AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0834350

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0834350 MtrunA17_Chr5g0399831 98.272 984 17 0 1 984 1 984 0.0 1998
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0834350 AT5G41150.1 66.230 992 291 9 1 984 1 956 0.0 1283
Msa0834350 AT5G41150.3 65.439 923 275 9 1 915 1 887 0.0 1160
Msa0834350 AT5G41150.2 61.740 724 233 10 1 716 1 688 0.0 825
Msa0834350 AT5G41150.4 61.740 724 233 10 1 716 1 688 0.0 825

Find 246 sgRNAs with CRISPR-Local

Find 448 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGTCCTCAGGCGATGGTTTC+TGG 0.039215 5_4:-7366214 Msa0834350:CDS
CAGTCGGGATTTGGTGGTTT+TGG 0.087312 5_4:+7366476 None:intergenic
TTTGAGATGGAAATTGATTT+TGG 0.169113 5_4:+7366510 None:intergenic
CACCGGATGTGGTGGATATT+AGG 0.180382 5_4:-7366090 Msa0834350:CDS
GGATAAGAGCTTCTCATTTC+AGG 0.182092 5_4:-7362016 Msa0834350:intron
TTCCTTTCCACGCAAATTAA+TGG 0.186365 5_4:+7362147 None:intergenic
TGTATTCTGTCCAAGGGATA+TGG 0.222718 5_4:+7363341 None:intergenic
GGTGACTTACTTGAAATATT+TGG 0.224245 5_4:-7365226 Msa0834350:CDS
CCAAAGGATCCTAAGGGTTT+TGG 0.230872 5_4:-7363384 Msa0834350:CDS
ACATTTATGGCCGAGATTTC+AGG 0.231804 5_4:-7366143 Msa0834350:CDS
GATCCAATTTGGCATACTTT+AGG 0.235008 5_4:-7365905 Msa0834350:CDS
TTCCCTAAAGTATGCCAAAT+TGG 0.239779 5_4:+7365902 None:intergenic
GTGTTACAGATTCTAATTAT+AGG 0.253075 5_4:-7360871 Msa0834350:CDS
GGTTACGGAAGTTACATTTA+TGG 0.258472 5_4:-7366156 Msa0834350:CDS
CAACTTTGATATAATGCTAT+TGG 0.284544 5_4:+7361563 None:intergenic
CGTGGAAAGGAAAAGTATTC+AGG 0.296025 5_4:-7362136 Msa0834350:CDS
TGGAAAAGGCAAGAGAAAAT+TGG 0.303152 5_4:-7363190 Msa0834350:CDS
GAATCCCTCTAAAAGGTTAA+AGG 0.308417 5_4:-7362803 Msa0834350:CDS
TATCAGAGTGGGCATGGTTT+AGG 0.314337 5_4:-7362464 Msa0834350:intron
TAGCATCTAGAAAGTCTCTA+AGG 0.318207 5_4:+7360753 None:intergenic
AGATACCCCTCAGTCTGATT+TGG 0.321552 5_4:-7363226 Msa0834350:CDS
GAGAGGACGATGAAGTGTTT+AGG 0.322791 5_4:-7366178 Msa0834350:CDS
ATCCAATTTGGCATACTTTA+GGG 0.326230 5_4:-7365904 Msa0834350:CDS
CGGTGATTTCAGTCGGGATT+TGG 0.329036 5_4:+7366467 None:intergenic
TACCAGTCTGCCAGTGATAT+TGG 0.329348 5_4:-7361600 Msa0834350:intron
AGAAAAGCTAGCTGAAATAA+TGG 0.331086 5_4:-7360798 Msa0834350:CDS
TCCAAATATTCTTCATCAAA+AGG 0.334364 5_4:-7362220 Msa0834350:CDS
ACCGGATGTGGTGGATATTA+GGG 0.338897 5_4:-7366089 Msa0834350:CDS
AAGCTGAGAATCCCTCTAAA+AGG 0.342926 5_4:-7362810 Msa0834350:CDS
CCAAAACCCTTAGGATCCTT+TGG 0.343817 5_4:+7363384 None:intergenic
AGAGGACGATGAAGTGTTTA+GGG 0.345932 5_4:-7366177 Msa0834350:CDS
GCAGGAGCATGATGCACTTC+TGG 0.348700 5_4:-7363298 Msa0834350:CDS
TGTTACAGATTCTAATTATA+GGG 0.349584 5_4:-7360870 Msa0834350:CDS
AACTTTGATATAATGCTATT+GGG 0.350549 5_4:+7361564 None:intergenic
AAAAGCTTCGGTGGAAGTTT+CGG 0.357591 5_4:+7366294 None:intergenic
AGAGATGAGGAAGACGAATA+AGG 0.361182 5_4:-7365999 Msa0834350:CDS
CTGCATCAATATATCATCAT+TGG 0.362339 5_4:-7360640 Msa0834350:three_prime_UTR
TAGTATTTAAATCTGAATCT+AGG 0.363787 5_4:+7362429 None:intergenic
TGAAAGTGATCAGCCTATAC+TGG 0.367474 5_4:-7362905 Msa0834350:CDS
GTAAAACAAACCTGGTCAAT+TGG 0.376126 5_4:+7362667 None:intergenic
GGAAAAGGCAAGAGAAAATT+GGG 0.376193 5_4:-7363189 Msa0834350:CDS
GAAAGCGATTGTTGAAGTTA+TGG 0.378027 5_4:-7366035 Msa0834350:CDS
GAAGTGGCAAGTGGTAAAAC+TGG 0.379166 5_4:-7363108 Msa0834350:CDS
TTCTAATTATAGGGCCATAA+TGG 0.379915 5_4:-7360861 Msa0834350:CDS
CCATCTCTTGCCATGGCATC+AGG 0.379982 5_4:+7362961 None:intergenic
AGACAATTCATTTGTCGAAA+TGG 0.381307 5_4:-7360702 Msa0834350:three_prime_UTR
GAACCATTGATGAATAATAA+TGG 0.385614 5_4:+7366701 None:intergenic
GGAGACAGTTGGATCCAATT+TGG 0.389564 5_4:-7365916 Msa0834350:CDS
AATGGATGGGTGTAAAAGTT+TGG 0.391473 5_4:-7360843 Msa0834350:CDS
TGAAATATTTGCTTCACTAA+AGG 0.402091 5_4:-7361475 Msa0834350:CDS
CCACGCAAATTAATGGTGAT+AGG 0.403076 5_4:+7362154 None:intergenic
CGATGAAGTGTTTAGGGTTA+CGG 0.407072 5_4:-7366171 Msa0834350:CDS
GAGAGAGTGACGGTGGTTAA+CGG 0.411126 5_4:+7366435 None:intergenic
GAGTTTCTAAGACGACTTCC+TGG 0.412129 5_4:-7360893 Msa0834350:CDS
GGTGGACATGTTCGTGGAAA+AGG 0.414905 5_4:-7363204 Msa0834350:CDS
AGAAAATTGGGGAATAGAAA+TGG 0.415060 5_4:-7363177 Msa0834350:CDS
GAAAAGCTAGCTGAAATAAT+GGG 0.415675 5_4:-7360797 Msa0834350:CDS
GATACCCCTCAGTCTGATTT+GGG 0.419551 5_4:-7363225 Msa0834350:CDS
TAAGACGTTGAGGAAGTTGT+TGG 0.419685 5_4:-7365852 Msa0834350:CDS
ATTTCAGGTTTATGTGAGTC+AGG 0.422071 5_4:-7366128 Msa0834350:CDS
GAGGATTTGACGGTGGAGAA+TGG 0.423362 5_4:-7365968 Msa0834350:CDS
CATCCATTATTATTCATCAA+TGG 0.429516 5_4:-7366704 Msa0834350:exon
GGTTCCGATGACGAAGTATA+TGG 0.431073 5_4:-7366068 Msa0834350:CDS
CTTGGACAGAATACAGAAAC+TGG 0.434228 5_4:-7363333 Msa0834350:CDS
TAGTGTTCAGAGTAACAATA+AGG 0.435873 5_4:-7363133 Msa0834350:CDS
AATTCTTACAATAAAAGCTT+CGG 0.439814 5_4:+7366282 None:intergenic
TCTCTTACAAAGGTCATGTC+TGG 0.440456 5_4:+7362847 None:intergenic
CCAAATATTCTTCATCAAAA+GGG 0.444882 5_4:-7362219 Msa0834350:CDS
GTATAGGCTGATCACTTTCA+AGG 0.445016 5_4:+7362908 None:intergenic
TTGGATTTGAGAGTGGGAGA+AGG 0.445667 5_4:+7366529 None:intergenic
CATAGTATTGGAAGAAGTCT+TGG 0.450907 5_4:-7364781 Msa0834350:CDS
TTCCCCGGCTACGTATAATC+TGG 0.457803 5_4:-7361521 Msa0834350:CDS
TTGGAATTGAAAATTCTTGA+AGG 0.459000 5_4:+7366781 None:intergenic
CTAGAGCCATCAATAATGAT+TGG 0.459040 5_4:+7363153 None:intergenic
CACCATTAATTTGCGTGGAA+AGG 0.459042 5_4:-7362149 Msa0834350:CDS
TTCTGATCGTCCTCAGGCGA+TGG 0.459265 5_4:-7366221 Msa0834350:CDS
AGGATTTGACGGTGGAGAAT+GGG 0.460766 5_4:-7365967 Msa0834350:CDS
TGCATCAATATATCATCATT+GGG 0.460824 5_4:-7360639 Msa0834350:three_prime_UTR
AGTTGTTGGATTATCTAGTC+AGG 0.461734 5_4:-7365838 Msa0834350:intron
AATGGCCCAATCATTATTGA+TGG 0.462309 5_4:-7363159 Msa0834350:CDS
GGATATTCTTGAAGAGGTAG+AGG 0.463581 5_4:-7364502 Msa0834350:CDS
GGACTCACAATTCTCTCATC+AGG 0.464055 5_4:-7366628 Msa0834350:CDS
TACTATGCCATGATTTGAAC+TGG 0.464434 5_4:+7364797 None:intergenic
TTCAAATCATGGCATAGTAT+TGG 0.467334 5_4:-7364793 Msa0834350:CDS
GTATTCTGTCCAAGGGATAT+GGG 0.469017 5_4:+7363342 None:intergenic
CTTCTCCACTCTTCTTCACA+AGG 0.470225 5_4:-7366571 Msa0834350:CDS
GACTTCGATTTCTCTTACAA+AGG 0.470567 5_4:+7362837 None:intergenic
AAAGAAGCCAAAGGATCCTA+AGG 0.472095 5_4:-7363391 Msa0834350:CDS
TCCACAATTCCTTCTTCTGA+CGG 0.475046 5_4:+7361405 None:intergenic
GCTGTTTATCAGAGTGGGCA+TGG 0.475784 5_4:-7362470 Msa0834350:intron
GGATATAGTCACCAACTTCA+AGG 0.475904 5_4:+7362175 None:intergenic
CAGTTTCTGTATTCTGTCCA+AGG 0.478718 5_4:+7363334 None:intergenic
CACCAATACAATGCCATTGT+CGG 0.479002 5_4:+7364422 None:intergenic
TGAAGGTCATTCAAGATGAA+TGG 0.479387 5_4:-7363464 Msa0834350:intron
AGAGGTTGATAAAGAAATGC+AGG 0.480477 5_4:-7362369 Msa0834350:intron
TGCATTGAGGATTAATATAC+CGG 0.483156 5_4:+7366327 None:intergenic
GCAAGTATACGTAGAGAGAA+TGG 0.483469 5_4:-7362733 Msa0834350:CDS
ACCCTAATATCCACCACATC+CGG 0.483836 5_4:+7366088 None:intergenic
CCACAATTCCTTCTTCTGAC+GGG 0.485112 5_4:+7361406 None:intergenic
ATGTGAGTCAGGAGCTTGAA+AGG 0.485830 5_4:-7366117 Msa0834350:CDS
CTCCCTACCTCAACAATCTC+CGG 0.486509 5_4:-7366346 Msa0834350:CDS
CGGAAATTGAATGTGCATTG+AGG 0.491952 5_4:+7366314 None:intergenic
CTCTTCCAGAGTTTCACATC+AGG 0.496021 5_4:-7362111 Msa0834350:CDS
CACCGACAATGGCATTGTAT+TGG 0.499306 5_4:-7364424 Msa0834350:CDS
AATTATAGGGCCATAATGGA+TGG 0.499805 5_4:-7360857 Msa0834350:CDS
CTGTAGACGATGCAGTTCTT+CGG 0.500641 5_4:-7362996 Msa0834350:CDS
CTCACATAAACCTGAAATCT+CGG 0.502105 5_4:+7366133 None:intergenic
CGACAATGGCATTGTATTGG+TGG 0.503087 5_4:-7364421 Msa0834350:CDS
TTAAGAATCCCAAAACCCTT+AGG 0.504091 5_4:+7363375 None:intergenic
CCTGATGCCATGGCAAGAGA+TGG 0.505249 5_4:-7362961 Msa0834350:CDS
AGACCAGATTATACGTAGCC+GGG 0.510695 5_4:+7361518 None:intergenic
GAGTAACAATAAGGAGGAAG+TGG 0.511062 5_4:-7363124 Msa0834350:CDS
GGTTGATGTGGAGGATTTGA+CGG 0.512007 5_4:-7365978 Msa0834350:CDS
TGAAAGGGATCCACCGGATG+TGG 0.516823 5_4:-7366101 Msa0834350:CDS
AGGTCGGCGGTGATTTCAGT+CGG 0.517477 5_4:+7366460 None:intergenic
TAGAGCCATCAATAATGATT+GGG 0.519009 5_4:+7363154 None:intergenic
AACTGGCGGCATCAATAAGC+AGG 0.520303 5_4:-7363316 Msa0834350:CDS
GTGGGTGTCCCGTCAGAAGA+AGG 0.521697 5_4:-7361414 Msa0834350:CDS
AGTATTTAAATCTGAATCTA+GGG 0.523014 5_4:+7362430 None:intergenic
AGAGTGGAGAAGAAGAAGAG+AGG 0.523516 5_4:+7366582 None:intergenic
GACGAATAAGGTTGATGTGG+AGG 0.525666 5_4:-7365987 Msa0834350:CDS
GGAGTCACTCCCATATCCCT+TGG 0.526144 5_4:-7363351 Msa0834350:CDS
TCACCAACTTCAAGGGTCAC+TGG 0.527041 5_4:+7362183 None:intergenic
TATCATCTTGTGAGGTCAGA+TGG 0.528309 5_4:-7365114 Msa0834350:CDS
TATTCTTGAAGAGGTAGAGG+AGG 0.530461 5_4:-7364499 Msa0834350:CDS
TCAGGTCATTGTGGACATGC+GGG 0.534537 5_4:-7362259 Msa0834350:intron
AACTCAATAACCAGAAAAGC+AGG 0.535534 5_4:-7362401 Msa0834350:CDS
TGTGAGTCAGGAGCTTGAAA+GGG 0.539494 5_4:-7366116 Msa0834350:CDS
ACACGTAAGACCTTCCACTT+TGG 0.540143 5_4:+7364750 None:intergenic
GATTTGGGTGGACATGTTCG+TGG 0.540278 5_4:-7363210 Msa0834350:CDS
GCCTCAACCAGTTCAAATCA+TGG 0.540311 5_4:-7364804 Msa0834350:CDS
CCTATCACCATTAATTTGCG+TGG 0.542199 5_4:-7362154 Msa0834350:CDS
TACCGGAGATTGTTGAGGTA+GGG 0.544284 5_4:+7366344 None:intergenic
GGTAGAGGAGGAAAGACGAA+AGG 0.544326 5_4:-7364487 Msa0834350:CDS
TGAAACAAAAGCAATGAGAG+TGG 0.545369 5_4:-7361433 Msa0834350:CDS
TGGCTTCCCATCTCTTGCCA+TGG 0.545402 5_4:+7362954 None:intergenic
GGCTTTAATATGTCCAGTAT+AGG 0.545948 5_4:+7362892 None:intergenic
TGATTTCAGTCGGGATTTGG+TGG 0.546327 5_4:+7366470 None:intergenic
ATTCCAGTGACCCTTGAAGT+TGG 0.548185 5_4:-7362186 Msa0834350:CDS
TGCAACATTTCAGGTCATTG+TGG 0.552950 5_4:-7362268 Msa0834350:intron
AGATCAACGATGAGGATTCG+AGG 0.554305 5_4:+7366382 None:intergenic
TTTGATGAAGAATATTTGGA+AGG 0.555720 5_4:+7362223 None:intergenic
ACCGGGCCATTGTTTCCACC+TGG 0.558185 5_4:+7362076 None:intergenic
GATAATGAAGACACTGAAGA+AGG 0.559010 5_4:-7365033 Msa0834350:intron
CTGATGCCATGGCAAGAGAT+GGG 0.559494 5_4:-7362960 Msa0834350:CDS
TTCAGGTCATTGTGGACATG+CGG 0.559800 5_4:-7362260 Msa0834350:intron
AGTGATGAAACAAACGTGGC+CGG 0.560188 5_4:+7366405 None:intergenic
GTTCTGTGATTATGTGTTCG+TGG 0.560393 5_4:+7366671 None:intergenic
CGTCACTCTCTCTATTCCTC+CGG 0.561209 5_4:-7366424 Msa0834350:CDS
TCTTACAATAAAAGCTTCGG+TGG 0.561222 5_4:+7366285 None:intergenic
CACATCATCACCAATATCAC+TGG 0.561268 5_4:+7361590 None:intergenic
AAAAGCAGGTGGGAGAAAAG+AGG 0.563035 5_4:-7362387 Msa0834350:CDS
GAGGAGGAAAGACGAAAGGA+AGG 0.565647 5_4:-7364483 Msa0834350:CDS
AAATTACAACACATCGGCTG+TGG 0.565719 5_4:-7360915 Msa0834350:CDS
GACGACCTGATGTGAAACTC+TGG 0.566044 5_4:+7362106 None:intergenic
GAGACCAGATTATACGTAGC+CGG 0.566434 5_4:+7361517 None:intergenic
GGCCCGGTATTATAAAATAC+CGG 0.566778 5_4:-7362061 Msa0834350:CDS
GGTCGGCGGTGATTTCAGTC+GGG 0.568350 5_4:+7366461 None:intergenic
TATAGGCTGATCACTTTCAA+GGG 0.569642 5_4:+7362909 None:intergenic
GATATAGTCACCAACTTCAA+GGG 0.570342 5_4:+7362176 None:intergenic
AGAGAAGAAGTGTTGGCTGA+AGG 0.570892 5_4:-7364453 Msa0834350:CDS
GATGATGATTCCAATTGACC+AGG 0.572392 5_4:-7362677 Msa0834350:intron
GGAGCTTGAAAGGGATCCAC+CGG 0.572541 5_4:-7366107 Msa0834350:CDS
TTCTGTTTGGATATTTGCAG+AGG 0.573410 5_4:-7365175 Msa0834350:CDS
GCATACCTTTCCTGATGCCA+TGG 0.573742 5_4:-7362971 Msa0834350:CDS
TACCGAGGTTCAGAAGTTTG+AGG 0.573827 5_4:-7362755 Msa0834350:CDS
ATACCGGAGATTGTTGAGGT+AGG 0.576613 5_4:+7366343 None:intergenic
GCCATGATTTGAACTGGTTG+AGG 0.578463 5_4:+7364803 None:intergenic
TTACAAAGGTCATGTCTGGA+TGG 0.580235 5_4:+7362851 None:intergenic
ACTATAGGATATTCTTGAAG+AGG 0.580708 5_4:-7364508 Msa0834350:intron
GTGGTTAACGGCGAGGTCGG+CGG 0.582058 5_4:+7366447 None:intergenic
TGGTGGCATGTAAAGATGAA+AGG 0.582112 5_4:-7364404 Msa0834350:CDS
ATGGTAAACGACAATTATAG+AGG 0.582858 5_4:+7362870 None:intergenic
TCTTGCCATGGCATCAGGAA+AGG 0.583375 5_4:+7362966 None:intergenic
ACGGTGGTTAACGGCGAGGT+CGG 0.584337 5_4:+7366444 None:intergenic
CCGATGACGAAGTATATGGT+GGG 0.586824 5_4:-7366064 Msa0834350:CDS
GGAAGAAGCACCAAAGTGGA+AGG 0.587130 5_4:-7364760 Msa0834350:CDS
GTCCACCCAAATCAGACTGA+GGG 0.588033 5_4:+7363220 None:intergenic
AGCATCTAGAAAGTCTCTAA+GGG 0.590263 5_4:+7360754 None:intergenic
GAAGACGAATAAGGTTGATG+TGG 0.590987 5_4:-7365990 Msa0834350:CDS
AGCACTAGTTTCACCCATGT+GGG 0.591717 5_4:+7363062 None:intergenic
TTGCTTGCCTCACAACAAAG+TGG 0.595258 5_4:+7360724 None:intergenic
TGCTTGCCTCACAACAAAGT+GGG 0.596550 5_4:+7360725 None:intergenic
AGTTTCTGTATTCTGTCCAA+GGG 0.598717 5_4:+7363335 None:intergenic
GTGTGCCTTGTGAAGAAGAG+TGG 0.600486 5_4:+7366566 None:intergenic
TGAGATTGTGAGGAGACAGT+TGG 0.601412 5_4:-7365927 Msa0834350:CDS
TAATATACCGGAGATTGTTG+AGG 0.602651 5_4:+7366339 None:intergenic
AAGGGATCCACCGGATGTGG+TGG 0.603412 5_4:-7366098 Msa0834350:CDS
CAGCACTAGTTTCACCCATG+TGG 0.605173 5_4:+7363061 None:intergenic
AAATATCCCACTTTGTTGTG+AGG 0.605641 5_4:-7360731 Msa0834350:exon
TCCGATGACGAAGTATATGG+TGG 0.605903 5_4:-7366065 Msa0834350:CDS
CCCACCATATACTTCGTCAT+CGG 0.606972 5_4:+7366064 None:intergenic
TTTCTGATCTTAAGACGTTG+AGG 0.607391 5_4:-7365862 Msa0834350:CDS
AGTCGTTTGATGAGATTGTG+AGG 0.607565 5_4:-7365937 Msa0834350:CDS
ACCAGGTGGAAACAATGGCC+CGG 0.608400 5_4:-7362077 Msa0834350:CDS
ATTATAGGGCCATAATGGAT+GGG 0.608748 5_4:-7360856 Msa0834350:CDS
ACGCATCGCGATTAAACGAA+CGG 0.614460 5_4:+7366257 None:intergenic
GAAAACTCAATCAAGAGCAC+CGG 0.619468 5_4:+7362042 None:intergenic
TTTGGATACACTCAGAGTGT+CGG 0.621133 5_4:-7365208 Msa0834350:CDS
GAAACAAAAGCAATGAGAGT+GGG 0.625806 5_4:-7361432 Msa0834350:CDS
ATACAACCAGGTGGAAACAA+TGG 0.625836 5_4:-7362082 Msa0834350:CDS
AACGTGTTTATCATCTTGTG+AGG 0.628573 5_4:-7365122 Msa0834350:CDS
CGATGACGAAGTATATGGTG+GGG 0.628683 5_4:-7366063 Msa0834350:CDS
TGCCTCAAACTTCTGAACCT+CGG 0.633949 5_4:+7362753 None:intergenic
TGGTAAACGACAATTATAGA+GGG 0.634773 5_4:+7362871 None:intergenic
ACCCCTCAGTCTGATTTGGG+TGG 0.635198 5_4:-7363222 Msa0834350:CDS
TCTTGGAAGAAGCACCAAAG+TGG 0.638664 5_4:-7364764 Msa0834350:CDS
AAGAAGCCAAAGGATCCTAA+GGG 0.640306 5_4:-7363390 Msa0834350:CDS
CATGTTGAGAGAAGAAGTGT+TGG 0.640935 5_4:-7364460 Msa0834350:CDS
TGTTCAGAGTAACAATAAGG+AGG 0.640959 5_4:-7363130 Msa0834350:CDS
CTAATATCCACCACATCCGG+TGG 0.646959 5_4:+7366091 None:intergenic
ATCAGGTCGTCTATACAACC+AGG 0.647266 5_4:-7362094 Msa0834350:CDS
AAGTGGCAAGTGGTAAAACT+GGG 0.647794 5_4:-7363107 Msa0834350:CDS
CGGAGGAATAGAGAGAGTGA+CGG 0.653257 5_4:+7366425 None:intergenic
TTGTTAAAAGATCAACGATG+AGG 0.653406 5_4:+7366374 None:intergenic
GACCAGATTATACGTAGCCG+GGG 0.655756 5_4:+7361519 None:intergenic
TAGACGATGCAGTTCTTCGG+AGG 0.657142 5_4:-7362993 Msa0834350:CDS
TGATGTGGAGGATTTGACGG+TGG 0.658243 5_4:-7365975 Msa0834350:CDS
AATAAGGAGGAAGTGGCAAG+TGG 0.663909 5_4:-7363117 Msa0834350:CDS
TAATTAGAATCTGTAACACC+AGG 0.663930 5_4:+7360875 None:intergenic
TCAATAACCAGAAAAGCAGG+TGG 0.667123 5_4:-7362398 Msa0834350:CDS
GAGTTTGTGAAACCAAACAC+GGG 0.667217 5_4:-7363026 Msa0834350:CDS
TTTCTATGAAGATTCTACCG+AGG 0.670018 5_4:-7362770 Msa0834350:CDS
GAAGGTGAAGACACCGACAA+TGG 0.670311 5_4:-7364435 Msa0834350:CDS
AAACCAGAAACCATCGCCTG+AGG 0.670896 5_4:+7366211 None:intergenic
GGCTGAAAATTACAACACAT+CGG 0.677724 5_4:-7360921 Msa0834350:CDS
AGAGTTTGTGAAACCAAACA+CGG 0.679375 5_4:-7363027 Msa0834350:CDS
CAATAACCAGAAAAGCAGGT+GGG 0.683805 5_4:-7362397 Msa0834350:CDS
AAGCTAGCTGAAATAATGGG+TGG 0.684063 5_4:-7360794 Msa0834350:CDS
GATGAAACAAACGTGGCCGG+AGG 0.685510 5_4:+7366408 None:intergenic
TGTCCACCCAAATCAGACTG+AGG 0.686132 5_4:+7363219 None:intergenic
ATGCATGTTTGAAAGAGATG+AGG 0.694727 5_4:-7366012 Msa0834350:CDS
CCCGTCAGAAGAAGGAATTG+TGG 0.696840 5_4:-7361406 Msa0834350:CDS
AGGAATAGAGAGAGTGACGG+TGG 0.698504 5_4:+7366428 None:intergenic
TCCACCCAAATCAGACTGAG+GGG 0.701752 5_4:+7363221 None:intergenic
GAACTTCTAGAAGACAACAA+TGG 0.710472 5_4:-7366652 Msa0834350:CDS
AGTGACGGTGGTTAACGGCG+AGG 0.717877 5_4:+7366440 None:intergenic
CTTCTAGAAGACAACAATGG+CGG 0.720413 5_4:-7366649 Msa0834350:CDS
GAATTGTGGAAAGTGACGTG+AGG 0.720586 5_4:-7361392 Msa0834350:intron
GAAAAGGCAAGAGAAAATTG+GGG 0.723707 5_4:-7363188 Msa0834350:CDS
GGACAGAATACAGAAACTGG+CGG 0.724595 5_4:-7363330 Msa0834350:CDS
AGGTCGTCTATACAACCAGG+TGG 0.725762 5_4:-7362091 Msa0834350:CDS
AGTTTGTGAAACCAAACACG+GGG 0.728405 5_4:-7363025 Msa0834350:CDS
GAGGAGTGATGAAACAAACG+TGG 0.753230 5_4:+7366401 None:intergenic
TTTGTGAAACCAAACACGGG+GGG 0.756170 5_4:-7363023 Msa0834350:CDS
GTTTGTGAAACCAAACACGG+GGG 0.775210 5_4:-7363024 Msa0834350:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGCATTTAAAAAAATAAAAG+AGG - chr5_4:7362472-7362491 Msa0834350:intron 15.0%
!!! TAGTTTAATTTGATAAATGT+TGG - chr5_4:7362834-7362853 Msa0834350:CDS 15.0%
!! TTATGTCTTCTTATAAAATA+AGG - chr5_4:7363073-7363092 Msa0834350:CDS 15.0%
!!! TCTTTGAAATATTATAAATC+TGG - chr5_4:7363248-7363267 Msa0834350:CDS 15.0%
!!! CTTTGAAATATTATAAATCT+GGG - chr5_4:7363249-7363268 Msa0834350:CDS 15.0%
!!! TTTGAAATATTATAAATCTG+GGG - chr5_4:7363250-7363269 Msa0834350:CDS 15.0%
!!! TTCTTAGTTTTATATTTCTA+AGG - chr5_4:7366040-7366059 Msa0834350:CDS 15.0%
!! AATTCTTACAATAAAAGCTT+CGG + chr5_4:7361119-7361138 None:intergenic 20.0%
!!! TGAATTAGCTTATTGAAAAA+TGG - chr5_4:7362002-7362021 Msa0834350:intron 20.0%
!! CTAACTAAAAAATACATGTT+TGG + chr5_4:7362055-7362074 None:intergenic 20.0%
!! GTCAAAAACAAAAAGAAAAA+AGG - chr5_4:7362335-7362354 Msa0834350:intron 20.0%
!!! AAAAAATAAAAGAGGCATAA+AGG - chr5_4:7362480-7362499 Msa0834350:intron 20.0%
!!! TATCATCGTTTTATTTGATT+TGG - chr5_4:7362707-7362726 Msa0834350:CDS 20.0%
!!! TTGATAAATGTTGGATATTT+TGG - chr5_4:7362843-7362862 Msa0834350:CDS 20.0%
!!! TGATAAATGTTGGATATTTT+GGG - chr5_4:7362844-7362863 Msa0834350:CDS 20.0%
!!! TAAAAAAAGACAACCTTTTT+TGG + chr5_4:7363056-7363075 None:intergenic 20.0%
!!! CTCTAATTTTATGAAATTTG+TGG - chr5_4:7363489-7363508 Msa0834350:intron 20.0%
!!! TACTTTTTTTGTGATTATGA+TGG - chr5_4:7363808-7363827 Msa0834350:intron 20.0%
!!! CTATTGTTTTTTTATTGTGA+AGG - chr5_4:7363917-7363936 Msa0834350:intron 20.0%
!! AATCAAAAAGAAAAACATGA+GGG + chr5_4:7364768-7364787 None:intergenic 20.0%
!! AGTATTTAAATCTGAATCTA+GGG + chr5_4:7364971-7364990 None:intergenic 20.0%
!! TAGTATTTAAATCTGAATCT+AGG + chr5_4:7364972-7364991 None:intergenic 20.0%
!! CAAATTAGTACTAAATATCT+GGG - chr5_4:7365546-7365565 Msa0834350:intron 20.0%
!! AACTTTGATATAATGCTATT+GGG + chr5_4:7365837-7365856 None:intergenic 20.0%
!! TGTTACAGATTCTAATTATA+GGG - chr5_4:7366528-7366547 Msa0834350:CDS 20.0%
! TTGGAATTGAAAATTCTTGA+AGG + chr5_4:7360620-7360639 None:intergenic 25.0%
! TGTTACCAGTAGAAAAATTT+AGG + chr5_4:7360644-7360663 None:intergenic 25.0%
! CATCCATTATTATTCATCAA+TGG - chr5_4:7360694-7360713 Msa0834350:three_prime_UTR 25.0%
! GAACCATTGATGAATAATAA+TGG + chr5_4:7360700-7360719 None:intergenic 25.0%
!!! TTTGAGATGGAAATTGATTT+TGG + chr5_4:7360891-7360910 None:intergenic 25.0%
! TTTCTTCAATTAAGAGAACA+AGG - chr5_4:7361926-7361945 Msa0834350:intron 25.0%
! TTCTTCAATTAAGAGAACAA+GGG - chr5_4:7361927-7361946 Msa0834350:intron 25.0%
! GAGAAAAATCATAAGCTATA+AGG - chr5_4:7361961-7361980 Msa0834350:intron 25.0%
! AACAAAAAGAAAAAAGGCAA+AGG - chr5_4:7362341-7362360 Msa0834350:intron 25.0%
! ACAAAAAGAAAAAAGGCAAA+GGG - chr5_4:7362342-7362361 Msa0834350:intron 25.0%
!! ACTTATCGTTATGTTTTCTT+TGG - chr5_4:7362393-7362412 Msa0834350:CDS 25.0%
! AAGCATGCAAAACAAAATTA+AGG + chr5_4:7362554-7362573 None:intergenic 25.0%
!! TTCGTTTGGATTTTCAAAAT+AGG - chr5_4:7362785-7362804 Msa0834350:CDS 25.0%
! TGATTTGATCATATCACTAT+AGG - chr5_4:7362875-7362894 Msa0834350:CDS 25.0%
! TCAAAGTGGAAATAACATAT+TGG - chr5_4:7363453-7363472 Msa0834350:CDS 25.0%
!! ACTCATTCGTTCAATTTTAT+TGG - chr5_4:7363594-7363613 Msa0834350:intron 25.0%
!! TATACCTTTAACCTTTTAGA+GGG + chr5_4:7364602-7364621 None:intergenic 25.0%
! GAATCAAAAAGAAAAACATG+AGG + chr5_4:7364769-7364788 None:intergenic 25.0%
!!! CATGTTTTTCTTTTTGATTC+TGG - chr5_4:7364769-7364788 Msa0834350:CDS 25.0%
! TGTAAGATGAAAGTTAGTAT+AGG + chr5_4:7364873-7364892 None:intergenic 25.0%
! TTTGATGAAGAATATTTGGA+AGG + chr5_4:7365178-7365197 None:intergenic 25.0%
! TCCAAATATTCTTCATCAAA+AGG - chr5_4:7365178-7365197 Msa0834350:CDS 25.0%
! CCAAATATTCTTCATCAAAA+GGG - chr5_4:7365179-7365198 Msa0834350:CDS 25.0%
! CCAGATATTTAGTACTAATT+TGG + chr5_4:7365548-7365567 None:intergenic 25.0%
! CCAAATTAGTACTAAATATC+TGG - chr5_4:7365545-7365564 Msa0834350:intron 25.0%
! CAACTTTGATATAATGCTAT+TGG + chr5_4:7365838-7365857 None:intergenic 25.0%
! TGAAATATTTGCTTCACTAA+AGG - chr5_4:7365923-7365942 Msa0834350:CDS 25.0%
! ATTGTAATTGCAAGAAACAT+TGG - chr5_4:7366120-7366139 Msa0834350:CDS 25.0%
!!! TGCAGGCTTTATATAATTTT+AGG - chr5_4:7366246-7366265 Msa0834350:CDS 25.0%
!! TCTGTTCCTAATGTAAATTT+TGG - chr5_4:7366434-7366453 Msa0834350:CDS 25.0%
!! CTGTTCCTAATGTAAATTTT+GGG - chr5_4:7366435-7366454 Msa0834350:CDS 25.0%
!! TGTTCCTAATGTAAATTTTG+GGG - chr5_4:7366436-7366455 Msa0834350:CDS 25.0%
! TTAACCCCAAAATTTACATT+AGG + chr5_4:7366443-7366462 None:intergenic 25.0%
! GTGTTACAGATTCTAATTAT+AGG - chr5_4:7366527-7366546 Msa0834350:CDS 25.0%
! TGCATCAATATATCATCATT+GGG - chr5_4:7366759-7366778 Msa0834350:intron 25.0%
! CCAGTAGAAAAATTTAGGTT+TGG + chr5_4:7360639-7360658 None:intergenic 30.0%
! CCAAACCTAAATTTTTCTAC+TGG - chr5_4:7360636-7360655 Msa0834350:three_prime_UTR 30.0%
! TTGATTTTGGATTTGAGAGT+GGG + chr5_4:7360878-7360897 None:intergenic 30.0%
!! ATTGATTTTGGATTTGAGAG+TGG + chr5_4:7360879-7360898 None:intergenic 30.0%
TTGTTAAAAGATCAACGATG+AGG + chr5_4:7361027-7361046 None:intergenic 30.0%
TGCATTGAGGATTAATATAC+CGG + chr5_4:7361074-7361093 None:intergenic 30.0%
ATCCAATTTGGCATACTTTA+GGG - chr5_4:7361494-7361513 Msa0834350:CDS 30.0%
!!! CTTATCGATGTTTTAACTTG+CGG - chr5_4:7361627-7361646 Msa0834350:intron 30.0%
CTTTGTAGTTCTTTGTATTG+TGG - chr5_4:7361665-7361684 Msa0834350:intron 30.0%
TATAGAGAATTTCGTAGACT+AGG - chr5_4:7361721-7361740 Msa0834350:intron 30.0%
ATAGAGAATTTCGTAGACTA+GGG - chr5_4:7361722-7361741 Msa0834350:intron 30.0%
TGGTGAAAAATAACACATAG+CGG - chr5_4:7361752-7361771 Msa0834350:intron 30.0%
CTGATTGAATTTGTAGTGTT+TGG - chr5_4:7361832-7361851 Msa0834350:intron 30.0%
GTAGTGTTTGGTAAAATTAG+CGG - chr5_4:7361844-7361863 Msa0834350:intron 30.0%
! AAGATATCAGCTATTGATTG+CGG - chr5_4:7362085-7362104 Msa0834350:CDS 30.0%
TCAGTGCTCATGATAAAAAA+GGG + chr5_4:7362118-7362137 None:intergenic 30.0%
ATCAGTGCTCATGATAAAAA+AGG + chr5_4:7362119-7362138 None:intergenic 30.0%
!!! TTGTGTGGTTTTTTACTGAT+AGG - chr5_4:7362141-7362160 Msa0834350:CDS 30.0%
! TTTTACTGATAGGTATGATG+CGG - chr5_4:7362151-7362170 Msa0834350:CDS 30.0%
GGTGACTTACTTGAAATATT+TGG - chr5_4:7362172-7362191 Msa0834350:CDS 30.0%
CAAAAAGAAAAAAGGCAAAG+GGG - chr5_4:7362343-7362362 Msa0834350:intron 30.0%
! ATAAAAGAGGCATAAAGGAA+AGG - chr5_4:7362485-7362504 Msa0834350:intron 30.0%
TTCAAATCATGGCATAGTAT+TGG - chr5_4:7362605-7362624 Msa0834350:intron 30.0%
! TTCCTATTCTAGAAAGTCTA+TGG - chr5_4:7362682-7362701 Msa0834350:CDS 30.0%
!!! TAATGCTTTTCTAGTTCGTT+TGG - chr5_4:7362771-7362790 Msa0834350:CDS 30.0%
ACTATAGGATATTCTTGAAG+AGG - chr5_4:7362890-7362909 Msa0834350:CDS 30.0%
!! ACTGCACTGATTAAATAATC+CGG + chr5_4:7363117-7363136 None:intergenic 30.0%
!! AGAATTCGTTAGGATTAGTT+TGG + chr5_4:7363187-7363206 None:intergenic 30.0%
! TTTTCAGCATAGAATTCGTT+AGG + chr5_4:7363197-7363216 None:intergenic 30.0%
! GATGGCAATTTTGGATAATA+AGG - chr5_4:7363299-7363318 Msa0834350:CDS 30.0%
ATTTGTGGATACCTATAATC+TGG - chr5_4:7363504-7363523 Msa0834350:intron 30.0%
TTCTAGTAAAGCCAGATTAT+AGG + chr5_4:7363518-7363537 None:intergenic 30.0%
! TCAATTTTATTGGCAGTGAT+TGG - chr5_4:7363604-7363623 Msa0834350:intron 30.0%
AGAAAATTGGGGAATAGAAA+TGG - chr5_4:7364221-7364240 Msa0834350:intron 30.0%
TAGAGCCATCAATAATGATT+GGG + chr5_4:7364247-7364266 None:intergenic 30.0%
TAGTGTTCAGAGTAACAATA+AGG - chr5_4:7364265-7364284 Msa0834350:intron 30.0%
!!! GTGGGCTTTATTTTTTGAAT+CGG + chr5_4:7364321-7364340 None:intergenic 30.0%
TTCAAAAAATAAAGCCCACA+TGG - chr5_4:7364322-7364341 Msa0834350:intron 30.0%
TCAAAAAATAAAGCCCACAT+GGG - chr5_4:7364323-7364342 Msa0834350:intron 30.0%
TGGTAAACGACAATTATAGA+GGG + chr5_4:7364530-7364549 None:intergenic 30.0%
ATGGTAAACGACAATTATAG+AGG + chr5_4:7364531-7364550 None:intergenic 30.0%
! GTATACCTTTAACCTTTTAG+AGG + chr5_4:7364603-7364622 None:intergenic 30.0%
CAACTATAGTAAAACAAACC+TGG + chr5_4:7364742-7364761 None:intergenic 30.0%
! TTGTTTTCCTCTTTTCTGAT+TGG - chr5_4:7364893-7364912 Msa0834350:intron 30.0%
!!! TTTTCTGGTTATTGAGTTCT+GGG + chr5_4:7364995-7365014 None:intergenic 30.0%
! TTGCCATGGATTTTATAGTT+TGG - chr5_4:7365103-7365122 Msa0834350:CDS 30.0%
! TGCCATGGATTTTATAGTTT+GGG - chr5_4:7365104-7365123 Msa0834350:CDS 30.0%
TTCCCAAACTATAAAATCCA+TGG + chr5_4:7365109-7365128 None:intergenic 30.0%
! CCCTTTTGATGAAGAATATT+TGG + chr5_4:7365182-7365201 None:intergenic 30.0%
! TACTGTCTTGTTACTATCAA+TGG - chr5_4:7365440-7365459 Msa0834350:intron 30.0%
AATTTGGACCAAAACAGTAA+CGG + chr5_4:7365532-7365551 None:intergenic 30.0%
CAAACAAGCTATATCATACA+TGG - chr5_4:7365697-7365716 Msa0834350:intron 30.0%
!!! CTTGATTAGCATTTGTTTTG+TGG - chr5_4:7365739-7365758 Msa0834350:intron 30.0%
!! CAACAAATATTGATTTGTGC+AGG - chr5_4:7366229-7366248 Msa0834350:CDS 30.0%
GAAATATTCTTGTTGAGACA+TGG + chr5_4:7366296-7366315 None:intergenic 30.0%
TAATTAGAATCTGTAACACC+AGG + chr5_4:7366526-7366545 None:intergenic 30.0%
TTCTAATTATAGGGCCATAA+TGG - chr5_4:7366537-7366556 Msa0834350:CDS 30.0%
AGAAAAGCTAGCTGAAATAA+TGG - chr5_4:7366600-7366619 Msa0834350:CDS 30.0%
GAAAAGCTAGCTGAAATAAT+GGG - chr5_4:7366601-7366620 Msa0834350:CDS 30.0%
AGACAATTCATTTGTCGAAA+TGG - chr5_4:7366696-7366715 Msa0834350:exon 30.0%
CTGCATCAATATATCATCAT+TGG - chr5_4:7366758-7366777 Msa0834350:intron 30.0%
! GAACTTCTAGAAGACAACAA+TGG - chr5_4:7360746-7360765 Msa0834350:CDS 35.0%
!! AGAGGAGATGAGTTTTGATA+AGG + chr5_4:7360801-7360820 None:intergenic 35.0%
TAATATACCGGAGATTGTTG+AGG + chr5_4:7361062-7361081 None:intergenic 35.0%
TCTTACAATAAAAGCTTCGG+TGG + chr5_4:7361116-7361135 None:intergenic 35.0%
GGTTACGGAAGTTACATTTA+TGG - chr5_4:7361242-7361261 Msa0834350:intron 35.0%
CTCACATAAACCTGAAATCT+CGG + chr5_4:7361268-7361287 None:intergenic 35.0%
!! ATTTCAGGTTTATGTGAGTC+AGG - chr5_4:7361270-7361289 Msa0834350:intron 35.0%
GAAAGCGATTGTTGAAGTTA+TGG - chr5_4:7361363-7361382 Msa0834350:intron 35.0%
ATGCATGTTTGAAAGAGATG+AGG - chr5_4:7361386-7361405 Msa0834350:intron 35.0%
GATCCAATTTGGCATACTTT+AGG - chr5_4:7361493-7361512 Msa0834350:CDS 35.0%
TTCCCTAAAGTATGCCAAAT+TGG + chr5_4:7361499-7361518 None:intergenic 35.0%
TTTCTGATCTTAAGACGTTG+AGG - chr5_4:7361536-7361555 Msa0834350:CDS 35.0%
AGTTGTTGGATTATCTAGTC+AGG - chr5_4:7361560-7361579 Msa0834350:CDS 35.0%
CTTTGTATTGTGGAGAATCA+CGG - chr5_4:7361675-7361694 Msa0834350:intron 35.0%
TTATGGCAGATAGCTTATAG+CGG - chr5_4:7361800-7361819 Msa0834350:intron 35.0%
ATAAGCTCGTGAGAAAATGA+CGG - chr5_4:7362026-7362045 Msa0834350:CDS 35.0%
TTCTGTTTGGATATTTGCAG+AGG - chr5_4:7362223-7362242 Msa0834350:CDS 35.0%
AACGTGTTTATCATCTTGTG+AGG - chr5_4:7362276-7362295 Msa0834350:intron 35.0%
GATAATGAAGACACTGAAGA+AGG - chr5_4:7362365-7362384 Msa0834350:intron 35.0%
! TTGGTTCTTTAATCTCGCAT+AGG - chr5_4:7362412-7362431 Msa0834350:CDS 35.0%
!!! TTTTGTTTTGCATGCTTGTG+TGG - chr5_4:7362557-7362576 Msa0834350:intron 35.0%
TACTATGCCATGATTTGAAC+TGG + chr5_4:7362604-7362623 None:intergenic 35.0%
! CATAGTATTGGAAGAAGTCT+TGG - chr5_4:7362617-7362636 Msa0834350:intron 35.0%
!! AGCCATAGACTTTCTAGAAT+AGG + chr5_4:7362687-7362706 None:intergenic 35.0%
ATGCAAGACAGACACTAATT+TGG - chr5_4:7362731-7362750 Msa0834350:CDS 35.0%
CATCACCAATAGTCCAAAAA+AGG - chr5_4:7363040-7363059 Msa0834350:CDS 35.0%
!!! GACAACCTTTTTTGGACTAT+TGG + chr5_4:7363048-7363067 None:intergenic 35.0%
! GTGCAGTAGTCAATTTTGTA+TGG - chr5_4:7363130-7363149 Msa0834350:CDS 35.0%
! AAATCTGGGGCAAGATATTA+TGG - chr5_4:7363263-7363282 Msa0834350:CDS 35.0%
TATGGAATATGCATCGTTGA+TGG - chr5_4:7363281-7363300 Msa0834350:CDS 35.0%
! GTATTTTTCCTGTGAGCTTT+TGG - chr5_4:7363370-7363389 Msa0834350:CDS 35.0%
CTGATATGTGATGATTACCA+TGG - chr5_4:7363423-7363442 Msa0834350:CDS 35.0%
ACCATGGATTCTATTCAAAG+TGG - chr5_4:7363439-7363458 Msa0834350:CDS 35.0%
TCCACTTTGAATAGAATCCA+TGG + chr5_4:7363443-7363462 None:intergenic 35.0%
AGCAGTGATTGACTGAATAT+TGG - chr5_4:7363569-7363588 Msa0834350:intron 35.0%
TGACTGTAGTCTATAGCAAA+AGG - chr5_4:7363641-7363660 Msa0834350:intron 35.0%
TATCAACCAGCAAAAACTCA+AGG + chr5_4:7363853-7363872 None:intergenic 35.0%
TGAAGGTCATTCAAGATGAA+TGG - chr5_4:7363934-7363953 Msa0834350:intron 35.0%
GCATAAGAAAAAGAAGCCAA+AGG - chr5_4:7363998-7364017 Msa0834350:intron 35.0%
TTAAGAATCCCAAAACCCTT+AGG + chr5_4:7364026-7364045 None:intergenic 35.0%
!!! AAGGGTTTTGGGATTCTTAA+TGG - chr5_4:7364026-7364045 Msa0834350:intron 35.0%
AGTTTCTGTATTCTGTCCAA+GGG + chr5_4:7364066-7364085 None:intergenic 35.0%
TGGAAAAGGCAAGAGAAAAT+TGG - chr5_4:7364208-7364227 Msa0834350:intron 35.0%
GGAAAAGGCAAGAGAAAATT+GGG - chr5_4:7364209-7364228 Msa0834350:intron 35.0%
GAAAAGGCAAGAGAAAATTG+GGG - chr5_4:7364210-7364229 Msa0834350:intron 35.0%
AATGGCCCAATCATTATTGA+TGG - chr5_4:7364239-7364258 Msa0834350:intron 35.0%
CTAGAGCCATCAATAATGAT+TGG + chr5_4:7364248-7364267 None:intergenic 35.0%
TGTTCAGAGTAACAATAAGG+AGG - chr5_4:7364268-7364287 Msa0834350:intron 35.0%
AGAGTTTGTGAAACCAAACA+CGG - chr5_4:7364371-7364390 Msa0834350:CDS 35.0%
! TAAAAATGTACTGGTGGTAG+TGG + chr5_4:7364467-7364486 None:intergenic 35.0%
! TCAAGGGCATAAAAATGTAC+TGG + chr5_4:7364476-7364495 None:intergenic 35.0%
TATAGGCTGATCACTTTCAA+GGG + chr5_4:7364492-7364511 None:intergenic 35.0%
! GGCTTTAATATGTCCAGTAT+AGG + chr5_4:7364509-7364528 None:intergenic 35.0%
GACTTCGATTTCTCTTACAA+AGG + chr5_4:7364564-7364583 None:intergenic 35.0%
! GAATCCCTCTAAAAGGTTAA+AGG - chr5_4:7364595-7364614 Msa0834350:intron 35.0%
TTTCTATGAAGATTCTACCG+AGG - chr5_4:7364628-7364647 Msa0834350:intron 35.0%
GTAAAACAAACCTGGTCAAT+TGG + chr5_4:7364734-7364753 None:intergenic 35.0%
CCATTATCCACATTCCTATA+CGG + chr5_4:7364833-7364852 None:intergenic 35.0%
CGTATAGGAATGTGGATAAT+GGG - chr5_4:7364831-7364850 Msa0834350:intron 35.0%
!! AAAAGCACCAATCAGAAAAG+AGG + chr5_4:7364903-7364922 None:intergenic 35.0%
!!! CTTTTCTGGTTATTGAGTTC+TGG + chr5_4:7364996-7365015 None:intergenic 35.0%
AACTCAATAACCAGAAAAGC+AGG - chr5_4:7364997-7365016 Msa0834350:intron 35.0%
!! AGAGGTTGATAAAGAAATGC+AGG - chr5_4:7365029-7365048 Msa0834350:intron 35.0%
AAATCCATGGCAAGTATATG+AGG + chr5_4:7365096-7365115 None:intergenic 35.0%
TTTGGGAATTGCAACATTTC+AGG - chr5_4:7365121-7365140 Msa0834350:CDS 35.0%
GATATAGTCACCAACTTCAA+GGG + chr5_4:7365225-7365244 None:intergenic 35.0%
TTCCTTTCCACGCAAATTAA+TGG + chr5_4:7365254-7365273 None:intergenic 35.0%
! CACCGGTATTTTATAATACC+GGG + chr5_4:7365342-7365361 None:intergenic 35.0%
!! GCACCGGTATTTTATAATAC+CGG + chr5_4:7365343-7365362 None:intergenic 35.0%
!! TCAATGGCTTGTTCATATTC+TGG - chr5_4:7365456-7365475 Msa0834350:intron 35.0%
!! CAATGGCTTGTTCATATTCT+GGG - chr5_4:7365457-7365476 Msa0834350:intron 35.0%
!! AATGGCTTGTTCATATTCTG+GGG - chr5_4:7365458-7365477 Msa0834350:intron 35.0%
CGGCAAGCATTCTTATAAAT+GGG + chr5_4:7365512-7365531 None:intergenic 35.0%
ACGGCAAGCATTCTTATAAA+TGG + chr5_4:7365513-7365532 None:intergenic 35.0%
GAATGACATTTGATCTGTCA+TGG - chr5_4:7365768-7365787 Msa0834350:intron 35.0%
!! CTCATTGCTTTTGTTTCATC+TGG + chr5_4:7365963-7365982 None:intergenic 35.0%
TGAAACAAAAGCAATGAGAG+TGG - chr5_4:7365965-7365984 Msa0834350:CDS 35.0%
GAAACAAAAGCAATGAGAGT+GGG - chr5_4:7365966-7365985 Msa0834350:CDS 35.0%
!! TTCACTTTTCATTTCACCCT+TGG + chr5_4:7366079-7366098 None:intergenic 35.0%
GTAATTGCAAGAAACATTGG+TGG - chr5_4:7366123-7366142 Msa0834350:CDS 35.0%
!! CCAACATGGCTTTAAAACTA+TGG + chr5_4:7366159-7366178 None:intergenic 35.0%
!!! CCATAGTTTTAAAGCCATGT+TGG - chr5_4:7366156-7366175 Msa0834350:CDS 35.0%
TTTCCATGCTCATGTGATAT+AGG - chr5_4:7366190-7366209 Msa0834350:CDS 35.0%
TGAAACCTGTGCATATTGAT+AGG + chr5_4:7366323-7366342 None:intergenic 35.0%
ACATTTAAACTGTAGAGCTC+AGG - chr5_4:7366358-7366377 Msa0834350:CDS 35.0%
GGCTGAAAATTACAACACAT+CGG - chr5_4:7366477-7366496 Msa0834350:CDS 35.0%
! AATTATAGGGCCATAATGGA+TGG - chr5_4:7366541-7366560 Msa0834350:CDS 35.0%
!! ATTATAGGGCCATAATGGAT+GGG - chr5_4:7366542-7366561 Msa0834350:CDS 35.0%
! ACTTTTACACCCATCCATTA+TGG + chr5_4:7366554-7366573 None:intergenic 35.0%
AATGGATGGGTGTAAAAGTT+TGG - chr5_4:7366555-7366574 Msa0834350:CDS 35.0%
!!! ATTTCAGCTAGCTTTTCTAC+TGG + chr5_4:7366598-7366617 None:intergenic 35.0%
AGCATCTAGAAAGTCTCTAA+GGG + chr5_4:7366647-7366666 None:intergenic 35.0%
TAGCATCTAGAAAGTCTCTA+AGG + chr5_4:7366648-7366667 None:intergenic 35.0%
! AAATATCCCACTTTGTTGTG+AGG - chr5_4:7366667-7366686 Msa0834350:CDS 35.0%
GTTCTGTGATTATGTGTTCG+TGG + chr5_4:7360730-7360749 None:intergenic 40.0%
! CTTCTAGAAGACAACAATGG+CGG - chr5_4:7360749-7360768 Msa0834350:CDS 40.0%
CGGAAATTGAATGTGCATTG+AGG + chr5_4:7361087-7361106 None:intergenic 40.0%
AAAAGCTTCGGTGGAAGTTT+CGG + chr5_4:7361107-7361126 None:intergenic 40.0%
! AGAGGACGATGAAGTGTTTA+GGG - chr5_4:7361221-7361240 Msa0834350:intron 40.0%
! CGATGAAGTGTTTAGGGTTA+CGG - chr5_4:7361227-7361246 Msa0834350:intron 40.0%
ACATTTATGGCCGAGATTTC+AGG - chr5_4:7361255-7361274 Msa0834350:intron 40.0%
AGAGATGAGGAAGACGAATA+AGG - chr5_4:7361399-7361418 Msa0834350:CDS 40.0%
!! GAAGACGAATAAGGTTGATG+TGG - chr5_4:7361408-7361427 Msa0834350:CDS 40.0%
AGTCGTTTGATGAGATTGTG+AGG - chr5_4:7361461-7361480 Msa0834350:CDS 40.0%
TAAGACGTTGAGGAAGTTGT+TGG - chr5_4:7361546-7361565 Msa0834350:CDS 40.0%
GCTTATAGCAGACGAACTTA+TGG - chr5_4:7361783-7361802 Msa0834350:intron 40.0%
TTTGGATACACTCAGAGTGT+CGG - chr5_4:7362190-7362209 Msa0834350:CDS 40.0%
TATCATCTTGTGAGGTCAGA+TGG - chr5_4:7362284-7362303 Msa0834350:intron 40.0%
! CTCGCATAGGTTGTGATTTT+TGG - chr5_4:7362425-7362444 Msa0834350:CDS 40.0%
CAAAATAGGATGACCTGAAG+CGG - chr5_4:7362799-7362818 Msa0834350:CDS 40.0%
AAAATAGGATGACCTGAAGC+GGG - chr5_4:7362800-7362819 Msa0834350:CDS 40.0%
! ATTTTTCCATAACCCGCTTC+AGG + chr5_4:7362815-7362834 None:intergenic 40.0%
GGATATTCTTGAAGAGGTAG+AGG - chr5_4:7362896-7362915 Msa0834350:CDS 40.0%
TATTCTTGAAGAGGTAGAGG+AGG - chr5_4:7362899-7362918 Msa0834350:CDS 40.0%
! CATGTTGAGAGAAGAAGTGT+TGG - chr5_4:7362938-7362957 Msa0834350:CDS 40.0%
CACCAATACAATGCCATTGT+CGG + chr5_4:7362979-7362998 None:intergenic 40.0%
TGGTGGCATGTAAAGATGAA+AGG - chr5_4:7362994-7363013 Msa0834350:CDS 40.0%
GTGTGATCTGAGTGTAATTC+CGG - chr5_4:7363095-7363114 Msa0834350:CDS 40.0%
!!! TGCATCGTTGATGGCAATTT+TGG - chr5_4:7363290-7363309 Msa0834350:CDS 40.0%
AAACGATACCAAAAGCTCAC+AGG + chr5_4:7363381-7363400 None:intergenic 40.0%
! TGATGGAAGTGTGCTATTCT+TGG - chr5_4:7363825-7363844 Msa0834350:intron 40.0%
! TTGGTTCCTTGAGTTTTTGC+TGG - chr5_4:7363844-7363863 Msa0834350:intron 40.0%
AAAGAAGCCAAAGGATCCTA+AGG - chr5_4:7364007-7364026 Msa0834350:intron 40.0%
AAGAAGCCAAAGGATCCTAA+GGG - chr5_4:7364008-7364027 Msa0834350:intron 40.0%
! CAAAGGATCCTAAGGGTTTT+GGG - chr5_4:7364015-7364034 Msa0834350:intron 40.0%
GTATTCTGTCCAAGGGATAT+GGG + chr5_4:7364059-7364078 None:intergenic 40.0%
TGTATTCTGTCCAAGGGATA+TGG + chr5_4:7364060-7364079 None:intergenic 40.0%
CAGTTTCTGTATTCTGTCCA+AGG + chr5_4:7364067-7364086 None:intergenic 40.0%
CTTGGACAGAATACAGAAAC+TGG - chr5_4:7364065-7364084 Msa0834350:intron 40.0%
GAGTAACAATAAGGAGGAAG+TGG - chr5_4:7364274-7364293 Msa0834350:intron 40.0%
AAGTGGCAAGTGGTAAAACT+GGG - chr5_4:7364291-7364310 Msa0834350:intron 40.0%
GAGTTTGTGAAACCAAACAC+GGG - chr5_4:7364372-7364391 Msa0834350:CDS 40.0%
AGTTTGTGAAACCAAACACG+GGG - chr5_4:7364373-7364392 Msa0834350:CDS 40.0%
AGGGCATAAAAATGTACTGG+TGG + chr5_4:7364473-7364492 None:intergenic 40.0%
GTATAGGCTGATCACTTTCA+AGG + chr5_4:7364493-7364512 None:intergenic 40.0%
TGAAAGTGATCAGCCTATAC+TGG - chr5_4:7364493-7364512 Msa0834350:CDS 40.0%
TTACAAAGGTCATGTCTGGA+TGG + chr5_4:7364550-7364569 None:intergenic 40.0%
TCTCTTACAAAGGTCATGTC+TGG + chr5_4:7364554-7364573 None:intergenic 40.0%
GCAAGTATACGTAGAGAGAA+TGG - chr5_4:7364665-7364684 Msa0834350:intron 40.0%
GATGATGATTCCAATTGACC+AGG - chr5_4:7364721-7364740 Msa0834350:intron 40.0%
! TTTGATTCTGGTTGCTGCTT+CGG - chr5_4:7364781-7364800 Msa0834350:CDS 40.0%
TATCCACATTCCTATACGGA+AGG + chr5_4:7364829-7364848 None:intergenic 40.0%
CCGTATAGGAATGTGGATAA+TGG - chr5_4:7364830-7364849 Msa0834350:intron 40.0%
TCAATAACCAGAAAAGCAGG+TGG - chr5_4:7365000-7365019 Msa0834350:intron 40.0%
CAATAACCAGAAAAGCAGGT+GGG - chr5_4:7365001-7365020 Msa0834350:intron 40.0%
TATGCCTCATATACTTGCCA+TGG - chr5_4:7365089-7365108 Msa0834350:CDS 40.0%
! TGCAACATTTCAGGTCATTG+TGG - chr5_4:7365130-7365149 Msa0834350:CDS 40.0%
GGATATAGTCACCAACTTCA+AGG + chr5_4:7365226-7365245 None:intergenic 40.0%
CCACGCAAATTAATGGTGAT+AGG + chr5_4:7365247-7365266 None:intergenic 40.0%
!! CCTATCACCATTAATTTGCG+TGG - chr5_4:7365244-7365263 Msa0834350:intron 40.0%
!! CACCATTAATTTGCGTGGAA+AGG - chr5_4:7365249-7365268 Msa0834350:intron 40.0%
!! CGTGGAAAGGAAAAGTATTC+AGG - chr5_4:7365262-7365281 Msa0834350:intron 40.0%
ATACAACCAGGTGGAAACAA+TGG - chr5_4:7365316-7365335 Msa0834350:intron 40.0%
GGCCCGGTATTATAAAATAC+CGG - chr5_4:7365337-7365356 Msa0834350:intron 40.0%
! GAAAACTCAATCAAGAGCAC+CGG + chr5_4:7365359-7365378 None:intergenic 40.0%
! GCTCTTGATTGAGTTTTCAC+AGG - chr5_4:7365361-7365380 Msa0834350:intron 40.0%
GGATAAGAGCTTCTCATTTC+AGG - chr5_4:7365382-7365401 Msa0834350:intron 40.0%
!! ATGGCTTGTTCATATTCTGG+GGG - chr5_4:7365459-7365478 Msa0834350:intron 40.0%
! AATGCTTGCCGTTACTGTTT+TGG - chr5_4:7365521-7365540 Msa0834350:intron 40.0%
AGTACTAAATATCTGGGCAC+TGG - chr5_4:7365552-7365571 Msa0834350:intron 40.0%
GTACTAAATATCTGGGCACT+GGG - chr5_4:7365553-7365572 Msa0834350:intron 40.0%
CACATCATCACCAATATCAC+TGG + chr5_4:7365811-7365830 None:intergenic 40.0%
! TACTTGCTCTACATTTTCCC+CGG - chr5_4:7365862-7365881 Msa0834350:CDS 40.0%
TCCACAATTCCTTCTTCTGA+CGG + chr5_4:7365996-7366015 None:intergenic 40.0%
TATCACATGAGCATGGAAAC+AGG + chr5_4:7366189-7366208 None:intergenic 40.0%
AAGCCTATATCACATGAGCA+TGG + chr5_4:7366196-7366215 None:intergenic 40.0%
! AAATTACAACACATCGGCTG+TGG - chr5_4:7366483-7366502 Msa0834350:CDS 40.0%
! AAGCTAGCTGAAATAATGGG+TGG - chr5_4:7366604-7366623 Msa0834350:CDS 40.0%
GGACTCACAATTCTCTCATC+AGG - chr5_4:7360770-7360789 Msa0834350:CDS 45.0%
AGAGTGGAGAAGAAGAAGAG+AGG + chr5_4:7360819-7360838 None:intergenic 45.0%
CTTCTCCACTCTTCTTCACA+AGG - chr5_4:7360827-7360846 Msa0834350:CDS 45.0%
TTGGATTTGAGAGTGGGAGA+AGG + chr5_4:7360872-7360891 None:intergenic 45.0%
!!! TTGGTGGTTTTGGGGGTTTA+GGG + chr5_4:7360915-7360934 None:intergenic 45.0%
!!! TTTGGTGGTTTTGGGGGTTT+AGG + chr5_4:7360916-7360935 None:intergenic 45.0%
!!! AGTCGGGATTTGGTGGTTTT+GGG + chr5_4:7360924-7360943 None:intergenic 45.0%
TGATTTCAGTCGGGATTTGG+TGG + chr5_4:7360931-7360950 None:intergenic 45.0%
AGTGATGAAACAAACGTGGC+CGG + chr5_4:7360996-7361015 None:intergenic 45.0%
GAGGAGTGATGAAACAAACG+TGG + chr5_4:7361000-7361019 None:intergenic 45.0%
AGATCAACGATGAGGATTCG+AGG + chr5_4:7361019-7361038 None:intergenic 45.0%
TACCGGAGATTGTTGAGGTA+GGG + chr5_4:7361057-7361076 None:intergenic 45.0%
ATACCGGAGATTGTTGAGGT+AGG + chr5_4:7361058-7361077 None:intergenic 45.0%
ACGCATCGCGATTAAACGAA+CGG + chr5_4:7361144-7361163 None:intergenic 45.0%
! AGCATTTTCTGATCGTCCTC+AGG - chr5_4:7361171-7361190 Msa0834350:intron 45.0%
!!! GATGGTTTCTGGTTTTGCGA+AGG - chr5_4:7361195-7361214 Msa0834350:intron 45.0%
! GAGAGGACGATGAAGTGTTT+AGG - chr5_4:7361220-7361239 Msa0834350:intron 45.0%
ATGTGAGTCAGGAGCTTGAA+AGG - chr5_4:7361281-7361300 Msa0834350:intron 45.0%
TGTGAGTCAGGAGCTTGAAA+GGG - chr5_4:7361282-7361301 Msa0834350:intron 45.0%
!! ACCGGATGTGGTGGATATTA+GGG - chr5_4:7361309-7361328 Msa0834350:intron 45.0%
ACCCTAATATCCACCACATC+CGG + chr5_4:7361313-7361332 None:intergenic 45.0%
GGTTCCGATGACGAAGTATA+TGG - chr5_4:7361330-7361349 Msa0834350:intron 45.0%
TCCGATGACGAAGTATATGG+TGG - chr5_4:7361333-7361352 Msa0834350:intron 45.0%
CCCACCATATACTTCGTCAT+CGG + chr5_4:7361337-7361356 None:intergenic 45.0%
CCGATGACGAAGTATATGGT+GGG - chr5_4:7361334-7361353 Msa0834350:intron 45.0%
CGATGACGAAGTATATGGTG+GGG - chr5_4:7361335-7361354 Msa0834350:intron 45.0%
!! GACGAATAAGGTTGATGTGG+AGG - chr5_4:7361411-7361430 Msa0834350:CDS 45.0%
! GGTTGATGTGGAGGATTTGA+CGG - chr5_4:7361420-7361439 Msa0834350:CDS 45.0%
AGGATTTGACGGTGGAGAAT+GGG - chr5_4:7361431-7361450 Msa0834350:CDS 45.0%
TGAGATTGTGAGGAGACAGT+TGG - chr5_4:7361471-7361490 Msa0834350:CDS 45.0%
GGAGACAGTTGGATCCAATT+TGG - chr5_4:7361482-7361501 Msa0834350:CDS 45.0%
TGGAGAATCACGGTGAAATG+TGG - chr5_4:7361685-7361704 Msa0834350:intron 45.0%
!! CATGAGCACTGATTGTTGTG+TGG - chr5_4:7362126-7362145 Msa0834350:CDS 45.0%
! CGGAGAGTTTTCGTTCTGTT+TGG - chr5_4:7362210-7362229 Msa0834350:CDS 45.0%
AACAAATGCAGTCCACAGCT+TGG + chr5_4:7362523-7362542 None:intergenic 45.0%
GCCTCAACCAGTTCAAATCA+TGG - chr5_4:7362594-7362613 Msa0834350:intron 45.0%
GCCATGATTTGAACTGGTTG+AGG + chr5_4:7362598-7362617 None:intergenic 45.0%
!! TCTTGGAAGAAGCACCAAAG+TGG - chr5_4:7362634-7362653 Msa0834350:intron 45.0%
ACACGTAAGACCTTCCACTT+TGG + chr5_4:7362651-7362670 None:intergenic 45.0%
!! AGAGAAGAAGTGTTGGCTGA+AGG - chr5_4:7362945-7362964 Msa0834350:CDS 45.0%
CACCGACAATGGCATTGTAT+TGG - chr5_4:7362974-7362993 Msa0834350:CDS 45.0%
CGACAATGGCATTGTATTGG+TGG - chr5_4:7362977-7362996 Msa0834350:CDS 45.0%
CAGTCAATCACTGCTACAGA+TGG + chr5_4:7363564-7363583 None:intergenic 45.0%
CCAAAACCCTTAGGATCCTT+TGG + chr5_4:7364017-7364036 None:intergenic 45.0%
! CCAAAGGATCCTAAGGGTTT+TGG - chr5_4:7364014-7364033 Msa0834350:intron 45.0%
GGACAGAATACAGAAACTGG+CGG - chr5_4:7364068-7364087 Msa0834350:intron 45.0%
AGATACCCCTCAGTCTGATT+TGG - chr5_4:7364172-7364191 Msa0834350:intron 45.0%
GATACCCCTCAGTCTGATTT+GGG - chr5_4:7364173-7364192 Msa0834350:intron 45.0%
AATAAGGAGGAAGTGGCAAG+TGG - chr5_4:7364281-7364300 Msa0834350:intron 45.0%
GAAGTGGCAAGTGGTAAAAC+TGG - chr5_4:7364290-7364309 Msa0834350:intron 45.0%
! AGCACTAGTTTCACCCATGT+GGG + chr5_4:7364339-7364358 None:intergenic 45.0%
GTTTGTGAAACCAAACACGG+GGG - chr5_4:7364374-7364393 Msa0834350:CDS 45.0%
TTTGTGAAACCAAACACGGG+GGG - chr5_4:7364375-7364394 Msa0834350:CDS 45.0%
CTGTAGACGATGCAGTTCTT+CGG - chr5_4:7364402-7364421 Msa0834350:CDS 45.0%
TACCGAGGTTCAGAAGTTTG+AGG - chr5_4:7364643-7364662 Msa0834350:intron 45.0%
TGCCTCAAACTTCTGAACCT+CGG + chr5_4:7364648-7364667 None:intergenic 45.0%
!! TCGGTCCATTGTTCTGGAAA+TGG - chr5_4:7364800-7364819 Msa0834350:CDS 45.0%
!! AGGAATGTGGATAATGGGCA+TGG - chr5_4:7364836-7364855 Msa0834350:intron 45.0%
! TGTCCTGCTGTTTATCAGAG+TGG - chr5_4:7364922-7364941 Msa0834350:intron 45.0%
! GTCCTGCTGTTTATCAGAGT+GGG - chr5_4:7364923-7364942 Msa0834350:intron 45.0%
TATCAGAGTGGGCATGGTTT+AGG - chr5_4:7364934-7364953 Msa0834350:intron 45.0%
!! TTTTCTCCCACCTGCTTTTC+TGG + chr5_4:7365010-7365029 None:intergenic 45.0%
AAAAGCAGGTGGGAGAAAAG+AGG - chr5_4:7365011-7365030 Msa0834350:intron 45.0%
TTCAGGTCATTGTGGACATG+CGG - chr5_4:7365138-7365157 Msa0834350:CDS 45.0%
ATTCCAGTGACCCTTGAAGT+TGG - chr5_4:7365212-7365231 Msa0834350:CDS 45.0%
CTCTTCCAGAGTTTCACATC+AGG - chr5_4:7365287-7365306 Msa0834350:intron 45.0%
ATCAGGTCGTCTATACAACC+AGG - chr5_4:7365304-7365323 Msa0834350:intron 45.0%
! CTTGTTCATATTCTGGGGGT+GGG - chr5_4:7365463-7365482 Msa0834350:intron 45.0%
TACCAGTCTGCCAGTGATAT+TGG - chr5_4:7365798-7365817 Msa0834350:intron 45.0%
AGACCAGATTATACGTAGCC+GGG + chr5_4:7365883-7365902 None:intergenic 45.0%
GAGACCAGATTATACGTAGC+CGG + chr5_4:7365884-7365903 None:intergenic 45.0%
CCACAATTCCTTCTTCTGAC+GGG + chr5_4:7365995-7366014 None:intergenic 45.0%
GAATTGTGGAAAGTGACGTG+AGG - chr5_4:7366006-7366025 Msa0834350:CDS 45.0%
AAACAGGAGATGCACCAACA+TGG + chr5_4:7366173-7366192 None:intergenic 45.0%
CCTGTGCATATTGATAGGCA+AGG + chr5_4:7366318-7366337 None:intergenic 45.0%
CCTTGCCTATCAATATGCAC+AGG - chr5_4:7366315-7366334 Msa0834350:CDS 45.0%
AACTGTAGAGCTCAGGATGT+TGG - chr5_4:7366365-7366384 Msa0834350:CDS 45.0%
GGGTTAATGCTGTGATCACA+GGG - chr5_4:7366456-7366475 Msa0834350:CDS 45.0%
!! GAGTTTCTAAGACGACTTCC+TGG - chr5_4:7366505-7366524 Msa0834350:CDS 45.0%
TGCTTGCCTCACAACAAAGT+GGG + chr5_4:7366676-7366695 None:intergenic 45.0%
TTGCTTGCCTCACAACAAAG+TGG + chr5_4:7366677-7366696 None:intergenic 45.0%
GTGTGCCTTGTGAAGAAGAG+TGG + chr5_4:7360835-7360854 None:intergenic 50.0%
!!! GGGGGTTTAGGGTTTTGAGA+TGG + chr5_4:7360904-7360923 None:intergenic 50.0%
!!! TCGGGATTTGGTGGTTTTGG+GGG + chr5_4:7360922-7360941 None:intergenic 50.0%
!!! GTCGGGATTTGGTGGTTTTG+GGG + chr5_4:7360923-7360942 None:intergenic 50.0%
!!! CAGTCGGGATTTGGTGGTTT+TGG + chr5_4:7360925-7360944 None:intergenic 50.0%
CGGTGATTTCAGTCGGGATT+TGG + chr5_4:7360934-7360953 None:intergenic 50.0%
GAGAGAGTGACGGTGGTTAA+CGG + chr5_4:7360966-7360985 None:intergenic 50.0%
AGGAATAGAGAGAGTGACGG+TGG + chr5_4:7360973-7360992 None:intergenic 50.0%
CGGAGGAATAGAGAGAGTGA+CGG + chr5_4:7360976-7360995 None:intergenic 50.0%
CGTCACTCTCTCTATTCCTC+CGG - chr5_4:7360974-7360993 Msa0834350:intron 50.0%
CTCCCTACCTCAACAATCTC+CGG - chr5_4:7361052-7361071 Msa0834350:intron 50.0%
AAACCAGAAACCATCGCCTG+AGG + chr5_4:7361190-7361209 None:intergenic 50.0%
CTAATATCCACCACATCCGG+TGG + chr5_4:7361310-7361329 None:intergenic 50.0%
!! CACCGGATGTGGTGGATATT+AGG - chr5_4:7361308-7361327 Msa0834350:intron 50.0%
TGATGTGGAGGATTTGACGG+TGG - chr5_4:7361423-7361442 Msa0834350:CDS 50.0%
GAGGATTTGACGGTGGAGAA+TGG - chr5_4:7361430-7361449 Msa0834350:CDS 50.0%
TCGTAGACTAGGGCTCTGTT+TGG - chr5_4:7361732-7361751 Msa0834350:intron 50.0%
AGATATGCCATGCCAAGCTG+TGG - chr5_4:7362508-7362527 Msa0834350:intron 50.0%
! GTTTTGCATGCTTGTGTGGC+AGG - chr5_4:7362561-7362580 Msa0834350:intron 50.0%
!! GGAAGAAGCACCAAAGTGGA+AGG - chr5_4:7362638-7362657 Msa0834350:intron 50.0%
GGTAGAGGAGGAAAGACGAA+AGG - chr5_4:7362911-7362930 Msa0834350:CDS 50.0%
GAGGAGGAAAGACGAAAGGA+AGG - chr5_4:7362915-7362934 Msa0834350:CDS 50.0%
GAAGGTGAAGACACCGACAA+TGG - chr5_4:7362963-7362982 Msa0834350:CDS 50.0%
AACTGGCGGCATCAATAAGC+AGG - chr5_4:7364082-7364101 Msa0834350:intron 50.0%
TCCACCCAAATCAGACTGAG+GGG + chr5_4:7364180-7364199 None:intergenic 50.0%
GTCCACCCAAATCAGACTGA+GGG + chr5_4:7364181-7364200 None:intergenic 50.0%
TGTCCACCCAAATCAGACTG+AGG + chr5_4:7364182-7364201 None:intergenic 50.0%
GATTTGGGTGGACATGTTCG+TGG - chr5_4:7364188-7364207 Msa0834350:intron 50.0%
GGTGGACATGTTCGTGGAAA+AGG - chr5_4:7364194-7364213 Msa0834350:intron 50.0%
! CAGCACTAGTTTCACCCATG+TGG + chr5_4:7364340-7364359 None:intergenic 50.0%
TACAGATATCCCCCCGTGTT+TGG + chr5_4:7364387-7364406 None:intergenic 50.0%
TAGACGATGCAGTTCTTCGG+AGG - chr5_4:7364405-7364424 Msa0834350:CDS 50.0%
GCATACCTTTCCTGATGCCA+TGG - chr5_4:7364427-7364446 Msa0834350:CDS 50.0%
TCTTGCCATGGCATCAGGAA+AGG + chr5_4:7364435-7364454 None:intergenic 50.0%
CTGATGCCATGGCAAGAGAT+GGG - chr5_4:7364438-7364457 Msa0834350:CDS 50.0%
GGCAGCCATTTCCAGAACAA+TGG + chr5_4:7364808-7364827 None:intergenic 50.0%
GAAATGGCTGCCTTCCGTAT+AGG - chr5_4:7364816-7364835 Msa0834350:CDS 50.0%
CTGCCTTCCGTATAGGAATG+TGG - chr5_4:7364823-7364842 Msa0834350:intron 50.0%
TGCCCACTCTGATAAACAGC+AGG + chr5_4:7364928-7364947 None:intergenic 50.0%
GCTGTTTATCAGAGTGGGCA+TGG - chr5_4:7364928-7364947 Msa0834350:intron 50.0%
TCAGGTCATTGTGGACATGC+GGG - chr5_4:7365139-7365158 Msa0834350:CDS 50.0%
TCACCAACTTCAAGGGTCAC+TGG + chr5_4:7365218-7365237 None:intergenic 50.0%
GACGACCTGATGTGAAACTC+TGG + chr5_4:7365295-7365314 None:intergenic 50.0%
AGGTCGTCTATACAACCAGG+TGG - chr5_4:7365307-7365326 Msa0834350:intron 50.0%
! GCTTGTTCATATTCTGGGGG+TGG - chr5_4:7365462-7365481 Msa0834350:intron 50.0%
!!! GGGTGGGATGTTGTTTTGAC+AGG - chr5_4:7365479-7365498 Msa0834350:intron 50.0%
!!! GGGATGTTGTTTTGACAGGC+AGG - chr5_4:7365483-7365502 Msa0834350:intron 50.0%
CACCAATATCACTGGCAGAC+TGG + chr5_4:7365803-7365822 None:intergenic 50.0%
TTCCCCGGCTACGTATAATC+TGG - chr5_4:7365877-7365896 Msa0834350:CDS 50.0%
GACCAGATTATACGTAGCCG+GGG + chr5_4:7365882-7365901 None:intergenic 50.0%
CCCGTCAGAAGAAGGAATTG+TGG - chr5_4:7365992-7366011 Msa0834350:CDS 50.0%
AAGGTAGCTTCATGCTGCCA+AGG - chr5_4:7366059-7366078 Msa0834350:CDS 50.0%
AGGTAGCTTCATGCTGCCAA+GGG - chr5_4:7366060-7366079 Msa0834350:CDS 50.0%
GGGGTTAATGCTGTGATCAC+AGG - chr5_4:7366455-7366474 Msa0834350:CDS 50.0%
AGGTCGGCGGTGATTTCAGT+CGG + chr5_4:7360941-7360960 None:intergenic 55.0%
GATGAAACAAACGTGGCCGG+AGG + chr5_4:7360993-7361012 None:intergenic 55.0%
TTCTGATCGTCCTCAGGCGA+TGG - chr5_4:7361177-7361196 Msa0834350:intron 55.0%
!!! CTGGTTTTGCGAAGGCAGAG+AGG - chr5_4:7361203-7361222 Msa0834350:intron 55.0%
GGAGCTTGAAAGGGATCCAC+CGG - chr5_4:7361291-7361310 Msa0834350:intron 55.0%
TGAAAGGGATCCACCGGATG+TGG - chr5_4:7361297-7361316 Msa0834350:intron 55.0%
ATGCAGTCCACAGCTTGGCA+TGG + chr5_4:7362518-7362537 None:intergenic 55.0%
!! GGATGACCTGAAGCGGGTTA+TGG - chr5_4:7362806-7362825 Msa0834350:CDS 55.0%
GGAGTCACTCCCATATCCCT+TGG - chr5_4:7364047-7364066 Msa0834350:intron 55.0%
! GCAGGAGCATGATGCACTTC+TGG - chr5_4:7364100-7364119 Msa0834350:intron 55.0%
!! ACCCCTCAGTCTGATTTGGG+TGG - chr5_4:7364176-7364195 Msa0834350:intron 55.0%
CCATCTCTTGCCATGGCATC+AGG + chr5_4:7364440-7364459 None:intergenic 55.0%
CCTGATGCCATGGCAAGAGA+TGG - chr5_4:7364437-7364456 Msa0834350:CDS 55.0%
TGGCTTCCCATCTCTTGCCA+TGG + chr5_4:7364447-7364466 None:intergenic 55.0%
GCTGCTTCGGTCCATTGTTC+TGG - chr5_4:7364794-7364813 Msa0834350:CDS 55.0%
ACCAGGTGGAAACAATGGCC+CGG - chr5_4:7365321-7365340 Msa0834350:intron 55.0%
GGTCGGCGGTGATTTCAGTC+GGG + chr5_4:7360940-7360959 None:intergenic 60.0%
ACGGTGGTTAACGGCGAGGT+CGG + chr5_4:7360957-7360976 None:intergenic 60.0%
AGTGACGGTGGTTAACGGCG+AGG + chr5_4:7360961-7360980 None:intergenic 60.0%
CGTCCTCAGGCGATGGTTTC+TGG - chr5_4:7361184-7361203 Msa0834350:intron 60.0%
AAGGGATCCACCGGATGTGG+TGG - chr5_4:7361300-7361319 Msa0834350:intron 60.0%
ACCGGGCCATTGTTTCCACC+TGG + chr5_4:7365325-7365344 None:intergenic 60.0%
GTGGGTGTCCCGTCAGAAGA+AGG - chr5_4:7365984-7366003 Msa0834350:CDS 60.0%
GTGGTTAACGGCGAGGTCGG+CGG + chr5_4:7360954-7360973 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 7360591 7366829 7360591 ID=Msa0834350;Name=Msa0834350
chr5_4 mRNA 7360591 7366829 7360591 ID=Msa0834350-mRNA-1;Parent=Msa0834350;Name=Msa0834350-mRNA-1;_AED=0.05;_eAED=0.05;_QI=102|1|1|1|0.88|0.8|10|142|984
chr5_4 exon 7360591 7360943 7360591 ID=Msa0834350-mRNA-1:exon:3293;Parent=Msa0834350-mRNA-1
chr5_4 exon 7361393 7361616 7361393 ID=Msa0834350-mRNA-1:exon:3292;Parent=Msa0834350-mRNA-1
chr5_4 exon 7362017 7362277 7362017 ID=Msa0834350-mRNA-1:exon:3291;Parent=Msa0834350-mRNA-1
chr5_4 exon 7362370 7362480 7362370 ID=Msa0834350-mRNA-1:exon:3290;Parent=Msa0834350-mRNA-1
chr5_4 exon 7362678 7363481 7362678 ID=Msa0834350-mRNA-1:exon:3289;Parent=Msa0834350-mRNA-1
chr5_4 exon 7364359 7364523 7364359 ID=Msa0834350-mRNA-1:exon:3288;Parent=Msa0834350-mRNA-1
chr5_4 exon 7364752 7364837 7364752 ID=Msa0834350-mRNA-1:exon:3287;Parent=Msa0834350-mRNA-1
chr5_4 exon 7365034 7365257 7365034 ID=Msa0834350-mRNA-1:exon:3286;Parent=Msa0834350-mRNA-1
chr5_4 exon 7365839 7366758 7365839 ID=Msa0834350-mRNA-1:exon:3285;Parent=Msa0834350-mRNA-1
chr5_4 exon 7366779 7366829 7366779 ID=Msa0834350-mRNA-1:exon:3284;Parent=Msa0834350-mRNA-1
chr5_4 five_prime_UTR 7366779 7366829 7366779 ID=Msa0834350-mRNA-1:five_prime_utr;Parent=Msa0834350-mRNA-1
chr5_4 five_prime_UTR 7366708 7366758 7366708 ID=Msa0834350-mRNA-1:five_prime_utr;Parent=Msa0834350-mRNA-1
chr5_4 CDS 7365839 7366707 7365839 ID=Msa0834350-mRNA-1:cds;Parent=Msa0834350-mRNA-1
chr5_4 CDS 7365034 7365257 7365034 ID=Msa0834350-mRNA-1:cds;Parent=Msa0834350-mRNA-1
chr5_4 CDS 7364752 7364837 7364752 ID=Msa0834350-mRNA-1:cds;Parent=Msa0834350-mRNA-1
chr5_4 CDS 7364359 7364523 7364359 ID=Msa0834350-mRNA-1:cds;Parent=Msa0834350-mRNA-1
chr5_4 CDS 7362678 7363481 7362678 ID=Msa0834350-mRNA-1:cds;Parent=Msa0834350-mRNA-1
chr5_4 CDS 7362370 7362480 7362370 ID=Msa0834350-mRNA-1:cds;Parent=Msa0834350-mRNA-1
chr5_4 CDS 7362017 7362277 7362017 ID=Msa0834350-mRNA-1:cds;Parent=Msa0834350-mRNA-1
chr5_4 CDS 7361393 7361616 7361393 ID=Msa0834350-mRNA-1:cds;Parent=Msa0834350-mRNA-1
chr5_4 CDS 7360733 7360943 7360733 ID=Msa0834350-mRNA-1:cds;Parent=Msa0834350-mRNA-1
chr5_4 three_prime_UTR 7360591 7360732 7360591 ID=Msa0834350-mRNA-1:three_prime_utr;Parent=Msa0834350-mRNA-1
Gene Sequence

>Msa0834350

ATGGTTCTTCAATTCCACGAACACATAATCACAGAACTTCTAGAAGACAACAATGGCGGACTCACAATTCTCTCATCAGGTCTCTCCTTATCAAAACTCATCTCCTCTCTTCTTCTTCTCCACTCTTCTTCACAAGGCACACTTCTCATTCTCTCTCCTTCTCCCACTCTCAAATCCAAAATCAATTTCCATCTCAAAACCCTAAACCCCCAAAACCACCAAATCCCGACTGAAATCACCGCCGACCTCGCCGTTAACCACCGTCACTCTCTCTATTCCTCCGGCCACGTTTGTTTCATCACTCCTCGAATCCTCATCGTTGATCTTTTAACAAACAAACTCCCTACCTCAACAATCTCCGGTATATTAATCCTCAATGCACATTCAATTTCCGAAACTTCCACCGAAGCTTTTATTGTAAGAATTTTCCGTTCGTTTAATCGCGATGCGTATGTTAGAGCATTTTCTGATCGTCCTCAGGCGATGGTTTCTGGTTTTGCGAAGGCAGAGAGGACGATGAAGTGTTTAGGGTTACGGAAGTTACATTTATGGCCGAGATTTCAGGTTTATGTGAGTCAGGAGCTTGAAAGGGATCCACCGGATGTGGTGGATATTAGGGTTCCGATGACGAAGTATATGGTGGGGATTCAGAAAGCGATTGTTGAAGTTATGGATGCATGTTTGAAAGAGATGAGGAAGACGAATAAGGTTGATGTGGAGGATTTGACGGTGGAGAATGGGTTGTTTAAGTCGTTTGATGAGATTGTGAGGAGACAGTTGGATCCAATTTGGCATACTTTAGGGAAGAAGACTAAGCAGCTTGTTTCTGATCTTAAGACGTTGAGGAAGTTGTTGGATTATCTAGTCAGGTATGATGCGGTGACTTACTTGAAATATTTGGATACACTCAGAGTGTCGGAGAGTTTTCGTTCTGTTTGGATATTTGCAGAGGCAAGCTATAAGATATTTGACTATGCAAAGAAACGTGTTTATCATCTTGTGAGGTCAGATGGTGTGAAATTGAACGAGTCTAGTAAGAATGTCAAAAACAAAAAGAAAAAAGGCAAAGGGGATAATGAAGACACTGAAGAAGGTGATGTCACTGCCTCAACCAGTTCAAATCATGGCATAGTATTGGAAGAAGTCTTGGAAGAAGCACCAAAGTGGAAGGTCTTACGTGATATTCTTGAAGAGGTAGAGGAGGAAAGACGAAAGGAAGGCATGTTGAGAGAAGAAGTGTTGGCTGAAGGTGAAGACACCGACAATGGCATTGTATTGGTGGCATGTAAAGATGAAAGGTCGTGCTTGCAGCTTGAAGAATGCATCACCAATAGTCCAAAAAAGGTCATTCAAGATGAATGGAAGAAGTACTTACTGAACAAAGTACAACTGCGTGATGTAGTGCATAAGAAAAAGAAGCCAAAGGATCCTAAGGGTTTTGGGATTCTTAATGGAGTCACTCCCATATCCCTTGGACAGAATACAGAAACTGGCGGCATCAATAAGCAGGAGCATGATGCACTTCTGGCAGCAGCTTCGAAACTGCGAAATCTTTCTGAAAAAAATCATGTTGTTGAAGATACCCCTCAGTCTGATTTGGGTGGACATGTTCGTGGAAAAGGCAAGAGAAAATTGGGGAATAGAAATGGCCCAATCATTATTGATGGCTCTAGTGTTCAGAGTAACAATAAGGAGGAAGTGGCAAGTGGTAAAACTGGGATATCCGATTCAAAAAATAAAGCCCACATGGGTGAAACTAGTGCTGTCAGTAATGATAGAGTTTGTGAAACCAAACACGGGGGGATATCTGTAGACGATGCAGTTCTTCGGAGGCATACCTTTCCTGATGCCATGGCAAGAGATGGGAAGCCACTACCACCAGTACATTTTTATGCCCTTGAAAGTGATCAGCCTATACTGGACATATTAAAGCCCTCTATAATTGTCGTTTACCATCCAGACATGACCTTTGTAAGAGAAATCGAAGTCTACAAAGCTGAGAATCCCTCTAAAAGGTTAAAGGTATACTTTATTTTCTATGAAGATTCTACCGAGGTTCAGAAGTTTGAGGCAAGTATACGTAGAGAGAATGGAGCATTTGAATCTTTGATCAGACAAAAATCTATGATGATGATTCCAATTGACCAGAGTGGGCATGGTTTAGGATTTAATTCTACCCTAGATTCAGATTTAAATACTACCCAGAACTCAATAACCAGAAAAGCAGGTGGGAGAAAAGAGGTTGATAAAGAAATGCAGGTCATTGTGGACATGCGGGAGTTCATGAGCAGCCTTCCAAATATTCTTCATCAAAAGGGAATGCGCATAATTCCAGTGACCCTTGAAGTTGGTGACTATATCCTATCACCATTAATTTGCGTGGAAAGGAAAAGTATTCAGGATCTCTTCCAGAGTTTCACATCAGGTCGTCTATACAACCAGGTGGAAACAATGGCCCGGTATTATAAAATACCGGTGCTCTTGATTGAGTTTTCACAGGATAAGAGCTTCTCATTTCAGTCTGCCAGTGATATTGGTGATGATGTGACGCCCAATAGCATTATATCAAAGTTGTCATTACTTGCTCTACATTTTCCCCGGCTACGTATAATCTGGTCTCGAAGTTTGCATGCAACTTCTGAAATATTTGCTTCACTAAAGGCAAATCAAGATGAACCAGATGAAACAAAAGCAATGAGAGTGGGTGTCCCGTCAGAAGAAGGAATTGTGGAAAGTGACGTGAGGGCTGAAAATTACAACACATCGGCTGTGGAGTTTCTAAGACGACTTCCTGGTGTTACAGATTCTAATTATAGGGCCATAATGGATGGGTGTAAAAGTTTGGCAGAACTTGCACTTCTTCCAGTAGAAAAGCTAGCTGAAATAATGGGTGGTCATAAAGCTGCTCGTACCCTTAGAGACTTTCTAGATGCTAAATATCCCACTTTGTTGTGA
Protein sequence

>Msa0834350

MVLQFHEHIITELLEDNNGGLTILSSGLSLSKLISSLLLLHSSSQGTLLILSPSPTLKSKINFHLKTLNPQNHQIPTEITADLAVNHRHSLYSSGHVCFITPRILIVDLLTNKLPTSTISGILILNAHSISETSTEAFIVRIFRSFNRDAYVRAFSDRPQAMVSGFAKAERTMKCLGLRKLHLWPRFQVYVSQELERDPPDVVDIRVPMTKYMVGIQKAIVEVMDACLKEMRKTNKVDVEDLTVENGLFKSFDEIVRRQLDPIWHTLGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRVSESFRSVWIFAEASYKIFDYAKKRVYHLVRSDGVKLNESSKNVKNKKKKGKGDNEDTEEGDVTASTSSNHGIVLEEVLEEAPKWKVLRDILEEVEEERRKEGMLREEVLAEGEDTDNGIVLVACKDERSCLQLEECITNSPKKVIQDEWKKYLLNKVQLRDVVHKKKKPKDPKGFGILNGVTPISLGQNTETGGINKQEHDALLAAASKLRNLSEKNHVVEDTPQSDLGGHVRGKGKRKLGNRNGPIIIDGSSVQSNNKEEVASGKTGISDSKNKAHMGETSAVSNDRVCETKHGGISVDDAVLRRHTFPDAMARDGKPLPPVHFYALESDQPILDILKPSIIVVYHPDMTFVREIEVYKAENPSKRLKVYFIFYEDSTEVQKFEASIRRENGAFESLIRQKSMMMIPIDQSGHGLGFNSTLDSDLNTTQNSITRKAGGRKEVDKEMQVIVDMREFMSSLPNILHQKGMRIIPVTLEVGDYILSPLICVERKSIQDLFQSFTSGRLYNQVETMARYYKIPVLLIEFSQDKSFSFQSASDIGDDVTPNSIISKLSLLALHFPRLRIIWSRSLHATSEIFASLKANQDEPDETKAMRVGVPSEEGIVESDVRAENYNTSAVEFLRRLPGVTDSNYRAIMDGCKSLAELALLPVEKLAEIMGGHKAARTLRDFLDAKYPTLL*