TGG + chr4_1:85563183-85563202 None:intergenic 40.0%
CAGTTTGAGTCCTAATCATG+AGG - chr4_1:85563267-85563286 Msa0580470:intron 40.0%
CCTCAAGATTAGGACTCAAA+CGG + chr4_1:85563312-85563331 None:intergenic 40.0%
ATGCACACATTTATGCAGAC+AGG + chr4_1:85563358-85563377 None:intergenic 40.0%
AACAAGCAATTAGAAACGGG+TGG - chr4_1:85563563-85563582 Msa0580470:intron 40.0%
ACTTGTGATTCCGTTTACTG+TGG - chr4_1:85564025-85564044 Msa0580470:intron 40.0%
GGATCTCAAACCACAGTAAA+CGG + chr4_1:85564038-85564057 None:intergenic 40.0%
GTGGACAGATCAGAAATCAA+AGG + chr4_1:85564400-85564419 None:intergenic 40.0%
CCAGAACAAACAACAACCAA+GGG + chr4_1:85564429-85564448 None:intergenic 40.0%
GTTCTGGCAAAACTAACTGA+AGG - chr4_1:85564442-85564461 Msa0580470:intron 40.0%
TTGGTGTAAGTCTTTACACC+TGG - chr4_1:85564563-85564582 Msa0580470:CDS 40.0%
! GGTTGAAAGACCTTTCAAGT+AGG + chr4_1:85564985-85565004 None:intergenic 40.0%
! CACGAAGGTGTAAAGAAATC+AGG - chr4_1:85565191-85565210 Msa0580470:intron 40.0%
! AGTTTAGTTTCTCCTGGACA+AGG + chr4_1:85565236-85565255 None:intergenic 40.0%
TACAACCAACCAGATGCAAA+AGG + chr4_1:85565346-85565365 None:intergenic 40.0%
! TTTGCATCTGGTTGGTTGTA+TGG - chr4_1:85565346-85565365 Msa0580470:intron 40.0%
! TTGCATCTGGTTGGTTGTAT+GGG - chr4_1:85565347-85565366 Msa0580470:intron 40.0%
TGAACAATTAGTGATACCCC+AGG - chr4_1:85565409-85565428 Msa0580470:intron 40.0%
GAACAATTAGTGATACCCCA+GGG - chr4_1:85565410-85565429 Msa0580470:intron 40.0%
GTAAACAAGGCAAAACTGCA+GGG + chr4_1:85565486-85565505 None:intergenic 40.0%
TGTAAACAAGGCAAAACTGC+AGG + chr4_1:85565487-85565506 None:intergenic 40.0%
ACTGTTAGATGGAATGCAAG+AGG - chr4_1:85565529-85565548 Msa0580470:intron 40.0%
GCCTGAAAATTGTAGCTTGA+AGG + chr4_1:85565557-85565576 None:intergenic 40.0%
GCCCTGCAAATGATGAAATA+AGG - chr4_1:85565623-85565642 Msa0580470:intron 40.0%
! GCCCTTATTTCATCATTTGC+AGG + chr4_1:85565628-85565647 None:intergenic 40.0%
AAAATTGTGGTACAGCAGCA+GGG + chr4_1:85565706-85565725 None:intergenic 40.0%
! TGTACCACAATTTTGTGCAG+TGG - chr4_1:85565712-85565731 Msa0580470:intron 40.0%
! CCCCCACTATTCAAATTTTC+TGG + chr4_1:85565743-85565762 None:intergenic 40.0%
ATTGTGTATACGGTGGTAGT+AGG + chr4_1:85566018-85566037 None:intergenic 40.0%
GGAACATCACACAAAATCAG+GGG + chr4_1:85566383-85566402 None:intergenic 40.0%
TCTTCTCTTCCTTGGAGAGT+CGG + chr4_1:85555489-85555508 None:intergenic 45.0%
TGTGAATGGCGAGGGTTTAA+GGG + chr4_1:85555582-85555601 None:intergenic 45.0%
TTGTGAATGGCGAGGGTTTA+AGG + chr4_1:85555583-85555602 None:intergenic 45.0%
CAGAGAAATTGTGAATGGCG+AGG + chr4_1:85555591-85555610 None:intergenic 45.0%
GATGATGCGATTGAAGGTAG+TGG + chr4_1:85555640-85555659 None:intergenic 45.0%
CATTGGGATGATGCGATTGA+AGG + chr4_1:85555646-85555665 None:intergenic 45.0%
CAATCGCATCATCCCAATGA+TGG - chr4_1:85555647-85555666 Msa0580470:three_prime_UTR 45.0%
ATTTCTTCGTCGGAGGATTC+GGG + chr4_1:85555726-85555745 None:intergenic 45.0%
GATTTCTTCGTCGGAGGATT+CGG + chr4_1:85555727-85555746 None:intergenic 45.0%
AGCTTTGCGGATTTCTTCGT+CGG + chr4_1:85555736-85555755 None:intergenic 45.0%
TCCGCAAAGCTTATCGTCAA+TGG - chr4_1:85555745-85555764 Msa0580470:intron 45.0%
CCCATTGACGATAAGCTTTG+CGG + chr4_1:85555749-85555768 None:intergenic 45.0%
CCGCAAAGCTTATCGTCAAT+GGG - chr4_1:85555746-85555765 Msa0580470:intron 45.0%
! TTTGGAACTTGGTTCGAGGT+TGG - chr4_1:85555923-85555942 Msa0580470:intron 45.0%
! AGATTAAAGCCGAGTTGGAG+AGG - chr4_1:85555958-85555977 Msa0580470:intron 45.0%
TCTCTTCAACCTCTCCAACT+CGG + chr4_1:85555970-85555989 None:intergenic 45.0%
TGGAGAGGTTGAAGAGAAGA+AGG - chr4_1:85555973-85555992 Msa0580470:intron 45.0%
GGAGAGGTTGAAGAGAAGAA+GGG - chr4_1:85555974-85555993 Msa0580470:intron 45.0%
AAGGGAACATGAGAAGATGG+TGG - chr4_1:85555992-85556011 Msa0580470:intron 45.0%
! TCAATCTTCCGGGACGATTT+TGG - chr4_1:85556022-85556041 Msa0580470:intron 45.0%
TCTGTGCCGCAGTATTTAGA+TGG - chr4_1:85556053-85556072 Msa0580470:intron 45.0%
CCGTCACCATCTAAATACTG+CGG + chr4_1:85556062-85556081 None:intergenic 45.0%
CCGCAGTATTTAGATGGTGA+CGG - chr4_1:85556059-85556078 Msa0580470:intron 45.0%
!! ATGGTGACGGTCTCTTTAGA+GGG - chr4_1:85556072-85556091 Msa0580470:intron 45.0%
! GTTGATAAGCGAACTGATCG+TGG - chr4_1:85556152-85556171 Msa0580470:intron 45.0%
!! ATGAGCTTATAGCGGATAGC+AGG - chr4_1:85556408-85556427 Msa0580470:three_prime_UTR 45.0%
CACAGGGCATAATATCATCC+AGG + chr4_1:85556820-85556839 None:intergenic 45.0%
GGTGTCAGTTTAATGGTAGC+TGG - chr4_1:85556882-85556901 Msa0580470:intron 45.0%
GAGTTGAGATACCCATCCTT+AGG - chr4_1:85557074-85557093 Msa0580470:intron 45.0%
CGAAATGTTGTTGGGATTGG+CGG - chr4_1:85557186-85557205 Msa0580470:intron 45.0%
! GCCGGTTTACGTTCACTAAT+TGG - chr4_1:85557306-85557325 Msa0580470:intron 45.0%
!! TTGTTGTTTCTGACAGCTGG+CGG + chr4_1:85557523-85557542 None:intergenic 45.0%
TGGCTTTCAACCAGAAAACC+AGG - chr4_1:85557736-85557755 Msa0580470:intron 45.0%
!!! GTTTGGCTTTTTGTTGCCTC+AGG - chr4_1:85557979-85557998 Msa0580470:intron 45.0%
TCACAACCATCTGTAGCTGT+AGG - chr4_1:85558082-85558101 Msa0580470:intron 45.0%
CACAACCATCTGTAGCTGTA+GGG - chr4_1:85558083-85558102 Msa0580470:intron 45.0%
AAGTACCTTCACATCTGCAG+TGG + chr4_1:85558137-85558156 None:intergenic 45.0%
! CCCTTTTCAGAGTAGAATGG+TGG + chr4_1:85558237-85558256 None:intergenic 45.0%
! CTCCCCTTTTCAGAGTAGAA+TGG + chr4_1:85558240-85558259 None:intergenic 45.0%
AAATCTCATGGCTGCATTGG+AGG - chr4_1:85558438-85558457 Msa0580470:CDS 45.0%
GCTGCATTGGAGGAAGATTT+GGG - chr4_1:85558448-85558467 Msa0580470:CDS 45.0%
GTATGGAATGTCAGTGGCTA+AGG + chr4_1:85558832-85558851 None:intergenic 45.0%
GATGGTGTATGGAATGTCAG+TGG + chr4_1:85558838-85558857 None:intergenic 45.0%
! GCTGGGGTCTATTTTCTTGT+TGG - chr4_1:85558875-85558894 Msa0580470:intron 45.0%
!! GGTAACTGCTTTTCTGCAGA+TGG - chr4_1:85559116-85559135 Msa0580470:intron 45.0%
! GGAGAGTATACAACTCCACA+AGG - chr4_1:85559290-85559309 Msa0580470:intron 45.0%
TCCATTGAGATGGAAGTTGG+TGG - chr4_1:85559780-85559799 Msa0580470:CDS 45.0%
ACCACCAACTTCCATCTCAA+TGG + chr4_1:85559784-85559803 None:intergenic 45.0%
!! ATTGAGATGGAAGTTGGTGG+TGG - chr4_1:85559783-85559802 Msa0580470:CDS 45.0%
! ACACTCTTTAAAAGGGCAGC+CGG - chr4_1:85560062-85560081 Msa0580470:intron 45.0%
CCTACAACACACCAATTGGT+GGG + chr4_1:85560129-85560148 None:intergenic 45.0%
CAGCCCCATGTGTAAAAAAC+AGG + chr4_1:85560161-85560180 None:intergenic 45.0%
!! TTACACATGGGGCTGTTTCT+AGG - chr4_1:85560166-85560185 Msa0580470:intron 45.0%
GTTGTTGTCACGTGACTCAA+AGG + chr4_1:85560194-85560213 None:intergenic 45.0%
GAGAGTGAAAAGGCTAGTGT+AGG + chr4_1:85560322-85560341 None:intergenic 45.0%
CCAGTCTCTTTAGTATGGTG+AGG + chr4_1:85560350-85560369 None:intergenic 45.0%
CCTCACCATACTAAAGAGAC+TGG - chr4_1:85560347-85560366 Msa0580470:intron 45.0%
AGAGACTGGCATGATTTCTG+GGG - chr4_1:85560361-85560380 Msa0580470:intron 45.0%
!! GAACCCTAAAGTGTTGGGAA+GGG + chr4_1:85560624-85560643 None:intergenic 45.0%
CTCCAGGAAATACCCTGAAA+AGG + chr4_1:85560744-85560763 None:intergenic 45.0%
GTGGAAAGAACACTTGTGCA+TGG - chr4_1:85560978-85560997 Msa0580470:intron 45.0%
CAAAGGAAGCTAAACAGGGT+AGG + chr4_1:85561374-85561393 None:intergenic 45.0%
ACGCTCCAGTAGCAAACATA+GGG + chr4_1:85561581-85561600 None:intergenic 45.0%
AACGCTCCAGTAGCAAACAT+AGG + chr4_1:85561582-85561601 None:intergenic 45.0%
!! TAAGCAGAAGGCTCTAGAGA+AGG - chr4_1:85562289-85562308 Msa0580470:intron 45.0%
GGAGGGAAAAACTTCTACTC+AGG - chr4_1:85562310-85562329 Msa0580470:intron 45.0%
!! TCCTAAATGGTGGTGGTTGT+CGG - chr4_1:85562730-85562749 Msa0580470:intron 45.0%
! AAACATGTTGGCCTGGGTTT+GGG - chr4_1:85562909-85562928 Msa0580470:intron 45.0%
ATGAAGTTGGATGGCCATAG+CGG + chr4_1:85562986-85563005 None:intergenic 45.0%
GCAGACACAATGAAGTTGGA+TGG + chr4_1:85562995-85563014 None:intergenic 45.0%
CATGGCAGACACAATGAAGT+TGG + chr4_1:85562999-85563018 None:intergenic 45.0%
AAAGGAGAACTAAAGGCCAC+TGG + chr4_1:85563131-85563150 None:intergenic 45.0%
AGCACTAGCCCAAAATACAG+AGG - chr4_1:85563171-85563190 Msa0580470:intron 45.0%
GCACTAGCCCAAAATACAGA+GGG - chr4_1:85563172-85563191 Msa0580470:intron 45.0%
CACAGCCAAGAACTAAAAGG+AGG + chr4_1:85563223-85563242 None:intergenic 45.0%
CCGTTTGAGTCCTAATCTTG+AGG - chr4_1:85563309-85563328 Msa0580470:intron 45.0%
TTGTGCAGGTTCAAGAAGCA+AGG - chr4_1:85563486-85563505 Msa0580470:intron 45.0%
TGTGCAGGTTCAAGAAGCAA+GGG - chr4_1:85563487-85563506 Msa0580470:intron 45.0%
! AGACTTACACCTGGTGTCAA+CGG + chr4_1:85563882-85563901 None:intergenic 45.0%
!! CCCTTGGTTGTTGTTTGTTC+TGG - chr4_1:85564426-85564445 Msa0580470:intron 45.0%
GCCAGAACAAACAACAACCA+AGG + chr4_1:85564430-85564449 None:intergenic 45.0%
CCACATAAGGAACACATCAC+AGG + chr4_1:85564499-85564518 None:intergenic 45.0%
CCTGTGATGTGTTCCTTATG+TGG - chr4_1:85564496-85564515 Msa0580470:intron 45.0%
! GTCTTTACACCTGGTGTCAA+CGG - chr4_1:85564572-85564591 Msa0580470:CDS 45.0%
TGCATCTTCGCGATAAAGGA+AGG + chr4_1:85564958-85564977 None:intergenic 45.0%
! TGGGAGCACACCTGAAATAA+TGG - chr4_1:85565144-85565163 Msa0580470:intron 45.0%
TTGTTGATGCAGCTTCACGA+AGG - chr4_1:85565176-85565195 Msa0580470:intron 45.0%
! GGATTTTGTGATCCTTGTCC+AGG - chr4_1:85565221-85565240 Msa0580470:intron 45.0%
TATGTAGAGTACGCTCATGC+CGG - chr4_1:85565260-85565279 Msa0580470:intron 45.0%
TTATATCCTGTGGATGCCCT+GGG + chr4_1:85565429-85565448 None:intergenic 45.0%
TTTATATCCTGTGGATGCCC+TGG + chr4_1:85565430-85565449 None:intergenic 45.0%
!! AGCTACAATTTTCAGGCCAG+TGG - chr4_1:85565560-85565579 Msa0580470:intron 45.0%
!! GCTACAATTTTCAGGCCAGT+GGG - chr4_1:85565561-85565580 Msa0580470:intron 45.0%
CAAAATTGTGGTACAGCAGC+AGG + chr4_1:85565707-85565726 None:intergenic 45.0%
! ACCACAATTTTGTGCAGTGG+CGG - chr4_1:85565715-85565734 Msa0580470:intron 45.0%
! GCGGACCCTTTCAATTTTCA+TGG + chr4_1:85566096-85566115 None:intergenic 45.0%
ACATCACACAAAATCAGGGG+CGG + chr4_1:85566380-85566399 None:intergenic 45.0%
ACGGCACTCGATGTTATTAC+CGG + chr4_1:85566523-85566542 None:intergenic 45.0%
!!! TTTATTTTTTTAAATAATTG+AGG + chr4_1:85557001-85557020 None:intergenic 5.0%
!! TTTCATTATTTATTAAATAT+TGG + chr4_1:85562615-85562634 None:intergenic 5.0%
!! TATTTAATAAATAATGAAAA+AGG - chr4_1:85562616-85562635 Msa0580470:intron 5.0%
!!! TATTCAATATTTTTAAAATA+TGG + chr4_1:85565856-85565875 None:intergenic 5.0%
CTCCAAGGAAGAGAAGAGAG+TGG - chr4_1:85555492-85555511 Msa0580470:three_prime_UTR 50.0%
GTCCACTCTCTTCTCTTCCT+TGG + chr4_1:85555497-85555516 None:intergenic 50.0%
GAGTGGACCAAGATACCTTG+TGG - chr4_1:85555509-85555528 Msa0580470:three_prime_UTR 50.0%
TTTGCGGATTTCTTCGTCGG+AGG + chr4_1:85555733-85555752 None:intergenic 50.0%
GTGGCAGCATCTTTCATGAG+AGG + chr4_1:85555804-85555823 None:intergenic 50.0%
!! CTGGTTTGGAACTTGGTTCG+AGG - chr4_1:85555919-85555938 Msa0580470:intron 50.0%
!! GATGGTGACGGTCTCTTTAG+AGG - chr4_1:85556071-85556090 Msa0580470:intron 50.0%
! GACGGTCTCTTTAGAGGGTA+TGG - chr4_1:85556077-85556096 Msa0580470:intron 50.0%
! AGCTAGCTTGTAGTTGGCAG+CGG - chr4_1:85556199-85556218 Msa0580470:intron 50.0%
ATGTAGCCGACCCCACTTAA+TGG - chr4_1:85556670-85556689 Msa0580470:intron 50.0%
TGTAGCCGACCCCACTTAAT+GGG - chr4_1:85556671-85556690 Msa0580470:intron 50.0%
GGCGGCAATTTAGCAGTTGA+AGG - chr4_1:85557204-85557223 Msa0580470:intron 50.0%
GCAGTTGAAGGACATCAAGG+TGG - chr4_1:85557216-85557235 Msa0580470:intron 50.0%
GTTGAAGGACATCAAGGTGG+TGG - chr4_1:85557219-85557238 Msa0580470:intron 50.0%
TCACACTCATCTGCAACAGC+AGG - chr4_1:85557446-85557465 Msa0580470:intron 50.0%
!! TGTTGTTTCTGACAGCTGGC+GGG + chr4_1:85557522-85557541 None:intergenic 50.0%
TGGTTGAAAGCCAGATGCAG+TGG + chr4_1:85557729-85557748 None:intergenic 50.0%
AACCATCTGTAGCTGTAGGG+TGG - chr4_1:85558086-85558105 Msa0580470:intron 50.0%
TTCCACCCTACAGCTACAGA+TGG + chr4_1:85558091-85558110 None:intergenic 50.0%
GTCCTTTCGAGACATCAGCT+CGG - chr4_1:85558394-85558413 Msa0580470:CDS 50.0%
TACCGAGCTGATGTCTCGAA+AGG + chr4_1:85558399-85558418 None:intergenic 50.0%
GGCTGCATTGGAGGAAGATT+TGG - chr4_1:85558447-85558466 Msa0580470:CDS 50.0%
GCATTGGAGGAAGATTTGGG+AGG - chr4_1:85558451-85558470 Msa0580470:CDS 50.0%
GGAAAGGCCAGGATAAAGTG+TGG - chr4_1:85559002-85559021 Msa0580470:intron 50.0%
AGCAGCTCCACACTTTATCC+TGG + chr4_1:85559012-85559031 None:intergenic 50.0%
AAGTGTGGAGCTGCTGCATT+CGG - chr4_1:85559017-85559036 Msa0580470:intron 50.0%
CTTAGGTGGTTTGACATGCG+TGG - chr4_1:85559426-85559445 Msa0580470:intron 50.0%
CTCCTAAGTAGTGCTTCCCT+GGG + chr4_1:85559458-85559477 None:intergenic 50.0%
TCTCCTAAGTAGTGCTTCCC+TGG + chr4_1:85559459-85559478 None:intergenic 50.0%
!! AGATGGAAGTTGGTGGTGGA+AGG - chr4_1:85559787-85559806 Msa0580470:CDS 50.0%
! CCAGCGCACAGTACTGAATT+TGG + chr4_1:85559820-85559839 None:intergenic 50.0%
CCAAATTCAGTACTGTGCGC+TGG - chr4_1:85559817-85559836 Msa0580470:intron 50.0%
!! GTGCGCTGGTTGTATGTAGT+AGG - chr4_1:85559831-85559850 Msa0580470:intron 50.0%
! CACTCTTTAAAAGGGCAGCC+GGG - chr4_1:85560063-85560082 Msa0580470:intron 50.0%
CCCACCAATTGGTGTGTTGT+AGG - chr4_1:85560126-85560145 Msa0580470:intron 50.0%
GCCTACAACACACCAATTGG+TGG + chr4_1:85560130-85560149 None:intergenic 50.0%
GCTGCCTACAACACACCAAT+TGG + chr4_1:85560133-85560152 None:intergenic 50.0%
ACAACTTTACCGTTGCGCCA+AGG - chr4_1:85560209-85560228 Msa0580470:intron 50.0%
TGTTAGAAAAGGGGGAGCCT+TGG + chr4_1:85560229-85560248 None:intergenic 50.0%
ACGGGTCCAACATGATTCAG+TGG + chr4_1:85560284-85560303 None:intergenic 50.0%
GGGAAGGGAGGATCATGAAA+TGG + chr4_1:85560609-85560628 None:intergenic 50.0%
TCCTCCCTTCCCAACACTTT+AGG - chr4_1:85560617-85560636 Msa0580470:intron 50.0%
CCTCCCTTCCCAACACTTTA+GGG - chr4_1:85560618-85560637 Msa0580470:intron 50.0%
!! GGAACCCTAAAGTGTTGGGA+AGG + chr4_1:85560625-85560644 None:intergenic 50.0%
! GGGAGGAACCCTAAAGTGTT+GGG + chr4_1:85560629-85560648 None:intergenic 50.0%
AGGGAGGAACCCTAAAGTGT+TGG + chr4_1:85560630-85560649 None:intergenic 50.0%
TGCATTGAACCCTAACGCGT+GGG + chr4_1:85560655-85560674 None:intergenic 50.0%
TTGCATTGAACCCTAACGCG+TGG + chr4_1:85560656-85560675 None:intergenic 50.0%
!! CAGAAGGCTCTAGAGAAGGA+GGG - chr4_1:85562293-85562312 Msa0580470:intron 50.0%
TCCGACAACCACCACCATTT+AGG + chr4_1:85562734-85562753 None:intergenic 50.0%
!! TAAATGGTGGTGGTTGTCGG+AGG - chr4_1:85562733-85562752 Msa0580470:intron 50.0%
! GAAACATGTTGGCCTGGGTT+TGG - chr4_1:85562908-85562927 Msa0580470:intron 50.0%
GCATTGAACTTGTGACTCGC+AGG + chr4_1:85563067-85563086 None:intergenic 50.0%
TTCTTGAACCTGCACAACCG+GGG + chr4_1:85563483-85563502 None:intergenic 50.0%
CTTCTTGAACCTGCACAACC+GGG + chr4_1:85563484-85563503 None:intergenic 50.0%
GCTTCTTGAACCTGCACAAC+CGG + chr4_1:85563485-85563504 None:intergenic 50.0%
GCAATTAGAAACGGGTGGAC+TGG - chr4_1:85563568-85563587 Msa0580470:intron 50.0%
ATCTGTCCACACACAACCCT+TGG - chr4_1:85564410-85564429 Msa0580470:intron 50.0%
CAACAACCAAGGGTTGTGTG+TGG + chr4_1:85564419-85564438 None:intergenic 50.0%
AGAGAGAGAGAGAGAGAGTC+AGG + chr4_1:85564600-85564619 None:intergenic 50.0%
TCATGCCGGCAATCAACACA+AGG - chr4_1:85565274-85565293 Msa0580470:intron 50.0%
TATATCCTGTGGATGCCCTG+GGG + chr4_1:85565428-85565447 None:intergenic 50.0%
CATTTGCAGGGCGTAACAGA+AGG + chr4_1:85565615-85565634 None:intergenic 50.0%
TCCGCCACTGCACAAAATTG+TGG + chr4_1:85565719-85565738 None:intergenic 50.0%
AGCCACACACAAGGTTGTGT+GGG + chr4_1:85566357-85566376 None:intergenic 50.0%
CAACACTGTCCGACTCTCCA+AGG - chr4_1:85555477-85555496 Msa0580470:three_prime_UTR 55.0%
GGCGAGGGTTTAAGGGTGAA+AGG + chr4_1:85555575-85555594 None:intergenic 55.0%
AGGATTCGGGTGAGAGGTTG+AGG + chr4_1:85555713-85555732 None:intergenic 55.0%
TGGAGTGCAGACATCACGGT+TGG - chr4_1:85557326-85557345 Msa0580470:intron 55.0%
GACTGCCACTGCAGATGTGA+AGG - chr4_1:85558129-85558148 Msa0580470:intron 55.0%
! CAACTCCTTTAGCTCGGCAC+AGG - chr4_1:85558372-85558391 Msa0580470:CDS 55.0%
AAGGACCTGTGCCGAGCTAA+AGG + chr4_1:85558380-85558399 None:intergenic 55.0%
!! GACCCAGGGAAGCACTACTT+AGG - chr4_1:85559453-85559472 Msa0580470:intron 55.0%
ACTAATGCTCCCGCATACGC+AGG - chr4_1:85560089-85560108 Msa0580470:intron 55.0%
CTAATGCTCCCGCATACGCA+GGG - chr4_1:85560090-85560109 Msa0580470:intron 55.0%
!! CCCTAAAGTGTTGGGAAGGG+AGG + chr4_1:85560621-85560640 None:intergenic 55.0%
GCATTGAACCCTAACGCGTG+GGG + chr4_1:85560654-85560673 None:intergenic 55.0%
!! GCAGAAGGCTCTAGAGAAGG+AGG - chr4_1:85562292-85562311 Msa0580470:intron 55.0%
TTGAGACCTGACCCAAACCC+AGG + chr4_1:85562923-85562942 None:intergenic 55.0%
TGGGTTTGGGTCAGGTCTCA+AGG - chr4_1:85562922-85562941 Msa0580470:intron 55.0%
AGTCAGGATCCGTTGACACC+AGG - chr4_1:85563870-85563889 Msa0580470:intron 55.0%
AGTCAGGATCCGTTGACACC+AGG + chr4_1:85563870-85563889 None:intergenic 55.0%
AGCCCACACAACCTTGTGTG+TGG - chr4_1:85566352-85566371 Msa0580470:CDS 55.0%
GAGCCACACACAAGGTTGTG+TGG + chr4_1:85566358-85566377 None:intergenic 55.0%
ACATGCGTGGAGACGACCCA+GGG - chr4_1:85559439-85559458 Msa0580470:intron 60.0%
!! TGCGGGAGCATTAGTGCACC+CGG + chr4_1:85560084-85560103 None:intergenic 60.0%
TTCCTGGACCCTGCGTATGC+GGG + chr4_1:85560101-85560120 None:intergenic 60.0%
CTTCCTGGACCCTGCGTATG+CGG + chr4_1:85560102-85560121 None:intergenic 60.0%
GCATACGCAGGGTCCAGGAA+GGG - chr4_1:85560101-85560120 Msa0580470:intron 60.0%
CATACGCAGGGTCCAGGAAG+GGG - chr4_1:85560102-85560121 Msa0580470:intron 60.0%
CAATTGGTGGGACCCCTTCC+TGG + chr4_1:85560117-85560136 None:intergenic 60.0%
CAGGAAGGGGTCCCACCAAT+TGG - chr4_1:85560115-85560134 Msa0580470:intron 60.0%
GAACCCTAACGCGTGGGGAA+GGG + chr4_1:85560649-85560668 None:intergenic 60.0%
TGAACCCTAACGCGTGGGGA+AGG + chr4_1:85560650-85560669 None:intergenic 60.0%
! TGTTGGCCTGGGTTTGGGTC+AGG - chr4_1:85562914-85562933 Msa0580470:intron 60.0%
AACCGGGGAAGCAGAGGAAG+GGG + chr4_1:85563468-85563487 None:intergenic 60.0%
CAACCGGGGAAGCAGAGGAA+GGG + chr4_1:85563469-85563488 None:intergenic 60.0%
ACAACCGGGGAAGCAGAGGA+AGG + chr4_1:85563470-85563489 None:intergenic 60.0%
! TGATACCCCAGGGCATCCAC+AGG - chr4_1:85565420-85565439 Msa0580470:intron 60.0%
CGTCGGAGGATTCGGGTGAG+AGG + chr4_1:85555719-85555738 None:intergenic 65.0%
GACATGCGTGGAGACGACCC+AGG - chr4_1:85559438-85559457 Msa0580470:intron 65.0%
CGCATACGCAGGGTCCAGGA+AGG - chr4_1:85560100-85560119 Msa0580470:intron 65.0%
AAGGGGGAGCCTTGGCGCAA+CGG + chr4_1:85560221-85560240 None:intergenic 65.0%
TCCTCCCTTCCCCACGCGTT+AGG - chr4_1:85560642-85560661 Msa0580470:intron 65.0%
CCTCCCTTCCCCACGCGTTA+GGG - chr4_1:85560643-85560662 Msa0580470:intron 65.0%
ACCCCCTTCCTCTGCTTCCC+CGG - chr4_1:85563463-85563482 Msa0580470:intron 65.0%
ACCGGGGAAGCAGAGGAAGG+GGG + chr4_1:85563467-85563486 None:intergenic 65.0%
CTGCACAACCGGGGAAGCAG+AGG + chr4_1:85563474-85563493 None:intergenic 65.0%
CTCTGCTTCCCCGGTTGTGC+AGG - chr4_1:85563472-85563491 Msa0580470:intron 65.0%
CTCCCGCATACGCAGGGTCC+AGG - chr4_1:85560096-85560115 Msa0580470:intron 70.0%
CCCTAACGCGTGGGGAAGGG+AGG + chr4_1:85560646-85560665 None:intergenic 70.0%
CAGGGGCGGAGCCACACACA+AGG + chr4_1:85566366-85566385 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 85555477 85566586 85555477 ID=Msa0580470;Name=Msa0580470
chr4_1 mRNA 85555477 85566586 85555477 ID=Msa0580470-mRNA-1;Parent=Msa0580470;Name=Msa0580470-mRNA-1;_AED=0.03;_eAED=0.03;_QI=186|1|1|1|0.83|0.76|13|473|540
chr4_1 exon 85555477 85555677 85555477 ID=Msa0580470-mRNA-1:exon:31463;Parent=Msa0580470-mRNA-1
chr4_1 exon 85556343 85556671 85556343 ID=Msa0580470-mRNA-1:exon:31462;Parent=Msa0580470-mRNA-1
chr4_1 exon 85556768 85556875 85556768 ID=Msa0580470-mRNA-1:exon:31461;Parent=Msa0580470-mRNA-1
chr4_1 exon 85558330 85558569 85558330 ID=Msa0580470-mRNA-1:exon:31460;Parent=Msa0580470-mRNA-1
chr4_1 exon 85559732 85559809 85559732 ID=Msa0580470-mRNA-1:exon:31459;Parent=Msa0580470-mRNA-1
chr4_1 exon 85560428 85560508 85560428 ID=Msa0580470-mRNA-1:exon:31458;Parent=Msa0580470-mRNA-1
chr4_1 exon 85561260 85561313 85561260 ID=Msa0580470-mRNA-1:exon:31457;Parent=Msa0580470-mRNA-1
chr4_1 exon 85562203 85562287 85562203 ID=Msa0580470-mRNA-1:exon:31456;Parent=Msa0580470-mRNA-1
chr4_1 exon 85563591 85563679 85563591 ID=Msa0580470-mRNA-1:exon:31455;Parent=Msa0580470-mRNA-1
chr4_1 exon 85563913 85563999 85563913 ID=Msa0580470-mRNA-1:exon:31454;Parent=Msa0580470-mRNA-1
chr4_1 exon 85564513 85564627 85564513 ID=Msa0580470-mRNA-1:exon:31453;Parent=Msa0580470-mRNA-1
chr4_1 exon 85564720 85564917 85564720 ID=Msa0580470-mRNA-1:exon:31452;Parent=Msa0580470-mRNA-1
chr4_1 exon 85565970 85566586 85565970 ID=Msa0580470-mRNA-1:exon:31451;Parent=Msa0580470-mRNA-1
chr4_1 five_prime_UTR 85566401 85566586 85566401 ID=Msa0580470-mRNA-1:five_prime_utr;Parent=Msa0580470-mRNA-1
chr4_1 CDS 85565970 85566400 85565970 ID=Msa0580470-mRNA-1:cds;Parent=Msa0580470-mRNA-1
chr4_1 CDS 85564720 85564917 85564720 ID=Msa0580470-mRNA-1:cds;Parent=Msa0580470-mRNA-1
chr4_1 CDS 85564513 85564627 85564513 ID=Msa0580470-mRNA-1:cds;Parent=Msa0580470-mRNA-1
chr4_1 CDS 85563913 85563999 85563913 ID=Msa0580470-mRNA-1:cds;Parent=Msa0580470-mRNA-1
chr4_1 CDS 85563591 85563679 85563591 ID=Msa0580470-mRNA-1:cds;Parent=Msa0580470-mRNA-1
chr4_1 CDS 85562203 85562287 85562203 ID=Msa0580470-mRNA-1:cds;Parent=Msa0580470-mRNA-1
chr4_1 CDS 85561260 85561313 85561260 ID=Msa0580470-mRNA-1:cds;Parent=Msa0580470-mRNA-1
chr4_1 CDS 85560428 85560508 85560428 ID=Msa0580470-mRNA-1:cds;Parent=Msa0580470-mRNA-1
chr4_1 CDS 85559732 85559809 85559732 ID=Msa0580470-mRNA-1:cds;Parent=Msa0580470-mRNA-1
chr4_1 CDS 85558330 85558569 85558330 ID=Msa0580470-mRNA-1:cds;Parent=Msa0580470-mRNA-1
chr4_1 CDS 85556768 85556875 85556768 ID=Msa0580470-mRNA-1:cds;Parent=Msa0580470-mRNA-1
chr4_1 CDS 85556615 85556671 85556615 ID=Msa0580470-mRNA-1:cds;Parent=Msa0580470-mRNA-1
chr4_1 three_prime_UTR 85556343 85556614 85556343 ID=Msa0580470-mRNA-1:three_prime_utr;Parent=Msa0580470-mRNA-1
chr4_1 three_prime_UTR 85555477 85555677 85555477 ID=Msa0580470-mRNA-1:three_prime_utr;Parent=Msa0580470-mRNA-1
Gene Sequence

>Msa0580470

ATGATGGAACAAAACTCTGAACAAGACAATCGTGAACTCTACGCAATCCTCAACCTCTCACCCGAATCCTCCGACGAAGAAATCCGCAAAGCTTATCGTCAATGGGCACAAGCATATCATCCAGACAAGTACCAAAATCCTCTCATGAAAGATGCTGCCACTGAGAATTTTCAACGAGTTTGTGAAGCTTATGAGATTCTTTCAGATCCGAATAAGAGACAGGTTTATGATATTTATGGTATGGAAGGATTGAAATCTGGTTTGGAACTTGGTTCGAGGTTGGACAGAGCTGAAGAGATTAAAGCCGAGTTGGAGAGGTTGAAGAGAAGAAGGGAACATGAGAAGATGGTGGCAAGTTTTCAATCTTCCGGGACGATTTTGGCTAATTTGTCTGTGCCGCAGTATTTAGATGGTGACGGTCTCTTTAGAGGAATGGCAATGACGAGTGAAGTTCAGTCTCAATTGTCAAAACGAAATGTTGTTGGGATTGGCGGCAATTTAGCAGTTGAAGGACATCAAGGTGGTGGAGCTGCTAATGCTGTATTAAGTCATCAACTTTCTGAGGCTTCGTCAATAGAATTTATTGCTTCAGCCGGTTTACGTTCACTAATTGGAGTGCAGACATCACGCGTTATATCATCACACTCATCTGCAACAGCAGGCTTAACAATGTCTTTGAGAGATGGTTCGTTGAATCTTTCTAATGCATGGACCCGCCAGCTGTCAGAAACAACAAATGGACATATACAACTCATGTTGGGATCACAACCATCTGTAGCTGTAGGGTGGAAGAAAGAAGACGAGAAAAGGACTGCCACTGCAGATGTGAAGCTCGGCACAGGTCCTTTCGAGACATCAGCTCGGTATACTCATCGATTTTCTTCTAAATCTCATGGCTGCATTGGAGGAAGATTTGGGAGCTCTTCCATTGAGATGGAAGTTGGTGGTGGAAGGAAGTTATCCAAATTCAGTACTGTGCGCTGGTTGTATGTAGTAGGACTTCAGGGTATTTCCTGGAGATTTGAATTCTGTCGTGGGGGTCAGAAGTTGATTATTCCTATTTTGCTGACGAATCATTTGAACCCTATGTTTGCTACTGGAGCGTTAGTTATTCCAGCATCGTTTTACTTTGTTCTGAAGAAATTTGTCATTAAACCGTATTACCTTAAAAGGAATAAGCAGAAGGCTCTAGAGAAGGAGGGAAAAACTTCTACTCAGGTTCAAGAAGCAAGGGCAGCAGCAGAAAAAGCTCAGAAATTACAACAAAATGTAGCTAATAGGAAAAGAAACAAGCAATTAGAAACGGGTGGACTGGTTGTTATGAAAGCGCTATATGGAAGTGATACAGTTTTGAACAACTTGTATTCGTCAAATGGAACAAGTTTTGAATCTACTTCAGGAGTCATTGATGTTACAACACCTCTGAATTTTCTAGTTAATGATTCTGGTCAACTTAAGCTTCACGAAGGTGTAAAGAAATCAGGAATCATGGGATTTTGTGATCCTTGTCCAGGAGAAACTAAACTGTTGTATGTAGAGTACGCTCATGCCGGCAATCAACACAAGGTATTGGTTGGTGACTATGAACAATTAGTGATACCCCAGGGCATCCACAGGATATAA
Protein sequence

>Msa0580470

MMEQNSEQDNRELYAILNLSPESSDEEIRKAYRQWAQAYHPDKYQNPLMKDAATENFQRVCEAYEILSDPNKRQVYDIYGMEGLKSGLELGSRLDRAEEIKAELERLKRRREHEKMVASFQSSGTILANLSVPQYLDGDGLFRGMAMTSEVQSQLSKRNVVGIGGNLAVEGHQGGGAANAVLSHQLSEASSIEFIASAGLRSLIGVQTSRVISSHSSATAGLTMSLRDGSLNLSNAWTRQLSETTNGHIQLMLGSQPSVAVGWKKEDEKRTATADVKLGTGPFETSARYTHRFSSKSHGCIGGRFGSSSIEMEVGGGRKLSKFSTVRWLYVVGLQGISWRFEFCRGGQKLIIPILLTNHLNPMFATGALVIPASFYFVLKKFVIKPYYLKRNKQKALEKEGKTSTQVQEARAAAEKAQKLQQNVANRKRNKQLETGGLVVMKALYGSDTVLNNLYSSNGTSFESTSGVIDVTTPLNFLVNDSGQLKLHEGVKKSGIMGFCDPCPGETKLLYVEYAHAGNQHKVLVGDYEQLVIPQGIHRI*