Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1388060 | XP_024640429.1 | 93.349 | 421 | 27 | 1 | 1 | 420 | 1 | 421 | 0.0 | 792 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1388060 | sp|Q9FLC2|MO3_ARATH | 35.248 | 383 | 229 | 7 | 44 | 412 | 7 | 384 | 1.23e-76 | 246 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1388060 | A0A396HMS3 | 93.349 | 421 | 27 | 1 | 1 | 420 | 1 | 421 | 0.0 | 792 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0833920 | Msa1388060 | 0.988981 | 3.369365e-176 | -8.615850e-47 |
| Msa0834150 | Msa1388060 | 0.998691 | 3.822736e-273 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1388060 | MtrunA17_Chr5g0399671 | 93.349 | 421 | 27 | 1 | 1 | 420 | 1 | 421 | 0.0 | 792 |
| Msa1388060 | MtrunA17_Chr5g0399661 | 87.621 | 412 | 45 | 4 | 1 | 412 | 3 | 408 | 0.0 | 727 |
| Msa1388060 | MtrunA17_Chr1g0211181 | 42.857 | 378 | 206 | 5 | 43 | 412 | 9 | 384 | 1.05e-97 | 298 |
| Msa1388060 | MtrunA17_Chr1g0211141 | 40.741 | 378 | 215 | 4 | 43 | 412 | 2 | 378 | 9.42e-85 | 264 |
| Msa1388060 | MtrunA17_Chr1g0211171 | 40.576 | 382 | 211 | 5 | 46 | 412 | 9 | 389 | 1.95e-82 | 259 |
| Msa1388060 | MtrunA17_Chr1g0197161 | 40.104 | 384 | 217 | 5 | 41 | 412 | 4 | 386 | 3.24e-82 | 258 |
| Msa1388060 | MtrunA17_Chr1g0211151 | 37.240 | 384 | 228 | 5 | 41 | 412 | 4 | 386 | 3.91e-70 | 227 |
| Msa1388060 | MtrunA17_Chr4g0018001 | 28.500 | 200 | 133 | 3 | 205 | 394 | 2 | 201 | 1.62e-23 | 98.6 |
| Msa1388060 | MtrunA17_Chr8g0375081 | 27.027 | 370 | 235 | 14 | 46 | 392 | 83 | 440 | 3.18e-23 | 102 |
| Msa1388060 | MtrunA17_Chr4g0017991 | 40.000 | 130 | 58 | 1 | 43 | 172 | 6 | 115 | 8.48e-23 | 95.1 |
| Msa1388060 | MtrunA17_Chr5g0402211 | 25.789 | 380 | 245 | 13 | 37 | 392 | 69 | 435 | 9.36e-23 | 100 |
| Msa1388060 | MtrunA17_Chr4g0017951 | 53.521 | 71 | 33 | 0 | 43 | 113 | 6 | 76 | 2.82e-20 | 84.7 |
| Msa1388060 | MtrunA17_Chr4g0010391 | 28.980 | 245 | 161 | 8 | 143 | 383 | 166 | 401 | 9.30e-20 | 91.3 |
| Msa1388060 | MtrunA17_Chr4g0017981 | 32.203 | 118 | 74 | 1 | 283 | 394 | 4 | 121 | 1.39e-12 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1388060 | AT2G35660.1 | 67.164 | 402 | 131 | 1 | 11 | 412 | 13 | 413 | 0.0 | 564 |
| Msa1388060 | AT2G29720.1 | 65.271 | 406 | 138 | 2 | 8 | 412 | 8 | 411 | 0.0 | 534 |
| Msa1388060 | AT2G35660.2 | 69.900 | 299 | 90 | 0 | 114 | 412 | 1 | 299 | 6.79e-160 | 453 |
| Msa1388060 | AT2G35660.3 | 69.900 | 299 | 90 | 0 | 114 | 412 | 1 | 299 | 6.79e-160 | 453 |
| Msa1388060 | AT5G05320.1 | 35.248 | 383 | 229 | 7 | 44 | 412 | 7 | 384 | 1.25e-77 | 246 |
| Msa1388060 | AT4G38540.1 | 35.156 | 384 | 227 | 6 | 46 | 415 | 9 | 384 | 1.19e-71 | 231 |
| Msa1388060 | AT4G15760.1 | 32.676 | 355 | 217 | 7 | 54 | 394 | 39 | 385 | 3.05e-51 | 178 |
| Msa1388060 | AT4G15760.2 | 32.231 | 363 | 220 | 7 | 54 | 394 | 39 | 397 | 6.14e-51 | 177 |
| Msa1388060 | AT4G15765.1 | 27.451 | 306 | 162 | 7 | 46 | 339 | 6 | 263 | 4.56e-25 | 103 |
| Msa1388060 | AT5G67030.1 | 26.301 | 346 | 221 | 12 | 35 | 360 | 72 | 403 | 3.35e-23 | 102 |
| Msa1388060 | AT5G67030.2 | 26.301 | 346 | 221 | 12 | 35 | 360 | 72 | 403 | 4.38e-23 | 102 |
| Msa1388060 | AT4G15765.2 | 26.994 | 163 | 108 | 3 | 183 | 339 | 33 | 190 | 2.52e-12 | 65.9 |
| Msa1388060 | AT4G15765.5 | 26.994 | 163 | 108 | 3 | 183 | 339 | 33 | 190 | 2.52e-12 | 65.9 |
| Msa1388060 | AT4G15765.3 | 26.994 | 163 | 108 | 3 | 183 | 339 | 33 | 190 | 2.52e-12 | 65.9 |
| Msa1388060 | AT4G15765.4 | 26.994 | 163 | 108 | 3 | 183 | 339 | 33 | 190 | 2.52e-12 | 65.9 |
Find 124 sgRNAs with CRISPR-Local
Find 229 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGAGCCTTGATTGTTAATT+TGG | 0.116957 | tig0021032:-88709 | None:intergenic |
| ATGTCTCAACAGATTGTAAT+AGG | 0.209668 | tig0021032:+90524 | Msa1388060:intron |
| GGATACCTTCTTGGAATTCT+TGG | 0.225203 | tig0021032:+90203 | Msa1388060:CDS |
| CAGGCTTGGTGTTCGGTCTT+TGG | 0.226551 | tig0021032:+89075 | Msa1388060:intron |
| ACCCACAAGGTTTGCCAGTA+TGG | 0.279042 | tig0021032:-91210 | None:intergenic |
| AGGTTTGCCAGTATGGTTAT+TGG | 0.287423 | tig0021032:-91203 | None:intergenic |
| TACACTTTGGTTGGAGAAAC+AGG | 0.298074 | tig0021032:-90710 | None:intergenic |
| CAAGCTCCTTGCCCAAGATT+TGG | 0.304518 | tig0021032:-91059 | None:intergenic |
| TGCCCAAGATTTGGAGTCAT+TGG | 0.325151 | tig0021032:-91050 | None:intergenic |
| TTGCCTTGTCGTACCAGAAT+TGG | 0.332839 | tig0021032:+88672 | Msa1388060:CDS |
| TCCAAATGGGGATACCTTCT+TGG | 0.343769 | tig0021032:+90194 | Msa1388060:CDS |
| AGTGGAGAGGAGGGTACTTT+TGG | 0.353165 | tig0021032:+90101 | Msa1388060:CDS |
| TGGTGTTCGGTCTTTGGTGC+TGG | 0.353894 | tig0021032:+89081 | Msa1388060:CDS |
| CCACAGGTGAATTACATCTA+TGG | 0.363265 | tig0021032:+90662 | Msa1388060:CDS |
| TCTCCACTGCACGCACCTCT+TGG | 0.364886 | tig0021032:-90086 | None:intergenic |
| ATATCGTAGGGATCCAATTC+TGG | 0.369127 | tig0021032:-88685 | None:intergenic |
| GTGAATTACATCTATGGAAA+AGG | 0.372345 | tig0021032:+90668 | Msa1388060:CDS |
| CATCCAATGACTCCAAATCT+TGG | 0.376057 | tig0021032:+91047 | Msa1388060:CDS |
| CTAAGGATCTAGTAGAAAAC+TGG | 0.383052 | tig0021032:+90886 | Msa1388060:CDS |
| CGATTACAACATGTTCCTTT+CGG | 0.387738 | tig0021032:-88743 | None:intergenic |
| TATAGTCTTGACTCCATTGA+TGG | 0.389182 | tig0021032:+90953 | Msa1388060:CDS |
| TCCAAGAAGGTATCCCCATT+TGG | 0.398453 | tig0021032:-90195 | None:intergenic |
| TGCTTTGAATTTCAAAGAAA+AGG | 0.412896 | tig0021032:+89358 | Msa1388060:CDS |
| TGGAGGGCACTTGATTCAAT+TGG | 0.413951 | tig0021032:+89160 | Msa1388060:CDS |
| ACCTTCTTGGAATTCTTGGA+TGG | 0.417941 | tig0021032:+90207 | Msa1388060:CDS |
| AAAAGGTTGTCCATCTGAAT+AGG | 0.421700 | tig0021032:-90636 | None:intergenic |
| TTTCTCCAACCAAAGTGTAT+TGG | 0.421909 | tig0021032:+90714 | Msa1388060:CDS |
| TCCATTATGTTTAGTAGCTC+CGG | 0.421971 | tig0021032:-90912 | None:intergenic |
| GAATTTCCAGGCTTGGTGTT+CGG | 0.422569 | tig0021032:+89068 | Msa1388060:intron |
| TCCGGAGCTACTAAACATAA+TGG | 0.432269 | tig0021032:+90911 | Msa1388060:CDS |
| CATTGATGGATCGATGGCTT+TGG | 0.441676 | tig0021032:+90967 | Msa1388060:CDS |
| ATGTTAGGAACAATATTGTC+AGG | 0.445129 | tig0021032:+91267 | Msa1388060:CDS |
| AAGATTGAACCAAGTCCAAA+TGG | 0.447760 | tig0021032:+90180 | Msa1388060:CDS |
| ACCATACTGGCAAACCTTGT+GGG | 0.451653 | tig0021032:+91209 | Msa1388060:CDS |
| ACTCAATATTTAGAAATTCA+AGG | 0.453429 | tig0021032:+89202 | Msa1388060:CDS |
| AGGAGCTTGTTGTGCTCTTG+AGG | 0.453532 | tig0021032:+91073 | Msa1388060:CDS |
| CATATTTCCAATAACCATAC+TGG | 0.459252 | tig0021032:+91196 | Msa1388060:CDS |
| CTTCTTTAGCACCGATGGCT+CGG | 0.460032 | tig0021032:-90859 | None:intergenic |
| ATCGTGGGTGGTGGCATAGC+AGG | 0.462878 | tig0021032:+88762 | Msa1388060:CDS |
| TTGTTAATTTGGAATATCGT+AGG | 0.467403 | tig0021032:-88698 | None:intergenic |
| ACCGATGGCTCGGTTGTTTG+AGG | 0.467547 | tig0021032:-90849 | None:intergenic |
| ATCTTCAATAGTTCATCTGC+AGG | 0.468683 | tig0021032:+90743 | Msa1388060:CDS |
| CAACTGCTCTATCCCTTCAC+AGG | 0.470796 | tig0021032:+88790 | Msa1388060:CDS |
| GCACAATAACCAACGTACTT+TGG | 0.472989 | tig0021032:-90596 | None:intergenic |
| ATCCAATGACTCCAAATCTT+GGG | 0.473366 | tig0021032:+91048 | Msa1388060:CDS |
| ACAACTCTACCTCTAGAAAC+AGG | 0.473445 | tig0021032:-91005 | None:intergenic |
| AAGGTATCCCCATTTGGACT+TGG | 0.476269 | tig0021032:-90189 | None:intergenic |
| ATACCATTCAATATTCTTCA+CGG | 0.476649 | tig0021032:+90151 | Msa1388060:CDS |
| ACAAACCAATACACTTTGGT+TGG | 0.478803 | tig0021032:-90719 | None:intergenic |
| AGGTGCGTGCAGTGGAGAGG+AGG | 0.485424 | tig0021032:+90091 | Msa1388060:CDS |
| GCTTGCTTCTTTAGCACCGA+TGG | 0.486635 | tig0021032:-90864 | None:intergenic |
| AGATTGAACCAAGTCCAAAT+GGG | 0.490772 | tig0021032:+90181 | Msa1388060:CDS |
| GAAGAATATTGAATGGTATC+CGG | 0.493585 | tig0021032:-90147 | None:intergenic |
| TGTCTCAACAGATTGTAATA+GGG | 0.495956 | tig0021032:+90525 | Msa1388060:intron |
| CCTTCTTGGAATTCTTGGAT+GGG | 0.498261 | tig0021032:+90208 | Msa1388060:CDS |
| TGTTAATTTGGAATATCGTA+GGG | 0.498991 | tig0021032:-88697 | None:intergenic |
| TGAATTACATCTATGGAAAA+GGG | 0.502725 | tig0021032:+90669 | Msa1388060:CDS |
| ACCCGCTGGTGTGTTATGTT+AGG | 0.502830 | tig0021032:+91252 | Msa1388060:CDS |
| CTCAATATTTAGAAATTCAA+GGG | 0.504248 | tig0021032:+89203 | Msa1388060:CDS |
| CAGTCAGAGTCACTTAGAAC+TGG | 0.505114 | tig0021032:+89106 | Msa1388060:CDS |
| CATTCAATATTCTTCACGGT+TGG | 0.508130 | tig0021032:+90155 | Msa1388060:CDS |
| GTCAAGACTATAGTGTCATC+CGG | 0.508571 | tig0021032:-90942 | None:intergenic |
| TAATTCACCTGTGGTTGAAA+AGG | 0.521016 | tig0021032:-90653 | None:intergenic |
| GAAACAGGTGGATTTATCAA+TGG | 0.522659 | tig0021032:-90990 | None:intergenic |
| CGGAGGTAGTTGTCCATCCA+AGG | 0.524864 | tig0021032:-90127 | None:intergenic |
| GATCATATGGCAATGAAAGA+TGG | 0.528214 | tig0021032:+91168 | Msa1388060:CDS |
| GATGACAAACCAATACACTT+TGG | 0.530182 | tig0021032:-90723 | None:intergenic |
| TCCTAACATAACACACCAGC+GGG | 0.532706 | tig0021032:-91253 | None:intergenic |
| AGAGGTAGAGTTGTACTCGT+TGG | 0.533800 | tig0021032:+91014 | Msa1388060:CDS |
| ATATTCCAAATTAACAATCA+AGG | 0.535648 | tig0021032:+88704 | Msa1388060:CDS |
| TGTGGGTTCGATTTCGCAGT+GGG | 0.537467 | tig0021032:+91226 | Msa1388060:CDS |
| TGACTCCATTGATGGATCGA+TGG | 0.537732 | tig0021032:+90961 | Msa1388060:CDS |
| TTGTGCTCTTGAGGATGCAG+TGG | 0.539243 | tig0021032:+91082 | Msa1388060:CDS |
| TCCTCAAACAACCGAGCCAT+CGG | 0.543389 | tig0021032:+90848 | Msa1388060:CDS |
| CAACCGTGAAGAATATTGAA+TGG | 0.545947 | tig0021032:-90154 | None:intergenic |
| AACCATACTGGCAAACCTTG+TGG | 0.548839 | tig0021032:+91208 | Msa1388060:CDS |
| AAGAGGTGCGTGCAGTGGAG+AGG | 0.550530 | tig0021032:+90088 | Msa1388060:CDS |
| CTTGGATGGACAACTACCTC+CGG | 0.550873 | tig0021032:+90128 | Msa1388060:CDS |
| CAAAGCCATCGATCCATCAA+TGG | 0.553794 | tig0021032:-90966 | None:intergenic |
| TTGTACTCGTTGGAGACGCT+TGG | 0.555295 | tig0021032:+91024 | Msa1388060:CDS |
| CAGCCAAGAGGTGCGTGCAG+TGG | 0.558479 | tig0021032:+90083 | Msa1388060:intron |
| GTTGGTTATTGTGCTTTCCG+TGG | 0.559926 | tig0021032:+90605 | Msa1388060:CDS |
| TATGGAAAAGGGTTACGTGC+AGG | 0.561657 | tig0021032:+90680 | Msa1388060:CDS |
| TCTAGTAGAAAACTGGCCTC+CGG | 0.564302 | tig0021032:+90893 | Msa1388060:CDS |
| TGGGTCTAAAATACTTGCAA+AGG | 0.566510 | tig0021032:+90227 | Msa1388060:CDS |
| TTCGATCGCCGATAGCTAAG+TGG | 0.571348 | tig0021032:+90558 | Msa1388060:CDS |
| GTACGACAAGGCAATGATGT+AGG | 0.573750 | tig0021032:-88663 | None:intergenic |
| AATCCCATCCACTTAGCTAT+CGG | 0.574558 | tig0021032:-90566 | None:intergenic |
| GGACTTGCCTCCTATTCAGA+TGG | 0.575892 | tig0021032:+90626 | Msa1388060:CDS |
| CCATAGATGTAATTCACCTG+TGG | 0.586219 | tig0021032:-90662 | None:intergenic |
| AAAGGAACATGTTGTAATCG+TGG | 0.586526 | tig0021032:+88746 | Msa1388060:CDS |
| AAGGAACATGTTGTAATCGT+GGG | 0.588781 | tig0021032:+88747 | Msa1388060:CDS |
| ATCGCCGATAGCTAAGTGGA+TGG | 0.589305 | tig0021032:+90562 | Msa1388060:CDS |
| GGTGCGTGCAGTGGAGAGGA+GGG | 0.589579 | tig0021032:+90092 | Msa1388060:CDS |
| CCCATCCAAGAATTCCAAGA+AGG | 0.591085 | tig0021032:-90208 | None:intergenic |
| ATGACTCCAAATCTTGGGCA+AGG | 0.595031 | tig0021032:+91053 | Msa1388060:CDS |
| TCAGAGTCACTTAGAACTGG+TGG | 0.596903 | tig0021032:+89109 | Msa1388060:CDS |
| AGGTTGTCCATCTGAATAGG+AGG | 0.597237 | tig0021032:-90633 | None:intergenic |
| ATAAATCCACCTGTTTCTAG+AGG | 0.600625 | tig0021032:+90996 | Msa1388060:CDS |
| CATGTTGTAATCGTGGGTGG+TGG | 0.604156 | tig0021032:+88753 | Msa1388060:CDS |
| ACTAGAGTTGAAACCTGTGA+AGG | 0.613474 | tig0021032:-88803 | None:intergenic |
| TCAATCTTCTGATGTCCGAA+AGG | 0.615839 | tig0021032:+88728 | Msa1388060:CDS |
| CAGATTGTAATAGGGTGCGA+CGG | 0.616990 | tig0021032:+90533 | Msa1388060:intron |
| TTGTGGGTTCGATTTCGCAG+TGG | 0.617057 | tig0021032:+91225 | Msa1388060:CDS |
| CTAGAGTTGAAACCTGTGAA+GGG | 0.619680 | tig0021032:-88802 | None:intergenic |
| TGTTAGGAACAATATTGTCA+GGG | 0.626479 | tig0021032:+91268 | Msa1388060:CDS |
| TCGCCGATAGCTAAGTGGAT+GGG | 0.626839 | tig0021032:+90563 | Msa1388060:CDS |
| GGTGCTAAAGAAGCAAGCTA+AGG | 0.629803 | tig0021032:+90869 | Msa1388060:CDS |
| AAACATAATGGATTCTACGC+CGG | 0.635624 | tig0021032:+90923 | Msa1388060:CDS |
| GATTGAACCAAGTCCAAATG+GGG | 0.644561 | tig0021032:+90182 | Msa1388060:CDS |
| ATTTCAAAGAAAAGGACGAA+AGG | 0.644711 | tig0021032:+89366 | Msa1388060:CDS |
| ATTATGTTTAGTAGCTCCGG+AGG | 0.647657 | tig0021032:-90909 | None:intergenic |
| CTGAATAGGAGGCAAGTCCA+CGG | 0.650582 | tig0021032:-90622 | None:intergenic |
| ATATTGTCAGGGACAGAGCG+AGG | 0.652754 | tig0021032:+91279 | Msa1388060:CDS |
| TGGGCTATTGTGCAGCCAAG+AGG | 0.656706 | tig0021032:+90071 | Msa1388060:intron |
| ATTGTGTTGAAATCTGAGGA+TGG | 0.657886 | tig0021032:+89323 | Msa1388060:CDS |
| ACTCTACCTCTAGAAACAGG+TGG | 0.665384 | tig0021032:-91002 | None:intergenic |
| GAAGGGATAGAGCAGTTGCA+AGG | 0.666482 | tig0021032:-88785 | None:intergenic |
| TTCCTAACATAACACACCAG+CGG | 0.671082 | tig0021032:-91254 | None:intergenic |
| CAGGATTGTGTTGAAATCTG+AGG | 0.674897 | tig0021032:+89319 | Msa1388060:intron |
| GAATATTGAATGGTATCCGG+AGG | 0.679865 | tig0021032:-90144 | None:intergenic |
| ACTGCGAAATCGAACCCACA+AGG | 0.681244 | tig0021032:-91223 | None:intergenic |
| GATCCAATTCTGGTACGACA+AGG | 0.683776 | tig0021032:-88675 | None:intergenic |
| GAACATGTTGTAATCGTGGG+TGG | 0.726429 | tig0021032:+88750 | Msa1388060:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAGATATTTATCATTAT+TGG | + | tig0021032:89461-89480 | Msa1388060:intron | 10.0% |
| !! | AATTATTTATGAAATGTATA+TGG | + | tig0021032:90051-90070 | Msa1388060:intron | 10.0% |
| !! | ATTATTTATGAAATGTATAT+GGG | + | tig0021032:90052-90071 | Msa1388060:intron | 10.0% |
| !!! | TTTACATTCACTTTTTTATT+AGG | - | tig0021032:89626-89645 | None:intergenic | 15.0% |
| !!! | ATATATTTGTCTTTTGTAAA+AGG | - | tig0021032:89738-89757 | None:intergenic | 15.0% |
| !! | AACTTAGTTGAAAAAATATT+TGG | + | tig0021032:90327-90346 | Msa1388060:intron | 15.0% |
| !! | GTAATTTAACTATATATGTA+TGG | - | tig0021032:90784-90803 | None:intergenic | 15.0% |
| !! | ATATTCCAAATTAACAATCA+AGG | + | tig0021032:88704-88723 | Msa1388060:CDS | 20.0% |
| !! | ACTCAATATTTAGAAATTCA+AGG | + | tig0021032:89202-89221 | Msa1388060:CDS | 20.0% |
| !! | CTCAATATTTAGAAATTCAA+GGG | + | tig0021032:89203-89222 | Msa1388060:CDS | 20.0% |
| !!! | CTAAATAATGTAGAGTTTTA+TGG | - | tig0021032:89506-89525 | None:intergenic | 20.0% |
| !! | AAATTCATTTCTAAATTGTG+GGG | - | tig0021032:89566-89585 | None:intergenic | 20.0% |
| !! | GAAATTCATTTCTAAATTGT+GGG | - | tig0021032:89567-89586 | None:intergenic | 20.0% |
| !! | TGAAATTCATTTCTAAATTG+TGG | - | tig0021032:89568-89587 | None:intergenic | 20.0% |
| !! | TTACAAAAGACAAATATATG+AGG | + | tig0021032:89739-89758 | Msa1388060:intron | 20.0% |
| !! | TACAAAAGACAAATATATGA+GGG | + | tig0021032:89740-89759 | Msa1388060:intron | 20.0% |
| !! | AGTTCGTAAAAAATTAATCA+CGG | - | tig0021032:90311-90330 | None:intergenic | 20.0% |
| !! | TGTTAATTTGGAATATCGTA+GGG | - | tig0021032:88700-88719 | None:intergenic | 25.0% |
| !! | TTGTTAATTTGGAATATCGT+AGG | - | tig0021032:88701-88720 | None:intergenic | 25.0% |
| !! | TGATTTTCTCAAACTATTAG+CGG | - | tig0021032:88890-88909 | None:intergenic | 25.0% |
| !! | TGCTTTGAATTTCAAAGAAA+AGG | + | tig0021032:89358-89377 | Msa1388060:CDS | 25.0% |
| !!! | TATCATTATTGGTTTTTGTC+CGG | + | tig0021032:89472-89491 | Msa1388060:intron | 25.0% |
| ! | AAAGAAAGACAAAAATCTGA+AGG | + | tig0021032:89657-89676 | Msa1388060:intron | 25.0% |
| ! | AATCATTTATAAACTATCCC+TGG | - | tig0021032:89938-89957 | None:intergenic | 25.0% |
| ! | TTTAGTCATTGATACATAGT+TGG | + | tig0021032:90026-90045 | Msa1388060:intron | 25.0% |
| ! | ATACCATTCAATATTCTTCA+CGG | + | tig0021032:90151-90170 | Msa1388060:CDS | 25.0% |
| !! | ATTGACTCATTGTGATTTAT+GGG | + | tig0021032:90256-90275 | Msa1388060:intron | 25.0% |
| ! | AAAGGATCTTACAAACATAA+TGG | + | tig0021032:90452-90471 | Msa1388060:intron | 25.0% |
| !!! | TCAATTTGTTAGCAGTTTTT+AGG | - | tig0021032:90500-90519 | None:intergenic | 25.0% |
| ! | TGAATTACATCTATGGAAAA+GGG | + | tig0021032:90669-90688 | Msa1388060:CDS | 25.0% |
| ! | TTTCATCTGAACAATAAACT+CGG | - | tig0021032:90806-90825 | None:intergenic | 25.0% |
| ! | TGAAAAATAGTTGAGTTCTA+TGG | + | tig0021032:90821-90840 | Msa1388060:intron | 25.0% |
| TTGAGCCTTGATTGTTAATT+TGG | - | tig0021032:88712-88731 | None:intergenic | 30.0% | |
| TGGTGATAAAGAATAGATTG+AGG | - | tig0021032:88830-88849 | None:intergenic | 30.0% | |
| ! | CCATCATTACTTTGATAACA+CGG | + | tig0021032:88847-88866 | Msa1388060:intron | 30.0% |
| GATATAAGAATTGTGCAACA+AGG | - | tig0021032:89264-89283 | None:intergenic | 30.0% | |
| GTTCATAAATTTGGCTATAC+AGG | + | tig0021032:89300-89319 | Msa1388060:intron | 30.0% | |
| ATTTCAAAGAAAAGGACGAA+AGG | + | tig0021032:89366-89385 | Msa1388060:CDS | 30.0% | |
| GAAATGAATTTCACATGAAG+TGG | + | tig0021032:89575-89594 | Msa1388060:intron | 30.0% | |
| !! | GAAGTATTGTGCTTTGTAAA+AGG | - | tig0021032:89980-89999 | None:intergenic | 30.0% |
| AGCACAATACTTCGAAAATT+TGG | + | tig0021032:89987-90006 | Msa1388060:intron | 30.0% | |
| AATACTTCGAAAATTTGGCT+TGG | + | tig0021032:89992-90011 | Msa1388060:intron | 30.0% | |
| ! | ATACTTCGAAAATTTGGCTT+GGG | + | tig0021032:89993-90012 | Msa1388060:intron | 30.0% |
| GAAGAATATTGAATGGTATC+CGG | - | tig0021032:90150-90169 | None:intergenic | 30.0% | |
| !! | CATTGACTCATTGTGATTTA+TGG | + | tig0021032:90255-90274 | Msa1388060:intron | 30.0% |
| TTGACTCATTGTGATTTATG+GGG | + | tig0021032:90257-90276 | Msa1388060:intron | 30.0% | |
| CTAAAAACATAGTGCACAAA+AGG | + | tig0021032:90434-90453 | Msa1388060:intron | 30.0% | |
| ATGTCTCAACAGATTGTAAT+AGG | + | tig0021032:90524-90543 | Msa1388060:intron | 30.0% | |
| TGTCTCAACAGATTGTAATA+GGG | + | tig0021032:90525-90544 | Msa1388060:intron | 30.0% | |
| GTGAATTACATCTATGGAAA+AGG | + | tig0021032:90668-90687 | Msa1388060:CDS | 30.0% | |
| CATATTTCCAATAACCATAC+TGG | + | tig0021032:91196-91215 | Msa1388060:CDS | 30.0% | |
| ATGTTAGGAACAATATTGTC+AGG | + | tig0021032:91267-91286 | Msa1388060:CDS | 30.0% | |
| TGTTAGGAACAATATTGTCA+GGG | + | tig0021032:91268-91287 | Msa1388060:CDS | 30.0% | |
| CGATTACAACATGTTCCTTT+CGG | - | tig0021032:88746-88765 | None:intergenic | 35.0% | |
| AAAGGAACATGTTGTAATCG+TGG | + | tig0021032:88746-88765 | Msa1388060:CDS | 35.0% | |
| AAGGAACATGTTGTAATCGT+GGG | + | tig0021032:88747-88766 | Msa1388060:CDS | 35.0% | |
| CCGTGTTATCAAAGTAATGA+TGG | - | tig0021032:88850-88869 | None:intergenic | 35.0% | |
| !! | GTTGAACTTGTTGAATTTCC+AGG | + | tig0021032:89056-89075 | Msa1388060:intron | 35.0% |
| ! | CTTGAGCTGGTTCATAAATT+TGG | + | tig0021032:89291-89310 | Msa1388060:intron | 35.0% |
| ATTGTGTTGAAATCTGAGGA+TGG | + | tig0021032:89323-89342 | Msa1388060:CDS | 35.0% | |
| AGGTATATAATTCTGCTGTG+TGG | + | tig0021032:89386-89405 | Msa1388060:intron | 35.0% | |
| TGGTTAGATCCATATGACAT+TGG | + | tig0021032:89595-89614 | Msa1388060:intron | 35.0% | |
| TAGGTGAAACCAATGTCATA+TGG | - | tig0021032:89607-89626 | None:intergenic | 35.0% | |
| !! | ATACCCTTTAGCCTTAACTA+GGG | + | tig0021032:89863-89882 | Msa1388060:intron | 35.0% |
| !!! | TGAGAGGTTTTTTAGTCTAC+TGG | - | tig0021032:89898-89917 | None:intergenic | 35.0% |
| !! | TTTGTAAAAGGCGTCTTCAT+AGG | - | tig0021032:89968-89987 | None:intergenic | 35.0% |
| CAACCGTGAAGAATATTGAA+TGG | - | tig0021032:90157-90176 | None:intergenic | 35.0% | |
| CATTCAATATTCTTCACGGT+TGG | + | tig0021032:90155-90174 | Msa1388060:CDS | 35.0% | |
| AAGATTGAACCAAGTCCAAA+TGG | + | tig0021032:90180-90199 | Msa1388060:CDS | 35.0% | |
| AGATTGAACCAAGTCCAAAT+GGG | + | tig0021032:90181-90200 | Msa1388060:CDS | 35.0% | |
| ! | TGGGTCTAAAATACTTGCAA+AGG | + | tig0021032:90227-90246 | Msa1388060:CDS | 35.0% |
| AAAAGGTTGTCCATCTGAAT+AGG | - | tig0021032:90639-90658 | None:intergenic | 35.0% | |
| TAATTCACCTGTGGTTGAAA+AGG | - | tig0021032:90656-90675 | None:intergenic | 35.0% | |
| TTTCTCCAACCAAAGTGTAT+TGG | + | tig0021032:90714-90733 | Msa1388060:CDS | 35.0% | |
| ACAAACCAATACACTTTGGT+TGG | - | tig0021032:90722-90741 | None:intergenic | 35.0% | |
| GATGACAAACCAATACACTT+TGG | - | tig0021032:90726-90745 | None:intergenic | 35.0% | |
| ATCTTCAATAGTTCATCTGC+AGG | + | tig0021032:90743-90762 | Msa1388060:CDS | 35.0% | |
| AAATAGTTGAGTTCTATGGC+AGG | + | tig0021032:90825-90844 | Msa1388060:intron | 35.0% | |
| CTAAGGATCTAGTAGAAAAC+TGG | + | tig0021032:90886-90905 | Msa1388060:CDS | 35.0% | |
| TCCATTATGTTTAGTAGCTC+CGG | - | tig0021032:90915-90934 | None:intergenic | 35.0% | |
| !! | AAACATAATGGATTCTACGC+CGG | + | tig0021032:90923-90942 | Msa1388060:CDS | 35.0% |
| ! | TATAGTCTTGACTCCATTGA+TGG | + | tig0021032:90953-90972 | Msa1388060:CDS | 35.0% |
| ! | GAAACAGGTGGATTTATCAA+TGG | - | tig0021032:90993-91012 | None:intergenic | 35.0% |
| !! | ATAAATCCACCTGTTTCTAG+AGG | + | tig0021032:90996-91015 | Msa1388060:CDS | 35.0% |
| ATCCAATGACTCCAAATCTT+GGG | + | tig0021032:91048-91067 | Msa1388060:CDS | 35.0% | |
| ! | GAAGACGCTTTTAGATCATA+TGG | + | tig0021032:91155-91174 | Msa1388060:CDS | 35.0% |
| GATCATATGGCAATGAAAGA+TGG | + | tig0021032:91168-91187 | Msa1388060:CDS | 35.0% | |
| ATATCGTAGGGATCCAATTC+TGG | - | tig0021032:88688-88707 | None:intergenic | 40.0% | |
| TCAATCTTCTGATGTCCGAA+AGG | + | tig0021032:88728-88747 | Msa1388060:CDS | 40.0% | |
| CTAGAGTTGAAACCTGTGAA+GGG | - | tig0021032:88805-88824 | None:intergenic | 40.0% | |
| ACTAGAGTTGAAACCTGTGA+AGG | - | tig0021032:88806-88825 | None:intergenic | 40.0% | |
| TCTCAAACTATTAGCGGTGT+CGG | - | tig0021032:88884-88903 | None:intergenic | 40.0% | |
| GTGTTATCAGCTATGAAGCA+CGG | - | tig0021032:89026-89045 | None:intergenic | 40.0% | |
| ! | ACTTGTTGAATTTCCAGGCT+TGG | + | tig0021032:89061-89080 | Msa1388060:intron | 40.0% |
| TCACTCACCCTTTCCAAAAA+TGG | + | tig0021032:89136-89155 | Msa1388060:CDS | 40.0% | |
| CACTCACCCTTTCCAAAAAT+GGG | + | tig0021032:89137-89156 | Msa1388060:CDS | 40.0% | |
| CAGGATTGTGTTGAAATCTG+AGG | + | tig0021032:89319-89338 | Msa1388060:intron | 40.0% | |
| AGAAACTGAGACTAAGTCGT+CGG | + | tig0021032:89524-89543 | Msa1388060:intron | 40.0% | |
| !!! | TGTCTTTTGTAAAAGGTGCC+CGG | - | tig0021032:89731-89750 | None:intergenic | 40.0% |
| ! | TGAGGGTTTTTACAACTCTG+TGG | + | tig0021032:89757-89776 | Msa1388060:intron | 40.0% |
| !! | CATACCCTTTAGCCTTAACT+AGG | + | tig0021032:89862-89881 | Msa1388060:intron | 40.0% |
| !! | TACCCTTTAGCCTTAACTAG+GGG | + | tig0021032:89864-89883 | Msa1388060:intron | 40.0% |
| CTTGATTCTCAAGCAATGAG+AGG | - | tig0021032:89914-89933 | None:intergenic | 40.0% | |
| CTCTCATTGCTTGAGAATCA+AGG | + | tig0021032:89912-89931 | Msa1388060:intron | 40.0% | |
| !! | TCGAAAATTTGGCTTGGGTT+CGG | + | tig0021032:89998-90017 | Msa1388060:intron | 40.0% |
| !! | GTACTTTTGGAAACCTTGGA+TGG | + | tig0021032:90114-90133 | Msa1388060:CDS | 40.0% |
| GAATATTGAATGGTATCCGG+AGG | - | tig0021032:90147-90166 | None:intergenic | 40.0% | |
| GATTGAACCAAGTCCAAATG+GGG | + | tig0021032:90182-90201 | Msa1388060:CDS | 40.0% | |
| GGATACCTTCTTGGAATTCT+TGG | + | tig0021032:90203-90222 | Msa1388060:CDS | 40.0% | |
| ACCTTCTTGGAATTCTTGGA+TGG | + | tig0021032:90207-90226 | Msa1388060:CDS | 40.0% | |
| CCTTCTTGGAATTCTTGGAT+GGG | + | tig0021032:90208-90227 | Msa1388060:CDS | 40.0% | |
| AAGCTAACCACATGCATGAT+TGG | + | tig0021032:90403-90422 | Msa1388060:intron | 40.0% | |
| GTCATAACCAATCATGCATG+TGG | - | tig0021032:90413-90432 | None:intergenic | 40.0% | |
| GACCAGAGCTTCATGATTAT+TGG | - | tig0021032:90478-90497 | None:intergenic | 40.0% | |
| AATCCCATCCACTTAGCTAT+CGG | - | tig0021032:90569-90588 | None:intergenic | 40.0% | |
| ! | TTTTCTGAGCCAAAGTACGT+TGG | + | tig0021032:90587-90606 | Msa1388060:CDS | 40.0% |
| GCACAATAACCAACGTACTT+TGG | - | tig0021032:90599-90618 | None:intergenic | 40.0% | |
| CCATAGATGTAATTCACCTG+TGG | - | tig0021032:90665-90684 | None:intergenic | 40.0% | |
| CCACAGGTGAATTACATCTA+TGG | + | tig0021032:90662-90681 | Msa1388060:CDS | 40.0% | |
| TACACTTTGGTTGGAGAAAC+AGG | - | tig0021032:90713-90732 | None:intergenic | 40.0% | |
| ATTATGTTTAGTAGCTCCGG+AGG | - | tig0021032:90912-90931 | None:intergenic | 40.0% | |
| TCCGGAGCTACTAAACATAA+TGG | + | tig0021032:90911-90930 | Msa1388060:CDS | 40.0% | |
| GTCAAGACTATAGTGTCATC+CGG | - | tig0021032:90945-90964 | None:intergenic | 40.0% | |
| ! | ACAACTCTACCTCTAGAAAC+AGG | - | tig0021032:91008-91027 | None:intergenic | 40.0% |
| CATCCAATGACTCCAAATCT+TGG | + | tig0021032:91047-91066 | Msa1388060:CDS | 40.0% | |
| AGGTTTGCCAGTATGGTTAT+TGG | - | tig0021032:91206-91225 | None:intergenic | 40.0% | |
| TTCCTAACATAACACACCAG+CGG | - | tig0021032:91257-91276 | None:intergenic | 40.0% | |
| GTACGACAAGGCAATGATGT+AGG | - | tig0021032:88666-88685 | None:intergenic | 45.0% | |
| TTGCCTTGTCGTACCAGAAT+TGG | + | tig0021032:88672-88691 | Msa1388060:CDS | 45.0% | |
| GATCCAATTCTGGTACGACA+AGG | - | tig0021032:88678-88697 | None:intergenic | 45.0% | |
| GAACATGTTGTAATCGTGGG+TGG | + | tig0021032:88750-88769 | Msa1388060:CDS | 45.0% | |
| TCCTCATATTAGCCGTGATC+CGG | - | tig0021032:88999-89018 | None:intergenic | 45.0% | |
| !! | GAATTTCCAGGCTTGGTGTT+CGG | + | tig0021032:89068-89087 | Msa1388060:intron | 45.0% |
| CAGTCAGAGTCACTTAGAAC+TGG | + | tig0021032:89106-89125 | Msa1388060:CDS | 45.0% | |
| TCAGAGTCACTTAGAACTGG+TGG | + | tig0021032:89109-89128 | Msa1388060:CDS | 45.0% | |
| TCACCCTTTCCAAAAATGGG+TGG | + | tig0021032:89140-89159 | Msa1388060:CDS | 45.0% | |
| !! | CCTCCACCCATTTTTGGAAA+GGG | - | tig0021032:89146-89165 | None:intergenic | 45.0% |
| CCTTTCCAAAAATGGGTGGA+GGG | + | tig0021032:89144-89163 | Msa1388060:CDS | 45.0% | |
| !! | TGGAGGGCACTTGATTCAAT+TGG | + | tig0021032:89160-89179 | Msa1388060:CDS | 45.0% |
| TATATCAGCTGAGCTTGAGC+TGG | + | tig0021032:89278-89297 | Msa1388060:intron | 45.0% | |
| !! | GAGTTTTATGGTGCACTGAC+CGG | - | tig0021032:89494-89513 | None:intergenic | 45.0% |
| GAAACTGAGACTAAGTCGTC+GGG | + | tig0021032:89525-89544 | Msa1388060:intron | 45.0% | |
| ACTCACACTCTTCAACTACC+CGG | + | tig0021032:89709-89728 | Msa1388060:intron | 45.0% | |
| !!! | GTCTTTTGTAAAAGGTGCCC+GGG | - | tig0021032:89730-89749 | None:intergenic | 45.0% |
| TGGACAAGACCTCGAAAATG+TGG | + | tig0021032:89777-89796 | Msa1388060:intron | 45.0% | |
| GAAACATTAGCACGCCACAT+AGG | + | tig0021032:89809-89828 | Msa1388060:intron | 45.0% | |
| GCATACATTCGACTCCTATG+TGG | - | tig0021032:89826-89845 | None:intergenic | 45.0% | |
| GAGTCGAATGTATGCCATGT+TGG | + | tig0021032:89831-89850 | Msa1388060:intron | 45.0% | |
| TCGAATGTATGCCATGTTGG+AGG | + | tig0021032:89834-89853 | Msa1388060:intron | 45.0% | |
| GGTATGTTAGACCTCCAACA+TGG | - | tig0021032:89848-89867 | None:intergenic | 45.0% | |
| AGCCCCTAGTTAAGGCTAAA+GGG | - | tig0021032:89869-89888 | None:intergenic | 45.0% | |
| TAGCCCCTAGTTAAGGCTAA+AGG | - | tig0021032:89870-89889 | None:intergenic | 45.0% | |
| ATTGCTTGAGAATCAAGGCC+AGG | + | tig0021032:89917-89936 | Msa1388060:intron | 45.0% | |
| TTGCTTGAGAATCAAGGCCA+GGG | + | tig0021032:89918-89937 | Msa1388060:intron | 45.0% | |
| ! | AAGGCGTCTTCATAGGTTGA+GGG | - | tig0021032:89961-89980 | None:intergenic | 45.0% |
| !! | AAAGGCGTCTTCATAGGTTG+AGG | - | tig0021032:89962-89981 | None:intergenic | 45.0% |
| !!! | GAGGGTACTTTTGGAAACCT+TGG | + | tig0021032:90110-90129 | Msa1388060:CDS | 45.0% |
| ! | AAGGTATCCCCATTTGGACT+TGG | - | tig0021032:90192-90211 | None:intergenic | 45.0% |
| TCCAAATGGGGATACCTTCT+TGG | + | tig0021032:90194-90213 | Msa1388060:CDS | 45.0% | |
| !! | TCCAAGAAGGTATCCCCATT+TGG | - | tig0021032:90198-90217 | None:intergenic | 45.0% |
| CCCATCCAAGAATTCCAAGA+AGG | - | tig0021032:90211-90230 | None:intergenic | 45.0% | |
| GGCCAATAATCATGAAGCTC+TGG | + | tig0021032:90473-90492 | Msa1388060:intron | 45.0% | |
| CAGATTGTAATAGGGTGCGA+CGG | + | tig0021032:90533-90552 | Msa1388060:intron | 45.0% | |
| GTTGGTTATTGTGCTTTCCG+TGG | + | tig0021032:90605-90624 | Msa1388060:CDS | 45.0% | |
| AGGTTGTCCATCTGAATAGG+AGG | - | tig0021032:90636-90655 | None:intergenic | 45.0% | |
| ! | TGGACAACCTTTTCAACCAC+AGG | + | tig0021032:90646-90665 | Msa1388060:CDS | 45.0% |
| TATGGAAAAGGGTTACGTGC+AGG | + | tig0021032:90680-90699 | Msa1388060:CDS | 45.0% | |
| GGTGCTAAAGAAGCAAGCTA+AGG | + | tig0021032:90869-90888 | Msa1388060:CDS | 45.0% | |
| ! | TCTAGTAGAAAACTGGCCTC+CGG | + | tig0021032:90893-90912 | Msa1388060:CDS | 45.0% |
| ! | TGACTCCATTGATGGATCGA+TGG | + | tig0021032:90961-90980 | Msa1388060:CDS | 45.0% |
| CAAAGCCATCGATCCATCAA+TGG | - | tig0021032:90969-90988 | None:intergenic | 45.0% | |
| ! | CATTGATGGATCGATGGCTT+TGG | + | tig0021032:90967-90986 | Msa1388060:CDS | 45.0% |
| ! | ACTCTACCTCTAGAAACAGG+TGG | - | tig0021032:91005-91024 | None:intergenic | 45.0% |
| AGAGGTAGAGTTGTACTCGT+TGG | + | tig0021032:91014-91033 | Msa1388060:CDS | 45.0% | |
| ! | TGCCCAAGATTTGGAGTCAT+TGG | - | tig0021032:91053-91072 | None:intergenic | 45.0% |
| ATGACTCCAAATCTTGGGCA+AGG | + | tig0021032:91053-91072 | Msa1388060:CDS | 45.0% | |
| AACCATACTGGCAAACCTTG+TGG | + | tig0021032:91208-91227 | Msa1388060:CDS | 45.0% | |
| ACCATACTGGCAAACCTTGT+GGG | + | tig0021032:91209-91228 | Msa1388060:CDS | 45.0% | |
| TCCTAACATAACACACCAGC+GGG | - | tig0021032:91256-91275 | None:intergenic | 45.0% | |
| CATGTTGTAATCGTGGGTGG+TGG | + | tig0021032:88753-88772 | Msa1388060:CDS | 50.0% | |
| GAAGGGATAGAGCAGTTGCA+AGG | - | tig0021032:88788-88807 | None:intergenic | 50.0% | |
| CAACTGCTCTATCCCTTCAC+AGG | + | tig0021032:88790-88809 | Msa1388060:CDS | 50.0% | |
| GTGTGTGTGTGTGTGTGTGT+TGG | + | tig0021032:88938-88957 | Msa1388060:intron | 50.0% | |
| ! | GTGTGTGTGTGTGTTGGTGT+TGG | + | tig0021032:88954-88973 | Msa1388060:intron | 50.0% |
| TATTAGCCGTGATCCGGTGT+CGG | - | tig0021032:88993-89012 | None:intergenic | 50.0% | |
| ACCGGATCACGGCTAATATG+AGG | + | tig0021032:88995-89014 | Msa1388060:intron | 50.0% | |
| CCCTTTCCAAAAATGGGTGG+AGG | + | tig0021032:89143-89162 | Msa1388060:CDS | 50.0% | |
| !! | CCCTCCACCCATTTTTGGAA+AGG | - | tig0021032:89147-89166 | None:intergenic | 50.0% |
| ! | AAGTGCCCTCCACCCATTTT+TGG | - | tig0021032:89152-89171 | None:intergenic | 50.0% |
| CTCACACTCTTCAACTACCC+GGG | + | tig0021032:89710-89729 | Msa1388060:intron | 50.0% | |
| ! | GAGCTCAAGCCACATTTTCG+AGG | - | tig0021032:89789-89808 | None:intergenic | 50.0% |
| GGAACAGTAGCCCCTAGTTA+AGG | - | tig0021032:89877-89896 | None:intergenic | 50.0% | |
| !!! | AGTGGAGAGGAGGGTACTTT+TGG | + | tig0021032:90101-90120 | Msa1388060:CDS | 50.0% |
| CTTGGATGGACAACTACCTC+CGG | + | tig0021032:90128-90147 | Msa1388060:CDS | 50.0% | |
| TTCGATCGCCGATAGCTAAG+TGG | + | tig0021032:90558-90577 | Msa1388060:CDS | 50.0% | |
| ATCGCCGATAGCTAAGTGGA+TGG | + | tig0021032:90562-90581 | Msa1388060:CDS | 50.0% | |
| TCGCCGATAGCTAAGTGGAT+GGG | + | tig0021032:90563-90582 | Msa1388060:CDS | 50.0% | |
| CTGAATAGGAGGCAAGTCCA+CGG | - | tig0021032:90625-90644 | None:intergenic | 50.0% | |
| GGACTTGCCTCCTATTCAGA+TGG | + | tig0021032:90626-90645 | Msa1388060:CDS | 50.0% | |
| TCCTCAAACAACCGAGCCAT+CGG | + | tig0021032:90848-90867 | Msa1388060:CDS | 50.0% | |
| !! | CTTCTTTAGCACCGATGGCT+CGG | - | tig0021032:90862-90881 | None:intergenic | 50.0% |
| ! | GCTTGCTTCTTTAGCACCGA+TGG | - | tig0021032:90867-90886 | None:intergenic | 50.0% |
| TTGTACTCGTTGGAGACGCT+TGG | + | tig0021032:91024-91043 | Msa1388060:CDS | 50.0% | |
| CAAGCTCCTTGCCCAAGATT+TGG | - | tig0021032:91062-91081 | None:intergenic | 50.0% | |
| !! | AGGAGCTTGTTGTGCTCTTG+AGG | + | tig0021032:91073-91092 | Msa1388060:CDS | 50.0% |
| TTGTGCTCTTGAGGATGCAG+TGG | + | tig0021032:91082-91101 | Msa1388060:CDS | 50.0% | |
| ACCCACAAGGTTTGCCAGTA+TGG | - | tig0021032:91213-91232 | None:intergenic | 50.0% | |
| ACTGCGAAATCGAACCCACA+AGG | - | tig0021032:91226-91245 | None:intergenic | 50.0% | |
| TTGTGGGTTCGATTTCGCAG+TGG | + | tig0021032:91225-91244 | Msa1388060:CDS | 50.0% | |
| TGTGGGTTCGATTTCGCAGT+GGG | + | tig0021032:91226-91245 | Msa1388060:CDS | 50.0% | |
| ACCCGCTGGTGTGTTATGTT+AGG | + | tig0021032:91252-91271 | Msa1388060:CDS | 50.0% | |
| ATATTGTCAGGGACAGAGCG+AGG | + | tig0021032:91279-91298 | Msa1388060:CDS | 50.0% | |
| CAAAGACCGAACACCAAGCC+TGG | - | tig0021032:89077-89096 | None:intergenic | 55.0% | |
| !! | CAGGCTTGGTGTTCGGTCTT+TGG | + | tig0021032:89075-89094 | Msa1388060:intron | 55.0% |
| ! | TGGTGTTCGGTCTTTGGTGC+TGG | + | tig0021032:89081-89100 | Msa1388060:CDS | 55.0% |
| ACTGAGACTAAGTCGTCGGG+TGG | + | tig0021032:89528-89547 | Msa1388060:intron | 55.0% | |
| TGGGCTATTGTGCAGCCAAG+AGG | + | tig0021032:90071-90090 | Msa1388060:intron | 55.0% | |
| CGGAGGTAGTTGTCCATCCA+AGG | - | tig0021032:90130-90149 | None:intergenic | 55.0% | |
| !! | ACCGATGGCTCGGTTGTTTG+AGG | - | tig0021032:90852-90871 | None:intergenic | 55.0% |
| ! | ATCGTGGGTGGTGGCATAGC+AGG | + | tig0021032:88762-88781 | Msa1388060:CDS | 60.0% |
| CCACGATACGTGTCCGACAC+CGG | + | tig0021032:88977-88996 | Msa1388060:intron | 60.0% | |
| ACGTGTCCGACACCGGATCA+CGG | + | tig0021032:88984-89003 | Msa1388060:intron | 60.0% | |
| TCTCCACTGCACGCACCTCT+TGG | - | tig0021032:90089-90108 | None:intergenic | 60.0% | |
| ! | AAGAGGTGCGTGCAGTGGAG+AGG | + | tig0021032:90088-90107 | Msa1388060:CDS | 60.0% |
| ! | CCGGTGTCGGACACGTATCG+TGG | - | tig0021032:88980-88999 | None:intergenic | 65.0% |
| ! | CAGCCAAGAGGTGCGTGCAG+TGG | + | tig0021032:90083-90102 | Msa1388060:intron | 65.0% |
| AGGTGCGTGCAGTGGAGAGG+AGG | + | tig0021032:90091-90110 | Msa1388060:CDS | 65.0% | |
| GGTGCGTGCAGTGGAGAGGA+GGG | + | tig0021032:90092-90111 | Msa1388060:CDS | 65.0% | |
| TTCGCAGTGGGACAACCCGC+TGG | + | tig0021032:91238-91257 | Msa1388060:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0021032 | gene | 88621 | 91313 | 88621 | ID=Msa1388060;Name=Msa1388060 |
| tig0021032 | mRNA | 88621 | 91313 | 88621 | ID=Msa1388060-mRNA-1;Parent=Msa1388060;Name=Msa1388060-mRNA-1;_AED=0.34;_eAED=0.34;_QI=0|0.2|0.16|1|1|1|6|0|420 |
| tig0021032 | exon | 88621 | 88811 | 88621 | ID=Msa1388060-mRNA-1:exon:10934;Parent=Msa1388060-mRNA-1 |
| tig0021032 | exon | 89078 | 89224 | 89078 | ID=Msa1388060-mRNA-1:exon:10935;Parent=Msa1388060-mRNA-1 |
| tig0021032 | exon | 89322 | 89387 | 89322 | ID=Msa1388060-mRNA-1:exon:10936;Parent=Msa1388060-mRNA-1 |
| tig0021032 | exon | 90086 | 90248 | 90086 | ID=Msa1388060-mRNA-1:exon:10937;Parent=Msa1388060-mRNA-1 |
| tig0021032 | exon | 90536 | 90764 | 90536 | ID=Msa1388060-mRNA-1:exon:10938;Parent=Msa1388060-mRNA-1 |
| tig0021032 | exon | 90847 | 91313 | 90847 | ID=Msa1388060-mRNA-1:exon:10939;Parent=Msa1388060-mRNA-1 |
| tig0021032 | CDS | 88621 | 88811 | 88621 | ID=Msa1388060-mRNA-1:cds;Parent=Msa1388060-mRNA-1 |
| tig0021032 | CDS | 89078 | 89224 | 89078 | ID=Msa1388060-mRNA-1:cds;Parent=Msa1388060-mRNA-1 |
| tig0021032 | CDS | 89322 | 89387 | 89322 | ID=Msa1388060-mRNA-1:cds;Parent=Msa1388060-mRNA-1 |
| tig0021032 | CDS | 90086 | 90248 | 90086 | ID=Msa1388060-mRNA-1:cds;Parent=Msa1388060-mRNA-1 |
| tig0021032 | CDS | 90536 | 90764 | 90536 | ID=Msa1388060-mRNA-1:cds;Parent=Msa1388060-mRNA-1 |
| tig0021032 | CDS | 90847 | 91313 | 90847 | ID=Msa1388060-mRNA-1:cds;Parent=Msa1388060-mRNA-1 |
| Gene Sequence |
| Protein sequence |
