AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0799360

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0799360 MtrunA17_Chr5g0399831 98.069 984 18 1 1 983 1 984 0.0 1990
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0799360 AT5G41150.1 66.230 992 290 10 1 983 1 956 0.0 1280
Msa0799360 AT5G41150.3 65.330 923 275 9 1 914 1 887 0.0 1155
Msa0799360 AT5G41150.2 61.740 724 232 10 1 715 1 688 0.0 825
Msa0799360 AT5G41150.4 61.740 724 232 10 1 715 1 688 0.0 825

Find 250 sgRNAs with CRISPR-Local

Find 448 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGTCCTCAGGCCATGGTTTC+TGG 0.039215 5_3:-12537739 Msa0799360:CDS
CAGTCGGGATTTGGTGAATT+TGG 0.093840 5_3:+12538001 None:intergenic
TTTGAGATGGAAATTGATTT+TGG 0.169113 5_3:+12538035 None:intergenic
CACCGGATGTGGTGGATATT+AGG 0.180382 5_3:-12537615 Msa0799360:CDS
GGATAAGAGCTTCTCATTTC+AGG 0.182092 5_3:-12533570 Msa0799360:intron
TTCCTTTCCACGCAAATTAA+TGG 0.186365 5_3:+12533701 None:intergenic
ACATTTATGGCCGAGGTTTC+AGG 0.187381 5_3:-12537668 Msa0799360:CDS
TGTATTCTGTCCAAGGGATA+TGG 0.222718 5_3:+12534892 None:intergenic
GGTGACTTACTTGAAATATT+TGG 0.224245 5_3:-12536779 Msa0799360:CDS
AGTCGGGATTTGGTGAATTT+GGG 0.228651 5_3:+12538002 None:intergenic
CCAAAGGATCCTAAGGGTTT+TGG 0.230872 5_3:-12534935 Msa0799360:CDS
GATCCAATTTGGCATACTTT+AGG 0.235008 5_3:-12537430 Msa0799360:CDS
TTCCCTAAAGTATGCCAAAT+TGG 0.239779 5_3:+12537427 None:intergenic
GTGTTACAGATTCTAATTAT+AGG 0.253075 5_3:-12532417 Msa0799360:CDS
GGTTACGGAAGTTACATTTA+TGG 0.258472 5_3:-12537681 Msa0799360:CDS
CAACTTTGATATAATGCTAT+TGG 0.284544 5_3:+12533113 None:intergenic
CGTGGAAAGGAAAAGTATTC+AGG 0.296025 5_3:-12533690 Msa0799360:CDS
TGGAAAAGGCAAGAGAAAAT+TGG 0.303152 5_3:-12534744 Msa0799360:CDS
GAATCCCTCTAAAAGGTTAA+AGG 0.308417 5_3:-12534357 Msa0799360:CDS
TATCAGAGTGGGCATGGTTT+AGG 0.314337 5_3:-12534018 Msa0799360:intron
TAGCATCTAGAAAGTCTCTA+AGG 0.318207 5_3:+12532299 None:intergenic
AGATACCCCTCAGTCTGATT+TGG 0.321552 5_3:-12534780 Msa0799360:CDS
GAGAGGACGATGAAGTGTTT+AGG 0.322791 5_3:-12537703 Msa0799360:CDS
ATCCAATTTGGCATACTTTA+GGG 0.326230 5_3:-12537429 Msa0799360:CDS
GAAAGCGATTGTTGAGGTTA+TGG 0.328674 5_3:-12537560 Msa0799360:CDS
TACCAGTCTGCCAGTGATAT+TGG 0.329348 5_3:-12533150 Msa0799360:intron
AGAAAAGCTAGCTGAAATAA+TGG 0.331086 5_3:-12532344 Msa0799360:CDS
TCCAAATATTCTTCATCAAA+AGG 0.334364 5_3:-12533774 Msa0799360:CDS
CGGTGATTTCAGTCGGGATT+TGG 0.338695 5_3:+12537992 None:intergenic
ACCGGATGTGGTGGATATTA+GGG 0.338897 5_3:-12537614 Msa0799360:CDS
AAGCTGAGAATCCCTCTAAA+AGG 0.342926 5_3:-12534364 Msa0799360:CDS
CCAAAACCCTTAGGATCCTT+TGG 0.343817 5_3:+12534935 None:intergenic
TAGTATTTAAATCTGAATCT+AGG 0.348403 5_3:+12533983 None:intergenic
GCAGGAGCATGATGCACTTC+TGG 0.348700 5_3:-12534849 Msa0799360:CDS
TGTTACAGATTCTAATTATA+GGG 0.349584 5_3:-12532416 Msa0799360:CDS
AACTTTGATATAATGCTATT+GGG 0.350549 5_3:+12533114 None:intergenic
AGAGGACGATGAAGTGTTTA+GGG 0.352656 5_3:-12537702 Msa0799360:CDS
AAAAGCTTCGGTGGAAGTTT+CGG 0.357591 5_3:+12537819 None:intergenic
AGAGATGAGGAAGACGAATA+AGG 0.361182 5_3:-12537524 Msa0799360:CDS
CTGCATCAATATATCATCAT+TGG 0.362339 5_3:-12532186 Msa0799360:three_prime_UTR
TGAAAGTGATCAGCCTATAC+TGG 0.367474 5_3:-12534459 Msa0799360:CDS
GTAAAACAAACCTGGTCAAT+TGG 0.376126 5_3:+12534221 None:intergenic
GGAAAAGGCAAGAGAAAATT+GGG 0.376193 5_3:-12534743 Msa0799360:CDS
GAAGTGGCAAGTGGTAAAAC+TGG 0.379166 5_3:-12534662 Msa0799360:CDS
TTCTAATTATAGGGCCATAA+TGG 0.379915 5_3:-12532407 Msa0799360:CDS
CCATCTCTTGCCATGGCATC+AGG 0.379982 5_3:+12534515 None:intergenic
AGACAATTCATTTGTCGAAA+TGG 0.381307 5_3:-12532248 Msa0799360:three_prime_UTR
GAACCATTGATGAATAATAA+TGG 0.385614 5_3:+12538226 None:intergenic
GGAGACAGTTGGATCCAATT+TGG 0.389564 5_3:-12537441 Msa0799360:CDS
AATGGATGGGTGTAAAAGTT+TGG 0.391473 5_3:-12532389 Msa0799360:CDS
TGAAATATTTGCTTCACTAA+AGG 0.402091 5_3:-12533025 Msa0799360:CDS
CCACGCAAATTAATGGTGAT+AGG 0.403076 5_3:+12533708 None:intergenic
CGATGAAGTGTTTAGGGTTA+CGG 0.407072 5_3:-12537696 Msa0799360:CDS
GAGAGAGTGACGGTGGTTAA+CGG 0.411126 5_3:+12537960 None:intergenic
GAGTTTCTAAGACGACTTCC+TGG 0.412129 5_3:-12532439 Msa0799360:CDS
GGTGGACATGTTCGTGGAAA+AGG 0.414905 5_3:-12534758 Msa0799360:CDS
AGAAAATTGGGGAATAGAAA+TGG 0.415060 5_3:-12534731 Msa0799360:CDS
GAAAAGCTAGCTGAAATAAT+GGG 0.415675 5_3:-12532343 Msa0799360:CDS
GATACCCCTCAGTCTGATTT+GGG 0.419551 5_3:-12534779 Msa0799360:CDS
TAAGACGTTGAGGAAGTTGT+TGG 0.419685 5_3:-12537377 Msa0799360:CDS
GAGGATTTGACGGTGGAGAA+TGG 0.423362 5_3:-12537493 Msa0799360:CDS
CATCCATTATTATTCATCAA+TGG 0.429516 5_3:-12538229 Msa0799360:exon
GGTTCCGATGACGAAGTATA+TGG 0.431073 5_3:-12537593 Msa0799360:CDS
CTTGGACAGAATACAGAAAC+TGG 0.434228 5_3:-12534884 Msa0799360:CDS
TAGTGTTCAGAGTAACAATA+AGG 0.435873 5_3:-12534687 Msa0799360:CDS
TCTCTTACAAAGGTCATGTC+TGG 0.440456 5_3:+12534401 None:intergenic
CCAAATATTCTTCATCAAAA+GGG 0.444882 5_3:-12533773 Msa0799360:CDS
GTATAGGCTGATCACTTTCA+AGG 0.445016 5_3:+12534462 None:intergenic
TTGGATTTGAGAGTGGGAGA+AGG 0.445667 5_3:+12538054 None:intergenic
TTCTGATCGTCCTCAGGCCA+TGG 0.446758 5_3:-12537746 Msa0799360:CDS
CATAGTATTGGAAGAAGTCT+TGG 0.450907 5_3:-12536332 Msa0799360:CDS
TTCCCCGGCTACGTATAATC+TGG 0.457803 5_3:-12533071 Msa0799360:CDS
TTGGAATTGAAAATTCTTGA+AGG 0.459000 5_3:+12538287 None:intergenic
CTAGAGCCATCAATAATGAT+TGG 0.459040 5_3:+12534707 None:intergenic
CACCATTAATTTGCGTGGAA+AGG 0.459042 5_3:-12533703 Msa0799360:CDS
AGGATTTGACGGTGGAGAAT+GGG 0.460766 5_3:-12537492 Msa0799360:CDS
TGCATCAATATATCATCATT+GGG 0.460824 5_3:-12532185 Msa0799360:three_prime_UTR
AGTTGTTGGATTATCTAGTC+AGG 0.461734 5_3:-12537363 Msa0799360:intron
AATGGCCCAATCATTATTGA+TGG 0.462309 5_3:-12534713 Msa0799360:CDS
GGATATTCTTGAAGAGGTAG+AGG 0.463581 5_3:-12536053 Msa0799360:CDS
GGACTCACAATTCTCTCATC+AGG 0.464055 5_3:-12538153 Msa0799360:CDS
TACTATGCCATGATTTGAAC+TGG 0.464434 5_3:+12536348 None:intergenic
AATCCTTACAATAAAAGCTT+CGG 0.467080 5_3:+12537807 None:intergenic
TTCAAATCATGGCATAGTAT+TGG 0.467334 5_3:-12536344 Msa0799360:CDS
GTATTCTGTCCAAGGGATAT+GGG 0.469017 5_3:+12534893 None:intergenic
CTTCTCCACTCTTCTTCACA+AGG 0.470225 5_3:-12538096 Msa0799360:CDS
GACTTCGATTTCTCTTACAA+AGG 0.470567 5_3:+12534391 None:intergenic
AAAGAAGCCAAAGGATCCTA+AGG 0.472095 5_3:-12534942 Msa0799360:CDS
TCCACAATTCCTTCTTCTGA+CGG 0.475046 5_3:+12532955 None:intergenic
GCTGTTTATCAGAGTGGGCA+TGG 0.475784 5_3:-12534024 Msa0799360:intron
GGATATAGTCACCAACTTCA+AGG 0.475904 5_3:+12533729 None:intergenic
CAGTTTCTGTATTCTGTCCA+AGG 0.478718 5_3:+12534885 None:intergenic
CACCAATACAATGCCATTGT+CGG 0.479002 5_3:+12535973 None:intergenic
TGAAGGTCATTCAAGATGAA+TGG 0.479387 5_3:-12535015 Msa0799360:intron
TGCATTGAGGATTAATATAC+CGG 0.483156 5_3:+12537852 None:intergenic
GCAAGTATACGTAGAGAGAA+TGG 0.483469 5_3:-12534287 Msa0799360:CDS
ACCCTAATATCCACCACATC+CGG 0.483836 5_3:+12537613 None:intergenic
CCACAATTCCTTCTTCTGAC+GGG 0.485112 5_3:+12532956 None:intergenic
CTCCCTACCTCAACAATCTC+CGG 0.486509 5_3:-12537871 Msa0799360:CDS
CGGAAATTGAATGTGCATTG+AGG 0.491952 5_3:+12537839 None:intergenic
CTCTTCCAGAGTTTCACATC+AGG 0.496021 5_3:-12533665 Msa0799360:CDS
CACCGACAATGGCATTGTAT+TGG 0.499306 5_3:-12535975 Msa0799360:CDS
AATTATAGGGCCATAATGGA+TGG 0.499805 5_3:-12532403 Msa0799360:CDS
AGAGGATGATAAAGAAATGC+AGG 0.500318 5_3:-12533923 Msa0799360:intron
CTGTAGACGATGCAGTTCTT+CGG 0.500641 5_3:-12534550 Msa0799360:CDS
ACGTGAGTCAAGAACTTGAA+AGG 0.500883 5_3:-12537642 Msa0799360:CDS
CGTGAGTCAAGAACTTGAAA+GGG 0.502707 5_3:-12537641 Msa0799360:CDS
CGACAATGGCATTGTATTGG+TGG 0.503087 5_3:-12535972 Msa0799360:CDS
TTAAGAATCCCAAAACCCTT+AGG 0.504091 5_3:+12534926 None:intergenic
CCTGATGCCATGGCAAGAGA+TGG 0.505249 5_3:-12534515 Msa0799360:CDS
AGACCAGATTATACGTAGCC+GGG 0.510695 5_3:+12533068 None:intergenic
GAGTAACAATAAGGAGGAAG+TGG 0.511062 5_3:-12534678 Msa0799360:CDS
GGTTGATGTGGAGGATTTGA+CGG 0.512007 5_3:-12537503 Msa0799360:CDS
GTCGGGATTTGGTGAATTTG+GGG 0.513349 5_3:+12538003 None:intergenic
TGAAAGGGATCCACCGGATG+TGG 0.514634 5_3:-12537626 Msa0799360:CDS
AGGTCGGCGGTGATTTCAGT+CGG 0.517477 5_3:+12537985 None:intergenic
TAGAGCCATCAATAATGATT+GGG 0.519009 5_3:+12534708 None:intergenic
AACTGGCGGCATCAATAAGC+AGG 0.520303 5_3:-12534867 Msa0799360:CDS
AGTATTTAAATCTGAATCTA+GGG 0.521076 5_3:+12533984 None:intergenic
GTGGGTGTCCCGTCAGAAGA+AGG 0.521697 5_3:-12532964 Msa0799360:CDS
CTCACGTAAACCTGAAACCT+CGG 0.522328 5_3:+12537658 None:intergenic
AGAGTGGAGAAGAAGAAGAG+AGG 0.523516 5_3:+12538107 None:intergenic
GACGAATAAGGTTGATGTGG+AGG 0.525666 5_3:-12537512 Msa0799360:CDS
GGAGTCACTCCCATATCCCT+TGG 0.526144 5_3:-12534902 Msa0799360:CDS
TCACCAACTTCAAGGGTCAC+TGG 0.527041 5_3:+12533737 None:intergenic
TATCATCTTGTGAGGTCAGA+TGG 0.528309 5_3:-12536667 Msa0799360:CDS
TATTCTTGAAGAGGTAGAGG+AGG 0.530461 5_3:-12536050 Msa0799360:CDS
TCAGGTCATTGTGGACATGC+GGG 0.534537 5_3:-12533813 Msa0799360:intron
AACTCAATAACCAGAAAAGC+AGG 0.535534 5_3:-12533955 Msa0799360:CDS
ACACGTAAGACCTTCCACTT+TGG 0.540143 5_3:+12536301 None:intergenic
GATTTGGGTGGACATGTTCG+TGG 0.540278 5_3:-12534764 Msa0799360:CDS
GCCTCAACCAGTTCAAATCA+TGG 0.540311 5_3:-12536355 Msa0799360:CDS
CCTATCACCATTAATTTGCG+TGG 0.542199 5_3:-12533708 Msa0799360:CDS
TACCGGAGATTGTTGAGGTA+GGG 0.544284 5_3:+12537869 None:intergenic
GGTAGAGGAGGAAAGACGAA+AGG 0.544326 5_3:-12536038 Msa0799360:CDS
TGAAACAAAAGCAATGAGAG+TGG 0.545369 5_3:-12532983 Msa0799360:CDS
TGGCTTCCCATCTCTTGCCA+TGG 0.545402 5_3:+12534508 None:intergenic
GGCTTTAATATGTCCAGTAT+AGG 0.545948 5_3:+12534446 None:intergenic
ATTCCAGTGACCCTTGAAGT+TGG 0.548185 5_3:-12533740 Msa0799360:CDS
GGAAGTTACATTTATGGCCG+AGG 0.549430 5_3:-12537675 Msa0799360:CDS
ACTATAGGATATTCTTGAAG+AGG 0.550145 5_3:-12536059 Msa0799360:intron
TGCAACATTTCAGGTCATTG+TGG 0.552950 5_3:-12533822 Msa0799360:intron
AGATCAACGATGAGGATTCG+AGG 0.554305 5_3:+12537907 None:intergenic
AAAAGCAGGTGGGAGAAAAG+AGG 0.554566 5_3:-12533941 Msa0799360:CDS
TTTGATGAAGAATATTTGGA+AGG 0.555720 5_3:+12533777 None:intergenic
ACCGGGCCATTGTTTCCACC+TGG 0.558185 5_3:+12533630 None:intergenic
GATAATGAAGACACTGAAGA+AGG 0.559010 5_3:-12536586 Msa0799360:intron
CCTTACAATAAAAGCTTCGG+TGG 0.559015 5_3:+12537810 None:intergenic
CTGATGCCATGGCAAGAGAT+GGG 0.559494 5_3:-12534514 Msa0799360:CDS
TTCAGGTCATTGTGGACATG+CGG 0.559800 5_3:-12533814 Msa0799360:intron
AGTGATGAAACAAACGTGGC+CGG 0.560188 5_3:+12537930 None:intergenic
GTTCTGTGATTATGTGTTCG+TGG 0.560393 5_3:+12538196 None:intergenic
CGTCACTCTCTCTATTCCTC+CGG 0.561209 5_3:-12537949 Msa0799360:CDS
CACATCATCACCAATATCAC+TGG 0.561268 5_3:+12533140 None:intergenic
GAGGAGGAAAGACGAAAGGA+AGG 0.565647 5_3:-12536034 Msa0799360:CDS
AAATTACAACACATCGGCTG+TGG 0.565719 5_3:-12532461 Msa0799360:CDS
GACGACCTGATGTGAAACTC+TGG 0.566044 5_3:+12533660 None:intergenic
GAGACCAGATTATACGTAGC+CGG 0.566434 5_3:+12533067 None:intergenic
GGCCCGGTATTATAAAATAC+CGG 0.566778 5_3:-12533615 Msa0799360:CDS
GGTCGGCGGTGATTTCAGTC+GGG 0.568350 5_3:+12537986 None:intergenic
TATAGGCTGATCACTTTCAA+GGG 0.569642 5_3:+12534463 None:intergenic
GATATAGTCACCAACTTCAA+GGG 0.570342 5_3:+12533730 None:intergenic
AGAGAAGAAGTGTTGGCTGA+AGG 0.570892 5_3:-12536004 Msa0799360:CDS
GATGATGATTCCAATTGACC+AGG 0.572392 5_3:-12534231 Msa0799360:intron
TTCTGTTTGGATATTTGCAG+AGG 0.573410 5_3:-12536728 Msa0799360:CDS
GCATACCTTTCCTGATGCCA+TGG 0.573742 5_3:-12534525 Msa0799360:CDS
TACCGAGGTTCAGAAGTTTG+AGG 0.573827 5_3:-12534309 Msa0799360:CDS
ATACCGGAGATTGTTGAGGT+AGG 0.576613 5_3:+12537868 None:intergenic
GCCATGATTTGAACTGGTTG+AGG 0.578463 5_3:+12536354 None:intergenic
TTACAAAGGTCATGTCTGGA+TGG 0.580235 5_3:+12534405 None:intergenic
GTGGTTAACGGCGAGGTCGG+CGG 0.582058 5_3:+12537972 None:intergenic
TGGTGGCATGTAAAGATGAA+AGG 0.582112 5_3:-12535955 Msa0799360:CDS
ATGGTAAACGACAATTATAG+AGG 0.582858 5_3:+12534424 None:intergenic
TCTTGCCATGGCATCAGGAA+AGG 0.583375 5_3:+12534520 None:intergenic
ACGGTGGTTAACGGCGAGGT+CGG 0.584337 5_3:+12537969 None:intergenic
TCGGGATTTGGTGAATTTGG+GGG 0.586676 5_3:+12538004 None:intergenic
CCGATGACGAAGTATATGGT+GGG 0.586824 5_3:-12537589 Msa0799360:CDS
GGAAGAAGCACCAAAGTGGA+AGG 0.587130 5_3:-12536311 Msa0799360:CDS
GTCCACCCAAATCAGACTGA+GGG 0.588033 5_3:+12534774 None:intergenic
AGAACTTGAAAGGGATCCAC+CGG 0.589481 5_3:-12537632 Msa0799360:CDS
AGCATCTAGAAAGTCTCTAA+GGG 0.590263 5_3:+12532300 None:intergenic
GAAGACGAATAAGGTTGATG+TGG 0.590987 5_3:-12537515 Msa0799360:CDS
AGCACTAGTTTCACCCATGT+GGG 0.591717 5_3:+12534616 None:intergenic
TTGCTTGCCTCACAACAAAG+TGG 0.595258 5_3:+12532270 None:intergenic
TGCTTGCCTCACAACAAAGT+GGG 0.596550 5_3:+12532271 None:intergenic
AGTTTCTGTATTCTGTCCAA+GGG 0.598717 5_3:+12534886 None:intergenic
GTGTGCCTTGTGAAGAAGAG+TGG 0.600486 5_3:+12538091 None:intergenic
TGAGATTGTGAGGAGACAGT+TGG 0.601412 5_3:-12537452 Msa0799360:CDS
TAATATACCGGAGATTGTTG+AGG 0.602651 5_3:+12537864 None:intergenic
AAGGGATCCACCGGATGTGG+TGG 0.603412 5_3:-12537623 Msa0799360:CDS
CAGCACTAGTTTCACCCATG+TGG 0.605173 5_3:+12534615 None:intergenic
AAATATCCCACTTTGTTGTG+AGG 0.605641 5_3:-12532277 Msa0799360:exon
TCCGATGACGAAGTATATGG+TGG 0.605903 5_3:-12537590 Msa0799360:CDS
CCCACCATATACTTCGTCAT+CGG 0.606972 5_3:+12537589 None:intergenic
TTTCTGATCTTAAGACGTTG+AGG 0.607391 5_3:-12537387 Msa0799360:CDS
AGTCGTTTGATGAGATTGTG+AGG 0.607565 5_3:-12537462 Msa0799360:CDS
ACCAGGTGGAAACAATGGCC+CGG 0.608400 5_3:-12533631 Msa0799360:CDS
ATTATAGGGCCATAATGGAT+GGG 0.608748 5_3:-12532402 Msa0799360:CDS
ACGCATCGCGATTAAACGAA+CGG 0.614460 5_3:+12537782 None:intergenic
GAAAACTCAATCAAGAGCAC+CGG 0.619468 5_3:+12533596 None:intergenic
TTTGGATACACTCAGAGTGT+CGG 0.621133 5_3:-12536761 Msa0799360:CDS
GAAACAAAAGCAATGAGAGT+GGG 0.625806 5_3:-12532982 Msa0799360:CDS
ATACAACCAGGTGGAAACAA+TGG 0.625836 5_3:-12533636 Msa0799360:CDS
AACGTGTTTATCATCTTGTG+AGG 0.628573 5_3:-12536675 Msa0799360:CDS
CGATGACGAAGTATATGGTG+GGG 0.628683 5_3:-12537588 Msa0799360:CDS
TGCCTCAAACTTCTGAACCT+CGG 0.633949 5_3:+12534307 None:intergenic
TGGTAAACGACAATTATAGA+GGG 0.634773 5_3:+12534425 None:intergenic
ACCCCTCAGTCTGATTTGGG+TGG 0.635198 5_3:-12534776 Msa0799360:CDS
GATTCAGAAAGCGATTGTTG+AGG 0.636549 5_3:-12537566 Msa0799360:CDS
TCTTGGAAGAAGCACCAAAG+TGG 0.638664 5_3:-12536315 Msa0799360:CDS
AAGAAGCCAAAGGATCCTAA+GGG 0.640306 5_3:-12534941 Msa0799360:CDS
CATGTTGAGAGAAGAAGTGT+TGG 0.640935 5_3:-12536011 Msa0799360:CDS
TGTTCAGAGTAACAATAAGG+AGG 0.640959 5_3:-12534684 Msa0799360:CDS
CTTCGCAAAACCAGAAACCA+TGG 0.646037 5_3:+12537729 None:intergenic
CTAATATCCACCACATCCGG+TGG 0.646959 5_3:+12537616 None:intergenic
ATCAGGTCGTCTATACAACC+AGG 0.647266 5_3:-12533648 Msa0799360:CDS
AAGTGGCAAGTGGTAAAACT+GGG 0.647794 5_3:-12534661 Msa0799360:CDS
CGGAGGAATAGAGAGAGTGA+CGG 0.653257 5_3:+12537950 None:intergenic
TTGTTAAAAGATCAACGATG+AGG 0.653406 5_3:+12537899 None:intergenic
GACCAGATTATACGTAGCCG+GGG 0.655756 5_3:+12533069 None:intergenic
TAGACGATGCAGTTCTTCGG+AGG 0.657142 5_3:-12534547 Msa0799360:CDS
TGATGTGGAGGATTTGACGG+TGG 0.658243 5_3:-12537500 Msa0799360:CDS
AATAAGGAGGAAGTGGCAAG+TGG 0.663909 5_3:-12534671 Msa0799360:CDS
TAATTAGAATCTGTAACACC+AGG 0.663930 5_3:+12532421 None:intergenic
TCAATAACCAGAAAAGCAGG+TGG 0.667123 5_3:-12533952 Msa0799360:CDS
GAGTTTGTGAAACCAAACAC+GGG 0.667217 5_3:-12534580 Msa0799360:CDS
TTTCTATGAAGATTCTACCG+AGG 0.670018 5_3:-12534324 Msa0799360:CDS
GAAGGTGAAGACACCGACAA+TGG 0.670311 5_3:-12535986 Msa0799360:CDS
AAACCAGAAACCATGGCCTG+AGG 0.671825 5_3:+12537736 None:intergenic
GGCTGAAAATTACAACACAT+CGG 0.677724 5_3:-12532467 Msa0799360:CDS
AGAGTTTGTGAAACCAAACA+CGG 0.679375 5_3:-12534581 Msa0799360:CDS
CAATAACCAGAAAAGCAGGT+GGG 0.683805 5_3:-12533951 Msa0799360:CDS
AAGCTAGCTGAAATAATGGG+TGG 0.684063 5_3:-12532340 Msa0799360:CDS
GATGAAACAAACGTGGCCGG+AGG 0.685510 5_3:+12537933 None:intergenic
TGTCCACCCAAATCAGACTG+AGG 0.686132 5_3:+12534773 None:intergenic
CCCGTCAGAAGAAGGAATTG+TGG 0.696840 5_3:-12532956 Msa0799360:CDS
AGGAATAGAGAGAGTGACGG+TGG 0.698504 5_3:+12537953 None:intergenic
TCCACCCAAATCAGACTGAG+GGG 0.701752 5_3:+12534775 None:intergenic
GAACTTCTAGAAGACAACAA+TGG 0.710472 5_3:-12538177 Msa0799360:CDS
ATGCGTGTTTGAAAGAGATG+AGG 0.714587 5_3:-12537537 Msa0799360:CDS
AGTGACGGTGGTTAACGGCG+AGG 0.717877 5_3:+12537965 None:intergenic
CTTCTAGAAGACAACAATGG+CGG 0.720413 5_3:-12538174 Msa0799360:CDS
GAATTGTGGAAAGTGACGTG+AGG 0.720586 5_3:-12532942 Msa0799360:intron
GAAAAGGCAAGAGAAAATTG+GGG 0.723707 5_3:-12534742 Msa0799360:CDS
GGACAGAATACAGAAACTGG+CGG 0.724595 5_3:-12534881 Msa0799360:CDS
AGGTCGTCTATACAACCAGG+TGG 0.725762 5_3:-12533645 Msa0799360:CDS
AGTTTGTGAAACCAAACACG+GGG 0.728405 5_3:-12534579 Msa0799360:CDS
GAGGAGTGATGAAACAAACG+TGG 0.753230 5_3:+12537926 None:intergenic
TTTGTGAAACCAAACACGGG+GGG 0.756170 5_3:-12534577 Msa0799360:CDS
GTTTGTGAAACCAAACACGG+GGG 0.775210 5_3:-12534578 Msa0799360:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGTTTGAATTTGAAAAATTT+AGG + chr5_3:12532190-12532209 None:intergenic 15.0%
!! AAAAAGATATGTTTAATTGA+TGG - chr5_3:12533425-12533444 Msa0799360:intron 15.0%
!! AAAAGATATGTTTAATTGAT+GGG - chr5_3:12533426-12533445 Msa0799360:intron 15.0%
!! AGCATTTAAAAAAATAAAAG+AGG - chr5_3:12533971-12533990 Msa0799360:CDS 15.0%
!!! TAGTTTAATTTGATAAATGT+TGG - chr5_3:12534335-12534354 Msa0799360:CDS 15.0%
!! TTATGTCTTCTTATAAAATA+AGG - chr5_3:12534574-12534593 Msa0799360:CDS 15.0%
!!! TCTTTGAAATATTATAAATC+TGG - chr5_3:12534748-12534767 Msa0799360:CDS 15.0%
!!! CTTTGAAATATTATAAATCT+GGG - chr5_3:12534749-12534768 Msa0799360:CDS 15.0%
!!! TTTGAAATATTATAAATCTG+GGG - chr5_3:12534750-12534769 Msa0799360:CDS 15.0%
!!! TTCTTAGTTTTATATTTCTA+AGG - chr5_3:12537542-12537561 Msa0799360:CDS 15.0%
!!! GAATTTGAAAAATTTAGGTT+TGG + chr5_3:12532185-12532204 None:intergenic 20.0%
!!! TGAATTAGCTTATTGAAAAA+TGG - chr5_3:12533501-12533520 Msa0799360:intron 20.0%
!! CTAACTAAAAAATACATGTT+TGG + chr5_3:12533554-12533573 None:intergenic 20.0%
!! GTCAAAAACAAAAAGAAAAA+AGG - chr5_3:12533834-12533853 Msa0799360:intron 20.0%
!!! AAAAAATAAAAGAGGCATAA+AGG - chr5_3:12533979-12533998 Msa0799360:CDS 20.0%
!!! TATCATCGTTTTATTTGATT+TGG - chr5_3:12534208-12534227 Msa0799360:intron 20.0%
!!! TTGATAAATGTTGGATATTT+TGG - chr5_3:12534344-12534363 Msa0799360:CDS 20.0%
!!! TGATAAATGTTGGATATTTT+GGG - chr5_3:12534345-12534364 Msa0799360:CDS 20.0%
!! TGATTTGATCATATTACTAT+AGG - chr5_3:12534376-12534395 Msa0799360:CDS 20.0%
!!! TAAAAAAAGACAACCTTTTT+TGG + chr5_3:12534557-12534576 None:intergenic 20.0%
!!! CTCTAATTTTATGAAATTTG+TGG - chr5_3:12534990-12535009 Msa0799360:CDS 20.0%
!!! TACTTTTTTTGTGATTATGA+TGG - chr5_3:12535309-12535328 Msa0799360:intron 20.0%
!!! CTATTGTTTTTTTATTGTGA+AGG - chr5_3:12535418-12535437 Msa0799360:intron 20.0%
!! AATCAAAAAGAAAAACATGA+GGG + chr5_3:12536266-12536285 None:intergenic 20.0%
!! AGTATTTAAATCTGAATCTA+GGG + chr5_3:12536469-12536488 None:intergenic 20.0%
!! TAGTATTTAAATCTGAATCT+AGG + chr5_3:12536470-12536489 None:intergenic 20.0%
!! CAAATTAGTACTAAATATCT+GGG - chr5_3:12537044-12537063 Msa0799360:intron 20.0%
!! AACTTTGATATAATGCTATT+GGG + chr5_3:12537339-12537358 None:intergenic 20.0%
!! TGTTACAGATTCTAATTATA+GGG - chr5_3:12538034-12538053 Msa0799360:CDS 20.0%
! TTGGAATTGAAAATTCTTGA+AGG + chr5_3:12532166-12532185 None:intergenic 25.0%
! CATCCATTATTATTCATCAA+TGG - chr5_3:12532221-12532240 Msa0799360:three_prime_UTR 25.0%
! GAACCATTGATGAATAATAA+TGG + chr5_3:12532227-12532246 None:intergenic 25.0%
!!! TTTGAGATGGAAATTGATTT+TGG + chr5_3:12532418-12532437 None:intergenic 25.0%
! AATCCTTACAATAAAAGCTT+CGG + chr5_3:12532646-12532665 None:intergenic 25.0%
! GAGAAAAATCATAAGCTATA+AGG - chr5_3:12533460-12533479 Msa0799360:intron 25.0%
! AACAAAAAGAAAAAAGGCAA+AGG - chr5_3:12533840-12533859 Msa0799360:intron 25.0%
! ACAAAAAGAAAAAAGGCAAA+GGG - chr5_3:12533841-12533860 Msa0799360:intron 25.0%
!! ACTTATCGTTATGTTTTCTT+TGG - chr5_3:12533892-12533911 Msa0799360:intron 25.0%
! AAGCATGCTAAACAAAATTA+AGG + chr5_3:12534055-12534074 None:intergenic 25.0%
!! TTCCTATTCTAGAAAGTATA+TGG - chr5_3:12534183-12534202 Msa0799360:intron 25.0%
!! TTCGTTTGGATTTTCAAAAT+AGG - chr5_3:12534286-12534305 Msa0799360:CDS 25.0%
! TCAAAGTGGAAATAACATAA+TGG - chr5_3:12534953-12534972 Msa0799360:CDS 25.0%
! CAAAGTGGAAATAACATAAT+GGG - chr5_3:12534954-12534973 Msa0799360:CDS 25.0%
! ATTTGTGGATACATATAATC+TGG - chr5_3:12535005-12535024 Msa0799360:CDS 25.0%
!! ACTCATTCGTTCAATTTTAT+TGG - chr5_3:12535095-12535114 Msa0799360:intron 25.0%
!! TATACCTTTAACCTTTTAGA+GGG + chr5_3:12536100-12536119 None:intergenic 25.0%
! GAATCAAAAAGAAAAACATG+AGG + chr5_3:12536267-12536286 None:intergenic 25.0%
!!! CATGTTTTTCTTTTTGATTC+TGG - chr5_3:12536267-12536286 Msa0799360:intron 25.0%
! TGTAAGATGAAAGTTAGTAT+AGG + chr5_3:12536371-12536390 None:intergenic 25.0%
! TTTGATGAAGAATATTTGGA+AGG + chr5_3:12536676-12536695 None:intergenic 25.0%
! TCCAAATATTCTTCATCAAA+AGG - chr5_3:12536676-12536695 Msa0799360:CDS 25.0%
! CCAAATATTCTTCATCAAAA+GGG - chr5_3:12536677-12536696 Msa0799360:CDS 25.0%
! CCAGATATTTAGTACTAATT+TGG + chr5_3:12537046-12537065 None:intergenic 25.0%
! CCAAATTAGTACTAAATATC+TGG - chr5_3:12537043-12537062 Msa0799360:intron 25.0%
! CAACTTTGATATAATGCTAT+TGG + chr5_3:12537340-12537359 None:intergenic 25.0%
! TGAAATATTTGCTTCACTAA+AGG - chr5_3:12537425-12537444 Msa0799360:CDS 25.0%
! ATTGTAATTGCAAGAAACAT+TGG - chr5_3:12537622-12537641 Msa0799360:CDS 25.0%
!!! TGCAGGCTTTATATAATTTT+AGG - chr5_3:12537748-12537767 Msa0799360:CDS 25.0%
!! TCTGTTCCTAATGTAAATTT+TGG - chr5_3:12537940-12537959 Msa0799360:CDS 25.0%
!! CTGTTCCTAATGTAAATTTT+GGG - chr5_3:12537941-12537960 Msa0799360:CDS 25.0%
!! TGTTCCTAATGTAAATTTTG+GGG - chr5_3:12537942-12537961 Msa0799360:CDS 25.0%
! TTAACCCCAAAATTTACATT+AGG + chr5_3:12537949-12537968 None:intergenic 25.0%
! GTGTTACAGATTCTAATTAT+AGG - chr5_3:12538033-12538052 Msa0799360:CDS 25.0%
! TGCATCAATATATCATCATT+GGG - chr5_3:12538265-12538284 Msa0799360:five_prime_UTR 25.0%
! TTGATTTTGGATTTGAGAGT+GGG + chr5_3:12532405-12532424 None:intergenic 30.0%
!! ATTGATTTTGGATTTGAGAG+TGG + chr5_3:12532406-12532425 None:intergenic 30.0%
TTGTTAAAAGATCAACGATG+AGG + chr5_3:12532554-12532573 None:intergenic 30.0%
TGCATTGAGGATTAATATAC+CGG + chr5_3:12532601-12532620 None:intergenic 30.0%
ATCCAATTTGGCATACTTTA+GGG - chr5_3:12533021-12533040 Msa0799360:CDS 30.0%
CTTTGTAGTTCTTTGTATTG+TGG - chr5_3:12533192-12533211 Msa0799360:intron 30.0%
TATAGAGAATTTCGTAGACT+AGG - chr5_3:12533248-12533267 Msa0799360:intron 30.0%
ATAGAGAATTTCGTAGACTA+GGG - chr5_3:12533249-12533268 Msa0799360:intron 30.0%
TGGTGAAAAATAACAGATAG+CGG - chr5_3:12533279-12533298 Msa0799360:intron 30.0%
CTGATTGAATTTGTAGTGTT+TGG - chr5_3:12533359-12533378 Msa0799360:intron 30.0%
GTAGTGTTTGGTAAAATTAG+CGG - chr5_3:12533371-12533390 Msa0799360:intron 30.0%
! AAGATATCAGCTATTGATTG+CGG - chr5_3:12533584-12533603 Msa0799360:CDS 30.0%
TCAGTGCTCATGATAAAAAA+GGG + chr5_3:12533617-12533636 None:intergenic 30.0%
ATCAGTGCTCATGATAAAAA+AGG + chr5_3:12533618-12533637 None:intergenic 30.0%
!!! TTGTGTGGTTTTTTACTGAT+AGG - chr5_3:12533640-12533659 Msa0799360:CDS 30.0%
! TTTTACTGATAGGTATGATG+CGG - chr5_3:12533650-12533669 Msa0799360:CDS 30.0%
GGTGACTTACTTGAAATATT+TGG - chr5_3:12533671-12533690 Msa0799360:CDS 30.0%
CAAAAAGAAAAAAGGCAAAG+GGG - chr5_3:12533842-12533861 Msa0799360:intron 30.0%
! ATAAAAGAGGCATAAAGGAA+AGG - chr5_3:12533984-12534003 Msa0799360:CDS 30.0%
TTCAAATCATGGCATAGTAT+TGG - chr5_3:12534106-12534125 Msa0799360:intron 30.0%
!! AGCCATATACTTTCTAGAAT+AGG + chr5_3:12534188-12534207 None:intergenic 30.0%
!!! TAATGCTTTTCTAGTTCGTT+TGG - chr5_3:12534272-12534291 Msa0799360:CDS 30.0%
ACTATAGGATATTCTTGAAG+AGG - chr5_3:12534391-12534410 Msa0799360:CDS 30.0%
!! ACTGCACTGATTAAATAATC+CGG + chr5_3:12534618-12534637 None:intergenic 30.0%
!! AGAATTCGTTAGGATTAGTT+TGG + chr5_3:12534688-12534707 None:intergenic 30.0%
! TTTTCAGCATAGAATTCGTT+AGG + chr5_3:12534698-12534717 None:intergenic 30.0%
! GATGGCAATTTTGGATAATA+AGG - chr5_3:12534799-12534818 Msa0799360:CDS 30.0%
! TCAATTTTATTGGCAGTGAT+TGG - chr5_3:12535105-12535124 Msa0799360:intron 30.0%
AGAAAATTGGGGAATAGAAA+TGG - chr5_3:12535719-12535738 Msa0799360:intron 30.0%
TAGAGCCATCAATAATGATT+GGG + chr5_3:12535745-12535764 None:intergenic 30.0%
TAGTGTTCAGAGTAACAATA+AGG - chr5_3:12535763-12535782 Msa0799360:intron 30.0%
!!! GTGGGCTTTATTTTTTGAAT+CGG + chr5_3:12535819-12535838 None:intergenic 30.0%
TTCAAAAAATAAAGCCCACA+TGG - chr5_3:12535820-12535839 Msa0799360:intron 30.0%
TCAAAAAATAAAGCCCACAT+GGG - chr5_3:12535821-12535840 Msa0799360:intron 30.0%
TGGTAAACGACAATTATAGA+GGG + chr5_3:12536028-12536047 None:intergenic 30.0%
ATGGTAAACGACAATTATAG+AGG + chr5_3:12536029-12536048 None:intergenic 30.0%
! GTATACCTTTAACCTTTTAG+AGG + chr5_3:12536101-12536120 None:intergenic 30.0%
CAACTATAGTAAAACAAACC+TGG + chr5_3:12536240-12536259 None:intergenic 30.0%
! TTGTTTTCCTCTTTTCTGAT+TGG - chr5_3:12536391-12536410 Msa0799360:intron 30.0%
! TTGCCATGGATTTTATAGTT+TGG - chr5_3:12536601-12536620 Msa0799360:CDS 30.0%
! TGCCATGGATTTTATAGTTT+GGG - chr5_3:12536602-12536621 Msa0799360:CDS 30.0%
TTCCCAAACTATAAAATCCA+TGG + chr5_3:12536607-12536626 None:intergenic 30.0%
! CCCTTTTGATGAAGAATATT+TGG + chr5_3:12536680-12536699 None:intergenic 30.0%
! TACTGTCTTGTTACTATCAA+TGG - chr5_3:12536938-12536957 Msa0799360:intron 30.0%
AATTTGGACCAAAACAGTAA+CGG + chr5_3:12537030-12537049 None:intergenic 30.0%
CAAACAAGCTATATCATACA+TGG - chr5_3:12537199-12537218 Msa0799360:intron 30.0%
!!! CTTGATTAGCATTTGTTTTG+TGG - chr5_3:12537241-12537260 Msa0799360:intron 30.0%
!! CAACAAATATTGATTTGTGC+AGG - chr5_3:12537731-12537750 Msa0799360:CDS 30.0%
GAAATATTCTTGTTGAGACA+TGG + chr5_3:12537798-12537817 None:intergenic 30.0%
TAATTAGAATCTGTAACACC+AGG + chr5_3:12538032-12538051 None:intergenic 30.0%
TTCTAATTATAGGGCCATAA+TGG - chr5_3:12538043-12538062 Msa0799360:CDS 30.0%
AGAAAAGCTAGCTGAAATAA+TGG - chr5_3:12538106-12538125 Msa0799360:CDS 30.0%
GAAAAGCTAGCTGAAATAAT+GGG - chr5_3:12538107-12538126 Msa0799360:CDS 30.0%
AGACAATTCATTTGTCGAAA+TGG - chr5_3:12538202-12538221 Msa0799360:CDS 30.0%
CTGCATCAATATATCATCAT+TGG - chr5_3:12538264-12538283 Msa0799360:five_prime_UTR 30.0%
! GAACTTCTAGAAGACAACAA+TGG - chr5_3:12532273-12532292 Msa0799360:exon 35.0%
!! AGAGGAGATGAGTTTTGATA+AGG + chr5_3:12532328-12532347 None:intergenic 35.0%
TAATATACCGGAGATTGTTG+AGG + chr5_3:12532589-12532608 None:intergenic 35.0%
GGTTACGGAAGTTACATTTA+TGG - chr5_3:12532769-12532788 Msa0799360:intron 35.0%
GATCCAATTTGGCATACTTT+AGG - chr5_3:12533020-12533039 Msa0799360:CDS 35.0%
TTCCCTAAAGTATGCCAAAT+TGG + chr5_3:12533026-12533045 None:intergenic 35.0%
TTTCTGATCTTAAGACGTTG+AGG - chr5_3:12533063-12533082 Msa0799360:CDS 35.0%
AGTTGTTGGATTATCTAGTC+AGG - chr5_3:12533087-12533106 Msa0799360:CDS 35.0%
!!! CTCATCGATGTTTTAACTTG+CGG - chr5_3:12533154-12533173 Msa0799360:intron 35.0%
CTTTGTATTGTGGAGAATCA+CGG - chr5_3:12533202-12533221 Msa0799360:intron 35.0%
TTATGGCAGATAGCTTATAG+CGG - chr5_3:12533327-12533346 Msa0799360:intron 35.0%
ATAAGCTCGTGAGAAAATGA+CGG - chr5_3:12533525-12533544 Msa0799360:intron 35.0%
TTCTGTTTGGATATTTGCAG+AGG - chr5_3:12533722-12533741 Msa0799360:CDS 35.0%
AACGTGTTTATCATCTTGTG+AGG - chr5_3:12533775-12533794 Msa0799360:CDS 35.0%
GATAATGAAGACACTGAAGA+AGG - chr5_3:12533864-12533883 Msa0799360:intron 35.0%
! TTGGTTCTTTAATCTCGCAT+AGG - chr5_3:12533911-12533930 Msa0799360:intron 35.0%
!! TTTTGTTTAGCATGCTTGTG+TGG - chr5_3:12534058-12534077 Msa0799360:intron 35.0%
TACTATGCCATGATTTGAAC+TGG + chr5_3:12534105-12534124 None:intergenic 35.0%
! CATAGTATTGGAAGAAGTCT+TGG - chr5_3:12534118-12534137 Msa0799360:intron 35.0%
ATGCAAGACAGACACTAATT+TGG - chr5_3:12534232-12534251 Msa0799360:CDS 35.0%
! GTGCAGTAGTCAATTTTGTA+TGG - chr5_3:12534631-12534650 Msa0799360:CDS 35.0%
! AAATCTGGGGCAAGATATTA+TGG - chr5_3:12534763-12534782 Msa0799360:CDS 35.0%
TATGGAATATGCATCGTTGA+TGG - chr5_3:12534781-12534800 Msa0799360:CDS 35.0%
! GTATTTTTCCTGTGAGCTTT+TGG - chr5_3:12534870-12534889 Msa0799360:CDS 35.0%
CTGATATGTGATGATTACCA+TGG - chr5_3:12534923-12534942 Msa0799360:CDS 35.0%
ACCATGGATTCTATTCAAAG+TGG - chr5_3:12534939-12534958 Msa0799360:CDS 35.0%
TCCACTTTGAATAGAATCCA+TGG + chr5_3:12534943-12534962 None:intergenic 35.0%
AGCAGTGATTGACTGAATAT+TGG - chr5_3:12535070-12535089 Msa0799360:intron 35.0%
TGACTGTAGTCTATAGCAAA+AGG - chr5_3:12535142-12535161 Msa0799360:intron 35.0%
TATCAACCAGCAAAAACTCA+AGG + chr5_3:12535354-12535373 None:intergenic 35.0%
TGAAGGTCATTCAAGATGAA+TGG - chr5_3:12535435-12535454 Msa0799360:intron 35.0%
GCATAAGAAAAAGAAGCCAA+AGG - chr5_3:12535499-12535518 Msa0799360:intron 35.0%
TTAAGAATCCCAAAACCCTT+AGG + chr5_3:12535527-12535546 None:intergenic 35.0%
!!! AAGGGTTTTGGGATTCTTAA+TGG - chr5_3:12535527-12535546 Msa0799360:intron 35.0%
AGTTTCTGTATTCTGTCCAA+GGG + chr5_3:12535567-12535586 None:intergenic 35.0%
TGGAAAAGGCAAGAGAAAAT+TGG - chr5_3:12535706-12535725 Msa0799360:intron 35.0%
GGAAAAGGCAAGAGAAAATT+GGG - chr5_3:12535707-12535726 Msa0799360:intron 35.0%
GAAAAGGCAAGAGAAAATTG+GGG - chr5_3:12535708-12535727 Msa0799360:intron 35.0%
AATGGCCCAATCATTATTGA+TGG - chr5_3:12535737-12535756 Msa0799360:intron 35.0%
CTAGAGCCATCAATAATGAT+TGG + chr5_3:12535746-12535765 None:intergenic 35.0%
TGTTCAGAGTAACAATAAGG+AGG - chr5_3:12535766-12535785 Msa0799360:intron 35.0%
AGAGTTTGTGAAACCAAACA+CGG - chr5_3:12535869-12535888 Msa0799360:intron 35.0%
! TAAAAATGTACTGGTGGTAG+TGG + chr5_3:12535965-12535984 None:intergenic 35.0%
! TCAAGGGCATAAAAATGTAC+TGG + chr5_3:12535974-12535993 None:intergenic 35.0%
TATAGGCTGATCACTTTCAA+GGG + chr5_3:12535990-12536009 None:intergenic 35.0%
! GGCTTTAATATGTCCAGTAT+AGG + chr5_3:12536007-12536026 None:intergenic 35.0%
GACTTCGATTTCTCTTACAA+AGG + chr5_3:12536062-12536081 None:intergenic 35.0%
! GAATCCCTCTAAAAGGTTAA+AGG - chr5_3:12536093-12536112 Msa0799360:intron 35.0%
GTAAAACAAACCTGGTCAAT+TGG + chr5_3:12536232-12536251 None:intergenic 35.0%
CCATTATCCACATTCCTATA+CGG + chr5_3:12536331-12536350 None:intergenic 35.0%
CGTATAGGAATGTGGATAAT+GGG - chr5_3:12536329-12536348 Msa0799360:CDS 35.0%
!! AAAAGCACCAATCAGAAAAG+AGG + chr5_3:12536401-12536420 None:intergenic 35.0%
!!! CTTTTCTGGTTATTGAGTTC+TGG + chr5_3:12536494-12536513 None:intergenic 35.0%
AACTCAATAACCAGAAAAGC+AGG - chr5_3:12536495-12536514 Msa0799360:intron 35.0%
AGAGGATGATAAAGAAATGC+AGG - chr5_3:12536527-12536546 Msa0799360:intron 35.0%
AAATCCATGGCAAGTATATG+AGG + chr5_3:12536594-12536613 None:intergenic 35.0%
TTTGGGAATTGCAACATTTC+AGG - chr5_3:12536619-12536638 Msa0799360:CDS 35.0%
GATATAGTCACCAACTTCAA+GGG + chr5_3:12536723-12536742 None:intergenic 35.0%
TTCCTTTCCACGCAAATTAA+TGG + chr5_3:12536752-12536771 None:intergenic 35.0%
! CACCGGTATTTTATAATACC+GGG + chr5_3:12536840-12536859 None:intergenic 35.0%
!! GCACCGGTATTTTATAATAC+CGG + chr5_3:12536841-12536860 None:intergenic 35.0%
!! TCAATGGCTTGTTCATATTC+TGG - chr5_3:12536954-12536973 Msa0799360:intron 35.0%
!! CAATGGCTTGTTCATATTCT+GGG - chr5_3:12536955-12536974 Msa0799360:intron 35.0%
!! AATGGCTTGTTCATATTCTG+GGG - chr5_3:12536956-12536975 Msa0799360:intron 35.0%
CGGCAAGCATTCTTATAAAT+GGG + chr5_3:12537010-12537029 None:intergenic 35.0%
ACGGCAAGCATTCTTATAAA+TGG + chr5_3:12537011-12537030 None:intergenic 35.0%
GAATGACATTTGATCTGTCA+TGG - chr5_3:12537270-12537289 Msa0799360:intron 35.0%
!! CTCATTGCTTTTGTTTCATC+TGG + chr5_3:12537465-12537484 None:intergenic 35.0%
TGAAACAAAAGCAATGAGAG+TGG - chr5_3:12537467-12537486 Msa0799360:CDS 35.0%
GAAACAAAAGCAATGAGAGT+GGG - chr5_3:12537468-12537487 Msa0799360:CDS 35.0%
!! TTCACTTTTCATTTCACCCT+TGG + chr5_3:12537581-12537600 None:intergenic 35.0%
GTAATTGCAAGAAACATTGG+TGG - chr5_3:12537625-12537644 Msa0799360:CDS 35.0%
!! CCAACATGGCTTTAAAACTA+TGG + chr5_3:12537661-12537680 None:intergenic 35.0%
!!! CCATAGTTTTAAAGCCATGT+TGG - chr5_3:12537658-12537677 Msa0799360:CDS 35.0%
TTTCCATGCTCATGTGATAT+AGG - chr5_3:12537692-12537711 Msa0799360:CDS 35.0%
TGAAACCTGTGCATATTGAT+AGG + chr5_3:12537825-12537844 None:intergenic 35.0%
ACATTTAAACTGTAGAGCTC+AGG - chr5_3:12537860-12537879 Msa0799360:CDS 35.0%
GGCTGAAAATTACAACACAT+CGG - chr5_3:12537983-12538002 Msa0799360:CDS 35.0%
! AATTATAGGGCCATAATGGA+TGG - chr5_3:12538047-12538066 Msa0799360:CDS 35.0%
!! ATTATAGGGCCATAATGGAT+GGG - chr5_3:12538048-12538067 Msa0799360:CDS 35.0%
! ACTTTTACACCCATCCATTA+TGG + chr5_3:12538060-12538079 None:intergenic 35.0%
AATGGATGGGTGTAAAAGTT+TGG - chr5_3:12538061-12538080 Msa0799360:CDS 35.0%
!!! ATTTCAGCTAGCTTTTCTAC+TGG + chr5_3:12538104-12538123 None:intergenic 35.0%
AGCATCTAGAAAGTCTCTAA+GGG + chr5_3:12538153-12538172 None:intergenic 35.0%
TAGCATCTAGAAAGTCTCTA+AGG + chr5_3:12538154-12538173 None:intergenic 35.0%
! AAATATCCCACTTTGTTGTG+AGG - chr5_3:12538173-12538192 Msa0799360:CDS 35.0%
GTTCTGTGATTATGTGTTCG+TGG + chr5_3:12532257-12532276 None:intergenic 40.0%
! CTTCTAGAAGACAACAATGG+CGG - chr5_3:12532276-12532295 Msa0799360:exon 40.0%
TTGGTGAATTTGGGGGTTTA+GGG + chr5_3:12532442-12532461 None:intergenic 40.0%
TTTGGTGAATTTGGGGGTTT+AGG + chr5_3:12532443-12532462 None:intergenic 40.0%
!! AGTCGGGATTTGGTGAATTT+GGG + chr5_3:12532451-12532470 None:intergenic 40.0%
CGGAAATTGAATGTGCATTG+AGG + chr5_3:12532614-12532633 None:intergenic 40.0%
AAAAGCTTCGGTGGAAGTTT+CGG + chr5_3:12532634-12532653 None:intergenic 40.0%
CCTTACAATAAAAGCTTCGG+TGG + chr5_3:12532643-12532662 None:intergenic 40.0%
! CCACCGAAGCTTTTATTGTA+AGG - chr5_3:12532640-12532659 Msa0799360:intron 40.0%
! AGAGGACGATGAAGTGTTTA+GGG - chr5_3:12532748-12532767 Msa0799360:intron 40.0%
! CGATGAAGTGTTTAGGGTTA+CGG - chr5_3:12532754-12532773 Msa0799360:intron 40.0%
ACGTGAGTCAAGAACTTGAA+AGG - chr5_3:12532808-12532827 Msa0799360:intron 40.0%
CGTGAGTCAAGAACTTGAAA+GGG - chr5_3:12532809-12532828 Msa0799360:intron 40.0%
GATTCAGAAAGCGATTGTTG+AGG - chr5_3:12532884-12532903 Msa0799360:intron 40.0%
GAAAGCGATTGTTGAGGTTA+TGG - chr5_3:12532890-12532909 Msa0799360:intron 40.0%
ATGCGTGTTTGAAAGAGATG+AGG - chr5_3:12532913-12532932 Msa0799360:intron 40.0%
AGAGATGAGGAAGACGAATA+AGG - chr5_3:12532926-12532945 Msa0799360:intron 40.0%
!! GAAGACGAATAAGGTTGATG+TGG - chr5_3:12532935-12532954 Msa0799360:intron 40.0%
AGTCGTTTGATGAGATTGTG+AGG - chr5_3:12532988-12533007 Msa0799360:CDS 40.0%
TAAGACGTTGAGGAAGTTGT+TGG - chr5_3:12533073-12533092 Msa0799360:CDS 40.0%
GCTTATAGCAGACGAACTTA+TGG - chr5_3:12533310-12533329 Msa0799360:intron 40.0%
TTTGGATACACTCAGAGTGT+CGG - chr5_3:12533689-12533708 Msa0799360:CDS 40.0%
TATCATCTTGTGAGGTCAGA+TGG - chr5_3:12533783-12533802 Msa0799360:CDS 40.0%
! CTCGCATAGGTTGTGATTTT+TGG - chr5_3:12533924-12533943 Msa0799360:CDS 40.0%
CAAAATAGGATGACCTGAAG+CGG - chr5_3:12534300-12534319 Msa0799360:CDS 40.0%
AAAATAGGATGACCTGAAGC+GGG - chr5_3:12534301-12534320 Msa0799360:CDS 40.0%
! ATTTTTCCATAACCCGCTTC+AGG + chr5_3:12534316-12534335 None:intergenic 40.0%
GGATATTCTTGAAGAGGTAG+AGG - chr5_3:12534397-12534416 Msa0799360:CDS 40.0%
TATTCTTGAAGAGGTAGAGG+AGG - chr5_3:12534400-12534419 Msa0799360:CDS 40.0%
! CATGTTGAGAGAAGAAGTGT+TGG - chr5_3:12534439-12534458 Msa0799360:CDS 40.0%
CACCAATACAATGCCATTGT+CGG + chr5_3:12534480-12534499 None:intergenic 40.0%
TGGTGGCATGTAAAGATGAA+AGG - chr5_3:12534495-12534514 Msa0799360:CDS 40.0%
CATCACCAACAGTCCAAAAA+AGG - chr5_3:12534541-12534560 Msa0799360:CDS 40.0%
!!! GACAACCTTTTTTGGACTGT+TGG + chr5_3:12534549-12534568 None:intergenic 40.0%
GTGTGATCTGAGTGTAATTC+CGG - chr5_3:12534596-12534615 Msa0799360:CDS 40.0%
!!! TGCATCGTTGATGGCAATTT+TGG - chr5_3:12534790-12534809 Msa0799360:CDS 40.0%
AAACGATACCAAAAGCTCAC+AGG + chr5_3:12534881-12534900 None:intergenic 40.0%
! TGATGGAAGTGTGCTATTCT+TGG - chr5_3:12535326-12535345 Msa0799360:intron 40.0%
! TTGGTTCCTTGAGTTTTTGC+TGG - chr5_3:12535345-12535364 Msa0799360:intron 40.0%
AAAGAAGCCAAAGGATCCTA+AGG - chr5_3:12535508-12535527 Msa0799360:intron 40.0%
AAGAAGCCAAAGGATCCTAA+GGG - chr5_3:12535509-12535528 Msa0799360:intron 40.0%
! CAAAGGATCCTAAGGGTTTT+GGG - chr5_3:12535516-12535535 Msa0799360:intron 40.0%
GTATTCTGTCCAAGGGATAT+GGG + chr5_3:12535560-12535579 None:intergenic 40.0%
TGTATTCTGTCCAAGGGATA+TGG + chr5_3:12535561-12535580 None:intergenic 40.0%
CAGTTTCTGTATTCTGTCCA+AGG + chr5_3:12535568-12535587 None:intergenic 40.0%
CTTGGACAGAATACAGAAAC+TGG - chr5_3:12535566-12535585 Msa0799360:intron 40.0%
GAGTAACAATAAGGAGGAAG+TGG - chr5_3:12535772-12535791 Msa0799360:intron 40.0%
AAGTGGCAAGTGGTAAAACT+GGG - chr5_3:12535789-12535808 Msa0799360:intron 40.0%
GAGTTTGTGAAACCAAACAC+GGG - chr5_3:12535870-12535889 Msa0799360:intron 40.0%
AGTTTGTGAAACCAAACACG+GGG - chr5_3:12535871-12535890 Msa0799360:intron 40.0%
AGGGCATAAAAATGTACTGG+TGG + chr5_3:12535971-12535990 None:intergenic 40.0%
GTATAGGCTGATCACTTTCA+AGG + chr5_3:12535991-12536010 None:intergenic 40.0%
TGAAAGTGATCAGCCTATAC+TGG - chr5_3:12535991-12536010 Msa0799360:CDS 40.0%
TTACAAAGGTCATGTCTGGA+TGG + chr5_3:12536048-12536067 None:intergenic 40.0%
TCTCTTACAAAGGTCATGTC+TGG + chr5_3:12536052-12536071 None:intergenic 40.0%
AAGCTGAGAATCCCTCTAAA+AGG - chr5_3:12536086-12536105 Msa0799360:intron 40.0%
GCAAGTATACGTAGAGAGAA+TGG - chr5_3:12536163-12536182 Msa0799360:intron 40.0%
GATGATGATTCCAATTGACC+AGG - chr5_3:12536219-12536238 Msa0799360:intron 40.0%
! TTTGATTCTGGTTGCTGCTT+CGG - chr5_3:12536279-12536298 Msa0799360:intron 40.0%
TATCCACATTCCTATACGGA+AGG + chr5_3:12536327-12536346 None:intergenic 40.0%
CCGTATAGGAATGTGGATAA+TGG - chr5_3:12536328-12536347 Msa0799360:CDS 40.0%
TCAATAACCAGAAAAGCAGG+TGG - chr5_3:12536498-12536517 Msa0799360:intron 40.0%
CAATAACCAGAAAAGCAGGT+GGG - chr5_3:12536499-12536518 Msa0799360:intron 40.0%
TATGCCTCATATACTTGCCA+TGG - chr5_3:12536587-12536606 Msa0799360:CDS 40.0%
! TGCAACATTTCAGGTCATTG+TGG - chr5_3:12536628-12536647 Msa0799360:CDS 40.0%
GGATATAGTCACCAACTTCA+AGG + chr5_3:12536724-12536743 None:intergenic 40.0%
CCACGCAAATTAATGGTGAT+AGG + chr5_3:12536745-12536764 None:intergenic 40.0%
!! CCTATCACCATTAATTTGCG+TGG - chr5_3:12536742-12536761 Msa0799360:CDS 40.0%
!! CACCATTAATTTGCGTGGAA+AGG - chr5_3:12536747-12536766 Msa0799360:CDS 40.0%
!! CGTGGAAAGGAAAAGTATTC+AGG - chr5_3:12536760-12536779 Msa0799360:CDS 40.0%
ATACAACCAGGTGGAAACAA+TGG - chr5_3:12536814-12536833 Msa0799360:intron 40.0%
GGCCCGGTATTATAAAATAC+CGG - chr5_3:12536835-12536854 Msa0799360:intron 40.0%
! GAAAACTCAATCAAGAGCAC+CGG + chr5_3:12536857-12536876 None:intergenic 40.0%
! GCTCTTGATTGAGTTTTCAC+AGG - chr5_3:12536859-12536878 Msa0799360:intron 40.0%
GGATAAGAGCTTCTCATTTC+AGG - chr5_3:12536880-12536899 Msa0799360:intron 40.0%
!! ATGGCTTGTTCATATTCTGG+GGG - chr5_3:12536957-12536976 Msa0799360:intron 40.0%
! AATGCTTGCCGTTACTGTTT+TGG - chr5_3:12537019-12537038 Msa0799360:intron 40.0%
AGTACTAAATATCTGGGCAC+TGG - chr5_3:12537050-12537069 Msa0799360:intron 40.0%
GTACTAAATATCTGGGCACT+GGG - chr5_3:12537051-12537070 Msa0799360:intron 40.0%
CACATCATCACCAATATCAC+TGG + chr5_3:12537313-12537332 None:intergenic 40.0%
! TACTTGCTCTACATTTTCCC+CGG - chr5_3:12537364-12537383 Msa0799360:CDS 40.0%
TCCACAATTCCTTCTTCTGA+CGG + chr5_3:12537498-12537517 None:intergenic 40.0%
TATCACATGAGCATGGAAAC+AGG + chr5_3:12537691-12537710 None:intergenic 40.0%
AAGCCTATATCACATGAGCA+TGG + chr5_3:12537698-12537717 None:intergenic 40.0%
! AAATTACAACACATCGGCTG+TGG - chr5_3:12537989-12538008 Msa0799360:CDS 40.0%
! AAGCTAGCTGAAATAATGGG+TGG - chr5_3:12538110-12538129 Msa0799360:CDS 40.0%
GGACTCACAATTCTCTCATC+AGG - chr5_3:12532297-12532316 Msa0799360:CDS 45.0%
AGAGTGGAGAAGAAGAAGAG+AGG + chr5_3:12532346-12532365 None:intergenic 45.0%
CTTCTCCACTCTTCTTCACA+AGG - chr5_3:12532354-12532373 Msa0799360:CDS 45.0%
TTGGATTTGAGAGTGGGAGA+AGG + chr5_3:12532399-12532418 None:intergenic 45.0%
!! TCGGGATTTGGTGAATTTGG+GGG + chr5_3:12532449-12532468 None:intergenic 45.0%
!! GTCGGGATTTGGTGAATTTG+GGG + chr5_3:12532450-12532469 None:intergenic 45.0%
!! CAGTCGGGATTTGGTGAATT+TGG + chr5_3:12532452-12532471 None:intergenic 45.0%
AGTGATGAAACAAACGTGGC+CGG + chr5_3:12532523-12532542 None:intergenic 45.0%
GAGGAGTGATGAAACAAACG+TGG + chr5_3:12532527-12532546 None:intergenic 45.0%
AGATCAACGATGAGGATTCG+AGG + chr5_3:12532546-12532565 None:intergenic 45.0%
TACCGGAGATTGTTGAGGTA+GGG + chr5_3:12532584-12532603 None:intergenic 45.0%
ATACCGGAGATTGTTGAGGT+AGG + chr5_3:12532585-12532604 None:intergenic 45.0%
ACGCATCGCGATTAAACGAA+CGG + chr5_3:12532671-12532690 None:intergenic 45.0%
! AGCATTTTCTGATCGTCCTC+AGG - chr5_3:12532698-12532717 Msa0799360:intron 45.0%
CTTCGCAAAACCAGAAACCA+TGG + chr5_3:12532724-12532743 None:intergenic 45.0%
!!! CATGGTTTCTGGTTTTGCGA+AGG - chr5_3:12532722-12532741 Msa0799360:intron 45.0%
! GAGAGGACGATGAAGTGTTT+AGG - chr5_3:12532747-12532766 Msa0799360:intron 45.0%
GGAAGTTACATTTATGGCCG+AGG - chr5_3:12532775-12532794 Msa0799360:intron 45.0%
ACATTTATGGCCGAGGTTTC+AGG - chr5_3:12532782-12532801 Msa0799360:intron 45.0%
CTCACGTAAACCTGAAACCT+CGG + chr5_3:12532795-12532814 None:intergenic 45.0%
AGAACTTGAAAGGGATCCAC+CGG - chr5_3:12532818-12532837 Msa0799360:intron 45.0%
!! ACCGGATGTGGTGGATATTA+GGG - chr5_3:12532836-12532855 Msa0799360:intron 45.0%
ACCCTAATATCCACCACATC+CGG + chr5_3:12532840-12532859 None:intergenic 45.0%
GGTTCCGATGACGAAGTATA+TGG - chr5_3:12532857-12532876 Msa0799360:intron 45.0%
TCCGATGACGAAGTATATGG+TGG - chr5_3:12532860-12532879 Msa0799360:intron 45.0%
CCCACCATATACTTCGTCAT+CGG + chr5_3:12532864-12532883 None:intergenic 45.0%
CCGATGACGAAGTATATGGT+GGG - chr5_3:12532861-12532880 Msa0799360:intron 45.0%
CGATGACGAAGTATATGGTG+GGG - chr5_3:12532862-12532881 Msa0799360:intron 45.0%
!! GACGAATAAGGTTGATGTGG+AGG - chr5_3:12532938-12532957 Msa0799360:intron 45.0%
! GGTTGATGTGGAGGATTTGA+CGG - chr5_3:12532947-12532966 Msa0799360:CDS 45.0%
AGGATTTGACGGTGGAGAAT+GGG - chr5_3:12532958-12532977 Msa0799360:CDS 45.0%
TGAGATTGTGAGGAGACAGT+TGG - chr5_3:12532998-12533017 Msa0799360:CDS 45.0%
GGAGACAGTTGGATCCAATT+TGG - chr5_3:12533009-12533028 Msa0799360:CDS 45.0%
TGGAGAATCACGGTGAAATG+TGG - chr5_3:12533212-12533231 Msa0799360:intron 45.0%
!! CATGAGCACTGATTGTTGTG+TGG - chr5_3:12533625-12533644 Msa0799360:CDS 45.0%
! CGGAGAGTTTTCGTTCTGTT+TGG - chr5_3:12533709-12533728 Msa0799360:CDS 45.0%
AACAAATGCAGTCCACAGCT+TGG + chr5_3:12534022-12534041 None:intergenic 45.0%
GCCTCAACCAGTTCAAATCA+TGG - chr5_3:12534095-12534114 Msa0799360:intron 45.0%
GCCATGATTTGAACTGGTTG+AGG + chr5_3:12534099-12534118 None:intergenic 45.0%
!! TCTTGGAAGAAGCACCAAAG+TGG - chr5_3:12534135-12534154 Msa0799360:intron 45.0%
ACACGTAAGACCTTCCACTT+TGG + chr5_3:12534152-12534171 None:intergenic 45.0%
!! AGAGAAGAAGTGTTGGCTGA+AGG - chr5_3:12534446-12534465 Msa0799360:CDS 45.0%
CACCGACAATGGCATTGTAT+TGG - chr5_3:12534475-12534494 Msa0799360:CDS 45.0%
CGACAATGGCATTGTATTGG+TGG - chr5_3:12534478-12534497 Msa0799360:CDS 45.0%
CAGTCAATCACTGCTACAGA+TGG + chr5_3:12535065-12535084 None:intergenic 45.0%
CCAAAACCCTTAGGATCCTT+TGG + chr5_3:12535518-12535537 None:intergenic 45.0%
! CCAAAGGATCCTAAGGGTTT+TGG - chr5_3:12535515-12535534 Msa0799360:intron 45.0%
GGACAGAATACAGAAACTGG+CGG - chr5_3:12535569-12535588 Msa0799360:intron 45.0%
AGATACCCCTCAGTCTGATT+TGG - chr5_3:12535670-12535689 Msa0799360:intron 45.0%
GATACCCCTCAGTCTGATTT+GGG - chr5_3:12535671-12535690 Msa0799360:intron 45.0%
AATAAGGAGGAAGTGGCAAG+TGG - chr5_3:12535779-12535798 Msa0799360:intron 45.0%
GAAGTGGCAAGTGGTAAAAC+TGG - chr5_3:12535788-12535807 Msa0799360:intron 45.0%
! AGCACTAGTTTCACCCATGT+GGG + chr5_3:12535837-12535856 None:intergenic 45.0%
GTTTGTGAAACCAAACACGG+GGG - chr5_3:12535872-12535891 Msa0799360:intron 45.0%
TTTGTGAAACCAAACACGGG+GGG - chr5_3:12535873-12535892 Msa0799360:intron 45.0%
CTGTAGACGATGCAGTTCTT+CGG - chr5_3:12535900-12535919 Msa0799360:intron 45.0%
TACCGAGGTTCAGAAGTTTG+AGG - chr5_3:12536141-12536160 Msa0799360:intron 45.0%
TGCCTCAAACTTCTGAACCT+CGG + chr5_3:12536146-12536165 None:intergenic 45.0%
!! TCGGTCCATTGTTCTGGAAA+TGG - chr5_3:12536298-12536317 Msa0799360:intron 45.0%
!! AGGAATGTGGATAATGGGCA+TGG - chr5_3:12536334-12536353 Msa0799360:CDS 45.0%
! TGTCCTGCTGTTTATCAGAG+TGG - chr5_3:12536420-12536439 Msa0799360:intron 45.0%
! GTCCTGCTGTTTATCAGAGT+GGG - chr5_3:12536421-12536440 Msa0799360:intron 45.0%
TATCAGAGTGGGCATGGTTT+AGG - chr5_3:12536432-12536451 Msa0799360:intron 45.0%
!! TTTTCTCCCACCTGCTTTTC+TGG + chr5_3:12536508-12536527 None:intergenic 45.0%
AAAAGCAGGTGGGAGAAAAG+AGG - chr5_3:12536509-12536528 Msa0799360:intron 45.0%
TTCAGGTCATTGTGGACATG+CGG - chr5_3:12536636-12536655 Msa0799360:CDS 45.0%
ATTCCAGTGACCCTTGAAGT+TGG - chr5_3:12536710-12536729 Msa0799360:CDS 45.0%
CTCTTCCAGAGTTTCACATC+AGG - chr5_3:12536785-12536804 Msa0799360:CDS 45.0%
ATCAGGTCGTCTATACAACC+AGG - chr5_3:12536802-12536821 Msa0799360:intron 45.0%
! CTTGTTCATATTCTGGGGGT+GGG - chr5_3:12536961-12536980 Msa0799360:intron 45.0%
TACCAGTCTGCCAGTGATAT+TGG - chr5_3:12537300-12537319 Msa0799360:intron 45.0%
AGACCAGATTATACGTAGCC+GGG + chr5_3:12537385-12537404 None:intergenic 45.0%
GAGACCAGATTATACGTAGC+CGG + chr5_3:12537386-12537405 None:intergenic 45.0%
CCACAATTCCTTCTTCTGAC+GGG + chr5_3:12537497-12537516 None:intergenic 45.0%
GAATTGTGGAAAGTGACGTG+AGG - chr5_3:12537508-12537527 Msa0799360:CDS 45.0%
AAACAGGAGATGCACCAACA+TGG + chr5_3:12537675-12537694 None:intergenic 45.0%
CCTGTGCATATTGATAGGCA+AGG + chr5_3:12537820-12537839 None:intergenic 45.0%
CCTTGCCTATCAATATGCAC+AGG - chr5_3:12537817-12537836 Msa0799360:CDS 45.0%
AACTGTAGAGCTCAGGATGT+TGG - chr5_3:12537867-12537886 Msa0799360:CDS 45.0%
GGGTTAATGCTGTGATCACA+GGG - chr5_3:12537962-12537981 Msa0799360:CDS 45.0%
!! GAGTTTCTAAGACGACTTCC+TGG - chr5_3:12538011-12538030 Msa0799360:CDS 45.0%
TGCTTGCCTCACAACAAAGT+GGG + chr5_3:12538182-12538201 None:intergenic 45.0%
TTGCTTGCCTCACAACAAAG+TGG + chr5_3:12538183-12538202 None:intergenic 45.0%
GTGTGCCTTGTGAAGAAGAG+TGG + chr5_3:12532362-12532381 None:intergenic 50.0%
!!! GGGGGTTTAGGGTTTTGAGA+TGG + chr5_3:12532431-12532450 None:intergenic 50.0%
CGGTGATTTCAGTCGGGATT+TGG + chr5_3:12532461-12532480 None:intergenic 50.0%
GAGAGAGTGACGGTGGTTAA+CGG + chr5_3:12532493-12532512 None:intergenic 50.0%
AGGAATAGAGAGAGTGACGG+TGG + chr5_3:12532500-12532519 None:intergenic 50.0%
CGGAGGAATAGAGAGAGTGA+CGG + chr5_3:12532503-12532522 None:intergenic 50.0%
CGTCACTCTCTCTATTCCTC+CGG - chr5_3:12532501-12532520 Msa0799360:intron 50.0%
CTCCCTACCTCAACAATCTC+CGG - chr5_3:12532579-12532598 Msa0799360:intron 50.0%
AAACCAGAAACCATGGCCTG+AGG + chr5_3:12532717-12532736 None:intergenic 50.0%
!!! GGTTTCTGGTTTTGCGAAGG+CGG - chr5_3:12532725-12532744 Msa0799360:intron 50.0%
CTAATATCCACCACATCCGG+TGG + chr5_3:12532837-12532856 None:intergenic 50.0%
!! CACCGGATGTGGTGGATATT+AGG - chr5_3:12532835-12532854 Msa0799360:intron 50.0%
TGATGTGGAGGATTTGACGG+TGG - chr5_3:12532950-12532969 Msa0799360:CDS 50.0%
GAGGATTTGACGGTGGAGAA+TGG - chr5_3:12532957-12532976 Msa0799360:CDS 50.0%
TCGTAGACTAGGGCTCTGTT+TGG - chr5_3:12533259-12533278 Msa0799360:intron 50.0%
AGATATGCCATGCCAAGCTG+TGG - chr5_3:12534007-12534026 Msa0799360:CDS 50.0%
!! GGAAGAAGCACCAAAGTGGA+AGG - chr5_3:12534139-12534158 Msa0799360:intron 50.0%
GGTAGAGGAGGAAAGACGAA+AGG - chr5_3:12534412-12534431 Msa0799360:CDS 50.0%
GAGGAGGAAAGACGAAAGGA+AGG - chr5_3:12534416-12534435 Msa0799360:CDS 50.0%
GAAGGTGAAGACACCGACAA+TGG - chr5_3:12534464-12534483 Msa0799360:CDS 50.0%
AACTGGCGGCATCAATAAGC+AGG - chr5_3:12535583-12535602 Msa0799360:intron 50.0%
TCCACCCAAATCAGACTGAG+GGG + chr5_3:12535678-12535697 None:intergenic 50.0%
GTCCACCCAAATCAGACTGA+GGG + chr5_3:12535679-12535698 None:intergenic 50.0%
TGTCCACCCAAATCAGACTG+AGG + chr5_3:12535680-12535699 None:intergenic 50.0%
GATTTGGGTGGACATGTTCG+TGG - chr5_3:12535686-12535705 Msa0799360:intron 50.0%
GGTGGACATGTTCGTGGAAA+AGG - chr5_3:12535692-12535711 Msa0799360:intron 50.0%
! CAGCACTAGTTTCACCCATG+TGG + chr5_3:12535838-12535857 None:intergenic 50.0%
TACAGATATCCCCCCGTGTT+TGG + chr5_3:12535885-12535904 None:intergenic 50.0%
TAGACGATGCAGTTCTTCGG+AGG - chr5_3:12535903-12535922 Msa0799360:intron 50.0%
GCATACCTTTCCTGATGCCA+TGG - chr5_3:12535925-12535944 Msa0799360:CDS 50.0%
TCTTGCCATGGCATCAGGAA+AGG + chr5_3:12535933-12535952 None:intergenic 50.0%
CTGATGCCATGGCAAGAGAT+GGG - chr5_3:12535936-12535955 Msa0799360:CDS 50.0%
GGCAGCCATTTCCAGAACAA+TGG + chr5_3:12536306-12536325 None:intergenic 50.0%
GAAATGGCTGCCTTCCGTAT+AGG - chr5_3:12536314-12536333 Msa0799360:CDS 50.0%
CTGCCTTCCGTATAGGAATG+TGG - chr5_3:12536321-12536340 Msa0799360:CDS 50.0%
TGCCCACTCTGATAAACAGC+AGG + chr5_3:12536426-12536445 None:intergenic 50.0%
GCTGTTTATCAGAGTGGGCA+TGG - chr5_3:12536426-12536445 Msa0799360:intron 50.0%
TCAGGTCATTGTGGACATGC+GGG - chr5_3:12536637-12536656 Msa0799360:CDS 50.0%
TCACCAACTTCAAGGGTCAC+TGG + chr5_3:12536716-12536735 None:intergenic 50.0%
GACGACCTGATGTGAAACTC+TGG + chr5_3:12536793-12536812 None:intergenic 50.0%
AGGTCGTCTATACAACCAGG+TGG - chr5_3:12536805-12536824 Msa0799360:intron 50.0%
! GCTTGTTCATATTCTGGGGG+TGG - chr5_3:12536960-12536979 Msa0799360:intron 50.0%
!!! GGGTGGGATGTTGTTTTGAC+AGG - chr5_3:12536977-12536996 Msa0799360:intron 50.0%
!!! GGGATGTTGTTTTGACAGGC+AGG - chr5_3:12536981-12537000 Msa0799360:intron 50.0%
CACCAATATCACTGGCAGAC+TGG + chr5_3:12537305-12537324 None:intergenic 50.0%
TTCCCCGGCTACGTATAATC+TGG - chr5_3:12537379-12537398 Msa0799360:CDS 50.0%
GACCAGATTATACGTAGCCG+GGG + chr5_3:12537384-12537403 None:intergenic 50.0%
CCCGTCAGAAGAAGGAATTG+TGG - chr5_3:12537494-12537513 Msa0799360:CDS 50.0%
AAGGTAGCTTCATGCTGCCA+AGG - chr5_3:12537561-12537580 Msa0799360:CDS 50.0%
AGGTAGCTTCATGCTGCCAA+GGG - chr5_3:12537562-12537581 Msa0799360:CDS 50.0%
GGGGTTAATGCTGTGATCAC+AGG - chr5_3:12537961-12537980 Msa0799360:CDS 50.0%
AGGTCGGCGGTGATTTCAGT+CGG + chr5_3:12532468-12532487 None:intergenic 55.0%
GATGAAACAAACGTGGCCGG+AGG + chr5_3:12532520-12532539 None:intergenic 55.0%
TTCTGATCGTCCTCAGGCCA+TGG - chr5_3:12532704-12532723 Msa0799360:intron 55.0%
TGAAAGGGATCCACCGGATG+TGG - chr5_3:12532824-12532843 Msa0799360:intron 55.0%
ATGCAGTCCACAGCTTGGCA+TGG + chr5_3:12534017-12534036 None:intergenic 55.0%
!! GGATGACCTGAAGCGGGTTA+TGG - chr5_3:12534307-12534326 Msa0799360:CDS 55.0%
GGAGTCACTCCCATATCCCT+TGG - chr5_3:12535548-12535567 Msa0799360:intron 55.0%
! GCAGGAGCATGATGCACTTC+TGG - chr5_3:12535601-12535620 Msa0799360:intron 55.0%
!! ACCCCTCAGTCTGATTTGGG+TGG - chr5_3:12535674-12535693 Msa0799360:intron 55.0%
CCATCTCTTGCCATGGCATC+AGG + chr5_3:12535938-12535957 None:intergenic 55.0%
CCTGATGCCATGGCAAGAGA+TGG - chr5_3:12535935-12535954 Msa0799360:CDS 55.0%
TGGCTTCCCATCTCTTGCCA+TGG + chr5_3:12535945-12535964 None:intergenic 55.0%
GCTGCTTCGGTCCATTGTTC+TGG - chr5_3:12536292-12536311 Msa0799360:intron 55.0%
ACCAGGTGGAAACAATGGCC+CGG - chr5_3:12536819-12536838 Msa0799360:intron 55.0%
GGTCGGCGGTGATTTCAGTC+GGG + chr5_3:12532467-12532486 None:intergenic 60.0%
ACGGTGGTTAACGGCGAGGT+CGG + chr5_3:12532484-12532503 None:intergenic 60.0%
AGTGACGGTGGTTAACGGCG+AGG + chr5_3:12532488-12532507 None:intergenic 60.0%
CGTCCTCAGGCCATGGTTTC+TGG - chr5_3:12532711-12532730 Msa0799360:intron 60.0%
!!! CTGGTTTTGCGAAGGCGGAG+AGG - chr5_3:12532730-12532749 Msa0799360:intron 60.0%
AAGGGATCCACCGGATGTGG+TGG - chr5_3:12532827-12532846 Msa0799360:intron 60.0%
ACCGGGCCATTGTTTCCACC+TGG + chr5_3:12536823-12536842 None:intergenic 60.0%
GTGGGTGTCCCGTCAGAAGA+AGG - chr5_3:12537486-12537505 Msa0799360:CDS 60.0%
GTGGTTAACGGCGAGGTCGG+CGG + chr5_3:12532481-12532500 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 12532137 12538335 12532137 ID=Msa0799360;Name=Msa0799360
chr5_3 mRNA 12532137 12538335 12532137 ID=Msa0799360-mRNA-1;Parent=Msa0799360;Name=Msa0799360-mRNA-1;_AED=0.05;_eAED=0.05;_QI=103|1|1|1|1|1|9|142|983
chr5_3 exon 12532137 12532489 12532137 ID=Msa0799360-mRNA-1:exon:5176;Parent=Msa0799360-mRNA-1
chr5_3 exon 12532943 12533166 12532943 ID=Msa0799360-mRNA-1:exon:5175;Parent=Msa0799360-mRNA-1
chr5_3 exon 12533571 12533831 12533571 ID=Msa0799360-mRNA-1:exon:5174;Parent=Msa0799360-mRNA-1
chr5_3 exon 12533924 12534034 12533924 ID=Msa0799360-mRNA-1:exon:5173;Parent=Msa0799360-mRNA-1
chr5_3 exon 12534232 12535032 12534232 ID=Msa0799360-mRNA-1:exon:5172;Parent=Msa0799360-mRNA-1
chr5_3 exon 12535910 12536074 12535910 ID=Msa0799360-mRNA-1:exon:5171;Parent=Msa0799360-mRNA-1
chr5_3 exon 12536303 12536388 12536303 ID=Msa0799360-mRNA-1:exon:5170;Parent=Msa0799360-mRNA-1
chr5_3 exon 12536587 12536810 12536587 ID=Msa0799360-mRNA-1:exon:5169;Parent=Msa0799360-mRNA-1
chr5_3 exon 12537364 12538335 12537364 ID=Msa0799360-mRNA-1:exon:5168;Parent=Msa0799360-mRNA-1
chr5_3 five_prime_UTR 12538233 12538335 12538233 ID=Msa0799360-mRNA-1:five_prime_utr;Parent=Msa0799360-mRNA-1
chr5_3 CDS 12537364 12538232 12537364 ID=Msa0799360-mRNA-1:cds;Parent=Msa0799360-mRNA-1
chr5_3 CDS 12536587 12536810 12536587 ID=Msa0799360-mRNA-1:cds;Parent=Msa0799360-mRNA-1
chr5_3 CDS 12536303 12536388 12536303 ID=Msa0799360-mRNA-1:cds;Parent=Msa0799360-mRNA-1
chr5_3 CDS 12535910 12536074 12535910 ID=Msa0799360-mRNA-1:cds;Parent=Msa0799360-mRNA-1
chr5_3 CDS 12534232 12535032 12534232 ID=Msa0799360-mRNA-1:cds;Parent=Msa0799360-mRNA-1
chr5_3 CDS 12533924 12534034 12533924 ID=Msa0799360-mRNA-1:cds;Parent=Msa0799360-mRNA-1
chr5_3 CDS 12533571 12533831 12533571 ID=Msa0799360-mRNA-1:cds;Parent=Msa0799360-mRNA-1
chr5_3 CDS 12532943 12533166 12532943 ID=Msa0799360-mRNA-1:cds;Parent=Msa0799360-mRNA-1
chr5_3 CDS 12532279 12532489 12532279 ID=Msa0799360-mRNA-1:cds;Parent=Msa0799360-mRNA-1
chr5_3 three_prime_UTR 12532137 12532278 12532137 ID=Msa0799360-mRNA-1:three_prime_utr;Parent=Msa0799360-mRNA-1
Gene Sequence

>Msa0799360

ATGGTTCTTCAATTCCACGAACACATAATCACAGAACTTCTAGAAGACAACAATGGCGGACTCACAATTCTCTCATCAGGTCTCTCCTTATCAAAACTCATCTCCTCTCTTCTTCTTCTCCACTCTTCTTCACAAGGCACACTTCTCATTCTCTCTCCTTCTCCCACTCTCAAATCCAAAATCAATTTCCATCTCAAAACCCTAAACCCCCAAATTCACCAAATCCCGACTGAAATCACCGCCGACCTCGCCGTTAACCACCGTCACTCTCTCTATTCCTCCGGCCACGTTTGTTTCATCACTCCTCGAATCCTCATCGTTGATCTTTTAACAAACAAACTCCCTACCTCAACAATCTCCGGTATATTAATCCTCAATGCACATTCAATTTCCGAAACTTCCACCGAAGCTTTTATTGTAAGGATTTTCCGTTCGTTTAATCGCGATGCGTATGTTAGAGCATTTTCTGATCGTCCTCAGGCCATGGTTTCTGGTTTTGCGAAGGCGGAGAGGACGATGAAGTGTTTAGGGTTACGGAAGTTACATTTATGGCCGAGGTTTCAGGTTTACGTGAGTCAAGAACTTGAAAGGGATCCACCGGATGTGGTGGATATTAGGGTTCCGATGACGAAGTATATGGTGGGGATTCAGAAAGCGATTGTTGAGGTTATGGATGCGTGTTTGAAAGAGATGAGGAAGACGAATAAGGTTGATGTGGAGGATTTGACGGTGGAGAATGGGTTGTTTAAGTCGTTTGATGAGATTGTGAGGAGACAGTTGGATCCAATTTGGCATACTTTAGGGAAGAAGACTAAGCAGCTTGTTTCTGATCTTAAGACGTTGAGGAAGTTGTTGGATTATCTAGTCAGGTATGATGCGGTGACTTACTTGAAATATTTGGATACACTCAGAGTGTCGGAGAGTTTTCGTTCTGTTTGGATATTTGCAGAGGCAAGCTATAAGATATTTGACTATGCAAAGAAACGTGTTTATCATCTTGTGAGGTCAGATGGTGTGAAATTGAACGAGTCTAGTAAGAATGTCAAAAACAAAAAGAAAAAAGGCAAAGGGGATAATGAAGACACTGAAGAAGCTGATGTCACTGCCTCAACCAGTTCAAATCATGGCATAGTATTGGAAGAAGTCTTGGAAGAAGCACCAAAGTGGAAGGTCTTACGTGATATTCTTGAAGAGGTAGAGGAGGAAAGACGAAAGGAAGGCATGTTGAGAGAAGAAGTGTTGGCTGAAGGTGAAGACACCGACAATGGCATTGTATTGGTGGCATGTAAAGATGAAAGGTCGTGCTTGCAGCTTGAAGAATGCATCACCAACAGTCCAAAAAAGGTCATTCAAGATGAATGGAAGAAGTACTTACTGAACAAAGTACAACTGCGTGATGTAGTGCATAAGAAAAAGAAGCCAAAGGATCCTAAGGGTTTTGGGATTCTTAATGGAGTCACTCCCATATCCCTTGGACAGAATACAGAAACTGGCGGCATCAATAAGCAGGAGCATGATGCACTTCTGGCAGCAGCTTCGAAACTGCGAAATCTTTCTGAAAAAAATCATGTTGAAGATACCCCTCAGTCTGATTTGGGTGGACATGTTCGTGGAAAAGGCAAGAGAAAATTGGGGAATAGAAATGGCCCAATCATTATTGATGGCTCTAGTGTTCAGAGTAACAATAAGGAGGAAGTGGCAAGTGGTAAAACTGGGATATCCGATTCAAAAAATAAAGCCCACATGGGTGAAACTAGTGCTGTCAGTAATGATAGAGTTTGTGAAACCAAACACGGGGGGATATCTGTAGACGATGCAGTTCTTCGGAGGCATACCTTTCCTGATGCCATGGCAAGAGATGGGAAGCCACTACCACCAGTACATTTTTATGCCCTTGAAAGTGATCAGCCTATACTGGACATATTAAAGCCCTCTATAATTGTCGTTTACCATCCAGACATGACCTTTGTAAGAGAAATCGAAGTCTACAAAGCTGAGAATCCCTCTAAAAGGTTAAAGGTATACTTTATTTTCTATGAAGATTCTACCGAGGTTCAGAAGTTTGAGGCAAGTATACGTAGAGAGAATGGAGCATTTGAATCTTTGATCAGACAAAAATCTATGATGATGATTCCAATTGACCAGAGTGGGCATGGTTTAGGATTTAATTCTACCCTAGATTCAGATTTAAATACTATCCAGAACTCAATAACCAGAAAAGCAGGTGGGAGAAAAGAGGATGATAAAGAAATGCAGGTCATTGTGGACATGCGGGAGTTCATGAGCAGCCTTCCAAATATTCTTCATCAAAAGGGAATGCGCATAATTCCAGTGACCCTTGAAGTTGGTGACTATATCCTATCACCATTAATTTGCGTGGAAAGGAAAAGTATTCAGGATCTCTTCCAGAGTTTCACATCAGGTCGTCTATACAACCAGGTGGAAACAATGGCCCGGTATTATAAAATACCGGTGCTCTTGATTGAGTTTTCACAGGATAAGAGCTTCTCATTTCAGTCTGCCAGTGATATTGGTGATGATGTGACGCCCAATAGCATTATATCAAAGTTGTCATTACTTGCTCTACATTTTCCCCGGCTACGTATAATCTGGTCTCGAAGTTTGCATGCAACTTCTGAAATATTTGCTTCACTAAAGGCAAATCAAGATGAACCAGATGAAACAAAAGCAATGAGAGTGGGTGTCCCGTCAGAAGAAGGAATTGTGGAAAGTGACGTGAGGGCTGAAAATTACAACACATCGGCTGTGGAGTTTCTAAGACGACTTCCTGGTGTTACAGATTCTAATTATAGGGCCATAATGGATGGGTGTAAAAGTTTGGCAGAACTTGCACTTCTTCCAGTAGAAAAGCTAGCTGAAATAATGGGTGGTCATAAAGCTGCTCGTACCCTTAGAGACTTTCTAGATGCTAAATATCCCACTTTGTTGTGA
Protein sequence

>Msa0799360

MVLQFHEHIITELLEDNNGGLTILSSGLSLSKLISSLLLLHSSSQGTLLILSPSPTLKSKINFHLKTLNPQIHQIPTEITADLAVNHRHSLYSSGHVCFITPRILIVDLLTNKLPTSTISGILILNAHSISETSTEAFIVRIFRSFNRDAYVRAFSDRPQAMVSGFAKAERTMKCLGLRKLHLWPRFQVYVSQELERDPPDVVDIRVPMTKYMVGIQKAIVEVMDACLKEMRKTNKVDVEDLTVENGLFKSFDEIVRRQLDPIWHTLGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRVSESFRSVWIFAEASYKIFDYAKKRVYHLVRSDGVKLNESSKNVKNKKKKGKGDNEDTEEADVTASTSSNHGIVLEEVLEEAPKWKVLRDILEEVEEERRKEGMLREEVLAEGEDTDNGIVLVACKDERSCLQLEECITNSPKKVIQDEWKKYLLNKVQLRDVVHKKKKPKDPKGFGILNGVTPISLGQNTETGGINKQEHDALLAAASKLRNLSEKNHVEDTPQSDLGGHVRGKGKRKLGNRNGPIIIDGSSVQSNNKEEVASGKTGISDSKNKAHMGETSAVSNDRVCETKHGGISVDDAVLRRHTFPDAMARDGKPLPPVHFYALESDQPILDILKPSIIVVYHPDMTFVREIEVYKAENPSKRLKVYFIFYEDSTEVQKFEASIRRENGAFESLIRQKSMMMIPIDQSGHGLGFNSTLDSDLNTIQNSITRKAGGRKEDDKEMQVIVDMREFMSSLPNILHQKGMRIIPVTLEVGDYILSPLICVERKSIQDLFQSFTSGRLYNQVETMARYYKIPVLLIEFSQDKSFSFQSASDIGDDVTPNSIISKLSLLALHFPRLRIIWSRSLHATSEIFASLKANQDEPDETKAMRVGVPSEEGIVESDVRAENYNTSAVEFLRRLPGVTDSNYRAIMDGCKSLAELALLPVEKLAEIMGGHKAARTLRDFLDAKYPTLL*