Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0838160 | XP_024640978.1 | 78.302 | 106 | 23 | 0 | 614 | 719 | 181 | 286 | 6.34e-38 | 160 |
| Msa0838160 | XP_024640978.1 | 97.500 | 520 | 13 | 0 | 1 | 520 | 1 | 520 | 0.0 | 1034 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0838160 | sp|F4I9E1|NFD4_ARATH | 31.698 | 530 | 327 | 14 | 12 | 518 | 42 | 559 | 1.71e-64 | 228 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0838160 | G7JXI0 | 78.302 | 106 | 23 | 0 | 614 | 719 | 181 | 286 | 3.03e-38 | 160 |
| Msa0838160 | G7JXI0 | 97.500 | 520 | 13 | 0 | 1 | 520 | 1 | 520 | 0.0 | 1034 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0631700 | Msa0838160 | 0.812398 | 4.325776e-51 | -8.615850e-47 |
| Msa0685390 | Msa0838160 | -0.812031 | 5.200457e-51 | -8.615850e-47 |
| Msa0758930 | Msa0838160 | 0.838608 | 2.599409e-57 | -8.615850e-47 |
| Msa0838160 | Msa1146980 | 0.809675 | 1.682724e-50 | -8.615850e-47 |
| Msa0398770 | Msa0838160 | 0.801035 | 1.088900e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0838160 | MtrunA17_Chr5g0405621 | 97.500 | 520 | 13 | 0 | 1 | 520 | 1 | 520 | 0.0 | 1034 |
| Msa0838160 | MtrunA17_Chr5g0405621 | 78.302 | 106 | 23 | 0 | 614 | 719 | 181 | 286 | 5.83e-42 | 160 |
| Msa0838160 | MtrunA17_Chr4g0037301 | 63.340 | 521 | 179 | 4 | 11 | 520 | 13 | 532 | 0.0 | 659 |
| Msa0838160 | MtrunA17_Chr2g0304561 | 36.667 | 540 | 304 | 7 | 14 | 518 | 13 | 549 | 1.63e-106 | 337 |
| Msa0838160 | MtrunA17_Chr4g0064981 | 35.165 | 546 | 311 | 7 | 14 | 518 | 12 | 555 | 7.47e-103 | 327 |
| Msa0838160 | MtrunA17_Chr7g0225191 | 33.805 | 565 | 311 | 7 | 12 | 518 | 14 | 573 | 2.25e-100 | 321 |
| Msa0838160 | MtrunA17_Chr3g0132161 | 34.909 | 550 | 308 | 12 | 9 | 518 | 11 | 550 | 2.56e-96 | 310 |
| Msa0838160 | MtrunA17_Chr5g0442481 | 34.808 | 520 | 319 | 7 | 12 | 519 | 10 | 521 | 1.75e-93 | 301 |
| Msa0838160 | MtrunA17_Chr2g0330551 | 32.413 | 543 | 320 | 10 | 8 | 520 | 2 | 527 | 2.32e-87 | 285 |
| Msa0838160 | MtrunA17_Chr1g0210284 | 32.532 | 541 | 331 | 9 | 8 | 520 | 21 | 555 | 9.31e-84 | 277 |
| Msa0838160 | MtrunA17_Chr1g0174101 | 32.022 | 534 | 329 | 8 | 13 | 518 | 24 | 551 | 1.13e-83 | 277 |
| Msa0838160 | MtrunA17_Chr1g0210274 | 33.087 | 541 | 328 | 8 | 8 | 520 | 21 | 555 | 1.13e-83 | 277 |
| Msa0838160 | MtrunA17_Chr1g0210291 | 32.699 | 578 | 334 | 12 | 13 | 550 | 25 | 587 | 1.15e-83 | 277 |
| Msa0838160 | MtrunA17_Chr7g0264861 | 31.550 | 542 | 332 | 9 | 13 | 519 | 29 | 566 | 1.14e-80 | 270 |
| Msa0838160 | MtrunA17_Chr1g0171591 | 30.812 | 542 | 334 | 9 | 13 | 518 | 24 | 560 | 3.28e-80 | 268 |
| Msa0838160 | MtrunA17_Chr7g0251871 | 31.818 | 550 | 328 | 15 | 11 | 519 | 5 | 548 | 1.91e-71 | 243 |
| Msa0838160 | MtrunA17_Chr5g0408921 | 31.418 | 557 | 329 | 14 | 11 | 519 | 5 | 556 | 2.93e-70 | 240 |
| Msa0838160 | MtrunA17_Chr8g0369621 | 30.991 | 555 | 332 | 12 | 11 | 518 | 46 | 596 | 1.51e-68 | 237 |
| Msa0838160 | MtrunA17_Chr3g0106801 | 30.116 | 518 | 339 | 9 | 13 | 520 | 7 | 511 | 2.28e-61 | 214 |
| Msa0838160 | MtrunA17_Chr3g0106821 | 31.383 | 376 | 246 | 6 | 13 | 382 | 7 | 376 | 2.49e-50 | 180 |
| Msa0838160 | MtrunA17_Chr2g0333371 | 29.450 | 309 | 157 | 8 | 236 | 518 | 12 | 285 | 6.35e-38 | 144 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0838160 | AT4G34950.1 | 62.873 | 536 | 173 | 3 | 11 | 520 | 14 | 549 | 0.0 | 694 |
| Msa0838160 | AT4G34950.1 | 40.000 | 110 | 65 | 1 | 614 | 722 | 184 | 293 | 2.46e-15 | 80.1 |
| Msa0838160 | AT2G16660.1 | 64.286 | 518 | 178 | 2 | 10 | 520 | 11 | 528 | 0.0 | 672 |
| Msa0838160 | AT2G16660.1 | 41.121 | 107 | 61 | 1 | 614 | 718 | 182 | 288 | 4.35e-16 | 82.4 |
| Msa0838160 | AT2G16660.2 | 62.368 | 380 | 136 | 2 | 10 | 382 | 11 | 390 | 2.35e-159 | 467 |
| Msa0838160 | AT2G16660.2 | 41.121 | 107 | 61 | 1 | 614 | 718 | 182 | 288 | 1.98e-16 | 82.4 |
| Msa0838160 | AT1G80530.1 | 35.526 | 532 | 311 | 9 | 14 | 518 | 14 | 540 | 1.42e-104 | 332 |
| Msa0838160 | AT5G14120.1 | 36.655 | 562 | 304 | 6 | 8 | 520 | 11 | 569 | 3.04e-103 | 328 |
| Msa0838160 | AT3G01930.2 | 35.552 | 571 | 301 | 7 | 7 | 518 | 10 | 572 | 4.65e-102 | 325 |
| Msa0838160 | AT5G50630.1 | 34.924 | 524 | 325 | 7 | 12 | 524 | 15 | 533 | 2.53e-100 | 320 |
| Msa0838160 | AT5G50520.1 | 34.924 | 524 | 325 | 7 | 12 | 524 | 15 | 533 | 2.53e-100 | 320 |
| Msa0838160 | AT2G28120.1 | 35.065 | 539 | 317 | 7 | 8 | 519 | 12 | 544 | 1.42e-98 | 316 |
| Msa0838160 | AT2G39210.1 | 34.508 | 539 | 315 | 9 | 13 | 519 | 21 | 553 | 1.05e-95 | 309 |
| Msa0838160 | AT1G74780.1 | 33.771 | 533 | 310 | 10 | 13 | 520 | 7 | 521 | 1.63e-86 | 283 |
| Msa0838160 | AT2G34350.1 | 32.833 | 533 | 316 | 8 | 8 | 519 | 2 | 513 | 8.82e-84 | 276 |
| Msa0838160 | AT2G34350.2 | 32.833 | 533 | 316 | 8 | 8 | 519 | 2 | 513 | 8.82e-84 | 276 |
| Msa0838160 | AT1G18940.1 | 31.530 | 536 | 309 | 9 | 13 | 520 | 9 | 514 | 3.69e-81 | 269 |
| Msa0838160 | AT2G34355.1 | 31.879 | 527 | 323 | 8 | 13 | 520 | 7 | 516 | 4.37e-76 | 255 |
| Msa0838160 | AT3G01930.1 | 35.118 | 467 | 236 | 8 | 111 | 518 | 1 | 459 | 1.95e-73 | 246 |
| Msa0838160 | AT3G01630.1 | 30.150 | 534 | 331 | 12 | 12 | 518 | 22 | 540 | 3.57e-67 | 232 |
| Msa0838160 | AT3G01630.2 | 30.150 | 534 | 331 | 12 | 12 | 518 | 40 | 558 | 6.00e-67 | 232 |
| Msa0838160 | AT4G19450.1 | 31.589 | 535 | 312 | 16 | 11 | 497 | 5 | 533 | 6.25e-66 | 229 |
| Msa0838160 | AT1G31470.1 | 31.698 | 530 | 327 | 14 | 12 | 518 | 42 | 559 | 1.74e-65 | 228 |
| Msa0838160 | AT3G01930.3 | 33.410 | 434 | 229 | 7 | 7 | 388 | 10 | 435 | 2.69e-65 | 223 |
| Msa0838160 | AT5G45275.1 | 29.930 | 568 | 344 | 13 | 11 | 531 | 5 | 565 | 4.34e-63 | 221 |
| Msa0838160 | AT2G30300.1 | 30.214 | 513 | 325 | 9 | 14 | 519 | 8 | 494 | 9.21e-62 | 216 |
| Msa0838160 | AT4G19450.2 | 31.807 | 415 | 234 | 13 | 11 | 382 | 5 | 413 | 2.60e-53 | 190 |
| Msa0838160 | AT2G34355.2 | 29.843 | 382 | 240 | 7 | 150 | 520 | 2 | 366 | 3.92e-44 | 163 |
Find 160 sgRNAs with CRISPR-Local
Find 616 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTTTGGACGCATTCTTTC+TGG | 0.067041 | 5_4:+12505236 | Msa0838160:CDS |
| TCCTATGATTGGTGCTATTA+TGG | 0.114646 | 5_4:+12503691 | Msa0838160:CDS |
| ACTTCTTGTTCCTTTATATT+TGG | 0.160234 | 5_4:+12504899 | Msa0838160:CDS |
| CATGCTTGTGTATGTGATTA+TGG | 0.186967 | 5_4:+12506326 | Msa0838160:CDS |
| GAATAGCCCCTCTTCCTTAT+TGG | 0.195967 | 5_4:+12503756 | Msa0838160:CDS |
| CCCTTTAGAATGCCGGAAAT+TGG | 0.221003 | 5_4:-12504564 | None:intergenic |
| CATTTCATTCATAAGCATTT+GGG | 0.248417 | 5_4:+12505211 | Msa0838160:CDS |
| ATGGCTTTCGCTTGTGTATT+GGG | 0.254616 | 5_4:+12506345 | Msa0838160:CDS |
| AGCTGTGGAATGTTATTCTT+TGG | 0.261627 | 5_4:+12510699 | Msa0838160:CDS |
| AGCCGAGCCTCTGAATTCTT+AGG | 0.276403 | 5_4:-12506613 | None:intergenic |
| AAAGATGTTGGTAAAGCTTT+TGG | 0.279837 | 5_4:+12503623 | Msa0838160:CDS |
| CCTATGATTGGTGCTATTAT+GGG | 0.281771 | 5_4:+12503692 | Msa0838160:CDS |
| ATTATGGGATTCATTGGTTA+TGG | 0.282873 | 5_4:+12503707 | Msa0838160:CDS |
| AAACCCACCAGCGCCGTTTC+CGG | 0.294550 | 5_4:+12510640 | Msa0838160:intron |
| TCTCAGATTCTGATGTTCTT+TGG | 0.295006 | 5_4:+12506033 | Msa0838160:CDS |
| CTCATTCTTAACCTTCCTAT+TGG | 0.296648 | 5_4:+12506204 | Msa0838160:CDS |
| ATAAGCATTTGGGGTTTCTT+TGG | 0.297026 | 5_4:+12505221 | Msa0838160:CDS |
| CTATTTGGTCTCAAATACTA+TGG | 0.305461 | 5_4:+12506165 | Msa0838160:CDS |
| GTTATGTTTACCAGCCAATA+AGG | 0.305623 | 5_4:-12503770 | None:intergenic |
| CAGGCATGCCAAGGTTAGTT+TGG | 0.310026 | 5_4:+12506001 | Msa0838160:CDS |
| TCATTTCATTCATAAGCATT+TGG | 0.318055 | 5_4:+12505210 | Msa0838160:CDS |
| CTCTTGGCATTTGATATCTC+TGG | 0.323684 | 5_4:+12504813 | Msa0838160:CDS |
| CTCTTGGCATTTGATATCTC+TGG | 0.323684 | 5_4:+12512664 | Msa0838160:CDS |
| GCAGCAGCTTCAGAACTATT+TGG | 0.325560 | 5_4:+12506150 | Msa0838160:CDS |
| TTACCAGGATCACTATATAT+TGG | 0.329554 | 5_4:+12506078 | Msa0838160:CDS |
| TATGGCTTTCGCTTGTGTAT+TGG | 0.340093 | 5_4:+12506344 | Msa0838160:CDS |
| AAGGAAGAGGGGCTATTCTT+TGG | 0.346608 | 5_4:-12503751 | None:intergenic |
| TTTCTCTGTGGTGTTGGAAC+AGG | 0.349477 | 5_4:+12505122 | Msa0838160:CDS |
| ACTTCAGTTATTCCTATGAT+TGG | 0.350491 | 5_4:+12503680 | Msa0838160:CDS |
| ACATAAACATGTTCTTTCAT+TGG | 0.356376 | 5_4:+12512690 | Msa0838160:CDS |
| TTGAACATGAAGAAATATAA+AGG | 0.362290 | 5_4:-12512760 | None:intergenic |
| ACAGATTCATGAACCTTTGT+TGG | 0.362751 | 5_4:+12512810 | Msa0838160:CDS |
| CAAGAAGTGGCATAGCTAAT+AGG | 0.363471 | 5_4:-12504884 | None:intergenic |
| TATATTGGTTCAATCTTAGT+AGG | 0.367284 | 5_4:+12506093 | Msa0838160:CDS |
| GATGTGTATATTCTTGTGTA+TGG | 0.373027 | 5_4:+12504467 | Msa0838160:intron |
| TCATAAACATGTTATTTCAT+TGG | 0.374079 | 5_4:+12504839 | Msa0838160:CDS |
| TTGAATACGACCAAATATAA+AGG | 0.374709 | 5_4:-12504909 | None:intergenic |
| TACAATAGTTGTTTATCTCT+TGG | 0.379625 | 5_4:+12512648 | Msa0838160:CDS |
| TGAACCTTTGTTGGCACAAA+AGG | 0.386700 | 5_4:+12504968 | Msa0838160:CDS |
| GGTGCTATTATGGGATTCAT+TGG | 0.388521 | 5_4:+12503701 | Msa0838160:CDS |
| TACAGTAGCTGTTTATCTCT+TGG | 0.395925 | 5_4:+12504797 | Msa0838160:CDS |
| CGAGATAAGTACAAGGTTGC+CGG | 0.402317 | 5_4:-12510659 | None:intergenic |
| TTGAAGTGAAGACCAATGAT+AGG | 0.404552 | 5_4:+12512881 | Msa0838160:CDS |
| CCAATTTCCGGCATTCTAAA+GGG | 0.406195 | 5_4:+12504564 | Msa0838160:CDS |
| AGAATTCAGAGGCTCGGCTC+TGG | 0.407913 | 5_4:+12506617 | Msa0838160:CDS |
| TTGTTCTAAATGCAAGAAAC+AGG | 0.408668 | 5_4:-12506380 | None:intergenic |
| ATCTTAGTAGGAATATGTTA+TGG | 0.410113 | 5_4:+12506105 | Msa0838160:CDS |
| ACATATTGCTTGTACCCATA+TGG | 0.411307 | 5_4:-12503510 | None:intergenic |
| TCCAATTTCCGGCATTCTAA+AGG | 0.413059 | 5_4:+12504563 | Msa0838160:CDS |
| TTCAATATCATAAAGGTATC+CGG | 0.421548 | 5_4:-12506253 | None:intergenic |
| GTGTCATTTCTCTGTGGTGT+TGG | 0.422085 | 5_4:+12505116 | Msa0838160:CDS |
| ACAGGTTCATGAACCTTTGT+TGG | 0.424667 | 5_4:+12504959 | Msa0838160:CDS |
| GCTGTGGAATGTTATTCTTT+GGG | 0.425465 | 5_4:+12510700 | Msa0838160:CDS |
| AATTATAGCAGGAACATAGA+TGG | 0.426352 | 5_4:-12512521 | None:intergenic |
| GATGAATAACTTGGGACAAA+TGG | 0.427374 | 5_4:+12505154 | Msa0838160:CDS |
| AGATGTGTTAAAGTCTCTAA+TGG | 0.430909 | 5_4:+12503562 | Msa0838160:CDS |
| ACAAAAGGTTTCAGAAGAAA+AGG | 0.433859 | 5_4:+12504983 | Msa0838160:CDS |
| TATTCTTTGGGAGCTCCCTC+TGG | 0.440864 | 5_4:+12510712 | Msa0838160:CDS |
| GTGCAAGTGTTTCCGCCTCC+TGG | 0.444901 | 5_4:-12506288 | None:intergenic |
| GTATGCTCTTCCCCTATCAT+TGG | 0.445016 | 5_4:-12512893 | None:intergenic |
| ATCATAGGAATAACTGAAGT+TGG | 0.445501 | 5_4:-12503677 | None:intergenic |
| TAGGATTTGTGACAGCCATA+TGG | 0.447435 | 5_4:+12503495 | Msa0838160:CDS |
| CAGGTCTTGTTTCTGATCGT+TGG | 0.448059 | 5_4:+12503654 | Msa0838160:CDS |
| ATTAAAAGAAAACCGGTGAT+AGG | 0.449467 | 5_4:+12505038 | Msa0838160:CDS |
| AATCTCAACTTCTTCTACGT+TGG | 0.454734 | 5_4:-12505018 | None:intergenic |
| GAAAAGATGAATGAACCAAT+AGG | 0.463266 | 5_4:-12506219 | None:intergenic |
| ATGAATAACTTGGGACAAAT+GGG | 0.466370 | 5_4:+12505155 | Msa0838160:CDS |
| TTCGCTTGTGTATTGGGGTG+TGG | 0.467433 | 5_4:+12506351 | Msa0838160:CDS |
| TTCATTCCAAGCACCTTCAC+CGG | 0.471009 | 5_4:+12510750 | Msa0838160:CDS |
| AAAGGTTATGCCACATAAGA+TGG | 0.471657 | 5_4:+12507216 | Msa0838160:CDS |
| AAGTACAAGGTTGCCGGAAA+CGG | 0.472142 | 5_4:-12510653 | None:intergenic |
| CCGTCTCCGGTGAAGGTGCT+TGG | 0.476518 | 5_4:-12510756 | None:intergenic |
| AGCCCCTCTTCCTTATTGGC+TGG | 0.481952 | 5_4:+12503760 | Msa0838160:CDS |
| TCTTCTGTGGAAGTTGAAGC+TGG | 0.483330 | 5_4:-12504729 | None:intergenic |
| AGAGCATACTATCATTGAAA+TGG | 0.483884 | 5_4:+12505064 | Msa0838160:CDS |
| TAGTGGCTTCAATATCATAA+AGG | 0.484536 | 5_4:-12506260 | None:intergenic |
| TGGTTACATTGCATTGGCAA+TGG | 0.486214 | 5_4:+12506053 | Msa0838160:CDS |
| TGCAACAAGGTGGAAGATGT+TGG | 0.486548 | 5_4:+12512857 | Msa0838160:CDS |
| CACTCTCTGAATACTACATC+AGG | 0.489900 | 5_4:+12505261 | Msa0838160:CDS |
| GCATTGGCAATGGCCTTACC+AGG | 0.490266 | 5_4:+12506063 | Msa0838160:CDS |
| CCCATAATAGCACCAATCAT+AGG | 0.490901 | 5_4:-12503692 | None:intergenic |
| ACCGGAAACTCACCCGTCTC+CGG | 0.491168 | 5_4:-12510769 | None:intergenic |
| GAACCAATATATAGTGATCC+TGG | 0.491333 | 5_4:-12506081 | None:intergenic |
| TGTGAGCATTAGTAGAAACT+TGG | 0.492149 | 5_4:-12504652 | None:intergenic |
| AATGAAATAACATGTTTATG+AGG | 0.496120 | 5_4:-12504837 | None:intergenic |
| TACATAACCCTTTAGAATGC+CGG | 0.497170 | 5_4:-12504571 | None:intergenic |
| AACTCACCCGTCTCCGGTGA+AGG | 0.501044 | 5_4:-12510763 | None:intergenic |
| GGAGGCGGAAACACTTGCAC+TGG | 0.501570 | 5_4:+12506291 | Msa0838160:CDS |
| AGTTGAGATTAAAAGAAAAC+CGG | 0.502662 | 5_4:+12505031 | Msa0838160:CDS |
| GAATTCAGAGGCTCGGCTCT+GGG | 0.505950 | 5_4:+12506618 | Msa0838160:CDS |
| AATGAAAGAACATGTTTATG+TGG | 0.509695 | 5_4:-12512688 | None:intergenic |
| AGAATAACATTCCACAGCTC+TGG | 0.512132 | 5_4:-12510695 | None:intergenic |
| AGGATTTGTGACAGCCATAT+GGG | 0.515315 | 5_4:+12503496 | Msa0838160:CDS |
| GGACAAATGGGACAGGCACT+TGG | 0.515436 | 5_4:+12505167 | Msa0838160:CDS |
| GCCGAGCCTCTGAATTCTTA+GGG | 0.519154 | 5_4:-12506612 | None:intergenic |
| TTGTGTATTGGGGTGTGGAT+TGG | 0.519733 | 5_4:+12506356 | Msa0838160:CDS |
| CTCTCTGTTGCTAAAGATGT+TGG | 0.521493 | 5_4:+12503611 | Msa0838160:CDS |
| GTTCTTTGGTTACATTGCAT+TGG | 0.523788 | 5_4:+12506047 | Msa0838160:CDS |
| AAGAACAAGCAGTTCGCCAG+AGG | 0.524494 | 5_4:-12510728 | None:intergenic |
| ACATAAGATGGAGAGAGAGC+TGG | 0.526187 | 5_4:+12507228 | Msa0838160:CDS |
| AGCTCTCTCTCCATCTTATG+TGG | 0.526680 | 5_4:-12507226 | None:intergenic |
| TGAAGTGAAGACCAATGATA+GGG | 0.532873 | 5_4:+12512882 | Msa0838160:CDS |
| CCAAGCACCTTCACCGGAGA+CGG | 0.535028 | 5_4:+12510756 | Msa0838160:CDS |
| GCAACAAGGTGGAAGATGTT+GGG | 0.535812 | 5_4:+12512858 | Msa0838160:CDS |
| TCATTGGTTATGGAGCTCAA+TGG | 0.539555 | 5_4:+12503717 | Msa0838160:CDS |
| AATATATAGTGATCCTGGTA+AGG | 0.541574 | 5_4:-12506076 | None:intergenic |
| ATGTGTATATTCTTGTGTAT+GGG | 0.545839 | 5_4:+12504468 | Msa0838160:CDS |
| GGCATTCTAAAGGGTTATGT+AGG | 0.548988 | 5_4:+12504573 | Msa0838160:CDS |
| GCAAAGAGGCAAATTATAGC+AGG | 0.554289 | 5_4:-12512532 | None:intergenic |
| AATAGTTCTGAAGCTGCTGC+TGG | 0.557803 | 5_4:-12506147 | None:intergenic |
| AAATGAACAAAGAAACATCA+TGG | 0.557965 | 5_4:-12505193 | None:intergenic |
| ATTATAGCAGGAACATAGAT+GGG | 0.558292 | 5_4:-12512520 | None:intergenic |
| TAGAAACTTGGATGGGTCTG+AGG | 0.561383 | 5_4:-12504640 | None:intergenic |
| CAATAGGAAGGTTAAGAATG+AGG | 0.565069 | 5_4:-12506203 | None:intergenic |
| ATTGAAGCCACTAGTGTACC+AGG | 0.566378 | 5_4:+12506270 | Msa0838160:CDS |
| GTATGCTCTTCACCTATCAC+CGG | 0.568349 | 5_4:-12505050 | None:intergenic |
| CAAGCACCTTCACCGGAGAC+GGG | 0.570400 | 5_4:+12510757 | Msa0838160:CDS |
| GCCACTAGTGTACCAGGAGG+CGG | 0.573885 | 5_4:+12506276 | Msa0838160:CDS |
| ATTTCATTCATAAGCATTTG+GGG | 0.573991 | 5_4:+12505212 | Msa0838160:CDS |
| GCTGCATTCCAAACTAACCT+TGG | 0.574137 | 5_4:-12506009 | None:intergenic |
| TTTACCAGCCAATAAGGAAG+AGG | 0.577066 | 5_4:-12503764 | None:intergenic |
| ATGGCAAACGTAGTTTCACC+AGG | 0.577180 | 5_4:+12506584 | Msa0838160:CDS |
| AAGCTGGTGGAGTTTCATGA+AGG | 0.580336 | 5_4:-12504713 | None:intergenic |
| TCCGCCTCCTGGTACACTAG+TGG | 0.580549 | 5_4:-12506277 | None:intergenic |
| AGCATTAGTAGAAACTTGGA+TGG | 0.581463 | 5_4:-12504648 | None:intergenic |
| AAATATAAAGGAACAAGAAG+TGG | 0.584319 | 5_4:-12504897 | None:intergenic |
| ATATGGGTACAAGCAATATG+TGG | 0.584975 | 5_4:+12503512 | Msa0838160:CDS |
| TCGGCTCTGGGAATGAAAAG+AGG | 0.586431 | 5_4:+12506630 | Msa0838160:CDS |
| GCAATGAGACAAATGACAGC+AGG | 0.587027 | 5_4:-12504681 | None:intergenic |
| TCCCTAAGAATTCAGAGGCT+CGG | 0.590194 | 5_4:+12506611 | Msa0838160:CDS |
| AGAACAAGCAGTTCGCCAGA+GGG | 0.591692 | 5_4:-12510727 | None:intergenic |
| TGGCTTTCGCTTGTGTATTG+GGG | 0.591806 | 5_4:+12506346 | Msa0838160:CDS |
| TCTGTGGAAGTTGAAGCTGG+TGG | 0.592235 | 5_4:-12504726 | None:intergenic |
| TGTATATTCTTGTGTATGGG+TGG | 0.598397 | 5_4:+12504471 | Msa0838160:CDS |
| TAACTTGGGACAAATGGGAC+AGG | 0.599118 | 5_4:+12505160 | Msa0838160:CDS |
| TTACCAGCCAATAAGGAAGA+GGG | 0.606426 | 5_4:-12503763 | None:intergenic |
| GAAAACAAACACCAGAGCTG+TGG | 0.611043 | 5_4:+12510684 | Msa0838160:CDS |
| GCAGAAAATCAGGCATGCCA+AGG | 0.615589 | 5_4:+12505992 | Msa0838160:intron |
| AAATATAAAGGAACAAGAAG+CGG | 0.616401 | 5_4:-12512748 | None:intergenic |
| AGCCTCTGAATTCTTAGGGA+CGG | 0.623162 | 5_4:-12506608 | None:intergenic |
| AGATGAATGAACCAATAGGA+AGG | 0.629288 | 5_4:-12506215 | None:intergenic |
| TGAATTCTTAGGGACGGCCC+TGG | 0.632744 | 5_4:-12506602 | None:intergenic |
| TTGTTTGTGTCATTTCTCTG+TGG | 0.636758 | 5_4:+12505110 | Msa0838160:CDS |
| GAAGGAAAGTAGCAGCAAAG+AGG | 0.639226 | 5_4:-12512546 | None:intergenic |
| GAAAAGCAAGTCTTGCAACA+AGG | 0.640472 | 5_4:+12512844 | Msa0838160:CDS |
| GCTCACGCTTGAGTTTGCAA+TGG | 0.648419 | 5_4:+12506565 | Msa0838160:intron |
| ACTATGTGTGATGAATAACT+TGG | 0.651334 | 5_4:+12505145 | Msa0838160:CDS |
| AAGCAAGTCTTGCAACAAGG+TGG | 0.651866 | 5_4:+12512847 | Msa0838160:CDS |
| GGAGTGTGATCTTGCAACGA+AGG | 0.654551 | 5_4:+12507249 | Msa0838160:CDS |
| GCAACCTTGTACTTATCTCG+AGG | 0.657812 | 5_4:+12510662 | Msa0838160:CDS |
| TACCAGCCAATAAGGAAGAG+GGG | 0.660022 | 5_4:-12503762 | None:intergenic |
| GGCCGTCCCTAAGAATTCAG+AGG | 0.666808 | 5_4:+12506606 | Msa0838160:CDS |
| AAGCTGGTGAAGTTTCATGA+AGG | 0.667820 | 5_4:-12512564 | None:intergenic |
| GCATTAGTAGAAACTTGGAT+GGG | 0.668168 | 5_4:-12504647 | None:intergenic |
| GAAGTGAAGACCAATGATAG+GGG | 0.677877 | 5_4:+12512883 | Msa0838160:CDS |
| CTATGTGTGATGAATAACTT+GGG | 0.685471 | 5_4:+12505146 | Msa0838160:CDS |
| TGGGTGGAAACAGCACAACA+TGG | 0.685598 | 5_4:+12504487 | Msa0838160:CDS |
| GAATGCCGGAAATTGGACCA+CGG | 0.691049 | 5_4:-12504557 | None:intergenic |
| TGGCAAACGTAGTTTCACCA+GGG | 0.741921 | 5_4:+12506585 | Msa0838160:CDS |
| GAAGCCACTAGTGTACCAGG+AGG | 0.777264 | 5_4:+12506273 | Msa0838160:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCTTTTAAAAGATAAATATA+AGG | + | chr5_4:12506707-12506726 | Msa0838160:intron | 10.0% |
| !!! | GTATTAATTTTTTTTTTTTG+AGG | + | chr5_4:12506904-12506923 | Msa0838160:intron | 10.0% |
| !!! | ATTGAAGTTTTTTAAAAAAT+AGG | + | chr5_4:12507191-12507210 | Msa0838160:intron | 10.0% |
| !!! | TTGAAGTTTTTTAAAAAATA+GGG | + | chr5_4:12507192-12507211 | Msa0838160:intron | 10.0% |
| !!! | AAATTTTATATAATTTGTAG+AGG | + | chr5_4:12510298-12510317 | Msa0838160:intron | 10.0% |
| !! | TAAACTCTAATTATTAAATG+AGG | - | chr5_4:12503816-12503835 | None:intergenic | 15.0% |
| !!! | TAAACATAGTTTTAAGAAAA+AGG | + | chr5_4:12505347-12505366 | Msa0838160:intron | 15.0% |
| !!! | ATTTGGTTAAGTTATATTTT+TGG | + | chr5_4:12505837-12505856 | Msa0838160:intron | 15.0% |
| !! | CATATAAAATTAAACATTCA+AGG | - | chr5_4:12505972-12505991 | None:intergenic | 15.0% |
| !!! | CTTGAATGTTTAATTTTATA+TGG | + | chr5_4:12505970-12505989 | Msa0838160:intron | 15.0% |
| !! | AATCAAACATCATAAAAATA+TGG | - | chr5_4:12506998-12507017 | None:intergenic | 15.0% |
| !!! | TGAAGTTTTTTAAAAAATAG+GGG | + | chr5_4:12507193-12507212 | Msa0838160:intron | 15.0% |
| !! | AATCAAATATGAAATATGTA+CGG | - | chr5_4:12508622-12508641 | None:intergenic | 15.0% |
| !! | TTATTAATAGAAATTGAACT+AGG | + | chr5_4:12508672-12508691 | Msa0838160:intron | 15.0% |
| !!! | TTTGAAATTCATTTTTTTTG+AGG | + | chr5_4:12509220-12509239 | Msa0838160:intron | 15.0% |
| !! | AATTAGAAATTCATAGAATT+AGG | + | chr5_4:12509248-12509267 | Msa0838160:intron | 15.0% |
| !!! | CTTATTGTTTTTATTAACAA+AGG | - | chr5_4:12509364-12509383 | None:intergenic | 15.0% |
| !!! | ACCTTTTTAATTAATTTTCA+AGG | + | chr5_4:12510078-12510097 | Msa0838160:intron | 15.0% |
| !! | GAATATTTATAGTTATAGTA+AGG | - | chr5_4:12510233-12510252 | None:intergenic | 15.0% |
| !! | GTGAATATAATATAATTGTA+GGG | + | chr5_4:12510320-12510339 | Msa0838160:intron | 15.0% |
| !! | TGAATATAATATAATTGTAG+GGG | + | chr5_4:12510321-12510340 | Msa0838160:intron | 15.0% |
| !!! | ATAAAATTTGTAGTTGATAT+AGG | + | chr5_4:12511991-12512010 | Msa0838160:intron | 15.0% |
| !! | AAAATAACTTATAGTTTACA+TGG | + | chr5_4:12512150-12512169 | Msa0838160:intron | 15.0% |
| !! | CTTTACACTATTATAATCTT+TGG | - | chr5_4:12504040-12504059 | None:intergenic | 20.0% |
| !! | AATGAAATAACATGTTTATG+AGG | - | chr5_4:12504840-12504859 | None:intergenic | 20.0% |
| !!! | TCATAAACATGTTATTTCAT+TGG | + | chr5_4:12504839-12504858 | Msa0838160:CDS | 20.0% |
| !! | AATCAAATAGTCATGTATAT+GGG | - | chr5_4:12505319-12505338 | None:intergenic | 20.0% |
| !! | AAATCAAATAGTCATGTATA+TGG | - | chr5_4:12505320-12505339 | None:intergenic | 20.0% |
| !! | ATTGATTATTTGCAATGTAA+AGG | + | chr5_4:12505447-12505466 | Msa0838160:intron | 20.0% |
| !! | GCTGTTATTAACATATAATT+AGG | + | chr5_4:12505671-12505690 | Msa0838160:intron | 20.0% |
| !!! | TTTTTCTTCTTCTTTCTATT+TGG | + | chr5_4:12505820-12505839 | Msa0838160:intron | 20.0% |
| !!! | ACAATCAAGATTTTAAAATG+TGG | - | chr5_4:12505885-12505904 | None:intergenic | 20.0% |
| !! | TTGATTGTAAGTTTATAACT+AGG | + | chr5_4:12505897-12505916 | Msa0838160:intron | 20.0% |
| !!! | TTTTTTAAAAAATAGGGGAA+AGG | + | chr5_4:12507198-12507217 | Msa0838160:intron | 20.0% |
| !!! | TTTTTTTTGCTTTCAAACTA+TGG | - | chr5_4:12507443-12507462 | None:intergenic | 20.0% |
| !! | AGATAACCAATAACAATATT+AGG | + | chr5_4:12507716-12507735 | Msa0838160:intron | 20.0% |
| !! | TTATTATACTGCAAAAAATC+AGG | + | chr5_4:12508013-12508032 | Msa0838160:intron | 20.0% |
| !! | CAATGTAACAAAAAAATCAT+CGG | - | chr5_4:12508076-12508095 | None:intergenic | 20.0% |
| !!! | ATTTTAGTTGGAATATGTTA+TGG | + | chr5_4:12508137-12508156 | Msa0838160:intron | 20.0% |
| !!! | TTTATTGCTTTAATTTCTGT+AGG | + | chr5_4:12508523-12508542 | Msa0838160:intron | 20.0% |
| !! | AACATAAACTCAAATATTCA+TGG | + | chr5_4:12508985-12509004 | Msa0838160:intron | 20.0% |
| !! | ATTAGCAATTGATGTAAATT+AGG | + | chr5_4:12509069-12509088 | Msa0838160:intron | 20.0% |
| !! | ATATCAAATTCTATGCTATT+CGG | - | chr5_4:12509173-12509192 | None:intergenic | 20.0% |
| !!! | CAAATTTTTGTTCCTAATTT+TGG | - | chr5_4:12509204-12509223 | None:intergenic | 20.0% |
| !!! | TTGATAATACAATACAACTA+GGG | - | chr5_4:12509802-12509821 | None:intergenic | 20.0% |
| !! | TTAATTGAAAATGATCAAGA+AGG | - | chr5_4:12509825-12509844 | None:intergenic | 20.0% |
| !! | TTAATTAAAAAGGTGACAAT+GGG | - | chr5_4:12510072-12510091 | None:intergenic | 20.0% |
| !! | ATTAATTAAAAAGGTGACAA+TGG | - | chr5_4:12510073-12510092 | None:intergenic | 20.0% |
| !! | GCCTTGAAAATTAATTAAAA+AGG | - | chr5_4:12510082-12510101 | None:intergenic | 20.0% |
| !! | TATAACTATAAATATTCCGT+GGG | + | chr5_4:12510236-12510255 | Msa0838160:intron | 20.0% |
| !! | GGTGAATATAATATAATTGT+AGG | + | chr5_4:12510319-12510338 | Msa0838160:intron | 20.0% |
| !!! | GAAAAAATTCATCTTTTATC+TGG | - | chr5_4:12511082-12511101 | None:intergenic | 20.0% |
| !!! | TTTTTCTAATAGACAAAAGA+TGG | + | chr5_4:12511159-12511178 | Msa0838160:intron | 20.0% |
| !! | ATACAATATTATAAGCTAGT+AGG | + | chr5_4:12511731-12511750 | Msa0838160:intron | 20.0% |
| !!! | AACAATTTGTTTGATTACTT+TGG | + | chr5_4:12512305-12512324 | Msa0838160:intron | 20.0% |
| !! | TTGAACATGAAGAAATATAA+AGG | - | chr5_4:12512763-12512782 | None:intergenic | 20.0% |
| !! | ATAATTTTGCAGCTGAAAAA+TGG | + | chr5_4:12503471-12503490 | Msa0838160:CDS | 25.0% |
| !! | AAAGCTTTTGGTATTTTATC+AGG | + | chr5_4:12503635-12503654 | Msa0838160:CDS | 25.0% |
| ! | AACAAGCCTAAAAATTATCA+GGG | - | chr5_4:12504174-12504193 | None:intergenic | 25.0% |
| ! | AAACAAGCCTAAAAATTATC+AGG | - | chr5_4:12504175-12504194 | None:intergenic | 25.0% |
| !!! | TGATAATTTTTAGGCTTGTT+TGG | + | chr5_4:12504174-12504193 | Msa0838160:intron | 25.0% |
| ! | AATAAACTGAAAACAGCTTA+TGG | - | chr5_4:12504282-12504301 | None:intergenic | 25.0% |
| ! | ATGTGTATATTCTTGTGTAT+GGG | + | chr5_4:12504468-12504487 | Msa0838160:CDS | 25.0% |
| ! | AAATATAAAGGAACAAGAAG+TGG | - | chr5_4:12504900-12504919 | None:intergenic | 25.0% |
| ! | ACTTCTTGTTCCTTTATATT+TGG | + | chr5_4:12504899-12504918 | Msa0838160:CDS | 25.0% |
| ! | TTGAATACGACCAAATATAA+AGG | - | chr5_4:12504912-12504931 | None:intergenic | 25.0% |
| ! | AGTTGAGATTAAAAGAAAAC+CGG | + | chr5_4:12505031-12505050 | Msa0838160:CDS | 25.0% |
| ! | AAATGAACAAAGAAACATCA+TGG | - | chr5_4:12505196-12505215 | None:intergenic | 25.0% |
| ! | TCATTTCATTCATAAGCATT+TGG | + | chr5_4:12505210-12505229 | Msa0838160:CDS | 25.0% |
| ! | CATTTCATTCATAAGCATTT+GGG | + | chr5_4:12505211-12505230 | Msa0838160:CDS | 25.0% |
| ! | ATTTCATTCATAAGCATTTG+GGG | + | chr5_4:12505212-12505231 | Msa0838160:CDS | 25.0% |
| ! | AAATCTTAACTCATAGATCA+GGG | - | chr5_4:12505381-12505400 | None:intergenic | 25.0% |
| ! | AAAATCTTAACTCATAGATC+AGG | - | chr5_4:12505382-12505401 | None:intergenic | 25.0% |
| ! | TAACATATAATTAGGTCAGT+TGG | + | chr5_4:12505679-12505698 | Msa0838160:intron | 25.0% |
| ! | ACTGTTTAAAAAAACCAAAC+CGG | + | chr5_4:12505724-12505743 | Msa0838160:intron | 25.0% |
| !!! | TTGGTTTTTTTAATAGTCCT+AGG | + | chr5_4:12505856-12505875 | Msa0838160:intron | 25.0% |
| ! | TTGTAAGTTTATAACTAGGA+AGG | + | chr5_4:12505901-12505920 | Msa0838160:intron | 25.0% |
| ! | TGTAAGTTTATAACTAGGAA+GGG | + | chr5_4:12505902-12505921 | Msa0838160:intron | 25.0% |
| !! | ATTTTATATGGCAGAAAATC+AGG | + | chr5_4:12505982-12506001 | Msa0838160:intron | 25.0% |
| !!! | TATATTGGTTCAATCTTAGT+AGG | + | chr5_4:12506093-12506112 | Msa0838160:CDS | 25.0% |
| ! | ATCTTAGTAGGAATATGTTA+TGG | + | chr5_4:12506105-12506124 | Msa0838160:CDS | 25.0% |
| !!! | TTCAATATCATAAAGGTATC+CGG | - | chr5_4:12506256-12506275 | None:intergenic | 25.0% |
| !! | AGATTTTTCTCTATGTATCT+TGG | - | chr5_4:12506418-12506437 | None:intergenic | 25.0% |
| ! | ACATATTAACAATACCTATG+CGG | - | chr5_4:12506490-12506509 | None:intergenic | 25.0% |
| !! | TATAAGGTGTCATATATATG+CGG | + | chr5_4:12506723-12506742 | Msa0838160:intron | 25.0% |
| ! | GGGTATTAAAAAAAATTGGA+GGG | + | chr5_4:12506866-12506885 | Msa0838160:intron | 25.0% |
| !!! | TTTTTTTTTTTTGAGGTCCA+TGG | + | chr5_4:12506911-12506930 | Msa0838160:intron | 25.0% |
| ! | ATAAAAATATGGTGAAACTC+AGG | - | chr5_4:12506987-12507006 | None:intergenic | 25.0% |
| !! | TCATCTTGAAAATTAAGTTG+AGG | + | chr5_4:12507305-12507324 | Msa0838160:intron | 25.0% |
| ! | AACAAATAATATGAGAATCG+AGG | - | chr5_4:12507408-12507427 | None:intergenic | 25.0% |
| !! | GTTTTATCAAAAGGTTGTAA+TGG | - | chr5_4:12507621-12507640 | None:intergenic | 25.0% |
| !! | AACCTTTTGATAAAACTGAA+CGG | + | chr5_4:12507625-12507644 | Msa0838160:intron | 25.0% |
| ! | TTCTGAACAGTCATAATTAT+CGG | - | chr5_4:12507688-12507707 | None:intergenic | 25.0% |
| ! | AACAGTCCTAATATTGTTAT+TGG | - | chr5_4:12507725-12507744 | None:intergenic | 25.0% |
| !!! | TGTTCAGTTTGTTTTAATAG+TGG | + | chr5_4:12507870-12507889 | Msa0838160:intron | 25.0% |
| ! | TAATCAACTAGCTATAATCA+AGG | - | chr5_4:12507930-12507949 | None:intergenic | 25.0% |
| ! | TATAGCTAGTTGATTAAAAC+TGG | + | chr5_4:12507934-12507953 | Msa0838160:intron | 25.0% |
| ! | TAGTTGATTAAAACTGGATA+GGG | + | chr5_4:12507940-12507959 | Msa0838160:intron | 25.0% |
| ! | AACATTCAAAGTCAACAAAT+TGG | - | chr5_4:12507989-12508008 | None:intergenic | 25.0% |
| !! | TCATTGAATAATTTTGTCTC+TGG | + | chr5_4:12508228-12508247 | Msa0838160:intron | 25.0% |
| !! | ACATTAGCTTATCATAAGTT+TGG | + | chr5_4:12508857-12508876 | Msa0838160:intron | 25.0% |
| ! | TTATTCACCAAGAATATTCA+TGG | + | chr5_4:12508937-12508956 | Msa0838160:intron | 25.0% |
| !! | ATGTTGATTAGAACAGAATT+AGG | + | chr5_4:12509018-12509037 | Msa0838160:intron | 25.0% |
| ! | ATATCCATTAGTCCAAAATT+AGG | + | chr5_4:12509189-12509208 | Msa0838160:intron | 25.0% |
| ! | AAATTCATAGAATTAGGATC+AGG | + | chr5_4:12509254-12509273 | Msa0838160:intron | 25.0% |
| !! | TTTTTCTAATCCTTGGAATT+TGG | - | chr5_4:12509419-12509438 | None:intergenic | 25.0% |
| ! | TAGAAAAACAAAGGGTAAAT+AGG | + | chr5_4:12509431-12509450 | Msa0838160:intron | 25.0% |
| !! | TAAATTTTGTCATGGTCATA+TGG | - | chr5_4:12509607-12509626 | None:intergenic | 25.0% |
| ! | TAATTGTTATGCAATTGATC+AGG | - | chr5_4:12509734-12509753 | None:intergenic | 25.0% |
| !!! | GTTGATAATACAATACAACT+AGG | - | chr5_4:12509803-12509822 | None:intergenic | 25.0% |
| ! | CTATAACTATAAATATTCCG+TGG | + | chr5_4:12510235-12510254 | Msa0838160:intron | 25.0% |
| ! | ATAACTATAAATATTCCGTG+GGG | + | chr5_4:12510237-12510256 | Msa0838160:intron | 25.0% |
| ! | AGTCAAATGATAAAAAGGAA+AGG | + | chr5_4:12510263-12510282 | Msa0838160:intron | 25.0% |
| ! | AAATGATAAAAAGGAAAGGA+TGG | + | chr5_4:12510267-12510286 | Msa0838160:intron | 25.0% |
| !! | AATATAATTGTAGGGGTATA+TGG | + | chr5_4:12510328-12510347 | Msa0838160:intron | 25.0% |
| !!! | TAAAGTGATTTCTAGTTCAA+GGG | - | chr5_4:12510602-12510621 | None:intergenic | 25.0% |
| !!! | ATAAAGTGATTTCTAGTTCA+AGG | - | chr5_4:12510603-12510622 | None:intergenic | 25.0% |
| ! | TGTTAGAAGAAAATATAAGC+CGG | - | chr5_4:12510803-12510822 | None:intergenic | 25.0% |
| !! | TCGGATAAAATGTCTTTTAA+GGG | + | chr5_4:12510986-12511005 | Msa0838160:intron | 25.0% |
| !!! | TGGAAAAAGTTGATAAATGA+AGG | + | chr5_4:12511025-12511044 | Msa0838160:intron | 25.0% |
| !!! | AAAAAGTTGATAAATGAAGG+TGG | + | chr5_4:12511028-12511047 | Msa0838160:intron | 25.0% |
| !!! | GACAAAAGATGGATTAATAA+AGG | + | chr5_4:12511170-12511189 | Msa0838160:intron | 25.0% |
| !!! | AGATTTGTTCGATTACATTT+TGG | + | chr5_4:12511230-12511249 | Msa0838160:intron | 25.0% |
| !! | TAAAATCGTTGATTGTTGAA+TGG | - | chr5_4:12511518-12511537 | None:intergenic | 25.0% |
| ! | CATCAGTTACATTGTTAAAT+AGG | - | chr5_4:12511572-12511591 | None:intergenic | 25.0% |
| !!! | GAAAAAAAAAATTGCCGTTT+TGG | - | chr5_4:12511661-12511680 | None:intergenic | 25.0% |
| !!! | AACAATATACAATCGACTTT+TGG | - | chr5_4:12511771-12511790 | None:intergenic | 25.0% |
| ! | AATTCAGCTAATGATTATTC+TGG | + | chr5_4:12511889-12511908 | Msa0838160:intron | 25.0% |
| !!! | AAAATACTTTTGAGACAGTT+TGG | + | chr5_4:12512045-12512064 | Msa0838160:intron | 25.0% |
| !!! | AAATACTTTTGAGACAGTTT+GGG | + | chr5_4:12512046-12512065 | Msa0838160:intron | 25.0% |
| ! | GGAAATGTTGTATTTATCTA+AGG | - | chr5_4:12512274-12512293 | None:intergenic | 25.0% |
| ! | TAGATAAATACAACATTTCC+AGG | + | chr5_4:12512274-12512293 | Msa0838160:intron | 25.0% |
| !! | TAGATTTTCTTTTGTAGAAG+TGG | - | chr5_4:12512590-12512609 | None:intergenic | 25.0% |
| ! | TACAATAGTTGTTTATCTCT+TGG | + | chr5_4:12512648-12512667 | Msa0838160:CDS | 25.0% |
| ! | AATGAAAGAACATGTTTATG+TGG | - | chr5_4:12512691-12512710 | None:intergenic | 25.0% |
| ! | ACATAAACATGTTCTTTCAT+TGG | + | chr5_4:12512690-12512709 | Msa0838160:CDS | 25.0% |
| ! | AAATATAAAGGAACAAGAAG+CGG | - | chr5_4:12504900-12504919 | None:intergenic | 25.0% |
| !! | TGTTTTTCATTATCAAGACT+AGG | - | chr5_4:12512793-12512812 | None:intergenic | 25.0% |
| AGATGTGTTAAAGTCTCTAA+TGG | + | chr5_4:12503562-12503581 | Msa0838160:CDS | 30.0% | |
| !! | AAAGATGTTGGTAAAGCTTT+TGG | + | chr5_4:12503623-12503642 | Msa0838160:CDS | 30.0% |
| ATCATAGGAATAACTGAAGT+TGG | - | chr5_4:12503680-12503699 | None:intergenic | 30.0% | |
| ACTTCAGTTATTCCTATGAT+TGG | + | chr5_4:12503680-12503699 | Msa0838160:CDS | 30.0% | |
| ! | ATTATGGGATTCATTGGTTA+TGG | + | chr5_4:12503707-12503726 | Msa0838160:CDS | 30.0% |
| !! | AACTACACATAGTTGACTTT+TGG | - | chr5_4:12504112-12504131 | None:intergenic | 30.0% |
| ! | AACGAACCCTGATAATTTTT+AGG | + | chr5_4:12504165-12504184 | Msa0838160:intron | 30.0% |
| !! | GTTGTTTTCTTAAGCTATCT+TGG | - | chr5_4:12504319-12504338 | None:intergenic | 30.0% |
| GATGTGTATATTCTTGTGTA+TGG | + | chr5_4:12504467-12504486 | Msa0838160:intron | 30.0% | |
| !!! | ATTTCATTGGTTTTCACAGT+AGG | + | chr5_4:12504852-12504871 | Msa0838160:CDS | 30.0% |
| ! | TGTTTTTCTTTGTCAACACT+AGG | - | chr5_4:12504942-12504961 | None:intergenic | 30.0% |
| !! | TAGTGTTGACAAAGAAAAAC+AGG | + | chr5_4:12504941-12504960 | Msa0838160:CDS | 30.0% |
| ACAAAAGGTTTCAGAAGAAA+AGG | + | chr5_4:12504983-12505002 | Msa0838160:CDS | 30.0% | |
| ATTAAAAGAAAACCGGTGAT+AGG | + | chr5_4:12505038-12505057 | Msa0838160:CDS | 30.0% | |
| AGAGCATACTATCATTGAAA+TGG | + | chr5_4:12505064-12505083 | Msa0838160:CDS | 30.0% | |
| !!! | TGGTGAAAACTGTTGATTTT+TGG | + | chr5_4:12505084-12505103 | Msa0838160:CDS | 30.0% |
| !!! | GGTGAAAACTGTTGATTTTT+GGG | + | chr5_4:12505085-12505104 | Msa0838160:CDS | 30.0% |
| ACTATGTGTGATGAATAACT+TGG | + | chr5_4:12505145-12505164 | Msa0838160:CDS | 30.0% | |
| CTATGTGTGATGAATAACTT+GGG | + | chr5_4:12505146-12505165 | Msa0838160:CDS | 30.0% | |
| ATGAATAACTTGGGACAAAT+GGG | + | chr5_4:12505155-12505174 | Msa0838160:CDS | 30.0% | |
| CAAAACCTTTAACACAAGTT+AGG | - | chr5_4:12505559-12505578 | None:intergenic | 30.0% | |
| TTAGTTCGATTCAGAACTAT+AGG | - | chr5_4:12505591-12505610 | None:intergenic | 30.0% | |
| GAGTTCATGACAATTCAATT+CGG | - | chr5_4:12505790-12505809 | None:intergenic | 30.0% | |
| ATTGAATTGTCATGAACTCT+CGG | + | chr5_4:12505791-12505810 | Msa0838160:intron | 30.0% | |
| AATATATAGTGATCCTGGTA+AGG | - | chr5_4:12506079-12506098 | None:intergenic | 30.0% | |
| TTACCAGGATCACTATATAT+TGG | + | chr5_4:12506078-12506097 | Msa0838160:CDS | 30.0% | |
| CTATTTGGTCTCAAATACTA+TGG | + | chr5_4:12506165-12506184 | Msa0838160:CDS | 30.0% | |
| GAAAAGATGAATGAACCAAT+AGG | - | chr5_4:12506222-12506241 | None:intergenic | 30.0% | |
| !! | ATTGGTTCATTCATCTTTTC+TGG | + | chr5_4:12506222-12506241 | Msa0838160:CDS | 30.0% |
| TAGTGGCTTCAATATCATAA+AGG | - | chr5_4:12506263-12506282 | None:intergenic | 30.0% | |
| ! | TTGTTCTAAATGCAAGAAAC+AGG | - | chr5_4:12506383-12506402 | None:intergenic | 30.0% |
| ! | CTTTTAGGCCTATTAGAATT+AGG | - | chr5_4:12506817-12506836 | None:intergenic | 30.0% |
| CTAATTCTAATAGGCCTAAA+AGG | + | chr5_4:12506815-12506834 | Msa0838160:intron | 30.0% | |
| !! | CTGGGGGTATTAAAAAAAAT+TGG | + | chr5_4:12506862-12506881 | Msa0838160:intron | 30.0% |
| ! | GGGGTATTAAAAAAAATTGG+AGG | + | chr5_4:12506865-12506884 | Msa0838160:intron | 30.0% |
| !! | ATTTCCAACCATTTTTGTTG+CGG | - | chr5_4:12507068-12507087 | None:intergenic | 30.0% |
| ATTGATTGTTTGCACTATCA+TGG | + | chr5_4:12507536-12507555 | Msa0838160:intron | 30.0% | |
| ! | ACCTTTTGATAAAACTGAAC+GGG | + | chr5_4:12507626-12507645 | Msa0838160:intron | 30.0% |
| ! | GTCATAATTATCGGTTGTAA+TGG | - | chr5_4:12507679-12507698 | None:intergenic | 30.0% |
| CTAGTTGATTAAAACTGGAT+AGG | + | chr5_4:12507939-12507958 | Msa0838160:intron | 30.0% | |
| TTGTTACATTGCATTAGCTA+TGG | + | chr5_4:12508085-12508104 | Msa0838160:intron | 30.0% | |
| CTATTTGGACTCAAATACTT+TGG | + | chr5_4:12508176-12508195 | Msa0838160:intron | 30.0% | |
| ATATGATAGAGAGTTGGATA+AGG | + | chr5_4:12508809-12508828 | Msa0838160:intron | 30.0% | |
| ! | GGATATAATATGATAGTGAG+AGG | + | chr5_4:12508830-12508849 | Msa0838160:intron | 30.0% |
| TGTGATTCCATGAATATTCT+TGG | - | chr5_4:12508947-12508966 | None:intergenic | 30.0% | |
| ! | TGTTCCTAATTTTGGACTAA+TGG | - | chr5_4:12509196-12509215 | None:intergenic | 30.0% |
| TGATAATCAACATGTCAGAT+TGG | + | chr5_4:12509315-12509334 | Msa0838160:intron | 30.0% | |
| TCCAAGGATTAGAAAAACAA+AGG | + | chr5_4:12509422-12509441 | Msa0838160:intron | 30.0% | |
| CCAAGGATTAGAAAAACAAA+GGG | + | chr5_4:12509423-12509442 | Msa0838160:intron | 30.0% | |
| AACAAAGGGTAAATAGGTAT+TGG | + | chr5_4:12509437-12509456 | Msa0838160:intron | 30.0% | |
| ! | TCAGCTCATAAATTTTGTCA+TGG | - | chr5_4:12509615-12509634 | None:intergenic | 30.0% |
| TTTATGAAGGTCAAGTGAAA+TGG | - | chr5_4:12509640-12509659 | None:intergenic | 30.0% | |
| AACAATGTGAAGGTTTATGA+AGG | - | chr5_4:12509653-12509672 | None:intergenic | 30.0% | |
| TTAGACAGAAAACAATGTGA+AGG | - | chr5_4:12509663-12509682 | None:intergenic | 30.0% | |
| TCTGTCTAACTCAACTAATT+TGG | + | chr5_4:12509674-12509693 | Msa0838160:intron | 30.0% | |
| ! | ACAATTAATTCCCCTTTTCT+TGG | + | chr5_4:12509747-12509766 | Msa0838160:intron | 30.0% |
| AATGTAATGGTCCAAGAAAA+GGG | - | chr5_4:12509761-12509780 | None:intergenic | 30.0% | |
| TAATACAATACAACTAGGGA+AGG | - | chr5_4:12509798-12509817 | None:intergenic | 30.0% | |
| ! | AACAAAGTGTTTGGAATTTC+AGG | - | chr5_4:12509899-12509918 | None:intergenic | 30.0% |
| ! | GTGAAATAGAACAAAGTGTT+TGG | - | chr5_4:12509908-12509927 | None:intergenic | 30.0% |
| !!! | CGCGAATAATTTTGTTTTTG+TGG | - | chr5_4:12510108-12510127 | None:intergenic | 30.0% |
| CAAAAACAAAATTATTCGCG+AGG | + | chr5_4:12510108-12510127 | Msa0838160:intron | 30.0% | |
| ! | TCTTAGTTCTCCAAAGAATT+GGG | - | chr5_4:12510152-12510171 | None:intergenic | 30.0% |
| ! | ATCTTAGTTCTCCAAAGAAT+TGG | - | chr5_4:12510153-12510172 | None:intergenic | 30.0% |
| GGTGAAGTCAAATGATAAAA+AGG | + | chr5_4:12510258-12510277 | Msa0838160:intron | 30.0% | |
| CTCCATTACAATTACAATAC+AGG | + | chr5_4:12510370-12510389 | Msa0838160:intron | 30.0% | |
| TTAGGGTTTAATATGTTGCT+GGG | - | chr5_4:12510411-12510430 | None:intergenic | 30.0% | |
| ! | TTTAGGGTTTAATATGTTGC+TGG | - | chr5_4:12510412-12510431 | None:intergenic | 30.0% |
| AATATTTCTCGAGAAAACGA+GGG | - | chr5_4:12510463-12510482 | None:intergenic | 30.0% | |
| AAATATTTCTCGAGAAAACG+AGG | - | chr5_4:12510464-12510483 | None:intergenic | 30.0% | |
| !! | TTATGAAGATAAAGTGTTGG+AGG | - | chr5_4:12510516-12510535 | None:intergenic | 30.0% |
| !! | GCATTGATGTTTTTCTAAGT+TGG | + | chr5_4:12510916-12510935 | Msa0838160:intron | 30.0% |
| ATTCCTTTGATTAAAAGCTG+TGG | + | chr5_4:12510945-12510964 | Msa0838160:intron | 30.0% | |
| ! | TAACCACAGCTTTTAATCAA+AGG | - | chr5_4:12510951-12510970 | None:intergenic | 30.0% |
| GTTACAAAGTTTCTATCTGT+CGG | + | chr5_4:12510967-12510986 | Msa0838160:intron | 30.0% | |
| ! | GTCGGATAAAATGTCTTTTA+AGG | + | chr5_4:12510985-12511004 | Msa0838160:intron | 30.0% |
| ! | TTGACTTCATGATTTGTGAA+TGG | + | chr5_4:12511307-12511326 | Msa0838160:intron | 30.0% |
| AAAAAGTCTAATCAAAGCAC+CGG | - | chr5_4:12511460-12511479 | None:intergenic | 30.0% | |
| CATAAAGAAAGCTAGTAAAC+TGG | - | chr5_4:12511617-12511636 | None:intergenic | 30.0% | |
| ACACAATACTACATACATAG+TGG | - | chr5_4:12511686-12511705 | None:intergenic | 30.0% | |
| GTATGTAGTATTGTGTAGAA+TGG | + | chr5_4:12511690-12511709 | Msa0838160:intron | 30.0% | |
| CAATATTATAAGCTAGTAGG+TGG | + | chr5_4:12511734-12511753 | Msa0838160:intron | 30.0% | |
| TTTCCATTACTTGGGTAAAA+GGG | + | chr5_4:12511807-12511826 | Msa0838160:intron | 30.0% | |
| ! | TCTCAAATCTTGAGTTTTAC+CGG | + | chr5_4:12511855-12511874 | Msa0838160:intron | 30.0% |
| TTGATATAGGCCTATTTGAA+TGG | + | chr5_4:12512004-12512023 | Msa0838160:intron | 30.0% | |
| !!! | AATACTTTTGAGACAGTTTG+GGG | + | chr5_4:12512047-12512066 | Msa0838160:intron | 30.0% |
| ! | TATTTATCTAAGGCTCTGTT+TGG | - | chr5_4:12512264-12512283 | None:intergenic | 30.0% |
| !!! | ACAAATTGTTTTTGAAGTCC+TGG | - | chr5_4:12512295-12512314 | None:intergenic | 30.0% |
| ATGTGTGTATTCTTACGTAT+GGG | + | chr5_4:12512341-12512360 | Msa0838160:intron | 30.0% | |
| AGAAACTTTCCAAAAAATCG+TGG | + | chr5_4:12512413-12512432 | Msa0838160:intron | 30.0% | |
| ATTATAGCAGGAACATAGAT+GGG | - | chr5_4:12512523-12512542 | None:intergenic | 30.0% | |
| AATTATAGCAGGAACATAGA+TGG | - | chr5_4:12512524-12512543 | None:intergenic | 30.0% | |
| !!! | CTTTCATTGGTTTTCACAAT+AGG | + | chr5_4:12512703-12512722 | Msa0838160:CDS | 30.0% |
| ACATATTGCTTGTACCCATA+TGG | - | chr5_4:12503513-12503532 | None:intergenic | 35.0% | |
| ATATGGGTACAAGCAATATG+TGG | + | chr5_4:12503512-12503531 | Msa0838160:CDS | 35.0% | |
| !! | TCCTATGATTGGTGCTATTA+TGG | + | chr5_4:12503691-12503710 | Msa0838160:CDS | 35.0% |
| !! | CCTATGATTGGTGCTATTAT+GGG | + | chr5_4:12503692-12503711 | Msa0838160:CDS | 35.0% |
| GTTATGTTTACCAGCCAATA+AGG | - | chr5_4:12503773-12503792 | None:intergenic | 35.0% | |
| ! | TACACACCATGATTTGTGAA+TGG | - | chr5_4:12503878-12503897 | None:intergenic | 35.0% |
| CTTTGCTCTGACTTTAAATG+AGG | - | chr5_4:12503988-12504007 | None:intergenic | 35.0% | |
| TAAGAGCTTGTGAAACTGTT+TGG | + | chr5_4:12504226-12504245 | Msa0838160:intron | 35.0% | |
| AAGAGCTTGTGAAACTGTTT+GGG | + | chr5_4:12504227-12504246 | Msa0838160:intron | 35.0% | |
| TGTATATTCTTGTGTATGGG+TGG | + | chr5_4:12504471-12504490 | Msa0838160:CDS | 35.0% | |
| AGAAACTTTCCAAAAAACCG+TGG | + | chr5_4:12504540-12504559 | Msa0838160:CDS | 35.0% | |
| !! | TACATAACCCTTTAGAATGC+CGG | - | chr5_4:12504574-12504593 | None:intergenic | 35.0% |
| GCATTAGTAGAAACTTGGAT+GGG | - | chr5_4:12504650-12504669 | None:intergenic | 35.0% | |
| AGCATTAGTAGAAACTTGGA+TGG | - | chr5_4:12504651-12504670 | None:intergenic | 35.0% | |
| TGTGAGCATTAGTAGAAACT+TGG | - | chr5_4:12504655-12504674 | None:intergenic | 35.0% | |
| !!! | CGTCTCTTTATTTTCTTCTG+TGG | - | chr5_4:12504745-12504764 | None:intergenic | 35.0% |
| TACAGTAGCTGTTTATCTCT+TGG | + | chr5_4:12504797-12504816 | Msa0838160:CDS | 35.0% | |
| AATCTCAACTTCTTCTACGT+TGG | - | chr5_4:12505021-12505040 | None:intergenic | 35.0% | |
| !! | TTGTTTGTGTCATTTCTCTG+TGG | + | chr5_4:12505110-12505129 | Msa0838160:CDS | 35.0% |
| GATGAATAACTTGGGACAAA+TGG | + | chr5_4:12505154-12505173 | Msa0838160:CDS | 35.0% | |
| ! | ATAAGCATTTGGGGTTTCTT+TGG | + | chr5_4:12505221-12505240 | Msa0838160:CDS | 35.0% |
| TGAACAAACAGCAATGACTA+GGG | - | chr5_4:12505293-12505312 | None:intergenic | 35.0% | |
| TTGAACAAACAGCAATGACT+AGG | - | chr5_4:12505294-12505313 | None:intergenic | 35.0% | |
| TGTCAATGCAATGACAGTTT+AGG | + | chr5_4:12505404-12505423 | Msa0838160:intron | 35.0% | |
| ! | CTGAACCTAACTTGTGTTAA+AGG | + | chr5_4:12505551-12505570 | Msa0838160:intron | 35.0% |
| ATGAACTATCCATCACAGTT+TGG | - | chr5_4:12505755-12505774 | None:intergenic | 35.0% | |
| !!! | ATTTTAAAATGTGGTCGCCT+AGG | - | chr5_4:12505876-12505895 | None:intergenic | 35.0% |
| TCTCAGATTCTGATGTTCTT+TGG | + | chr5_4:12506033-12506052 | Msa0838160:CDS | 35.0% | |
| GTTCTTTGGTTACATTGCAT+TGG | + | chr5_4:12506047-12506066 | Msa0838160:CDS | 35.0% | |
| GAACCAATATATAGTGATCC+TGG | - | chr5_4:12506084-12506103 | None:intergenic | 35.0% | |
| CAATAGGAAGGTTAAGAATG+AGG | - | chr5_4:12506206-12506225 | None:intergenic | 35.0% | |
| CTCATTCTTAACCTTCCTAT+TGG | + | chr5_4:12506204-12506223 | Msa0838160:CDS | 35.0% | |
| AGATGAATGAACCAATAGGA+AGG | - | chr5_4:12506218-12506237 | None:intergenic | 35.0% | |
| CATGCTTGTGTATGTGATTA+TGG | + | chr5_4:12506326-12506345 | Msa0838160:CDS | 35.0% | |
| !!! | TTCTGGAATTTTTTCCGCAT+AGG | + | chr5_4:12506473-12506492 | Msa0838160:intron | 35.0% |
| !!! | GAGTTGTTTTTGTGCTTGTT+TGG | + | chr5_4:12506528-12506547 | Msa0838160:intron | 35.0% |
| CAAGAGGACCTAATTCTAAT+AGG | + | chr5_4:12506806-12506825 | Msa0838160:intron | 35.0% | |
| TAAAACAAGGGGACAGAAAA+AGG | + | chr5_4:12506839-12506858 | Msa0838160:intron | 35.0% | |
| AGGATACAAGATTGAAGTGA+TGG | + | chr5_4:12507134-12507153 | Msa0838160:intron | 35.0% | |
| TACAAGATTGAAGTGATGGT+TGG | + | chr5_4:12507138-12507157 | Msa0838160:intron | 35.0% | |
| ACAAGATTGAAGTGATGGTT+GGG | + | chr5_4:12507139-12507158 | Msa0838160:intron | 35.0% | |
| AAAGGTTATGCCACATAAGA+TGG | + | chr5_4:12507216-12507235 | Msa0838160:CDS | 35.0% | |
| !! | TTAAGTTGAGGCAAAGATGT+TGG | + | chr5_4:12507317-12507336 | Msa0838160:intron | 35.0% |
| AAGTATGTGACAGCGATTTA+AGG | + | chr5_4:12507463-12507482 | Msa0838160:intron | 35.0% | |
| TTGTAATGGTTCAGTTTGGT+CGG | - | chr5_4:12507607-12507626 | None:intergenic | 35.0% | |
| AAGGTTGTAATGGTTCAGTT+TGG | - | chr5_4:12507611-12507630 | None:intergenic | 35.0% | |
| !! | TCCCGTTCAGTTTTATCAAA+AGG | - | chr5_4:12507630-12507649 | None:intergenic | 35.0% |
| AACCGAAAAGAATAGAACTG+TGG | + | chr5_4:12507762-12507781 | Msa0838160:intron | 35.0% | |
| ! | TGCCACAGTTCTATTCTTTT+CGG | - | chr5_4:12507767-12507786 | None:intergenic | 35.0% |
| TTACTGGGATCACTATACAT+CGG | + | chr5_4:12508110-12508129 | Msa0838160:intron | 35.0% | |
| !!! | TACATCGGCTCAATTTTAGT+TGG | + | chr5_4:12508125-12508144 | Msa0838160:intron | 35.0% |
| GTTCGTCGTTCAAAACTATT+TGG | + | chr5_4:12508161-12508180 | Msa0838160:intron | 35.0% | |
| TGTGTATGCACGAACATAAA+CGG | + | chr5_4:12508316-12508335 | Msa0838160:intron | 35.0% | |
| AAAAGCTGGTGTTTACGTAT+TGG | + | chr5_4:12508343-12508362 | Msa0838160:intron | 35.0% | |
| ! | TCAGCATCAAATTTTCGACT+TGG | - | chr5_4:12508391-12508410 | None:intergenic | 35.0% |
| ! | CTTTTCTATCGTACAAGCAA+TGG | + | chr5_4:12508411-12508430 | Msa0838160:intron | 35.0% |
| !! | TGGTTGGTGAATAGTTTGTT+TGG | - | chr5_4:12508736-12508755 | None:intergenic | 35.0% |
| ATCCTATCATATGCACCAAA+CGG | - | chr5_4:12508780-12508799 | None:intergenic | 35.0% | |
| GACATGATATGATAGAGAGT+TGG | + | chr5_4:12508803-12508822 | Msa0838160:intron | 35.0% | |
| GACATCAAATTGATGTCGAT+TGG | + | chr5_4:12509102-12509121 | Msa0838160:intron | 35.0% | |
| ! | AGCGTGATGTTTTTCTTATC+AGG | + | chr5_4:12509382-12509401 | Msa0838160:intron | 35.0% |
| TCTAATCCTTGGAATTTGGT+GGG | - | chr5_4:12509415-12509434 | None:intergenic | 35.0% | |
| TTCTAATCCTTGGAATTTGG+TGG | - | chr5_4:12509416-12509435 | None:intergenic | 35.0% | |
| !!! | CCCTTTGTTTTTCTAATCCT+TGG | - | chr5_4:12509426-12509445 | None:intergenic | 35.0% |
| TCCTTATCATGTGCACTAAA+CGG | + | chr5_4:12509512-12509531 | Msa0838160:intron | 35.0% | |
| ! | TCATGGTCATATGGAGTTTT+TGG | - | chr5_4:12509598-12509617 | None:intergenic | 35.0% |
| ATGTAATGGTCCAAGAAAAG+GGG | - | chr5_4:12509760-12509779 | None:intergenic | 35.0% | |
| GAATGTAATGGTCCAAGAAA+AGG | - | chr5_4:12509762-12509781 | None:intergenic | 35.0% | |
| !! | AATTGGTTTGGTGAATGCAT+GGG | - | chr5_4:12509871-12509890 | None:intergenic | 35.0% |
| ! | AGTGTTTGGAATTTCAGGAA+GGG | - | chr5_4:12509894-12509913 | None:intergenic | 35.0% |
| ! | AAGTGTTTGGAATTTCAGGA+AGG | - | chr5_4:12509895-12509914 | None:intergenic | 35.0% |
| GGCCTGTATTGTAATTGTAA+TGG | - | chr5_4:12510375-12510394 | None:intergenic | 35.0% | |
| TTACAATTACAATACAGGCC+CGG | + | chr5_4:12510375-12510394 | Msa0838160:intron | 35.0% | |
| GGGTTATGAAGATAAAGTGT+TGG | - | chr5_4:12510519-12510538 | None:intergenic | 35.0% | |
| ! | TTTTCCTCGAGATAAGTACA+AGG | - | chr5_4:12510669-12510688 | None:intergenic | 35.0% |
| AGCTGTGGAATGTTATTCTT+TGG | + | chr5_4:12510699-12510718 | Msa0838160:CDS | 35.0% | |
| GCTGTGGAATGTTATTCTTT+GGG | + | chr5_4:12510700-12510719 | Msa0838160:CDS | 35.0% | |
| ! | AATGTCTTCGTCATTTGCTA+CGG | + | chr5_4:12510872-12510891 | Msa0838160:intron | 35.0% |
| !!! | GTTCGATTACATTTTGGCTA+AGG | + | chr5_4:12511236-12511255 | Msa0838160:intron | 35.0% |
| ACAATGTAACTGATGTGTGA+CGG | + | chr5_4:12511577-12511596 | Msa0838160:intron | 35.0% | |
| AAAGAAAGCTAGTAAACTGG+TGG | - | chr5_4:12511614-12511633 | None:intergenic | 35.0% | |
| CTTTCTTTATGCGATTGATG+TGG | + | chr5_4:12511626-12511645 | Msa0838160:intron | 35.0% | |
| !!! | AAAAAAATTGCCGTTTTGGC+TGG | - | chr5_4:12511657-12511676 | None:intergenic | 35.0% |
| TGTCTCAACTTTCCATTACT+TGG | + | chr5_4:12511798-12511817 | Msa0838160:intron | 35.0% | |
| GTCTCAACTTTCCATTACTT+GGG | + | chr5_4:12511799-12511818 | Msa0838160:intron | 35.0% | |
| CTTTCCATTACTTGGGTAAA+AGG | + | chr5_4:12511806-12511825 | Msa0838160:intron | 35.0% | |
| ! | TTACCCTTTTACCCAAGTAA+TGG | - | chr5_4:12511813-12511832 | None:intergenic | 35.0% |
| ! | CTCAAATCTTGAGTTTTACC+GGG | + | chr5_4:12511856-12511875 | Msa0838160:intron | 35.0% |
| GTATAGAAGGCCATTCAAAT+AGG | - | chr5_4:12512017-12512036 | None:intergenic | 35.0% | |
| ! | ATTTTGCCAGTAGGTATAGA+AGG | - | chr5_4:12512030-12512049 | None:intergenic | 35.0% |
| !!! | CTCAAAAGTATTTTGCCAGT+AGG | - | chr5_4:12512039-12512058 | None:intergenic | 35.0% |
| ACACTGTCATATAGAGCTTA+TGG | - | chr5_4:12512127-12512146 | None:intergenic | 35.0% | |
| CATGTGTGTATTCTTACGTA+TGG | + | chr5_4:12512340-12512359 | Msa0838160:intron | 35.0% | |
| !!! | GAAATTGGACCACGATTTTT+TGG | - | chr5_4:12512425-12512444 | None:intergenic | 35.0% |
| AAAAATCGTGGTCCAATTTC+TGG | + | chr5_4:12512425-12512444 | Msa0838160:intron | 35.0% | |
| !! | TCCAATTTCTGGCATTCTAA+AGG | + | chr5_4:12512436-12512455 | Msa0838160:intron | 35.0% |
| !! | CCAATTTCTGGCATTCTAAA+GGG | + | chr5_4:12512437-12512456 | Msa0838160:intron | 35.0% |
| AAATAGAGCAGTGCATATGT+CGG | - | chr5_4:12512492-12512511 | None:intergenic | 35.0% | |
| ACAGATTCATGAACCTTTGT+TGG | + | chr5_4:12512810-12512829 | Msa0838160:CDS | 35.0% | |
| ! | TCAATCTTTTGTGCCAACAA+AGG | - | chr5_4:12512826-12512845 | None:intergenic | 35.0% |
| TTGAAGTGAAGACCAATGAT+AGG | + | chr5_4:12512881-12512900 | Msa0838160:CDS | 35.0% | |
| TGAAGTGAAGACCAATGATA+GGG | + | chr5_4:12512882-12512901 | Msa0838160:CDS | 35.0% | |
| TTTGCAGCTGAAAAATGGCT+AGG | + | chr5_4:12503476-12503495 | Msa0838160:CDS | 40.0% | |
| TAGGATTTGTGACAGCCATA+TGG | + | chr5_4:12503495-12503514 | Msa0838160:CDS | 40.0% | |
| AGGATTTGTGACAGCCATAT+GGG | + | chr5_4:12503496-12503515 | Msa0838160:CDS | 40.0% | |
| CTCTCTGTTGCTAAAGATGT+TGG | + | chr5_4:12503611-12503630 | Msa0838160:CDS | 40.0% | |
| CCCATAATAGCACCAATCAT+AGG | - | chr5_4:12503695-12503714 | None:intergenic | 40.0% | |
| !! | GGTGCTATTATGGGATTCAT+TGG | + | chr5_4:12503701-12503720 | Msa0838160:CDS | 40.0% |
| ! | TCATTGGTTATGGAGCTCAA+TGG | + | chr5_4:12503717-12503736 | Msa0838160:CDS | 40.0% |
| TTACCAGCCAATAAGGAAGA+GGG | - | chr5_4:12503766-12503785 | None:intergenic | 40.0% | |
| TTTACCAGCCAATAAGGAAG+AGG | - | chr5_4:12503767-12503786 | None:intergenic | 40.0% | |
| AACCTGCCATTCACAAATCA+TGG | + | chr5_4:12503869-12503888 | Msa0838160:intron | 40.0% | |
| ! | CATTCGGAATAGTCGATTCT+TGG | - | chr5_4:12503937-12503956 | None:intergenic | 40.0% |
| CAAGAATCGACTATTCCGAA+TGG | + | chr5_4:12503935-12503954 | Msa0838160:intron | 40.0% | |
| TCTTAACTCTCCGATTCCTA+AGG | + | chr5_4:12504140-12504159 | Msa0838160:intron | 40.0% | |
| ! | GGTTCGTTTTCCTTAGGAAT+CGG | - | chr5_4:12504153-12504172 | None:intergenic | 40.0% |
| ! | TATCAGGGTTCGTTTTCCTT+AGG | - | chr5_4:12504159-12504178 | None:intergenic | 40.0% |
| AAACTGTTTGGGAGAGCTTA+GGG | + | chr5_4:12504238-12504257 | Msa0838160:intron | 40.0% | |
| !!! | GAAATTGGACCACGGTTTTT+TGG | - | chr5_4:12504552-12504571 | None:intergenic | 40.0% |
| AAAAACCGTGGTCCAATTTC+CGG | + | chr5_4:12504552-12504571 | Msa0838160:CDS | 40.0% | |
| TCCAATTTCCGGCATTCTAA+AGG | + | chr5_4:12504563-12504582 | Msa0838160:CDS | 40.0% | |
| CCAATTTCCGGCATTCTAAA+GGG | + | chr5_4:12504564-12504583 | Msa0838160:CDS | 40.0% | |
| ! | GGCATTCTAAAGGGTTATGT+AGG | + | chr5_4:12504573-12504592 | Msa0838160:CDS | 40.0% |
| CTCTTGGCATTTGATATCTC+TGG | + | chr5_4:12504813-12504832 | Msa0838160:CDS | 40.0% | |
| CAAGAAGTGGCATAGCTAAT+AGG | - | chr5_4:12504887-12504906 | None:intergenic | 40.0% | |
| ACAGGTTCATGAACCTTTGT+TGG | + | chr5_4:12504959-12504978 | Msa0838160:CDS | 40.0% | |
| TGAACCTTTGTTGGCACAAA+AGG | + | chr5_4:12504968-12504987 | Msa0838160:CDS | 40.0% | |
| ! | GAAACCTTTTGTGCCAACAA+AGG | - | chr5_4:12504975-12504994 | None:intergenic | 40.0% |
| TTCTTTGGACGCATTCTTTC+TGG | + | chr5_4:12505236-12505255 | Msa0838160:CDS | 40.0% | |
| CACTCTCTGAATACTACATC+AGG | + | chr5_4:12505261-12505280 | Msa0838160:CDS | 40.0% | |
| CACTAGGACTGTTTATGGTT+CGG | + | chr5_4:12505478-12505497 | Msa0838160:intron | 40.0% | |
| !! | GTTTATGGTTCGGTTCAAGA+AGG | + | chr5_4:12505488-12505507 | Msa0838160:intron | 40.0% |
| ! | TGGTTACATTGCATTGGCAA+TGG | + | chr5_4:12506053-12506072 | Msa0838160:CDS | 40.0% |
| !! | ATCTTTTCTGGTCTCATTGC+CGG | + | chr5_4:12506234-12506253 | Msa0838160:CDS | 40.0% |
| TATGGCTTTCGCTTGTGTAT+TGG | + | chr5_4:12506344-12506363 | Msa0838160:CDS | 40.0% | |
| ATGGCTTTCGCTTGTGTATT+GGG | + | chr5_4:12506345-12506364 | Msa0838160:CDS | 40.0% | |
| ACACTGAGATGATGTGTTTC+TGG | + | chr5_4:12506456-12506475 | Msa0838160:intron | 40.0% | |
| !! | TGCTTGTTTGGCTCTATTGT+GGG | + | chr5_4:12506540-12506559 | Msa0838160:intron | 40.0% |
| TATATATGCGGTACACCCAA+AGG | + | chr5_4:12506735-12506754 | Msa0838160:intron | 40.0% | |
| !! | CGGTAGTCATTTTCACCTTT+GGG | - | chr5_4:12506753-12506772 | None:intergenic | 40.0% |
| !! | ACGGTAGTCATTTTCACCTT+TGG | - | chr5_4:12506754-12506773 | None:intergenic | 40.0% |
| GTGGGGGTTATTCATGTATA+CGG | - | chr5_4:12506773-12506792 | None:intergenic | 40.0% | |
| !!! | TCTTGCTTTTGGTGTTAGGT+GGG | - | chr5_4:12506791-12506810 | None:intergenic | 40.0% |
| ! | GAATTAGGTCCTCTTGCTTT+TGG | - | chr5_4:12506802-12506821 | None:intergenic | 40.0% |
| AGGCCTAAAAGGCTAAAACA+AGG | + | chr5_4:12506826-12506845 | Msa0838160:intron | 40.0% | |
| GGCCTAAAAGGCTAAAACAA+GGG | + | chr5_4:12506827-12506846 | Msa0838160:intron | 40.0% | |
| GCCTAAAAGGCTAAAACAAG+GGG | + | chr5_4:12506828-12506847 | Msa0838160:intron | 40.0% | |
| !!! | TCCCCTTGTTTTAGCCTTTT+AGG | - | chr5_4:12506832-12506851 | None:intergenic | 40.0% |
| GCAAACAGTTCAATAGAGCT+GGG | - | chr5_4:12506947-12506966 | None:intergenic | 40.0% | |
| TGCAAACAGTTCAATAGAGC+TGG | - | chr5_4:12506948-12506967 | None:intergenic | 40.0% | |
| ATCAGAACTAAAACTACGCG+CGG | + | chr5_4:12507086-12507105 | Msa0838160:intron | 40.0% | |
| TTCAATCTTGTATCCTGCCT+AGG | - | chr5_4:12507130-12507149 | None:intergenic | 40.0% | |
| CAAGATTGAAGTGATGGTTG+GGG | + | chr5_4:12507140-12507159 | Msa0838160:intron | 40.0% | |
| GATGTTGGATGCATTCTTTC+TGG | + | chr5_4:12507332-12507351 | Msa0838160:intron | 40.0% | |
| TATCTCTGCAGCTGTAGATT+AGG | + | chr5_4:12507493-12507512 | Msa0838160:intron | 40.0% | |
| ! | GTTTGCACTATCATGGATTG+CGG | + | chr5_4:12507543-12507562 | Msa0838160:intron | 40.0% |
| ! | CGCTACTTTAGTACGTGAAT+TGG | + | chr5_4:12507823-12507842 | Msa0838160:intron | 40.0% |
| !!! | GGTTTTAAATAGTCGTCGCT+AGG | - | chr5_4:12507909-12507928 | None:intergenic | 40.0% |
| ! | TGCATTAGCTATGGCTTTAC+TGG | + | chr5_4:12508094-12508113 | Msa0838160:intron | 40.0% |
| ! | GCATTAGCTATGGCTTTACT+GGG | + | chr5_4:12508095-12508114 | Msa0838160:intron | 40.0% |
| ! | ACATAAACGGTGTCAAAAGC+TGG | + | chr5_4:12508329-12508348 | Msa0838160:intron | 40.0% |
| ACTGTATTTGCCAGTAAGTG+AGG | + | chr5_4:12508577-12508596 | Msa0838160:intron | 40.0% | |
| CTGTATTTGCCAGTAAGTGA+GGG | + | chr5_4:12508578-12508597 | Msa0838160:intron | 40.0% | |
| TCCTATCATATGCACCAAAC+GGG | - | chr5_4:12508779-12508798 | None:intergenic | 40.0% | |
| !! | ACCAAACAGTGGATTGGATT+AGG | + | chr5_4:12509463-12509482 | Msa0838160:intron | 40.0% |
| TCCTAATCCAATCCACTGTT+TGG | - | chr5_4:12509467-12509486 | None:intergenic | 40.0% | |
| AGTGCACATGATAAGGAGAT+AGG | - | chr5_4:12509509-12509528 | None:intergenic | 40.0% | |
| TCCGTTTAGTGCACATGATA+AGG | - | chr5_4:12509516-12509535 | None:intergenic | 40.0% | |
| TTGTGCTATACTCAGACCAT+CGG | - | chr5_4:12509541-12509560 | None:intergenic | 40.0% | |
| TCTTGCACACACAACATGTT+TGG | + | chr5_4:12509699-12509718 | Msa0838160:intron | 40.0% | |
| GGAGAAGGTCAAGAATGTAA+TGG | - | chr5_4:12509774-12509793 | None:intergenic | 40.0% | |
| TACAATACAACTAGGGAAGG+AGG | - | chr5_4:12509795-12509814 | None:intergenic | 40.0% | |
| !! | ATTGGTTTGGTGAATGCATG+GGG | - | chr5_4:12509870-12509889 | None:intergenic | 40.0% |
| !! | GAATTGGTTTGGTGAATGCA+TGG | - | chr5_4:12509872-12509891 | None:intergenic | 40.0% |
| TTTCAGGAAGGGAATTGGTT+TGG | - | chr5_4:12509883-12509902 | None:intergenic | 40.0% | |
| TGGAATTTCAGGAAGGGAAT+TGG | - | chr5_4:12509888-12509907 | None:intergenic | 40.0% | |
| ATGCTAAGACACATCTAGTG+AGG | - | chr5_4:12509934-12509953 | None:intergenic | 40.0% | |
| ! | TTGCTTGCTACCCAATTCTT+TGG | + | chr5_4:12510139-12510158 | Msa0838160:intron | 40.0% |
| ! | TATCATTTGACTTCACCCCA+CGG | - | chr5_4:12510255-12510274 | None:intergenic | 40.0% |
| AATACAGGCCCGGTAAAAAA+TGG | + | chr5_4:12510385-12510404 | Msa0838160:intron | 40.0% | |
| AAAGCGAGTGAGGGAATTTA+GGG | - | chr5_4:12510428-12510447 | None:intergenic | 40.0% | |
| AGAATAACATTCCACAGCTC+TGG | - | chr5_4:12510698-12510717 | None:intergenic | 40.0% | |
| ! | ATGTCTTCGTCATTTGCTAC+GGG | + | chr5_4:12510873-12510892 | Msa0838160:intron | 40.0% |
| AGGGAAGAAAAGAGAATTCG+TGG | + | chr5_4:12511005-12511024 | Msa0838160:intron | 40.0% | |
| AGTAACACTAACGCATTCAC+CGG | + | chr5_4:12511438-12511457 | Msa0838160:intron | 40.0% | |
| ! | GCTGAATTTTACATGTCTCC+CGG | - | chr5_4:12511877-12511896 | None:intergenic | 40.0% |
| TGTGTATTCTTACGTATGGG+AGG | + | chr5_4:12512344-12512363 | Msa0838160:intron | 40.0% | |
| TGGGAGGAAACAACATAACA+TGG | + | chr5_4:12512360-12512379 | Msa0838160:intron | 40.0% | |
| !! | CCCTTTAGAATGCCAGAAAT+TGG | - | chr5_4:12512440-12512459 | None:intergenic | 40.0% |
| ! | GGCATTCTAAAGGGTAATGT+AGG | + | chr5_4:12512446-12512465 | Msa0838160:intron | 40.0% |
| GCAAAGAGGCAAATTATAGC+AGG | - | chr5_4:12512535-12512554 | None:intergenic | 40.0% | |
| AAGCTGGTGAAGTTTCATGA+AGG | - | chr5_4:12512567-12512586 | None:intergenic | 40.0% | |
| ! | TCTTTTGTAGAAGTGGAAGC+TGG | - | chr5_4:12512583-12512602 | None:intergenic | 40.0% |
| CTCTTGGCATTTGATATCTC+TGG | + | chr5_4:12504813-12504832 | Msa0838160:CDS | 40.0% | |
| GAAAAGCAAGTCTTGCAACA+AGG | + | chr5_4:12512844-12512863 | Msa0838160:CDS | 40.0% | |
| GAAGTGAAGACCAATGATAG+GGG | + | chr5_4:12512883-12512902 | Msa0838160:CDS | 40.0% | |
| !! | CAGGTCTTGTTTCTGATCGT+TGG | + | chr5_4:12503654-12503673 | Msa0838160:CDS | 45.0% |
| AAGGAAGAGGGGCTATTCTT+TGG | - | chr5_4:12503754-12503773 | None:intergenic | 45.0% | |
| GAATAGCCCCTCTTCCTTAT+TGG | + | chr5_4:12503756-12503775 | Msa0838160:CDS | 45.0% | |
| TACCAGCCAATAAGGAAGAG+GGG | - | chr5_4:12503765-12503784 | None:intergenic | 45.0% | |
| ! | CACCATGATTTGTGAATGGC+AGG | - | chr5_4:12503874-12503893 | None:intergenic | 45.0% |
| GAAACTGTTTGGGAGAGCTT+AGG | + | chr5_4:12504237-12504256 | Msa0838160:intron | 45.0% | |
| !! | CCCTTTAGAATGCCGGAAAT+TGG | - | chr5_4:12504567-12504586 | None:intergenic | 45.0% |
| TAGAAACTTGGATGGGTCTG+AGG | - | chr5_4:12504643-12504662 | None:intergenic | 45.0% | |
| GCAATGAGACAAATGACAGC+AGG | - | chr5_4:12504684-12504703 | None:intergenic | 45.0% | |
| AAGCTGGTGGAGTTTCATGA+AGG | - | chr5_4:12504716-12504735 | None:intergenic | 45.0% | |
| TCTTCTGTGGAAGTTGAAGC+TGG | - | chr5_4:12504732-12504751 | None:intergenic | 45.0% | |
| GTATGCTCTTCACCTATCAC+CGG | - | chr5_4:12505053-12505072 | None:intergenic | 45.0% | |
| !! | GTGTCATTTCTCTGTGGTGT+TGG | + | chr5_4:12505116-12505135 | Msa0838160:CDS | 45.0% |
| ! | TTTCTCTGTGGTGTTGGAAC+AGG | + | chr5_4:12505122-12505141 | Msa0838160:CDS | 45.0% |
| TAACTTGGGACAAATGGGAC+AGG | + | chr5_4:12505160-12505179 | Msa0838160:CDS | 45.0% | |
| CGAACCATAAACAGTCCTAG+TGG | - | chr5_4:12505480-12505499 | None:intergenic | 45.0% | |
| !! | ACAGTTTGGTTCTTCCGGTT+TGG | - | chr5_4:12505741-12505760 | None:intergenic | 45.0% |
| !! | CCATCACAGTTTGGTTCTTC+CGG | - | chr5_4:12505746-12505765 | None:intergenic | 45.0% |
| GCTGCATTCCAAACTAACCT+TGG | - | chr5_4:12506012-12506031 | None:intergenic | 45.0% | |
| !! | AATAGTTCTGAAGCTGCTGC+TGG | - | chr5_4:12506150-12506169 | None:intergenic | 45.0% |
| GCAGCAGCTTCAGAACTATT+TGG | + | chr5_4:12506150-12506169 | Msa0838160:CDS | 45.0% | |
| ATTGAAGCCACTAGTGTACC+AGG | + | chr5_4:12506270-12506289 | Msa0838160:CDS | 45.0% | |
| TGGCTTTCGCTTGTGTATTG+GGG | + | chr5_4:12506346-12506365 | Msa0838160:CDS | 45.0% | |
| TTGTGTATTGGGGTGTGGAT+TGG | + | chr5_4:12506356-12506375 | Msa0838160:CDS | 45.0% | |
| !! | GTGCTTGTTTGGCTCTATTG+TGG | + | chr5_4:12506539-12506558 | Msa0838160:intron | 45.0% |
| ATGGCAAACGTAGTTTCACC+AGG | + | chr5_4:12506584-12506603 | Msa0838160:CDS | 45.0% | |
| TGGCAAACGTAGTTTCACCA+GGG | + | chr5_4:12506585-12506604 | Msa0838160:CDS | 45.0% | |
| AGCCTCTGAATTCTTAGGGA+CGG | - | chr5_4:12506611-12506630 | None:intergenic | 45.0% | |
| TCCCTAAGAATTCAGAGGCT+CGG | + | chr5_4:12506611-12506630 | Msa0838160:CDS | 45.0% | |
| !!! | TTGCTTTTGGTGTTAGGTGG+GGG | - | chr5_4:12506789-12506808 | None:intergenic | 45.0% |
| !!! | CTTGCTTTTGGTGTTAGGTG+GGG | - | chr5_4:12506790-12506809 | None:intergenic | 45.0% |
| !!! | CTCTTGCTTTTGGTGTTAGG+TGG | - | chr5_4:12506792-12506811 | None:intergenic | 45.0% |
| CACCTAACACCAAAAGCAAG+AGG | + | chr5_4:12506790-12506809 | Msa0838160:intron | 45.0% | |
| !!! | GTCCTCTTGCTTTTGGTGTT+AGG | - | chr5_4:12506795-12506814 | None:intergenic | 45.0% |
| !!! | TTTTTTGAGGTCCATGGCTG+AGG | + | chr5_4:12506917-12506936 | Msa0838160:intron | 45.0% |
| !!! | TTTTTGAGGTCCATGGCTGA+GGG | + | chr5_4:12506918-12506937 | Msa0838160:intron | 45.0% |
| CTTGTCGACCGCAACAAAAA+TGG | + | chr5_4:12507057-12507076 | Msa0838160:intron | 45.0% | |
| TCGACCGCAACAAAAATGGT+TGG | + | chr5_4:12507061-12507080 | Msa0838160:intron | 45.0% | |
| AGCTCTCTCTCCATCTTATG+TGG | - | chr5_4:12507229-12507248 | None:intergenic | 45.0% | |
| ACATAAGATGGAGAGAGAGC+TGG | + | chr5_4:12507228-12507247 | Msa0838160:CDS | 45.0% | |
| !! | GATCTTGCAACGAAGGTACT+AGG | + | chr5_4:12507256-12507275 | Msa0838160:intron | 45.0% |
| AGGTACTAGGCACAAAGCAA+TGG | + | chr5_4:12507269-12507288 | Msa0838160:intron | 45.0% | |
| ! | CGAACCATGAGAAGTTCTAG+CGG | - | chr5_4:12507569-12507588 | None:intergenic | 45.0% |
| CGCTAGAACTTCTCATGGTT+CGG | + | chr5_4:12507567-12507586 | Msa0838160:intron | 45.0% | |
| !! | TCTCATGGTTCGGTACAGAA+AGG | + | chr5_4:12507577-12507596 | Msa0838160:intron | 45.0% |
| GCAAAAAATCAGGCATGCCA+AGG | + | chr5_4:12508023-12508042 | Msa0838160:intron | 45.0% | |
| ! | TCTGCATTCCAAACTAGCCT+TGG | - | chr5_4:12508043-12508062 | None:intergenic | 45.0% |
| GCTGGTGTTTACGTATTGGA+TGG | + | chr5_4:12508347-12508366 | Msa0838160:intron | 45.0% | |
| TGTCTTTAGCCCTCACTTAC+TGG | - | chr5_4:12508590-12508609 | None:intergenic | 45.0% | |
| GTGAGGGCTAAAGACAAACA+AGG | + | chr5_4:12508594-12508613 | Msa0838160:intron | 45.0% | |
| CTTTCGGAGTATAGCGCAAA+TGG | - | chr5_4:12508756-12508775 | None:intergenic | 45.0% | |
| ! | ATATGCACCAAACGGGCTTT+CGG | - | chr5_4:12508772-12508791 | None:intergenic | 45.0% |
| GATCAGGAATTGACGTCGAT+TGG | + | chr5_4:12509270-12509289 | Msa0838160:intron | 45.0% | |
| ! | ACATGTCAGATTGGTTGTCG+TGG | + | chr5_4:12509324-12509343 | Msa0838160:intron | 45.0% |
| ! | CATGTCAGATTGGTTGTCGT+GGG | + | chr5_4:12509325-12509344 | Msa0838160:intron | 45.0% |
| TGCTAACCCACCAAATTCCA+AGG | + | chr5_4:12509406-12509425 | Msa0838160:intron | 45.0% | |
| !! | TTGGTTTGGTGAATGCATGG+GGG | - | chr5_4:12509869-12509888 | None:intergenic | 45.0% |
| !!! | TTGCTGGGCCATTTTTTACC+GGG | - | chr5_4:12510396-12510415 | None:intergenic | 45.0% |
| !!! | GTTGCTGGGCCATTTTTTAC+CGG | - | chr5_4:12510397-12510416 | None:intergenic | 45.0% |
| GAAAGCGAGTGAGGGAATTT+AGG | - | chr5_4:12510429-12510448 | None:intergenic | 45.0% | |
| ACAAGAGTGAAAGCGAGTGA+GGG | - | chr5_4:12510437-12510456 | None:intergenic | 45.0% | |
| AACAAGAGTGAAAGCGAGTG+AGG | - | chr5_4:12510438-12510457 | None:intergenic | 45.0% | |
| TTTGAGAGAGAAGCAGGGTT+GGG | - | chr5_4:12510539-12510558 | None:intergenic | 45.0% | |
| ATTTGAGAGAGAAGCAGGGT+TGG | - | chr5_4:12510540-12510559 | None:intergenic | 45.0% | |
| CGAGATTTGAGAGAGAAGCA+GGG | - | chr5_4:12510544-12510563 | None:intergenic | 45.0% | |
| TCGAGATTTGAGAGAGAAGC+AGG | - | chr5_4:12510545-12510564 | None:intergenic | 45.0% | |
| !!! | CTGGTGGGTTTTTGTAGATG+AGG | - | chr5_4:12510631-12510650 | None:intergenic | 45.0% |
| AAGTACAAGGTTGCCGGAAA+CGG | - | chr5_4:12510656-12510675 | None:intergenic | 45.0% | |
| CGAGATAAGTACAAGGTTGC+CGG | - | chr5_4:12510662-12510681 | None:intergenic | 45.0% | |
| GCAACCTTGTACTTATCTCG+AGG | + | chr5_4:12510662-12510681 | Msa0838160:CDS | 45.0% | |
| GAAAACAAACACCAGAGCTG+TGG | + | chr5_4:12510684-12510703 | Msa0838160:CDS | 45.0% | |
| TTCATTCCAAGCACCTTCAC+CGG | + | chr5_4:12510750-12510769 | Msa0838160:CDS | 45.0% | |
| TATAAGCCGGAGAAGATGAC+CGG | - | chr5_4:12510790-12510809 | None:intergenic | 45.0% | |
| ! | TCATTTGCTACGGGCTTTCT+TGG | + | chr5_4:12510882-12510901 | Msa0838160:intron | 45.0% |
| CAAGTTTGCAAAGTGCACGT+TGG | - | chr5_4:12511290-12511309 | None:intergenic | 45.0% | |
| CATGATCGTCACTAACATCG+TGG | - | chr5_4:12511334-12511353 | None:intergenic | 45.0% | |
| CACAATTTGCACATCGTCAC+TGG | - | chr5_4:12511360-12511379 | None:intergenic | 45.0% | |
| ! | GAATGCGTTAGTGTTACTCC+TGG | - | chr5_4:12511436-12511455 | None:intergenic | 45.0% |
| ATGTAACTGATGTGTGACGG+AGG | + | chr5_4:12511580-12511599 | Msa0838160:intron | 45.0% | |
| !!! | AAATTGCCGTTTTGGCTGGA+TGG | - | chr5_4:12511653-12511672 | None:intergenic | 45.0% |
| GAATGGCCTTCTATACCTAC+TGG | + | chr5_4:12512021-12512040 | Msa0838160:intron | 45.0% | |
| GACAGTTTGGGGAGATGTTA+TGG | + | chr5_4:12512058-12512077 | Msa0838160:intron | 45.0% | |
| AGGAACATAGATGGGTCTGA+GGG | - | chr5_4:12512515-12512534 | None:intergenic | 45.0% | |
| GAAGGAAAGTAGCAGCAAAG+AGG | - | chr5_4:12512549-12512568 | None:intergenic | 45.0% | |
| AAGCAAGTCTTGCAACAAGG+TGG | + | chr5_4:12512847-12512866 | Msa0838160:CDS | 45.0% | |
| TGCAACAAGGTGGAAGATGT+TGG | + | chr5_4:12512857-12512876 | Msa0838160:CDS | 45.0% | |
| GCAACAAGGTGGAAGATGTT+GGG | + | chr5_4:12512858-12512877 | Msa0838160:CDS | 45.0% | |
| GTATGCTCTTCCCCTATCAT+TGG | - | chr5_4:12512896-12512915 | None:intergenic | 45.0% | |
| !! | AAAAATAAATAAAAGATAAA+AGG | - | chr5_4:12510014-12510033 | None:intergenic | 5.0% |
| GGCGGTGAGATTGATCCATT+CGG | - | chr5_4:12503953-12503972 | None:intergenic | 50.0% | |
| TGGGTGGAAACAGCACAACA+TGG | + | chr5_4:12504487-12504506 | Msa0838160:CDS | 50.0% | |
| GAATGCCGGAAATTGGACCA+CGG | - | chr5_4:12504560-12504579 | None:intergenic | 50.0% | |
| TCTGTGGAAGTTGAAGCTGG+TGG | - | chr5_4:12504729-12504748 | None:intergenic | 50.0% | |
| TGTAAAGGATCGCGACCACT+AGG | + | chr5_4:12505462-12505481 | Msa0838160:intron | 50.0% | |
| GCGACCACTAGGACTGTTTA+TGG | + | chr5_4:12505473-12505492 | Msa0838160:intron | 50.0% | |
| CCGGAAGAACCAAACTGTGA+TGG | + | chr5_4:12505743-12505762 | Msa0838160:intron | 50.0% | |
| GCAGAAAATCAGGCATGCCA+AGG | + | chr5_4:12505992-12506011 | Msa0838160:intron | 50.0% | |
| ! | CAGGCATGCCAAGGTTAGTT+TGG | + | chr5_4:12506001-12506020 | Msa0838160:CDS | 50.0% |
| TTCGCTTGTGTATTGGGGTG+TGG | + | chr5_4:12506351-12506370 | Msa0838160:CDS | 50.0% | |
| GCTCACGCTTGAGTTTGCAA+TGG | + | chr5_4:12506565-12506584 | Msa0838160:intron | 50.0% | |
| GCCGAGCCTCTGAATTCTTA+GGG | - | chr5_4:12506615-12506634 | None:intergenic | 50.0% | |
| AGCCGAGCCTCTGAATTCTT+AGG | - | chr5_4:12506616-12506635 | None:intergenic | 50.0% | |
| !! | TCGGCTCTGGGAATGAAAAG+AGG | + | chr5_4:12506630-12506649 | Msa0838160:CDS | 50.0% |
| ACAAGGGGACAGAAAAAGGC+TGG | + | chr5_4:12506843-12506862 | Msa0838160:intron | 50.0% | |
| CAAGGGGACAGAAAAAGGCT+GGG | + | chr5_4:12506844-12506863 | Msa0838160:intron | 50.0% | |
| AAGGGGACAGAAAAAGGCTG+GGG | + | chr5_4:12506845-12506864 | Msa0838160:intron | 50.0% | |
| TTGGAGGGCAGTAGTACTAG+TGG | + | chr5_4:12506881-12506900 | Msa0838160:intron | 50.0% | |
| TGGAGGGCAGTAGTACTAGT+GGG | + | chr5_4:12506882-12506901 | Msa0838160:intron | 50.0% | |
| ACTAAAACTACGCGCGGATG+CGG | + | chr5_4:12507092-12507111 | Msa0838160:intron | 50.0% | |
| TGCGGCAAAGTAGTCATCCT+AGG | + | chr5_4:12507110-12507129 | Msa0838160:intron | 50.0% | |
| GCAAAGTAGTCATCCTAGGC+AGG | + | chr5_4:12507114-12507133 | Msa0838160:intron | 50.0% | |
| GGAGTGTGATCTTGCAACGA+AGG | + | chr5_4:12507249-12507268 | Msa0838160:CDS | 50.0% | |
| CGGAGTATAGCGCAAATGGT+TGG | - | chr5_4:12508752-12508771 | None:intergenic | 50.0% | |
| CTATACTCCGAAAGCCCGTT+TGG | + | chr5_4:12508762-12508781 | Msa0838160:intron | 50.0% | |
| !! | GCCCGTTTGGTGCATATGAT+AGG | + | chr5_4:12508775-12508794 | Msa0838160:intron | 50.0% |
| GGTTGTCGTGGGAGTAGAAA+TGG | + | chr5_4:12509336-12509355 | Msa0838160:intron | 50.0% | |
| !! | GGTATTGGTGCACCAAACAG+TGG | + | chr5_4:12509452-12509471 | Msa0838160:intron | 50.0% |
| TGGTGCACCAAACAGTGGAT+TGG | + | chr5_4:12509457-12509476 | Msa0838160:intron | 50.0% | |
| ACAACTAGGGAAGGAGGAGA+AGG | - | chr5_4:12509789-12509808 | None:intergenic | 50.0% | |
| TTGGTGAATGCATGGGGGAA+AGG | - | chr5_4:12509864-12509883 | None:intergenic | 50.0% | |
| CAAGGGCTGATGAGAGAATG+CGG | - | chr5_4:12510585-12510604 | None:intergenic | 50.0% | |
| ! | TATTCTTTGGGAGCTCCCTC+TGG | + | chr5_4:12510712-12510731 | Msa0838160:CDS | 50.0% |
| AGAACAAGCAGTTCGCCAGA+GGG | - | chr5_4:12510730-12510749 | None:intergenic | 50.0% | |
| AAGAACAAGCAGTTCGCCAG+AGG | - | chr5_4:12510731-12510750 | None:intergenic | 50.0% | |
| GAGTTTCCGGTCATCTTCTC+CGG | + | chr5_4:12510781-12510800 | Msa0838160:intron | 50.0% | |
| TTGCAAAGTGCACGTTGGCA+TGG | - | chr5_4:12511285-12511304 | None:intergenic | 50.0% | |
| GTGTGAATCGTGTGTGTGTG+TGG | + | chr5_4:12511379-12511398 | Msa0838160:intron | 50.0% | |
| GAATCGTGTGTGTGTGTGGA+CGG | + | chr5_4:12511383-12511402 | Msa0838160:intron | 50.0% | |
| ! | GTGTGTGGACGGATGTTTTC+TGG | + | chr5_4:12511394-12511413 | Msa0838160:intron | 50.0% |
| ! | TGTGGACGGATGTTTTCTGG+AGG | + | chr5_4:12511397-12511416 | Msa0838160:intron | 50.0% |
| TGTGGTCCATCCAGCCAAAA+CGG | + | chr5_4:12511644-12511663 | Msa0838160:intron | 50.0% | |
| CAGGAACATAGATGGGTCTG+AGG | - | chr5_4:12512516-12512535 | None:intergenic | 50.0% | |
| AGCCCCTCTTCCTTATTGGC+TGG | + | chr5_4:12503760-12503779 | Msa0838160:CDS | 55.0% | |
| TCAATCTCACCGCCCACTTG+CGG | + | chr5_4:12503959-12503978 | Msa0838160:intron | 55.0% | |
| TAAATGAGGCCCCCGCAAGT+GGG | - | chr5_4:12503974-12503993 | None:intergenic | 55.0% | |
| TTAAATGAGGCCCCCGCAAG+TGG | - | chr5_4:12503975-12503994 | None:intergenic | 55.0% | |
| GGACAAATGGGACAGGCACT+TGG | + | chr5_4:12505167-12505186 | Msa0838160:CDS | 55.0% | |
| ! | GCATTGGCAATGGCCTTACC+AGG | + | chr5_4:12506063-12506082 | Msa0838160:CDS | 55.0% |
| GAAGCCACTAGTGTACCAGG+AGG | + | chr5_4:12506273-12506292 | Msa0838160:CDS | 55.0% | |
| TGAATTCTTAGGGACGGCCC+TGG | - | chr5_4:12506605-12506624 | None:intergenic | 55.0% | |
| GGCCGTCCCTAAGAATTCAG+AGG | + | chr5_4:12506606-12506625 | Msa0838160:CDS | 55.0% | |
| AGAATTCAGAGGCTCGGCTC+TGG | + | chr5_4:12506617-12506636 | Msa0838160:CDS | 55.0% | |
| GAATTCAGAGGCTCGGCTCT+GGG | + | chr5_4:12506618-12506637 | Msa0838160:CDS | 55.0% | |
| AGGGGACAGAAAAAGGCTGG+GGG | + | chr5_4:12506846-12506865 | Msa0838160:intron | 55.0% | |
| TGAACTGTTTGCACCCCCTC+AGG | + | chr5_4:12506955-12506974 | Msa0838160:intron | 55.0% | |
| GAACTGTTTGCACCCCCTCA+GGG | + | chr5_4:12506956-12506975 | Msa0838160:intron | 55.0% | |
| TGAAGTGATGGTTGGGGTGC+AGG | + | chr5_4:12507146-12507165 | Msa0838160:intron | 55.0% | |
| TCCTGACACGACCCTCCAAT+AGG | - | chr5_4:12507172-12507191 | None:intergenic | 55.0% | |
| ! | CAGGCATGCCAAGGCTAGTT+TGG | + | chr5_4:12508032-12508051 | Msa0838160:intron | 55.0% |
| ! | GTGCACTAAACGGACTCCGA+TGG | + | chr5_4:12509522-12509541 | Msa0838160:intron | 55.0% |
| ! | ATGAGAGAATGCGGTGGTGG+TGG | - | chr5_4:12510576-12510595 | None:intergenic | 55.0% |
| CTGATGAGAGAATGCGGTGG+TGG | - | chr5_4:12510579-12510598 | None:intergenic | 55.0% | |
| TTGCTACGGGCTTTCTTGGC+TGG | + | chr5_4:12510886-12510905 | Msa0838160:intron | 55.0% | |
| CAATCTCACCGCCCACTTGC+GGG | + | chr5_4:12503960-12503979 | Msa0838160:intron | 60.0% | |
| AATCTCACCGCCCACTTGCG+GGG | + | chr5_4:12503961-12503980 | Msa0838160:intron | 60.0% | |
| GCCACTAGTGTACCAGGAGG+CGG | + | chr5_4:12506276-12506295 | Msa0838160:CDS | 60.0% | |
| TCCGCCTCCTGGTACACTAG+TGG | - | chr5_4:12506280-12506299 | None:intergenic | 60.0% | |
| GTGCAAGTGTTTCCGCCTCC+TGG | - | chr5_4:12506291-12506310 | None:intergenic | 60.0% | |
| GGAGGCGGAAACACTTGCAC+TGG | + | chr5_4:12506291-12506310 | Msa0838160:CDS | 60.0% | |
| TTGAGGTCCATGGCTGAGGG+AGG | + | chr5_4:12506921-12506940 | Msa0838160:intron | 60.0% | |
| TGGTTGGGGTGCAGGCCTAT+TGG | + | chr5_4:12507154-12507173 | Msa0838160:intron | 60.0% | |
| TTGGGGTGCAGGCCTATTGG+AGG | + | chr5_4:12507157-12507176 | Msa0838160:intron | 60.0% | |
| TGGGGTGCAGGCCTATTGGA+GGG | + | chr5_4:12507158-12507177 | Msa0838160:intron | 60.0% | |
| GCCTATTGGAGGGTCGTGTC+AGG | + | chr5_4:12507168-12507187 | Msa0838160:intron | 60.0% | |
| GCGGCCGCTAGAACTTCTCA+TGG | + | chr5_4:12507562-12507581 | Msa0838160:intron | 60.0% | |
| GGGCTGATGAGAGAATGCGG+TGG | - | chr5_4:12510582-12510601 | None:intergenic | 60.0% | |
| AAACCCACCAGCGCCGTTTC+CGG | + | chr5_4:12510640-12510659 | Msa0838160:intron | 60.0% | |
| CCAAGCACCTTCACCGGAGA+CGG | + | chr5_4:12510756-12510775 | Msa0838160:CDS | 60.0% | |
| CAAGCACCTTCACCGGAGAC+GGG | + | chr5_4:12510757-12510776 | Msa0838160:CDS | 60.0% | |
| AACTCACCCGTCTCCGGTGA+AGG | - | chr5_4:12510766-12510785 | None:intergenic | 60.0% | |
| ACCGGAGACGGGTGAGTTTC+CGG | + | chr5_4:12510768-12510787 | Msa0838160:intron | 60.0% | |
| ACCGGAAACTCACCCGTCTC+CGG | - | chr5_4:12510772-12510791 | None:intergenic | 60.0% | |
| TACGGGCTTTCTTGGCTGGC+TGG | + | chr5_4:12510890-12510909 | Msa0838160:intron | 60.0% | |
| ! | ACGGGCTTTCTTGGCTGGCT+GGG | + | chr5_4:12510891-12510910 | Msa0838160:intron | 60.0% |
| ATCTCACCGCCCACTTGCGG+GGG | + | chr5_4:12503962-12503981 | Msa0838160:intron | 65.0% | |
| CTGTTTGCACCCCCTCAGGG+CGG | + | chr5_4:12506959-12506978 | Msa0838160:intron | 65.0% | |
| TGTTTGCACCCCCTCAGGGC+GGG | + | chr5_4:12506960-12506979 | Msa0838160:intron | 65.0% | |
| AAACTCAGGCCCCGCCCTGA+GGG | - | chr5_4:12506973-12506992 | None:intergenic | 65.0% | |
| !! | TTGCCGGAAACGGCGCTGGT+GGG | - | chr5_4:12510646-12510665 | None:intergenic | 65.0% |
| AAGGTTGCCGGAAACGGCGC+TGG | - | chr5_4:12510650-12510669 | None:intergenic | 65.0% | |
| !! | CCGTCTCCGGTGAAGGTGCT+TGG | - | chr5_4:12510759-12510778 | None:intergenic | 65.0% |
| !! | GGAGGAGCACTTGTGCTGCC+AGG | + | chr5_4:12511415-12511434 | Msa0838160:intron | 65.0% |
| ATGAGGCCCCCGCAAGTGGG+CGG | - | chr5_4:12503971-12503990 | None:intergenic | 70.0% | |
| AGCTGGGCCTCCCTCAGCCA+TGG | - | chr5_4:12506931-12506950 | None:intergenic | 70.0% | |
| GTTTGCACCCCCTCAGGGCG+GGG | + | chr5_4:12506961-12506980 | Msa0838160:intron | 70.0% | |
| AACTCAGGCCCCGCCCTGAG+GGG | - | chr5_4:12506972-12506991 | None:intergenic | 70.0% | |
| GAAACTCAGGCCCCGCCCTG+AGG | - | chr5_4:12506974-12506993 | None:intergenic | 70.0% | |
| ! | GTTGCCGGAAACGGCGCTGG+TGG | - | chr5_4:12510647-12510666 | None:intergenic | 70.0% |
| ACTCAGGCCCCGCCCTGAGG+GGG | - | chr5_4:12506971-12506990 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 12503452 | 12512924 | 12503452 | ID=Msa0838160;Name=Msa0838160 |
| chr5_4 | mRNA | 12503452 | 12512924 | 12503452 | ID=Msa0838160-mRNA-1;Parent=Msa0838160;Name=Msa0838160-mRNA-1;_AED=0.28;_eAED=0.29;_QI=0|0|0|0.71|1|1|7|0|744 |
| chr5_4 | exon | 12503452 | 12503781 | 12503452 | ID=Msa0838160-mRNA-1:exon:5506;Parent=Msa0838160-mRNA-1 |
| chr5_4 | exon | 12504468 | 12505282 | 12504468 | ID=Msa0838160-mRNA-1:exon:5507;Parent=Msa0838160-mRNA-1 |
| chr5_4 | exon | 12505996 | 12506407 | 12505996 | ID=Msa0838160-mRNA-1:exon:5508;Parent=Msa0838160-mRNA-1 |
| chr5_4 | exon | 12506566 | 12506651 | 12506566 | ID=Msa0838160-mRNA-1:exon:5509;Parent=Msa0838160-mRNA-1 |
| chr5_4 | exon | 12507213 | 12507270 | 12507213 | ID=Msa0838160-mRNA-1:exon:5510;Parent=Msa0838160-mRNA-1 |
| chr5_4 | exon | 12510651 | 12510778 | 12510651 | ID=Msa0838160-mRNA-1:exon:5511;Parent=Msa0838160-mRNA-1 |
| chr5_4 | exon | 12512519 | 12512924 | 12512519 | ID=Msa0838160-mRNA-1:exon:5512;Parent=Msa0838160-mRNA-1 |
| chr5_4 | CDS | 12503452 | 12503781 | 12503452 | ID=Msa0838160-mRNA-1:cds;Parent=Msa0838160-mRNA-1 |
| chr5_4 | CDS | 12504468 | 12505282 | 12504468 | ID=Msa0838160-mRNA-1:cds;Parent=Msa0838160-mRNA-1 |
| chr5_4 | CDS | 12505996 | 12506407 | 12505996 | ID=Msa0838160-mRNA-1:cds;Parent=Msa0838160-mRNA-1 |
| chr5_4 | CDS | 12506566 | 12506651 | 12506566 | ID=Msa0838160-mRNA-1:cds;Parent=Msa0838160-mRNA-1 |
| chr5_4 | CDS | 12507213 | 12507270 | 12507213 | ID=Msa0838160-mRNA-1:cds;Parent=Msa0838160-mRNA-1 |
| chr5_4 | CDS | 12510651 | 12510778 | 12510651 | ID=Msa0838160-mRNA-1:cds;Parent=Msa0838160-mRNA-1 |
| chr5_4 | CDS | 12512519 | 12512924 | 12512519 | ID=Msa0838160-mRNA-1:cds;Parent=Msa0838160-mRNA-1 |
| Gene Sequence |
| Protein sequence |
