Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0833920 | XP_024640429.1 | 93.349 | 421 | 27 | 1 | 1 | 420 | 1 | 421 | 0.0 | 792 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0833920 | sp|Q9FLC2|MO3_ARATH | 35.248 | 383 | 229 | 7 | 44 | 412 | 7 | 384 | 1.23e-76 | 246 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0833920 | A0A396HMS3 | 93.349 | 421 | 27 | 1 | 1 | 420 | 1 | 421 | 0.0 | 792 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0833920 | Msa0834150 | 0.988967 | 3.829018e-176 | -8.615850e-47 |
| Msa0833920 | Msa1388060 | 0.988981 | 3.369365e-176 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0833920 | MtrunA17_Chr5g0399671 | 93.349 | 421 | 27 | 1 | 1 | 420 | 1 | 421 | 0.0 | 792 |
| Msa0833920 | MtrunA17_Chr5g0399661 | 87.621 | 412 | 45 | 4 | 1 | 412 | 3 | 408 | 0.0 | 727 |
| Msa0833920 | MtrunA17_Chr1g0211181 | 42.857 | 378 | 206 | 5 | 43 | 412 | 9 | 384 | 1.05e-97 | 298 |
| Msa0833920 | MtrunA17_Chr1g0211141 | 40.741 | 378 | 215 | 4 | 43 | 412 | 2 | 378 | 9.42e-85 | 264 |
| Msa0833920 | MtrunA17_Chr1g0211171 | 40.576 | 382 | 211 | 5 | 46 | 412 | 9 | 389 | 1.95e-82 | 259 |
| Msa0833920 | MtrunA17_Chr1g0197161 | 40.104 | 384 | 217 | 5 | 41 | 412 | 4 | 386 | 3.24e-82 | 258 |
| Msa0833920 | MtrunA17_Chr1g0211151 | 37.240 | 384 | 228 | 5 | 41 | 412 | 4 | 386 | 3.91e-70 | 227 |
| Msa0833920 | MtrunA17_Chr4g0018001 | 28.500 | 200 | 133 | 3 | 205 | 394 | 2 | 201 | 1.62e-23 | 98.6 |
| Msa0833920 | MtrunA17_Chr8g0375081 | 27.027 | 370 | 235 | 14 | 46 | 392 | 83 | 440 | 3.18e-23 | 102 |
| Msa0833920 | MtrunA17_Chr4g0017991 | 40.000 | 130 | 58 | 1 | 43 | 172 | 6 | 115 | 8.48e-23 | 95.1 |
| Msa0833920 | MtrunA17_Chr5g0402211 | 25.789 | 380 | 245 | 13 | 37 | 392 | 69 | 435 | 9.36e-23 | 100 |
| Msa0833920 | MtrunA17_Chr4g0017951 | 53.521 | 71 | 33 | 0 | 43 | 113 | 6 | 76 | 2.82e-20 | 84.7 |
| Msa0833920 | MtrunA17_Chr4g0010391 | 28.980 | 245 | 161 | 8 | 143 | 383 | 166 | 401 | 9.30e-20 | 91.3 |
| Msa0833920 | MtrunA17_Chr4g0017981 | 32.203 | 118 | 74 | 1 | 283 | 394 | 4 | 121 | 1.39e-12 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0833920 | AT2G35660.1 | 67.164 | 402 | 131 | 1 | 11 | 412 | 13 | 413 | 0.0 | 564 |
| Msa0833920 | AT2G29720.1 | 65.271 | 406 | 138 | 2 | 8 | 412 | 8 | 411 | 0.0 | 534 |
| Msa0833920 | AT2G35660.2 | 69.900 | 299 | 90 | 0 | 114 | 412 | 1 | 299 | 6.79e-160 | 453 |
| Msa0833920 | AT2G35660.3 | 69.900 | 299 | 90 | 0 | 114 | 412 | 1 | 299 | 6.79e-160 | 453 |
| Msa0833920 | AT5G05320.1 | 35.248 | 383 | 229 | 7 | 44 | 412 | 7 | 384 | 1.25e-77 | 246 |
| Msa0833920 | AT4G38540.1 | 35.156 | 384 | 227 | 6 | 46 | 415 | 9 | 384 | 1.19e-71 | 231 |
| Msa0833920 | AT4G15760.1 | 32.676 | 355 | 217 | 7 | 54 | 394 | 39 | 385 | 3.05e-51 | 178 |
| Msa0833920 | AT4G15760.2 | 32.231 | 363 | 220 | 7 | 54 | 394 | 39 | 397 | 6.14e-51 | 177 |
| Msa0833920 | AT4G15765.1 | 27.451 | 306 | 162 | 7 | 46 | 339 | 6 | 263 | 4.56e-25 | 103 |
| Msa0833920 | AT5G67030.1 | 26.301 | 346 | 221 | 12 | 35 | 360 | 72 | 403 | 3.35e-23 | 102 |
| Msa0833920 | AT5G67030.2 | 26.301 | 346 | 221 | 12 | 35 | 360 | 72 | 403 | 4.38e-23 | 102 |
| Msa0833920 | AT4G15765.2 | 26.994 | 163 | 108 | 3 | 183 | 339 | 33 | 190 | 2.52e-12 | 65.9 |
| Msa0833920 | AT4G15765.5 | 26.994 | 163 | 108 | 3 | 183 | 339 | 33 | 190 | 2.52e-12 | 65.9 |
| Msa0833920 | AT4G15765.3 | 26.994 | 163 | 108 | 3 | 183 | 339 | 33 | 190 | 2.52e-12 | 65.9 |
| Msa0833920 | AT4G15765.4 | 26.994 | 163 | 108 | 3 | 183 | 339 | 33 | 190 | 2.52e-12 | 65.9 |
Find 124 sgRNAs with CRISPR-Local
Find 229 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGAGCCTTGATTGTTAATT+TGG | 0.116957 | 5_4:+7015679 | None:intergenic |
| ATGTCTCAACAGATTGTAAT+AGG | 0.209668 | 5_4:-7013864 | Msa0833920:intron |
| GGATACCTTCTTGGAATTCT+TGG | 0.225203 | 5_4:-7014185 | Msa0833920:CDS |
| CAGGCTTGGTGTTCGGTCTT+TGG | 0.226551 | 5_4:-7015313 | Msa0833920:CDS |
| ACCCACAAGGTTTGCCAGTA+TGG | 0.279042 | 5_4:+7013178 | None:intergenic |
| AGGTTTGCCAGTATGGTTAT+TGG | 0.287423 | 5_4:+7013185 | None:intergenic |
| TACACTTTGGTTGGAGAAAC+AGG | 0.298074 | 5_4:+7013678 | None:intergenic |
| CAAGCTCCTTGCCCAAGATT+TGG | 0.304518 | 5_4:+7013329 | None:intergenic |
| TGCCCAAGATTTGGAGTCAT+TGG | 0.325151 | 5_4:+7013338 | None:intergenic |
| TTGCCTTGTCGTACCAGAAT+TGG | 0.332839 | 5_4:-7015716 | Msa0833920:CDS |
| TCCAAATGGGGATACCTTCT+TGG | 0.343769 | 5_4:-7014194 | Msa0833920:CDS |
| AGTGGAGAGGAGGGTACTTT+TGG | 0.353165 | 5_4:-7014287 | Msa0833920:CDS |
| TGGTGTTCGGTCTTTGGTGC+TGG | 0.353894 | 5_4:-7015307 | Msa0833920:CDS |
| CCACAGGTGAATTACATCTA+TGG | 0.363265 | 5_4:-7013726 | Msa0833920:CDS |
| TCTCCACTGCACGCACCTCT+TGG | 0.364886 | 5_4:+7014302 | None:intergenic |
| ATATCGTAGGGATCCAATTC+TGG | 0.369127 | 5_4:+7015703 | None:intergenic |
| GTGAATTACATCTATGGAAA+AGG | 0.372345 | 5_4:-7013720 | Msa0833920:CDS |
| CATCCAATGACTCCAAATCT+TGG | 0.376057 | 5_4:-7013341 | Msa0833920:CDS |
| CTAAGGATCTAGTAGAAAAC+TGG | 0.383052 | 5_4:-7013502 | Msa0833920:CDS |
| CGATTACAACATGTTCCTTT+CGG | 0.387738 | 5_4:+7015645 | None:intergenic |
| TATAGTCTTGACTCCATTGA+TGG | 0.389182 | 5_4:-7013435 | Msa0833920:CDS |
| TCCAAGAAGGTATCCCCATT+TGG | 0.398453 | 5_4:+7014193 | None:intergenic |
| TGCTTTGAATTTCAAAGAAA+AGG | 0.412896 | 5_4:-7015030 | Msa0833920:CDS |
| TGGAGGGCACTTGATTCAAT+TGG | 0.413951 | 5_4:-7015228 | Msa0833920:CDS |
| ACCTTCTTGGAATTCTTGGA+TGG | 0.417941 | 5_4:-7014181 | Msa0833920:CDS |
| AAAAGGTTGTCCATCTGAAT+AGG | 0.421700 | 5_4:+7013752 | None:intergenic |
| TTTCTCCAACCAAAGTGTAT+TGG | 0.421909 | 5_4:-7013674 | Msa0833920:CDS |
| TCCATTATGTTTAGTAGCTC+CGG | 0.421971 | 5_4:+7013476 | None:intergenic |
| GAATTTCCAGGCTTGGTGTT+CGG | 0.422569 | 5_4:-7015320 | Msa0833920:intron |
| TCCGGAGCTACTAAACATAA+TGG | 0.432269 | 5_4:-7013477 | Msa0833920:CDS |
| CATTGATGGATCGATGGCTT+TGG | 0.441676 | 5_4:-7013421 | Msa0833920:CDS |
| ATGTTAGGAACAATATTGTC+AGG | 0.445129 | 5_4:-7013121 | Msa0833920:CDS |
| AAGATTGAACCAAGTCCAAA+TGG | 0.447760 | 5_4:-7014208 | Msa0833920:CDS |
| ACCATACTGGCAAACCTTGT+GGG | 0.451653 | 5_4:-7013179 | Msa0833920:CDS |
| ACTCAATATTTAGAAATTCA+AGG | 0.453429 | 5_4:-7015186 | Msa0833920:CDS |
| AGGAGCTTGTTGTGCTCTTG+AGG | 0.453532 | 5_4:-7013315 | Msa0833920:CDS |
| CATATTTCCAATAACCATAC+TGG | 0.459252 | 5_4:-7013192 | Msa0833920:CDS |
| CTTCTTTAGCACCGATGGCT+CGG | 0.460032 | 5_4:+7013529 | None:intergenic |
| ATCGTGGGTGGTGGCATAGC+AGG | 0.462878 | 5_4:-7015626 | Msa0833920:CDS |
| TTGTTAATTTGGAATATCGT+AGG | 0.467403 | 5_4:+7015690 | None:intergenic |
| ACCGATGGCTCGGTTGTTTG+AGG | 0.467547 | 5_4:+7013539 | None:intergenic |
| ATCTTCAATAGTTCATCTGC+AGG | 0.468683 | 5_4:-7013645 | Msa0833920:intron |
| CAACTGCTCTATCCCTTCAC+AGG | 0.470796 | 5_4:-7015598 | Msa0833920:intron |
| GCACAATAACCAACGTACTT+TGG | 0.472989 | 5_4:+7013792 | None:intergenic |
| ATCCAATGACTCCAAATCTT+GGG | 0.473366 | 5_4:-7013340 | Msa0833920:CDS |
| ACAACTCTACCTCTAGAAAC+AGG | 0.473445 | 5_4:+7013383 | None:intergenic |
| AAGGTATCCCCATTTGGACT+TGG | 0.476269 | 5_4:+7014199 | None:intergenic |
| ATACCATTCAATATTCTTCA+CGG | 0.476649 | 5_4:-7014237 | Msa0833920:CDS |
| ACAAACCAATACACTTTGGT+TGG | 0.478803 | 5_4:+7013669 | None:intergenic |
| AGGTGCGTGCAGTGGAGAGG+AGG | 0.485424 | 5_4:-7014297 | Msa0833920:CDS |
| GCTTGCTTCTTTAGCACCGA+TGG | 0.486635 | 5_4:+7013524 | None:intergenic |
| AGATTGAACCAAGTCCAAAT+GGG | 0.490772 | 5_4:-7014207 | Msa0833920:CDS |
| GAAGAATATTGAATGGTATC+CGG | 0.493585 | 5_4:+7014241 | None:intergenic |
| TGTCTCAACAGATTGTAATA+GGG | 0.495956 | 5_4:-7013863 | Msa0833920:intron |
| CCTTCTTGGAATTCTTGGAT+GGG | 0.498261 | 5_4:-7014180 | Msa0833920:CDS |
| TGTTAATTTGGAATATCGTA+GGG | 0.498991 | 5_4:+7015691 | None:intergenic |
| TGAATTACATCTATGGAAAA+GGG | 0.502725 | 5_4:-7013719 | Msa0833920:CDS |
| ACCCGCTGGTGTGTTATGTT+AGG | 0.502830 | 5_4:-7013136 | Msa0833920:CDS |
| CTCAATATTTAGAAATTCAA+GGG | 0.504248 | 5_4:-7015185 | Msa0833920:intron |
| CAGTCAGAGTCACTTAGAAC+TGG | 0.505114 | 5_4:-7015282 | Msa0833920:CDS |
| CATTCAATATTCTTCACGGT+TGG | 0.508130 | 5_4:-7014233 | Msa0833920:CDS |
| GTCAAGACTATAGTGTCATC+CGG | 0.508571 | 5_4:+7013446 | None:intergenic |
| TAATTCACCTGTGGTTGAAA+AGG | 0.521016 | 5_4:+7013735 | None:intergenic |
| GAAACAGGTGGATTTATCAA+TGG | 0.522659 | 5_4:+7013398 | None:intergenic |
| CGGAGGTAGTTGTCCATCCA+AGG | 0.524864 | 5_4:+7014261 | None:intergenic |
| GATCATATGGCAATGAAAGA+TGG | 0.528214 | 5_4:-7013220 | Msa0833920:CDS |
| GATGACAAACCAATACACTT+TGG | 0.530182 | 5_4:+7013665 | None:intergenic |
| TCCTAACATAACACACCAGC+GGG | 0.532706 | 5_4:+7013135 | None:intergenic |
| AGAGGTAGAGTTGTACTCGT+TGG | 0.533800 | 5_4:-7013374 | Msa0833920:CDS |
| ATATTCCAAATTAACAATCA+AGG | 0.535648 | 5_4:-7015684 | Msa0833920:CDS |
| TGTGGGTTCGATTTCGCAGT+GGG | 0.537467 | 5_4:-7013162 | Msa0833920:CDS |
| TGACTCCATTGATGGATCGA+TGG | 0.537732 | 5_4:-7013427 | Msa0833920:CDS |
| TTGTGCTCTTGAGGATGCAG+TGG | 0.539243 | 5_4:-7013306 | Msa0833920:CDS |
| TCCTCAAACAACCGAGCCAT+CGG | 0.543389 | 5_4:-7013540 | Msa0833920:CDS |
| CAACCGTGAAGAATATTGAA+TGG | 0.545947 | 5_4:+7014234 | None:intergenic |
| AACCATACTGGCAAACCTTG+TGG | 0.548839 | 5_4:-7013180 | Msa0833920:CDS |
| AAGAGGTGCGTGCAGTGGAG+AGG | 0.550530 | 5_4:-7014300 | Msa0833920:CDS |
| CTTGGATGGACAACTACCTC+CGG | 0.550873 | 5_4:-7014260 | Msa0833920:CDS |
| CAAAGCCATCGATCCATCAA+TGG | 0.553794 | 5_4:+7013422 | None:intergenic |
| TTGTACTCGTTGGAGACGCT+TGG | 0.555295 | 5_4:-7013364 | Msa0833920:CDS |
| CAGCCAAGAGGTGCGTGCAG+TGG | 0.558479 | 5_4:-7014305 | Msa0833920:CDS |
| GTTGGTTATTGTGCTTTCCG+TGG | 0.559926 | 5_4:-7013783 | Msa0833920:CDS |
| TATGGAAAAGGGTTACGTGC+AGG | 0.561657 | 5_4:-7013708 | Msa0833920:CDS |
| TCTAGTAGAAAACTGGCCTC+CGG | 0.564302 | 5_4:-7013495 | Msa0833920:CDS |
| TGGGTCTAAAATACTTGCAA+AGG | 0.566510 | 5_4:-7014161 | Msa0833920:intron |
| TTCGATCGCCGATAGCTAAG+TGG | 0.571348 | 5_4:-7013830 | Msa0833920:CDS |
| GTACGACAAGGCAATGATGT+AGG | 0.573750 | 5_4:+7015725 | None:intergenic |
| AATCCCATCCACTTAGCTAT+CGG | 0.574558 | 5_4:+7013822 | None:intergenic |
| GGACTTGCCTCCTATTCAGA+TGG | 0.575892 | 5_4:-7013762 | Msa0833920:CDS |
| CCATAGATGTAATTCACCTG+TGG | 0.586219 | 5_4:+7013726 | None:intergenic |
| AAAGGAACATGTTGTAATCG+TGG | 0.586526 | 5_4:-7015642 | Msa0833920:CDS |
| AAGGAACATGTTGTAATCGT+GGG | 0.588781 | 5_4:-7015641 | Msa0833920:CDS |
| ATCGCCGATAGCTAAGTGGA+TGG | 0.589305 | 5_4:-7013826 | Msa0833920:CDS |
| GGTGCGTGCAGTGGAGAGGA+GGG | 0.589579 | 5_4:-7014296 | Msa0833920:CDS |
| CCCATCCAAGAATTCCAAGA+AGG | 0.591085 | 5_4:+7014180 | None:intergenic |
| ATGACTCCAAATCTTGGGCA+AGG | 0.595031 | 5_4:-7013335 | Msa0833920:CDS |
| TCAGAGTCACTTAGAACTGG+TGG | 0.596903 | 5_4:-7015279 | Msa0833920:CDS |
| AGGTTGTCCATCTGAATAGG+AGG | 0.597237 | 5_4:+7013755 | None:intergenic |
| ATAAATCCACCTGTTTCTAG+AGG | 0.600625 | 5_4:-7013392 | Msa0833920:CDS |
| CATGTTGTAATCGTGGGTGG+TGG | 0.604156 | 5_4:-7015635 | Msa0833920:CDS |
| ACTAGAGTTGAAACCTGTGA+AGG | 0.613474 | 5_4:+7015585 | None:intergenic |
| TCAATCTTCTGATGTCCGAA+AGG | 0.615839 | 5_4:-7015660 | Msa0833920:CDS |
| CAGATTGTAATAGGGTGCGA+CGG | 0.616990 | 5_4:-7013855 | Msa0833920:CDS |
| TTGTGGGTTCGATTTCGCAG+TGG | 0.617057 | 5_4:-7013163 | Msa0833920:CDS |
| CTAGAGTTGAAACCTGTGAA+GGG | 0.619680 | 5_4:+7015586 | None:intergenic |
| TGTTAGGAACAATATTGTCA+GGG | 0.626479 | 5_4:-7013120 | Msa0833920:CDS |
| TCGCCGATAGCTAAGTGGAT+GGG | 0.626839 | 5_4:-7013825 | Msa0833920:CDS |
| GGTGCTAAAGAAGCAAGCTA+AGG | 0.629803 | 5_4:-7013519 | Msa0833920:CDS |
| AAACATAATGGATTCTACGC+CGG | 0.635624 | 5_4:-7013465 | Msa0833920:CDS |
| GATTGAACCAAGTCCAAATG+GGG | 0.644561 | 5_4:-7014206 | Msa0833920:CDS |
| ATTTCAAAGAAAAGGACGAA+AGG | 0.644711 | 5_4:-7015022 | Msa0833920:intron |
| ATTATGTTTAGTAGCTCCGG+AGG | 0.647657 | 5_4:+7013479 | None:intergenic |
| CTGAATAGGAGGCAAGTCCA+CGG | 0.650582 | 5_4:+7013766 | None:intergenic |
| ATATTGTCAGGGACAGAGCG+AGG | 0.652754 | 5_4:-7013109 | Msa0833920:CDS |
| TGGGCTATTGTGCAGCCAAG+AGG | 0.656706 | 5_4:-7014317 | Msa0833920:intron |
| ATTGTGTTGAAATCTGAGGA+TGG | 0.657886 | 5_4:-7015065 | Msa0833920:CDS |
| ACTCTACCTCTAGAAACAGG+TGG | 0.665384 | 5_4:+7013386 | None:intergenic |
| GAAGGGATAGAGCAGTTGCA+AGG | 0.666482 | 5_4:+7015603 | None:intergenic |
| TTCCTAACATAACACACCAG+CGG | 0.671082 | 5_4:+7013134 | None:intergenic |
| CAGGATTGTGTTGAAATCTG+AGG | 0.674897 | 5_4:-7015069 | Msa0833920:CDS |
| GAATATTGAATGGTATCCGG+AGG | 0.679865 | 5_4:+7014244 | None:intergenic |
| ACTGCGAAATCGAACCCACA+AGG | 0.681244 | 5_4:+7013165 | None:intergenic |
| GATCCAATTCTGGTACGACA+AGG | 0.683776 | 5_4:+7015713 | None:intergenic |
| GAACATGTTGTAATCGTGGG+TGG | 0.726429 | 5_4:-7015638 | Msa0833920:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAGATATTTATCATTAT+TGG | - | chr5_4:7013937-7013956 | Msa0833920:intron | 10.0% |
| !! | AATTATTTATGAAATGTATA+TGG | - | chr5_4:7014527-7014546 | Msa0833920:intron | 10.0% |
| !! | ATTATTTATGAAATGTATAT+GGG | - | chr5_4:7014528-7014547 | Msa0833920:intron | 10.0% |
| !!! | TTTACATTCACTTTTTTATT+AGG | + | chr5_4:7014102-7014121 | None:intergenic | 15.0% |
| !!! | ATATATTTGTCTTTTGTAAA+AGG | + | chr5_4:7014214-7014233 | None:intergenic | 15.0% |
| !! | AACTTAGTTGAAAAAATATT+TGG | - | chr5_4:7014803-7014822 | Msa0833920:intron | 15.0% |
| !! | GTAATTTAACTATATATGTA+TGG | + | chr5_4:7015260-7015279 | None:intergenic | 15.0% |
| !! | ATATTCCAAATTAACAATCA+AGG | - | chr5_4:7013180-7013199 | Msa0833920:CDS | 20.0% |
| !! | ACTCAATATTTAGAAATTCA+AGG | - | chr5_4:7013678-7013697 | Msa0833920:CDS | 20.0% |
| !! | CTCAATATTTAGAAATTCAA+GGG | - | chr5_4:7013679-7013698 | Msa0833920:CDS | 20.0% |
| !!! | CTAAATAATGTAGAGTTTTA+TGG | + | chr5_4:7013982-7014001 | None:intergenic | 20.0% |
| !! | AAATTCATTTCTAAATTGTG+GGG | + | chr5_4:7014042-7014061 | None:intergenic | 20.0% |
| !! | GAAATTCATTTCTAAATTGT+GGG | + | chr5_4:7014043-7014062 | None:intergenic | 20.0% |
| !! | TGAAATTCATTTCTAAATTG+TGG | + | chr5_4:7014044-7014063 | None:intergenic | 20.0% |
| !! | TTACAAAAGACAAATATATG+AGG | - | chr5_4:7014215-7014234 | Msa0833920:CDS | 20.0% |
| !! | TACAAAAGACAAATATATGA+GGG | - | chr5_4:7014216-7014235 | Msa0833920:CDS | 20.0% |
| !! | AGTTCGTAAAAAATTAATCA+CGG | + | chr5_4:7014787-7014806 | None:intergenic | 20.0% |
| !! | TGTTAATTTGGAATATCGTA+GGG | + | chr5_4:7013176-7013195 | None:intergenic | 25.0% |
| !! | TTGTTAATTTGGAATATCGT+AGG | + | chr5_4:7013177-7013196 | None:intergenic | 25.0% |
| !! | TGATTTTCTCAAACTATTAG+CGG | + | chr5_4:7013366-7013385 | None:intergenic | 25.0% |
| !! | TGCTTTGAATTTCAAAGAAA+AGG | - | chr5_4:7013834-7013853 | Msa0833920:CDS | 25.0% |
| !!! | TATCATTATTGGTTTTTGTC+CGG | - | chr5_4:7013948-7013967 | Msa0833920:intron | 25.0% |
| ! | AAAGAAAGACAAAAATCTGA+AGG | - | chr5_4:7014133-7014152 | Msa0833920:intron | 25.0% |
| ! | AATCATTTATAAACTATCCC+TGG | + | chr5_4:7014414-7014433 | None:intergenic | 25.0% |
| ! | TTTAGTCATTGATACATAGT+TGG | - | chr5_4:7014502-7014521 | Msa0833920:intron | 25.0% |
| ! | ATACCATTCAATATTCTTCA+CGG | - | chr5_4:7014627-7014646 | Msa0833920:intron | 25.0% |
| !! | ATTGACTCATTGTGATTTAT+GGG | - | chr5_4:7014732-7014751 | Msa0833920:intron | 25.0% |
| ! | AAAGGATCTTACAAACATAA+TGG | - | chr5_4:7014928-7014947 | Msa0833920:intron | 25.0% |
| !!! | TCAATTTGTTAGCAGTTTTT+AGG | + | chr5_4:7014976-7014995 | None:intergenic | 25.0% |
| ! | TGAATTACATCTATGGAAAA+GGG | - | chr5_4:7015145-7015164 | Msa0833920:intron | 25.0% |
| ! | TTTCATCTGAACAATAAACT+CGG | + | chr5_4:7015282-7015301 | None:intergenic | 25.0% |
| ! | TGAAAAATAGTTGAGTTCTA+TGG | - | chr5_4:7015297-7015316 | Msa0833920:CDS | 25.0% |
| TTGAGCCTTGATTGTTAATT+TGG | + | chr5_4:7013188-7013207 | None:intergenic | 30.0% | |
| TGGTGATAAAGAATAGATTG+AGG | + | chr5_4:7013306-7013325 | None:intergenic | 30.0% | |
| ! | CCATCATTACTTTGATAACA+CGG | - | chr5_4:7013323-7013342 | Msa0833920:CDS | 30.0% |
| GATATAAGAATTGTGCAACA+AGG | + | chr5_4:7013740-7013759 | None:intergenic | 30.0% | |
| GTTCATAAATTTGGCTATAC+AGG | - | chr5_4:7013776-7013795 | Msa0833920:CDS | 30.0% | |
| ATTTCAAAGAAAAGGACGAA+AGG | - | chr5_4:7013842-7013861 | Msa0833920:CDS | 30.0% | |
| GAAATGAATTTCACATGAAG+TGG | - | chr5_4:7014051-7014070 | Msa0833920:intron | 30.0% | |
| !! | GAAGTATTGTGCTTTGTAAA+AGG | + | chr5_4:7014456-7014475 | None:intergenic | 30.0% |
| AGCACAATACTTCGAAAATT+TGG | - | chr5_4:7014463-7014482 | Msa0833920:intron | 30.0% | |
| AATACTTCGAAAATTTGGCT+TGG | - | chr5_4:7014468-7014487 | Msa0833920:intron | 30.0% | |
| ! | ATACTTCGAAAATTTGGCTT+GGG | - | chr5_4:7014469-7014488 | Msa0833920:intron | 30.0% |
| GAAGAATATTGAATGGTATC+CGG | + | chr5_4:7014626-7014645 | None:intergenic | 30.0% | |
| !! | CATTGACTCATTGTGATTTA+TGG | - | chr5_4:7014731-7014750 | Msa0833920:intron | 30.0% |
| TTGACTCATTGTGATTTATG+GGG | - | chr5_4:7014733-7014752 | Msa0833920:intron | 30.0% | |
| CTAAAAACATAGTGCACAAA+AGG | - | chr5_4:7014910-7014929 | Msa0833920:intron | 30.0% | |
| ATGTCTCAACAGATTGTAAT+AGG | - | chr5_4:7015000-7015019 | Msa0833920:intron | 30.0% | |
| TGTCTCAACAGATTGTAATA+GGG | - | chr5_4:7015001-7015020 | Msa0833920:intron | 30.0% | |
| GTGAATTACATCTATGGAAA+AGG | - | chr5_4:7015144-7015163 | Msa0833920:intron | 30.0% | |
| CATATTTCCAATAACCATAC+TGG | - | chr5_4:7015672-7015691 | Msa0833920:CDS | 30.0% | |
| ATGTTAGGAACAATATTGTC+AGG | - | chr5_4:7015743-7015762 | Msa0833920:CDS | 30.0% | |
| TGTTAGGAACAATATTGTCA+GGG | - | chr5_4:7015744-7015763 | Msa0833920:CDS | 30.0% | |
| CGATTACAACATGTTCCTTT+CGG | + | chr5_4:7013222-7013241 | None:intergenic | 35.0% | |
| AAAGGAACATGTTGTAATCG+TGG | - | chr5_4:7013222-7013241 | Msa0833920:CDS | 35.0% | |
| AAGGAACATGTTGTAATCGT+GGG | - | chr5_4:7013223-7013242 | Msa0833920:CDS | 35.0% | |
| CCGTGTTATCAAAGTAATGA+TGG | + | chr5_4:7013326-7013345 | None:intergenic | 35.0% | |
| !! | GTTGAACTTGTTGAATTTCC+AGG | - | chr5_4:7013532-7013551 | Msa0833920:CDS | 35.0% |
| ! | CTTGAGCTGGTTCATAAATT+TGG | - | chr5_4:7013767-7013786 | Msa0833920:CDS | 35.0% |
| ATTGTGTTGAAATCTGAGGA+TGG | - | chr5_4:7013799-7013818 | Msa0833920:CDS | 35.0% | |
| AGGTATATAATTCTGCTGTG+TGG | - | chr5_4:7013862-7013881 | Msa0833920:intron | 35.0% | |
| TGGTTAGATCCATATGACAT+TGG | - | chr5_4:7014071-7014090 | Msa0833920:intron | 35.0% | |
| TAGGTGAAACCAATGTCATA+TGG | + | chr5_4:7014083-7014102 | None:intergenic | 35.0% | |
| !! | ATACCCTTTAGCCTTAACTA+GGG | - | chr5_4:7014339-7014358 | Msa0833920:intron | 35.0% |
| !!! | TGAGAGGTTTTTTAGTCTAC+TGG | + | chr5_4:7014374-7014393 | None:intergenic | 35.0% |
| !! | TTTGTAAAAGGCGTCTTCAT+AGG | + | chr5_4:7014444-7014463 | None:intergenic | 35.0% |
| CAACCGTGAAGAATATTGAA+TGG | + | chr5_4:7014633-7014652 | None:intergenic | 35.0% | |
| CATTCAATATTCTTCACGGT+TGG | - | chr5_4:7014631-7014650 | Msa0833920:intron | 35.0% | |
| AAGATTGAACCAAGTCCAAA+TGG | - | chr5_4:7014656-7014675 | Msa0833920:intron | 35.0% | |
| AGATTGAACCAAGTCCAAAT+GGG | - | chr5_4:7014657-7014676 | Msa0833920:intron | 35.0% | |
| ! | TGGGTCTAAAATACTTGCAA+AGG | - | chr5_4:7014703-7014722 | Msa0833920:intron | 35.0% |
| AAAAGGTTGTCCATCTGAAT+AGG | + | chr5_4:7015115-7015134 | None:intergenic | 35.0% | |
| TAATTCACCTGTGGTTGAAA+AGG | + | chr5_4:7015132-7015151 | None:intergenic | 35.0% | |
| TTTCTCCAACCAAAGTGTAT+TGG | - | chr5_4:7015190-7015209 | Msa0833920:CDS | 35.0% | |
| ACAAACCAATACACTTTGGT+TGG | + | chr5_4:7015198-7015217 | None:intergenic | 35.0% | |
| GATGACAAACCAATACACTT+TGG | + | chr5_4:7015202-7015221 | None:intergenic | 35.0% | |
| ATCTTCAATAGTTCATCTGC+AGG | - | chr5_4:7015219-7015238 | Msa0833920:CDS | 35.0% | |
| AAATAGTTGAGTTCTATGGC+AGG | - | chr5_4:7015301-7015320 | Msa0833920:CDS | 35.0% | |
| CTAAGGATCTAGTAGAAAAC+TGG | - | chr5_4:7015362-7015381 | Msa0833920:intron | 35.0% | |
| TCCATTATGTTTAGTAGCTC+CGG | + | chr5_4:7015391-7015410 | None:intergenic | 35.0% | |
| !! | AAACATAATGGATTCTACGC+CGG | - | chr5_4:7015399-7015418 | Msa0833920:intron | 35.0% |
| ! | TATAGTCTTGACTCCATTGA+TGG | - | chr5_4:7015429-7015448 | Msa0833920:intron | 35.0% |
| ! | GAAACAGGTGGATTTATCAA+TGG | + | chr5_4:7015469-7015488 | None:intergenic | 35.0% |
| !! | ATAAATCCACCTGTTTCTAG+AGG | - | chr5_4:7015472-7015491 | Msa0833920:intron | 35.0% |
| ATCCAATGACTCCAAATCTT+GGG | - | chr5_4:7015524-7015543 | Msa0833920:intron | 35.0% | |
| ! | GAAGACGCTTTTAGATCATA+TGG | - | chr5_4:7015631-7015650 | Msa0833920:CDS | 35.0% |
| GATCATATGGCAATGAAAGA+TGG | - | chr5_4:7015644-7015663 | Msa0833920:CDS | 35.0% | |
| ATATCGTAGGGATCCAATTC+TGG | + | chr5_4:7013164-7013183 | None:intergenic | 40.0% | |
| TCAATCTTCTGATGTCCGAA+AGG | - | chr5_4:7013204-7013223 | Msa0833920:CDS | 40.0% | |
| CTAGAGTTGAAACCTGTGAA+GGG | + | chr5_4:7013281-7013300 | None:intergenic | 40.0% | |
| ACTAGAGTTGAAACCTGTGA+AGG | + | chr5_4:7013282-7013301 | None:intergenic | 40.0% | |
| TCTCAAACTATTAGCGGTGT+CGG | + | chr5_4:7013360-7013379 | None:intergenic | 40.0% | |
| GTGTTATCAGCTATGAAGCA+CGG | + | chr5_4:7013502-7013521 | None:intergenic | 40.0% | |
| ! | ACTTGTTGAATTTCCAGGCT+TGG | - | chr5_4:7013537-7013556 | Msa0833920:CDS | 40.0% |
| TCACTCACCCTTTCCAAAAA+TGG | - | chr5_4:7013612-7013631 | Msa0833920:intron | 40.0% | |
| CACTCACCCTTTCCAAAAAT+GGG | - | chr5_4:7013613-7013632 | Msa0833920:intron | 40.0% | |
| CAGGATTGTGTTGAAATCTG+AGG | - | chr5_4:7013795-7013814 | Msa0833920:CDS | 40.0% | |
| AGAAACTGAGACTAAGTCGT+CGG | - | chr5_4:7014000-7014019 | Msa0833920:intron | 40.0% | |
| !!! | TGTCTTTTGTAAAAGGTGCC+CGG | + | chr5_4:7014207-7014226 | None:intergenic | 40.0% |
| ! | TGAGGGTTTTTACAACTCTG+TGG | - | chr5_4:7014233-7014252 | Msa0833920:CDS | 40.0% |
| !! | CATACCCTTTAGCCTTAACT+AGG | - | chr5_4:7014338-7014357 | Msa0833920:intron | 40.0% |
| !! | TACCCTTTAGCCTTAACTAG+GGG | - | chr5_4:7014340-7014359 | Msa0833920:intron | 40.0% |
| CTTGATTCTCAAGCAATGAG+AGG | + | chr5_4:7014390-7014409 | None:intergenic | 40.0% | |
| CTCTCATTGCTTGAGAATCA+AGG | - | chr5_4:7014388-7014407 | Msa0833920:intron | 40.0% | |
| !! | TCGAAAATTTGGCTTGGGTT+CGG | - | chr5_4:7014474-7014493 | Msa0833920:intron | 40.0% |
| !! | GTACTTTTGGAAACCTTGGA+TGG | - | chr5_4:7014590-7014609 | Msa0833920:intron | 40.0% |
| GAATATTGAATGGTATCCGG+AGG | + | chr5_4:7014623-7014642 | None:intergenic | 40.0% | |
| GATTGAACCAAGTCCAAATG+GGG | - | chr5_4:7014658-7014677 | Msa0833920:intron | 40.0% | |
| GGATACCTTCTTGGAATTCT+TGG | - | chr5_4:7014679-7014698 | Msa0833920:intron | 40.0% | |
| ACCTTCTTGGAATTCTTGGA+TGG | - | chr5_4:7014683-7014702 | Msa0833920:intron | 40.0% | |
| CCTTCTTGGAATTCTTGGAT+GGG | - | chr5_4:7014684-7014703 | Msa0833920:intron | 40.0% | |
| AAGCTAACCACATGCATGAT+TGG | - | chr5_4:7014879-7014898 | Msa0833920:intron | 40.0% | |
| GTCATAACCAATCATGCATG+TGG | + | chr5_4:7014889-7014908 | None:intergenic | 40.0% | |
| GACCAGAGCTTCATGATTAT+TGG | + | chr5_4:7014954-7014973 | None:intergenic | 40.0% | |
| AATCCCATCCACTTAGCTAT+CGG | + | chr5_4:7015045-7015064 | None:intergenic | 40.0% | |
| ! | TTTTCTGAGCCAAAGTACGT+TGG | - | chr5_4:7015063-7015082 | Msa0833920:CDS | 40.0% |
| GCACAATAACCAACGTACTT+TGG | + | chr5_4:7015075-7015094 | None:intergenic | 40.0% | |
| CCATAGATGTAATTCACCTG+TGG | + | chr5_4:7015141-7015160 | None:intergenic | 40.0% | |
| CCACAGGTGAATTACATCTA+TGG | - | chr5_4:7015138-7015157 | Msa0833920:intron | 40.0% | |
| TACACTTTGGTTGGAGAAAC+AGG | + | chr5_4:7015189-7015208 | None:intergenic | 40.0% | |
| ATTATGTTTAGTAGCTCCGG+AGG | + | chr5_4:7015388-7015407 | None:intergenic | 40.0% | |
| TCCGGAGCTACTAAACATAA+TGG | - | chr5_4:7015387-7015406 | Msa0833920:intron | 40.0% | |
| GTCAAGACTATAGTGTCATC+CGG | + | chr5_4:7015421-7015440 | None:intergenic | 40.0% | |
| ! | ACAACTCTACCTCTAGAAAC+AGG | + | chr5_4:7015484-7015503 | None:intergenic | 40.0% |
| CATCCAATGACTCCAAATCT+TGG | - | chr5_4:7015523-7015542 | Msa0833920:intron | 40.0% | |
| AGGTTTGCCAGTATGGTTAT+TGG | + | chr5_4:7015682-7015701 | None:intergenic | 40.0% | |
| TTCCTAACATAACACACCAG+CGG | + | chr5_4:7015733-7015752 | None:intergenic | 40.0% | |
| GTACGACAAGGCAATGATGT+AGG | + | chr5_4:7013142-7013161 | None:intergenic | 45.0% | |
| TTGCCTTGTCGTACCAGAAT+TGG | - | chr5_4:7013148-7013167 | Msa0833920:CDS | 45.0% | |
| GATCCAATTCTGGTACGACA+AGG | + | chr5_4:7013154-7013173 | None:intergenic | 45.0% | |
| GAACATGTTGTAATCGTGGG+TGG | - | chr5_4:7013226-7013245 | Msa0833920:CDS | 45.0% | |
| TCCTCATATTAGCCGTGATC+CGG | + | chr5_4:7013475-7013494 | None:intergenic | 45.0% | |
| !! | GAATTTCCAGGCTTGGTGTT+CGG | - | chr5_4:7013544-7013563 | Msa0833920:CDS | 45.0% |
| CAGTCAGAGTCACTTAGAAC+TGG | - | chr5_4:7013582-7013601 | Msa0833920:intron | 45.0% | |
| TCAGAGTCACTTAGAACTGG+TGG | - | chr5_4:7013585-7013604 | Msa0833920:intron | 45.0% | |
| TCACCCTTTCCAAAAATGGG+TGG | - | chr5_4:7013616-7013635 | Msa0833920:intron | 45.0% | |
| !! | CCTCCACCCATTTTTGGAAA+GGG | + | chr5_4:7013622-7013641 | None:intergenic | 45.0% |
| CCTTTCCAAAAATGGGTGGA+GGG | - | chr5_4:7013620-7013639 | Msa0833920:intron | 45.0% | |
| !! | TGGAGGGCACTTGATTCAAT+TGG | - | chr5_4:7013636-7013655 | Msa0833920:intron | 45.0% |
| TATATCAGCTGAGCTTGAGC+TGG | - | chr5_4:7013754-7013773 | Msa0833920:CDS | 45.0% | |
| !! | GAGTTTTATGGTGCACTGAC+CGG | + | chr5_4:7013970-7013989 | None:intergenic | 45.0% |
| GAAACTGAGACTAAGTCGTC+GGG | - | chr5_4:7014001-7014020 | Msa0833920:intron | 45.0% | |
| ACTCACACTCTTCAACTACC+CGG | - | chr5_4:7014185-7014204 | Msa0833920:CDS | 45.0% | |
| !!! | GTCTTTTGTAAAAGGTGCCC+GGG | + | chr5_4:7014206-7014225 | None:intergenic | 45.0% |
| TGGACAAGACCTCGAAAATG+TGG | - | chr5_4:7014253-7014272 | Msa0833920:CDS | 45.0% | |
| GAAACATTAGCACGCCACAT+AGG | - | chr5_4:7014285-7014304 | Msa0833920:CDS | 45.0% | |
| GCATACATTCGACTCCTATG+TGG | + | chr5_4:7014302-7014321 | None:intergenic | 45.0% | |
| GAGTCGAATGTATGCCATGT+TGG | - | chr5_4:7014307-7014326 | Msa0833920:intron | 45.0% | |
| TCGAATGTATGCCATGTTGG+AGG | - | chr5_4:7014310-7014329 | Msa0833920:intron | 45.0% | |
| GGTATGTTAGACCTCCAACA+TGG | + | chr5_4:7014324-7014343 | None:intergenic | 45.0% | |
| AGCCCCTAGTTAAGGCTAAA+GGG | + | chr5_4:7014345-7014364 | None:intergenic | 45.0% | |
| TAGCCCCTAGTTAAGGCTAA+AGG | + | chr5_4:7014346-7014365 | None:intergenic | 45.0% | |
| ATTGCTTGAGAATCAAGGCC+AGG | - | chr5_4:7014393-7014412 | Msa0833920:intron | 45.0% | |
| TTGCTTGAGAATCAAGGCCA+GGG | - | chr5_4:7014394-7014413 | Msa0833920:intron | 45.0% | |
| ! | AAGGCGTCTTCATAGGTTGA+GGG | + | chr5_4:7014437-7014456 | None:intergenic | 45.0% |
| !! | AAAGGCGTCTTCATAGGTTG+AGG | + | chr5_4:7014438-7014457 | None:intergenic | 45.0% |
| !!! | GAGGGTACTTTTGGAAACCT+TGG | - | chr5_4:7014586-7014605 | Msa0833920:intron | 45.0% |
| ! | AAGGTATCCCCATTTGGACT+TGG | + | chr5_4:7014668-7014687 | None:intergenic | 45.0% |
| TCCAAATGGGGATACCTTCT+TGG | - | chr5_4:7014670-7014689 | Msa0833920:intron | 45.0% | |
| !! | TCCAAGAAGGTATCCCCATT+TGG | + | chr5_4:7014674-7014693 | None:intergenic | 45.0% |
| CCCATCCAAGAATTCCAAGA+AGG | + | chr5_4:7014687-7014706 | None:intergenic | 45.0% | |
| GGCCAATAATCATGAAGCTC+TGG | - | chr5_4:7014949-7014968 | Msa0833920:intron | 45.0% | |
| CAGATTGTAATAGGGTGCGA+CGG | - | chr5_4:7015009-7015028 | Msa0833920:intron | 45.0% | |
| GTTGGTTATTGTGCTTTCCG+TGG | - | chr5_4:7015081-7015100 | Msa0833920:intron | 45.0% | |
| AGGTTGTCCATCTGAATAGG+AGG | + | chr5_4:7015112-7015131 | None:intergenic | 45.0% | |
| ! | TGGACAACCTTTTCAACCAC+AGG | - | chr5_4:7015122-7015141 | Msa0833920:intron | 45.0% |
| TATGGAAAAGGGTTACGTGC+AGG | - | chr5_4:7015156-7015175 | Msa0833920:intron | 45.0% | |
| GGTGCTAAAGAAGCAAGCTA+AGG | - | chr5_4:7015345-7015364 | Msa0833920:intron | 45.0% | |
| ! | TCTAGTAGAAAACTGGCCTC+CGG | - | chr5_4:7015369-7015388 | Msa0833920:intron | 45.0% |
| ! | TGACTCCATTGATGGATCGA+TGG | - | chr5_4:7015437-7015456 | Msa0833920:intron | 45.0% |
| CAAAGCCATCGATCCATCAA+TGG | + | chr5_4:7015445-7015464 | None:intergenic | 45.0% | |
| ! | CATTGATGGATCGATGGCTT+TGG | - | chr5_4:7015443-7015462 | Msa0833920:intron | 45.0% |
| ! | ACTCTACCTCTAGAAACAGG+TGG | + | chr5_4:7015481-7015500 | None:intergenic | 45.0% |
| AGAGGTAGAGTTGTACTCGT+TGG | - | chr5_4:7015490-7015509 | Msa0833920:intron | 45.0% | |
| ! | TGCCCAAGATTTGGAGTCAT+TGG | + | chr5_4:7015529-7015548 | None:intergenic | 45.0% |
| ATGACTCCAAATCTTGGGCA+AGG | - | chr5_4:7015529-7015548 | Msa0833920:intron | 45.0% | |
| AACCATACTGGCAAACCTTG+TGG | - | chr5_4:7015684-7015703 | Msa0833920:CDS | 45.0% | |
| ACCATACTGGCAAACCTTGT+GGG | - | chr5_4:7015685-7015704 | Msa0833920:CDS | 45.0% | |
| TCCTAACATAACACACCAGC+GGG | + | chr5_4:7015732-7015751 | None:intergenic | 45.0% | |
| CATGTTGTAATCGTGGGTGG+TGG | - | chr5_4:7013229-7013248 | Msa0833920:CDS | 50.0% | |
| GAAGGGATAGAGCAGTTGCA+AGG | + | chr5_4:7013264-7013283 | None:intergenic | 50.0% | |
| CAACTGCTCTATCCCTTCAC+AGG | - | chr5_4:7013266-7013285 | Msa0833920:CDS | 50.0% | |
| GTGTGTGTGTGTGTGTGTGT+TGG | - | chr5_4:7013414-7013433 | Msa0833920:CDS | 50.0% | |
| ! | GTGTGTGTGTGTGTTGGTGT+TGG | - | chr5_4:7013430-7013449 | Msa0833920:CDS | 50.0% |
| TATTAGCCGTGATCCGGTGT+CGG | + | chr5_4:7013469-7013488 | None:intergenic | 50.0% | |
| ACCGGATCACGGCTAATATG+AGG | - | chr5_4:7013471-7013490 | Msa0833920:CDS | 50.0% | |
| CCCTTTCCAAAAATGGGTGG+AGG | - | chr5_4:7013619-7013638 | Msa0833920:intron | 50.0% | |
| !! | CCCTCCACCCATTTTTGGAA+AGG | + | chr5_4:7013623-7013642 | None:intergenic | 50.0% |
| ! | AAGTGCCCTCCACCCATTTT+TGG | + | chr5_4:7013628-7013647 | None:intergenic | 50.0% |
| CTCACACTCTTCAACTACCC+GGG | - | chr5_4:7014186-7014205 | Msa0833920:CDS | 50.0% | |
| ! | GAGCTCAAGCCACATTTTCG+AGG | + | chr5_4:7014265-7014284 | None:intergenic | 50.0% |
| GGAACAGTAGCCCCTAGTTA+AGG | + | chr5_4:7014353-7014372 | None:intergenic | 50.0% | |
| !!! | AGTGGAGAGGAGGGTACTTT+TGG | - | chr5_4:7014577-7014596 | Msa0833920:intron | 50.0% |
| CTTGGATGGACAACTACCTC+CGG | - | chr5_4:7014604-7014623 | Msa0833920:intron | 50.0% | |
| TTCGATCGCCGATAGCTAAG+TGG | - | chr5_4:7015034-7015053 | Msa0833920:CDS | 50.0% | |
| ATCGCCGATAGCTAAGTGGA+TGG | - | chr5_4:7015038-7015057 | Msa0833920:CDS | 50.0% | |
| TCGCCGATAGCTAAGTGGAT+GGG | - | chr5_4:7015039-7015058 | Msa0833920:CDS | 50.0% | |
| CTGAATAGGAGGCAAGTCCA+CGG | + | chr5_4:7015101-7015120 | None:intergenic | 50.0% | |
| GGACTTGCCTCCTATTCAGA+TGG | - | chr5_4:7015102-7015121 | Msa0833920:intron | 50.0% | |
| TCCTCAAACAACCGAGCCAT+CGG | - | chr5_4:7015324-7015343 | Msa0833920:intron | 50.0% | |
| !! | CTTCTTTAGCACCGATGGCT+CGG | + | chr5_4:7015338-7015357 | None:intergenic | 50.0% |
| ! | GCTTGCTTCTTTAGCACCGA+TGG | + | chr5_4:7015343-7015362 | None:intergenic | 50.0% |
| TTGTACTCGTTGGAGACGCT+TGG | - | chr5_4:7015500-7015519 | Msa0833920:intron | 50.0% | |
| CAAGCTCCTTGCCCAAGATT+TGG | + | chr5_4:7015538-7015557 | None:intergenic | 50.0% | |
| !! | AGGAGCTTGTTGTGCTCTTG+AGG | - | chr5_4:7015549-7015568 | Msa0833920:intron | 50.0% |
| TTGTGCTCTTGAGGATGCAG+TGG | - | chr5_4:7015558-7015577 | Msa0833920:intron | 50.0% | |
| ACCCACAAGGTTTGCCAGTA+TGG | + | chr5_4:7015689-7015708 | None:intergenic | 50.0% | |
| ACTGCGAAATCGAACCCACA+AGG | + | chr5_4:7015702-7015721 | None:intergenic | 50.0% | |
| TTGTGGGTTCGATTTCGCAG+TGG | - | chr5_4:7015701-7015720 | Msa0833920:CDS | 50.0% | |
| TGTGGGTTCGATTTCGCAGT+GGG | - | chr5_4:7015702-7015721 | Msa0833920:CDS | 50.0% | |
| ACCCGCTGGTGTGTTATGTT+AGG | - | chr5_4:7015728-7015747 | Msa0833920:CDS | 50.0% | |
| ATATTGTCAGGGACAGAGCG+AGG | - | chr5_4:7015755-7015774 | Msa0833920:CDS | 50.0% | |
| CAAAGACCGAACACCAAGCC+TGG | + | chr5_4:7013553-7013572 | None:intergenic | 55.0% | |
| !! | CAGGCTTGGTGTTCGGTCTT+TGG | - | chr5_4:7013551-7013570 | Msa0833920:intron | 55.0% |
| ! | TGGTGTTCGGTCTTTGGTGC+TGG | - | chr5_4:7013557-7013576 | Msa0833920:intron | 55.0% |
| ACTGAGACTAAGTCGTCGGG+TGG | - | chr5_4:7014004-7014023 | Msa0833920:intron | 55.0% | |
| TGGGCTATTGTGCAGCCAAG+AGG | - | chr5_4:7014547-7014566 | Msa0833920:intron | 55.0% | |
| CGGAGGTAGTTGTCCATCCA+AGG | + | chr5_4:7014606-7014625 | None:intergenic | 55.0% | |
| !! | ACCGATGGCTCGGTTGTTTG+AGG | + | chr5_4:7015328-7015347 | None:intergenic | 55.0% |
| ! | ATCGTGGGTGGTGGCATAGC+AGG | - | chr5_4:7013238-7013257 | Msa0833920:CDS | 60.0% |
| CCACGATACGTGTCCGACAC+CGG | - | chr5_4:7013453-7013472 | Msa0833920:CDS | 60.0% | |
| ACGTGTCCGACACCGGATCA+CGG | - | chr5_4:7013460-7013479 | Msa0833920:CDS | 60.0% | |
| TCTCCACTGCACGCACCTCT+TGG | + | chr5_4:7014565-7014584 | None:intergenic | 60.0% | |
| ! | AAGAGGTGCGTGCAGTGGAG+AGG | - | chr5_4:7014564-7014583 | Msa0833920:intron | 60.0% |
| ! | CCGGTGTCGGACACGTATCG+TGG | + | chr5_4:7013456-7013475 | None:intergenic | 65.0% |
| ! | CAGCCAAGAGGTGCGTGCAG+TGG | - | chr5_4:7014559-7014578 | Msa0833920:intron | 65.0% |
| AGGTGCGTGCAGTGGAGAGG+AGG | - | chr5_4:7014567-7014586 | Msa0833920:intron | 65.0% | |
| GGTGCGTGCAGTGGAGAGGA+GGG | - | chr5_4:7014568-7014587 | Msa0833920:intron | 65.0% | |
| TTCGCAGTGGGACAACCCGC+TGG | - | chr5_4:7015714-7015733 | Msa0833920:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 7013097 | 7015789 | 7013097 | ID=Msa0833920;Name=Msa0833920 |
| chr5_4 | mRNA | 7013097 | 7015789 | 7013097 | ID=Msa0833920-mRNA-1;Parent=Msa0833920;Name=Msa0833920-mRNA-1;_AED=0.33;_eAED=0.33;_QI=0|0.2|0.16|1|1|1|6|0|420 |
| chr5_4 | exon | 7015599 | 7015789 | 7015599 | ID=Msa0833920-mRNA-1:exon:3120;Parent=Msa0833920-mRNA-1 |
| chr5_4 | exon | 7015186 | 7015332 | 7015186 | ID=Msa0833920-mRNA-1:exon:3119;Parent=Msa0833920-mRNA-1 |
| chr5_4 | exon | 7015023 | 7015088 | 7015023 | ID=Msa0833920-mRNA-1:exon:3118;Parent=Msa0833920-mRNA-1 |
| chr5_4 | exon | 7014162 | 7014324 | 7014162 | ID=Msa0833920-mRNA-1:exon:3117;Parent=Msa0833920-mRNA-1 |
| chr5_4 | exon | 7013646 | 7013874 | 7013646 | ID=Msa0833920-mRNA-1:exon:3116;Parent=Msa0833920-mRNA-1 |
| chr5_4 | exon | 7013097 | 7013563 | 7013097 | ID=Msa0833920-mRNA-1:exon:3115;Parent=Msa0833920-mRNA-1 |
| chr5_4 | CDS | 7015599 | 7015789 | 7015599 | ID=Msa0833920-mRNA-1:cds;Parent=Msa0833920-mRNA-1 |
| chr5_4 | CDS | 7015186 | 7015332 | 7015186 | ID=Msa0833920-mRNA-1:cds;Parent=Msa0833920-mRNA-1 |
| chr5_4 | CDS | 7015023 | 7015088 | 7015023 | ID=Msa0833920-mRNA-1:cds;Parent=Msa0833920-mRNA-1 |
| chr5_4 | CDS | 7014162 | 7014324 | 7014162 | ID=Msa0833920-mRNA-1:cds;Parent=Msa0833920-mRNA-1 |
| chr5_4 | CDS | 7013646 | 7013874 | 7013646 | ID=Msa0833920-mRNA-1:cds;Parent=Msa0833920-mRNA-1 |
| chr5_4 | CDS | 7013097 | 7013563 | 7013097 | ID=Msa0833920-mRNA-1:cds;Parent=Msa0833920-mRNA-1 |
| Gene Sequence |
| Protein sequence |
