AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0838470

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0838470 MtrunA17_Chr5g0406041 96.670 901 4 1 1 875 1 901 0.0 1793
Msa0838470 MtrunA17_Chr4g0024571 82.497 897 130 2 1 871 82 977 0.0 1556
Msa0838470 MtrunA17_Chr2g0322641 82.031 896 134 2 2 871 83 977 0.0 1546
Msa0838470 MtrunA17_Chr1g0187311 69.697 594 161 1 278 871 1 575 0.0 880
Msa0838470 MtrunA17_Chr1g0187301 72.982 285 51 1 1 259 4 288 3.72e-141 420
Msa0838470 MtrunA17_Chr2g0310051 78.723 235 44 1 311 545 1 229 1.79e-126 381
Msa0838470 MtrunA17_Chr2g0310071 80.303 198 13 1 90 261 1 198 3.29e-101 314
Msa0838470 MtrunA17_Chr2g0310041 76.316 152 31 1 721 872 33 179 2.45e-77 249
Msa0838470 MtrunA17_Chr4g0037511 75.926 54 13 0 677 730 2 55 3.69e-21 87.8
Msa0838470 MtrunA17_Chr4g0064441 65.957 47 16 0 587 633 1 47 1.19e-15 72.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0838470 AT4G35830.1 85.061 897 107 2 1 871 1 896 0.0 1593
Msa0838470 AT2G05710.1 84.040 896 116 2 1 870 93 987 0.0 1576
Msa0838470 AT4G26970.1 76.228 896 186 2 1 870 98 992 0.0 1442
Msa0838470 AT4G35830.2 85.120 793 92 1 105 871 1 793 0.0 1412
Msa0838470 AT5G54950.1 69.355 62 19 0 796 857 1 62 6.83e-24 96.3

Find 288 sgRNAs with CRISPR-Local

Find 581 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAACAATAAAGTTGGGTTTA+AGG 0.133655 5_4:+12854917 Msa0838470:CDS
ATGATCTCCTTGAAGAAATA+AGG 0.220371 5_4:+12859553 Msa0838470:three_prime_UTR
GGGGCACGATACAATTATTT+TGG 0.225658 5_4:+12858492 Msa0838470:CDS
CCAGGTGGTGGAGGTGAATT+TGG 0.239034 5_4:+12852212 Msa0838470:CDS
GCATCTGCAATTACTGAAAA+TGG 0.246895 5_4:+12857139 Msa0838470:CDS
ATTGATGGCTTGGGTGTTGC+TGG 0.251506 5_4:+12853329 Msa0838470:CDS
CATCTTATTAGCTCGTAAAT+AGG 0.268189 5_4:-12854188 None:intergenic
GAGGATTCACCGTAGTAATT+TGG 0.270564 5_4:+12858695 Msa0838470:CDS
TTCTTCACTCCATGGGAGCC+TGG 0.272887 5_4:-12857795 None:intergenic
AATGGAATCTCCACCTGTTT+AGG 0.275670 5_4:-12852503 None:intergenic
AAAACTATACATGTTCCTTC+TGG 0.279032 5_4:+12858047 Msa0838470:CDS
TTACTCAATAAGGATACTTT+TGG 0.292180 5_4:+12852400 Msa0838470:CDS
TGTCATTGATCACTCTGTTC+AGG 0.293303 5_4:+12852886 Msa0838470:CDS
AAATGCTGTTCAGGCAAATA+TGG 0.295969 5_4:+12852928 Msa0838470:CDS
AACTTTGTCTGAGATTCTTT+TGG 0.297074 5_4:-12856358 None:intergenic
GTGTGCTGCCCGATATGTTT+AGG 0.298300 5_4:+12857634 Msa0838470:CDS
GTTGCTGGGTGGGGAGTTGG+TGG 0.300734 5_4:+12853344 Msa0838470:CDS
CAAATCTTTCCTTGTTCCTC+TGG 0.301805 5_4:-12852961 None:intergenic
CAGAGGAACAAGGAAAGATT+TGG 0.304510 5_4:+12852962 Msa0838470:CDS
ATGCTCATGCCTTTAAAATA+AGG 0.305646 5_4:-12857765 None:intergenic
GAGAGTGTACTCATCCTATT+TGG 0.308173 5_4:+12854335 Msa0838470:CDS
TTTGTTCACAATACGAATAT+TGG 0.308508 5_4:-12858000 None:intergenic
CAGCTAGGGTTTAATATAGT+TGG 0.309013 5_4:+12857064 Msa0838470:CDS
ATTCCTTTGTGTTTCAAGTC+TGG 0.310093 5_4:+12858732 Msa0838470:CDS
ACATATTATTTACAACTTCC+TGG 0.310625 5_4:-12859529 None:intergenic
TTTACATTCTAGTGAATATC+AGG 0.313518 5_4:+12859317 Msa0838470:three_prime_UTR
AGCATGTGATTTGGGATTGC+AGG 0.315702 5_4:+12856510 Msa0838470:CDS
ACAAGTCTTGCTCCAGGTTC+TGG 0.321504 5_4:+12856895 Msa0838470:CDS
GGTGTTGCTGGGTGGGGAGT+TGG 0.325408 5_4:+12853341 Msa0838470:CDS
AGGTAGTTAGCCCTCGTTAA+TGG 0.326277 5_4:-12857291 None:intergenic
GCCGGCTAGGGTGCTTCTTC+AGG 0.328032 5_4:+12852529 Msa0838470:CDS
CAAAACCCCTTATTTCTTCA+AGG 0.330526 5_4:-12859560 None:intergenic
CAGCTGTATTGTCTGGAAAT+AGG 0.332651 5_4:+12857247 Msa0838470:CDS
AAAGATTTGGTTTCCTCAAA+TGG 0.333134 5_4:+12852975 Msa0838470:CDS
GCAAAGAAAGCATGTGATTT+GGG 0.336190 5_4:+12856502 Msa0838470:CDS
TAGGTCCAACTTCTCCATTT+AGG 0.347518 5_4:-12858025 None:intergenic
GGCTTGGGTGTTGCTGGGTG+GGG 0.348488 5_4:+12853335 Msa0838470:CDS
TGGCTTGGGTGTTGCTGGGT+GGG 0.352060 5_4:+12853334 Msa0838470:CDS
GTTGTTGCCTATGCCCTTGC+CGG 0.354689 5_4:+12857330 Msa0838470:CDS
CTTGTTGTTCCTCCTGGATC+AGG 0.355369 5_4:+12853022 Msa0838470:CDS
TGAGTGTATTAATCAGATTA+AGG 0.358443 5_4:-12859472 None:intergenic
ATATGTTTCCCTAAACATAT+CGG 0.363669 5_4:-12857643 None:intergenic
GCAAACATGTCTCCTGAGTA+TGG 0.374893 5_4:+12854005 Msa0838470:CDS
ATGCACTTCCTTACTCAATA+AGG 0.375893 5_4:+12852390 Msa0838470:CDS
GAAGAATACTTCTCCTAAAC+AGG 0.377938 5_4:+12852490 Msa0838470:CDS
TTCCTTTGTGTTTCAAGTCT+GGG 0.379769 5_4:+12858733 Msa0838470:CDS
TCTTCACTCCATGGGAGCCT+GGG 0.379934 5_4:-12857794 None:intergenic
AAAAGTATCCTTATTGAGTA+AGG 0.383661 5_4:-12852398 None:intergenic
GCTTACTGTTTGCTCAACTT+TGG 0.384031 5_4:+12857819 Msa0838470:CDS
TCACACACAACTATGATTGA+TGG 0.385745 5_4:+12853314 Msa0838470:CDS
ATTGTGAACAAATTCCTAAA+TGG 0.386552 5_4:+12858011 Msa0838470:CDS
CATCTGGCAATCTTTATGCC+TGG 0.388567 5_4:+12857712 Msa0838470:CDS
CTCTATCCTGACAGCGTTGT+CGG 0.388828 5_4:+12853284 Msa0838470:CDS
ATTTGAGGTATTTGTACAAC+TGG 0.392791 5_4:-12856449 None:intergenic
CCCACGTTCTGTAAGGTATC+TGG 0.394521 5_4:-12857904 None:intergenic
CCGTAGTAATTTGGTGGGAA+TGG 0.395867 5_4:+12858704 Msa0838470:CDS
TGCAAAGAAAGCATGTGATT+TGG 0.398273 5_4:+12856501 Msa0838470:CDS
ATACCTCTGTATCAAATCTC+AGG 0.400941 5_4:-12858887 None:intergenic
CACAACTATGATTGATGGCT+TGG 0.400977 5_4:+12853319 Msa0838470:CDS
TACATCTGCTATTTCTTCAC+TGG 0.403993 5_4:-12857506 None:intergenic
ACTACGTGCATTGGAAATTC+AGG 0.404162 5_4:+12857097 Msa0838470:CDS
ATCTGGCAATCTTTATGCCT+GGG 0.404692 5_4:+12857713 Msa0838470:CDS
CTAAGAAAGCATGGGGTTGT+TGG 0.405674 5_4:+12853811 Msa0838470:CDS
AACATGCTTGTTGTTCCTCC+TGG 0.410773 5_4:+12853016 Msa0838470:CDS
GTCGTCAATATGTTGTTGAA+TGG 0.411284 5_4:-12852179 None:intergenic
CGAATTTCATTCACACTGCT+TGG 0.411985 5_4:-12858810 None:intergenic
GGAGTGGAAGTTCTCGTGAT+TGG 0.412339 5_4:+12858530 Msa0838470:CDS
AAGATTTGGTTTCCTCAAAT+GGG 0.413501 5_4:+12852976 Msa0838470:CDS
GTATGCGAGACGCGATGAAC+AGG 0.420562 5_4:+12852713 Msa0838470:CDS
TTCAAGATTGAGCTCCAAAT+AGG 0.421242 5_4:-12854349 None:intergenic
TCGGTTCCGACAACGCTGTC+AGG 0.424031 5_4:-12853290 None:intergenic
AAACTATACATGTTCCTTCT+GGG 0.426329 5_4:+12858048 Msa0838470:CDS
AGCTAGGGTTTAATATAGTT+GGG 0.429612 5_4:+12857065 Msa0838470:CDS
TGTGCTGCCCGATATGTTTA+GGG 0.431450 5_4:+12857635 Msa0838470:CDS
GAACTTGCTTACTTCAATCA+TGG 0.432022 5_4:+12859026 Msa0838470:CDS
TGATCTCCTTGAAGAAATAA+GGG 0.433638 5_4:+12859554 Msa0838470:three_prime_UTR
CCCAACTTTATTGTTGAGGC+AGG 0.433970 5_4:-12854910 None:intergenic
GCCTGCCTCAACAATAAAGT+TGG 0.434707 5_4:+12854909 Msa0838470:CDS
CGTAGTAATTTGGTGGGAAT+GGG 0.436188 5_4:+12858705 Msa0838470:CDS
ATTCCACATAGGGTTGCCTT+TGG 0.437022 5_4:-12857676 None:intergenic
AGGCATGAGTGAACTACCTT+TGG 0.438062 5_4:+12853965 Msa0838470:CDS
GTAGCTGCAGCTGTATTGTC+TGG 0.442226 5_4:+12857240 Msa0838470:CDS
ACGAGCTAATAAGATGTTTG+TGG 0.443131 5_4:+12854195 Msa0838470:CDS
CATATTATTTACAACTTCCT+GGG 0.444172 5_4:-12859528 None:intergenic
TGTAATGCTTGGAGCTGCCT+TGG 0.447259 5_4:+12856477 Msa0838470:CDS
CCATCCTTCGCAATCCCAAT+GGG 0.453140 5_4:-12857451 None:intergenic
AACCCTAGCTGATTCAAATA+CGG 0.453334 5_4:-12857052 None:intergenic
GGGGAAGATGCCGATACTCT+TGG 0.453839 5_4:+12858753 Msa0838470:CDS
TTGTCTAAATAATGTGGAAT+GGG 0.455124 5_4:+12859107 Msa0838470:three_prime_UTR
GTCTGGAAATAGGAACTTTG+AGG 0.458379 5_4:+12857257 Msa0838470:CDS
CTCCCACATTGAAAGGACCT+TGG 0.458551 5_4:-12859134 None:intergenic
AGCACCCTAGCCGGCTTGAA+TGG 0.460936 5_4:-12852521 None:intergenic
TTCTCGTGATTGGGCTGCAA+AGG 0.461921 5_4:+12858540 Msa0838470:CDS
ACTTTGACACCGAGCCCATT+GGG 0.462079 5_4:+12857437 Msa0838470:CDS
AAGCATTACACTAGGATTTG+AGG 0.462114 5_4:-12856464 None:intergenic
TGAAAGAAATGAAAGCAGAT+TGG 0.464865 5_4:+12854883 Msa0838470:CDS
AAGATCAGAAAATGCTGTTC+AGG 0.465390 5_4:+12852919 Msa0838470:CDS
TATCGACCCCACGTTCTGTA+AGG 0.465586 5_4:-12857911 None:intergenic
AATAGTTTATCTGTTCCATC+TGG 0.468632 5_4:+12857696 Msa0838470:CDS
CATGTGTCTCAGGTCCAAAA+AGG 0.469045 5_4:+12854382 Msa0838470:CDS
TTGATGGCTTGGGTGTTGCT+GGG 0.470451 5_4:+12853330 Msa0838470:CDS
GGGTTTAATATAGTTGGGTA+TGG 0.470647 5_4:+12857070 Msa0838470:CDS
ACGCATTTGAACCCCATTTG+AGG 0.471908 5_4:-12852988 None:intergenic
CCAAATTCACCTCCACCACC+TGG 0.475701 5_4:-12852212 None:intergenic
GGAACTCAGGTGGAGGGTCG+TGG 0.476162 5_4:+12859196 Msa0838470:three_prime_UTR
TGTGTCATGTTGCCCATCCC+AGG 0.477460 5_4:+12859511 Msa0838470:three_prime_UTR
TCCAGCTGGCAGCATACATA+AGG 0.477487 5_4:+12857869 Msa0838470:CDS
AGACGAGACTTCAACTCCTA+TGG 0.478558 5_4:+12857933 Msa0838470:CDS
AAATTCCTAAATGGAGAAGT+TGG 0.480723 5_4:+12858020 Msa0838470:CDS
TCTGTTTACGAGAATAAAAG+TGG 0.487519 5_4:+12859267 Msa0838470:three_prime_UTR
TCCATCCTTCGCAATCCCAA+TGG 0.488367 5_4:-12857452 None:intergenic
GTTCATCGCGTCTCGCATAC+AGG 0.488989 5_4:-12852710 None:intergenic
TATGTTTCCCTAAACATATC+GGG 0.489007 5_4:-12857642 None:intergenic
GCCGATACTCTTGGATTGAC+CGG 0.489079 5_4:+12858762 Msa0838470:CDS
AATAGTCGGTAGGTGAGAAA+AGG 0.491374 5_4:-12851907 None:intergenic
TGGATCAGGAATAGTCCATC+AGG 0.491915 5_4:+12853036 Msa0838470:CDS
CCTGCCTCAACAATAAAGTT+GGG 0.492185 5_4:+12854910 Msa0838470:CDS
GAGTGGAAGTTCTCGTGATT+GGG 0.492557 5_4:+12858531 Msa0838470:CDS
ATTGTCTAAATAATGTGGAA+TGG 0.493357 5_4:+12859106 Msa0838470:three_prime_UTR
GAGTGTATTAATCAGATTAA+GGG 0.493658 5_4:-12859471 None:intergenic
GATGTTGAACCATGTGTCTC+AGG 0.495039 5_4:+12854372 Msa0838470:CDS
CCCATTGGGATTGCGAAGGA+TGG 0.496797 5_4:+12857451 Msa0838470:CDS
AACGAAGGTAATAATAAGAG+AGG 0.498637 5_4:-12851940 None:intergenic
TTCGAATAAAATTAACCCAT+TGG 0.499531 5_4:+12852747 Msa0838470:CDS
GCTCTCAACGATTCTAGAAT+CGG 0.500465 5_4:+12852254 Msa0838470:CDS
TGATGGACTATTCCTGATCC+AGG 0.502386 5_4:-12853034 None:intergenic
TCCTTATGTATGCTGCCAGC+TGG 0.503865 5_4:-12857870 None:intergenic
ATGGCTTGGGTGTTGCTGGG+TGG 0.505414 5_4:+12853333 Msa0838470:CDS
TCAAATCCTAGTGTAATGCT+TGG 0.505454 5_4:+12856466 Msa0838470:CDS
TATTTACAACTTCCTGGGAT+GGG 0.505736 5_4:-12859523 None:intergenic
GACTTTGACACCGAGCCCAT+TGG 0.505960 5_4:+12857436 Msa0838470:CDS
AATCATAGTTGTGTGTGAAT+CGG 0.506400 5_4:-12853309 None:intergenic
ATTTAATTTACGTACTGTGC+CGG 0.506788 5_4:-12857349 None:intergenic
CTTCGCAATCCCAATGGGCT+CGG 0.507585 5_4:-12857446 None:intergenic
CACACTGCTTGGAAGATCAA+TGG 0.510118 5_4:-12858799 None:intergenic
CAACCGTATTTGAATCAGCT+AGG 0.510360 5_4:+12857049 Msa0838470:CDS
CACCAGCAAAACTTAAGCAC+GGG 0.511799 5_4:+12856404 Msa0838470:CDS
CTTCACTCCATGGGAGCCTG+GGG 0.512381 5_4:-12857793 None:intergenic
TCTGGAAATAGGAACTTTGA+GGG 0.512718 5_4:+12857258 Msa0838470:CDS
TCAATCTCAATCTCTTACCA+TGG 0.513285 5_4:+12852011 Msa0838470:exon
ATCAATAAACTAAGGAACTC+AGG 0.515027 5_4:+12859183 Msa0838470:three_prime_UTR
TTACTAAGTATTTGCAGAAG+AGG 0.517241 5_4:+12856923 Msa0838470:CDS
GAATTTCCTCCCACATTGAA+AGG 0.517662 5_4:-12859141 None:intergenic
GAGGAGAAGAGAAGAATAGT+CGG 0.521425 5_4:-12851921 None:intergenic
TTATTTACAACTTCCTGGGA+TGG 0.521601 5_4:-12859524 None:intergenic
ATTGCCACGGCGACTTCCAT+AGG 0.522841 5_4:-12857949 None:intergenic
AGGAGACATGTTTGCTATGG+TGG 0.524275 5_4:-12853997 None:intergenic
AGATTCCATTCAAGCCGGCT+AGG 0.525137 5_4:+12852516 Msa0838470:CDS
CAGGTCAATTTAGAATACCT+TGG 0.526810 5_4:+12853233 Msa0838470:intron
CTCAAATGCTAAGAAAGCAT+GGG 0.527105 5_4:+12853803 Msa0838470:CDS
AGCATTGATCAAGTTTCTGA+TGG 0.527691 5_4:-12859066 None:intergenic
TTCAGTAATTGCAGATGCAA+CGG 0.528669 5_4:-12857134 None:intergenic
TTGGAAAAGCCAGGTGGTGG+AGG 0.529651 5_4:+12852203 Msa0838470:CDS
CAAGGAATTACCAGTAGCAT+TGG 0.529804 5_4:-12858565 None:intergenic
GATTCACCGTAGTAATTTGG+TGG 0.530322 5_4:+12858698 Msa0838470:CDS
TTAACATTGTCTAAATAATG+TGG 0.531028 5_4:+12859101 Msa0838470:three_prime_UTR
TTACCAAAGGCAACCCTATG+TGG 0.531734 5_4:+12857673 Msa0838470:CDS
ATCACGGTGGTGACAGACAA+TGG 0.533403 5_4:+12858846 Msa0838470:CDS
TCTCGTGATTGGGCTGCAAA+GGG 0.534225 5_4:+12858541 Msa0838470:CDS
GACGCGATGAACAGGCTTGG+TGG 0.535893 5_4:+12852721 Msa0838470:CDS
TATGGATGCACTACGTGCAT+TGG 0.538023 5_4:+12857088 Msa0838470:CDS
GATTCCATTCAAGCCGGCTA+GGG 0.539534 5_4:+12852517 Msa0838470:CDS
CTACGTGCATTGGAAATTCA+GGG 0.539698 5_4:+12857098 Msa0838470:CDS
AGTAAGCATTCTTCACTCCA+TGG 0.541383 5_4:-12857803 None:intergenic
CCTGAGTATGGTGCAACCAT+GGG 0.541499 5_4:+12854017 Msa0838470:CDS
AGAAGAGAAGAATAGTCGGT+AGG 0.542439 5_4:-12851917 None:intergenic
TGTCAGAAATACAAGAGTGA+GGG 0.542842 5_4:+12858472 Msa0838470:intron
ACTCAAATGCTAAGAAAGCA+TGG 0.543411 5_4:+12853802 Msa0838470:CDS
TCACGGTGGTGACAGACAAT+GGG 0.543646 5_4:+12858847 Msa0838470:CDS
CAACGAGAGGAGGAGAAGCT+AGG 0.543894 5_4:-12857311 None:intergenic
AACCGTATTTGAATCAGCTA+GGG 0.544435 5_4:+12857050 Msa0838470:CDS
TGCAAAGGGACCAATGCTAC+TGG 0.546307 5_4:+12858555 Msa0838470:CDS
CAGATAAACTATTCCACATA+GGG 0.547368 5_4:-12857686 None:intergenic
TGAGTACACTCTCTCCACTT+GGG 0.547848 5_4:-12854325 None:intergenic
AATATTTGAAACTGACCGGC+AGG 0.549997 5_4:+12854069 Msa0838470:CDS
TTGCAATATTTGAAACTGAC+CGG 0.550545 5_4:+12854065 Msa0838470:CDS
TAAACTATTAGGTGAAGCCA+TGG 0.550892 5_4:+12856866 Msa0838470:intron
TCTGTAAGGTATCTGGCTGC+AGG 0.551655 5_4:-12857897 None:intergenic
TTGTACTGAGGAGCGTTGAA+AGG 0.551857 5_4:+12859375 Msa0838470:three_prime_UTR
ATAAGTTGATGTAGAGTCCC+AGG 0.552294 5_4:-12857730 None:intergenic
TTTACGTACTGTGCCGGCAA+GGG 0.553925 5_4:-12857343 None:intergenic
CTATTTATATCAATAAACTA+AGG 0.554096 5_4:+12859175 Msa0838470:three_prime_UTR
ATGTTGAAAAGATTATTGAT+TGG 0.554826 5_4:+12852468 Msa0838470:CDS
ACGTTGGAAAAGCCAGGTGG+TGG 0.555128 5_4:+12852200 Msa0838470:CDS
TACTGTGCCGGCAAGGGCAT+AGG 0.555653 5_4:-12857337 None:intergenic
ATGAGTACACTCTCTCCACT+TGG 0.556916 5_4:-12854326 None:intergenic
TCCTTTGTGTTTCAAGTCTG+GGG 0.556949 5_4:+12858734 Msa0838470:CDS
AAACTAAGGAACTCAGGTGG+AGG 0.557540 5_4:+12859189 Msa0838470:three_prime_UTR
CTCAGGAGACATGTTTGCTA+TGG 0.557582 5_4:-12854000 None:intergenic
ACCGGTCAATCCAAGAGTAT+CGG 0.559771 5_4:-12858763 None:intergenic
AGAGTTGTGTTCAACACAAA+TGG 0.563493 5_4:+12853257 Msa0838470:CDS
CCCATGGTTGCACCATACTC+AGG 0.564301 5_4:-12854017 None:intergenic
ATTTACGTACTGTGCCGGCA+AGG 0.564724 5_4:-12857344 None:intergenic
GAGTACACTCTCTCCACTTG+GGG 0.565090 5_4:-12854324 None:intergenic
ACGTAGCTACAAGAAAGCTC+AGG 0.566913 5_4:-12859420 None:intergenic
CAGGCAAGGTCAACAACAGC+AGG 0.566921 5_4:-12852691 None:intergenic
ATCAAAACAAGTCTTGCTCC+AGG 0.567350 5_4:+12856889 Msa0838470:CDS
TACAGTTTCATCACTCCTGC+CGG 0.568564 5_4:-12854084 None:intergenic
ACAACTATGATTGATGGCTT+GGG 0.571543 5_4:+12853320 Msa0838470:CDS
ACCTGAAGAAGCACCCTAGC+CGG 0.572149 5_4:-12852530 None:intergenic
TTGACGACGTTGGAAAAGCC+AGG 0.574977 5_4:+12852194 Msa0838470:CDS
ACAGATAAACTATTCCACAT+AGG 0.575613 5_4:-12857687 None:intergenic
CCCTCGTTAATGGATGAACT+CGG 0.576207 5_4:-12857281 None:intergenic
TCTGCTATTTCTTCACTGGA+TGG 0.578737 5_4:-12857502 None:intergenic
TAAACCCAACTTTATTGTTG+AGG 0.579324 5_4:-12854914 None:intergenic
TCCTGAGTATGGTGCAACCA+TGG 0.580788 5_4:+12854016 Msa0838470:CDS
CAACAACATATTGACGACGT+TGG 0.581221 5_4:+12852184 Msa0838470:CDS
CATGACACATCTGCTATGCT+AGG 0.582144 5_4:-12859497 None:intergenic
ACATATAATGCTATTACCAA+AGG 0.582871 5_4:+12857660 Msa0838470:CDS
ACTGATAACTTCTCCCCAGA+AGG 0.585751 5_4:-12858062 None:intergenic
AGCCAAGGTCCTTTCAATGT+GGG 0.586632 5_4:+12859132 Msa0838470:three_prime_UTR
AATGGTGTAACGTTCATGAC+CGG 0.587845 5_4:-12858781 None:intergenic
CAATCTCAATCTCTTACCAT+GGG 0.590977 5_4:+12852012 Msa0838470:exon
TGCAAAGTGACATGATCCAC+GGG 0.593519 5_4:-12854047 None:intergenic
CGAGACGCGATGAACAGGCT+TGG 0.594055 5_4:+12852718 Msa0838470:CDS
ACTGACCACATCTCTCCAGC+TGG 0.596487 5_4:+12857855 Msa0838470:CDS
TTAGTAACTACACCAGAACC+TGG 0.597654 5_4:-12856907 None:intergenic
CTCATGCCTTTAAAATAAGG+TGG 0.600089 5_4:-12857762 None:intergenic
GTAAGCATTCTTCACTCCAT+GGG 0.600608 5_4:-12857802 None:intergenic
GCCAGATACCTTACAGAACG+TGG 0.602603 5_4:+12857903 Msa0838470:CDS
TTGCAAAGTGACATGATCCA+CGG 0.602915 5_4:-12854048 None:intergenic
GCATAGGCAACAACGAGAGG+AGG 0.603075 5_4:-12857321 None:intergenic
AGATTTGGTTTCCTCAAATG+GGG 0.603282 5_4:+12852977 Msa0838470:CDS
CCGTGGCAATGATGAGGTGA+TGG 0.604493 5_4:+12857962 Msa0838470:CDS
GCTGGTGCAGAGTATGGGAG+TGG 0.608387 5_4:+12858514 Msa0838470:CDS
AACTAAGGAACTCAGGTGGA+GGG 0.610129 5_4:+12859190 Msa0838470:three_prime_UTR
AGGGCATAGGCAACAACGAG+AGG 0.611221 5_4:-12857324 None:intergenic
ATTCACCGTAGTAATTTGGT+GGG 0.612191 5_4:+12858699 Msa0838470:CDS
TGTTGCATTGCAGCCCCAAG+TGG 0.613560 5_4:+12854311 Msa0838470:intron
ACATGCTTTCTTTGCAACCA+AGG 0.613644 5_4:-12856494 None:intergenic
CCATTCCCACCAAATTACTA+CGG 0.614199 5_4:-12858704 None:intergenic
TGGTGTCACAGCTACCGACT+TGG 0.615205 5_4:+12853768 Msa0838470:CDS
GAATACTTCTCCTAAACAGG+TGG 0.615442 5_4:+12852493 Msa0838470:CDS
AACTATACATGTTCCTTCTG+GGG 0.616489 5_4:+12858049 Msa0838470:CDS
AACCATGGGATTCTTTCCCG+TGG 0.617106 5_4:+12854031 Msa0838470:CDS
GATCTCCTTGAAGAAATAAG+GGG 0.618717 5_4:+12859555 Msa0838470:three_prime_UTR
TTCAAAGTAACACGGTCATG+AGG 0.622209 5_4:-12854864 None:intergenic
GGTGGAGATTCCATTCAAGC+CGG 0.622548 5_4:+12852511 Msa0838470:CDS
TTGTCAGAAATACAAGAGTG+AGG 0.622999 5_4:+12858471 Msa0838470:intron
ACTTGAATTCCAGAGGAACA+AGG 0.623220 5_4:+12852952 Msa0838470:CDS
CCATCACCTCATCATTGCCA+CGG 0.625198 5_4:-12857962 None:intergenic
TCGCGTCTCGCATACAGGCA+AGG 0.625898 5_4:-12852705 None:intergenic
TGGTTACTTTCAGGTACCGG+TGG 0.626744 5_4:+12852859 Msa0838470:intron
AATGTGGAATGGGTCAGCCA+AGG 0.627330 5_4:+12859117 Msa0838470:three_prime_UTR
CAGCCAAGGTCCTTTCAATG+TGG 0.627779 5_4:+12859131 Msa0838470:three_prime_UTR
ACACCAGCAAAACTTAAGCA+CGG 0.629241 5_4:+12856403 Msa0838470:CDS
TACCTCTGTATCAAATCTCA+GGG 0.631164 5_4:-12858886 None:intergenic
TCGACCTGGTCAAGATATCA+CGG 0.632288 5_4:+12858830 Msa0838470:CDS
AACTCCTATGGAAGTCGCCG+TGG 0.634766 5_4:+12857945 Msa0838470:CDS
CGAGCCCATTGGGATTGCGA+AGG 0.635287 5_4:+12857447 Msa0838470:CDS
CCAGATACCTTACAGAACGT+GGG 0.637037 5_4:+12857904 Msa0838470:CDS
TCATTTCTTTCAAAGTAACA+CGG 0.643277 5_4:-12854872 None:intergenic
CAAGGTCCTTTCAATGTGGG+AGG 0.646053 5_4:+12859135 Msa0838470:three_prime_UTR
GCAGCTCCAAGCATTACACT+AGG 0.646576 5_4:-12856472 None:intergenic
TCCCCAGACTTGAAACACAA+AGG 0.647032 5_4:-12858735 None:intergenic
GTCAGAAATACAAGAGTGAG+GGG 0.648014 5_4:+12858473 Msa0838470:intron
ATGGTGGCACGATCAGCCAA+AGG 0.648173 5_4:-12853981 None:intergenic
TGATCAATGACAAGATCCAC+CGG 0.654341 5_4:-12852875 None:intergenic
AATGATGAGGTGATGGCAAG+AGG 0.654631 5_4:+12857969 Msa0838470:CDS
ATATGGAACTTGAATTCCAG+AGG 0.657342 5_4:+12852945 Msa0838470:CDS
TCAAATGCTAAGAAAGCATG+GGG 0.657887 5_4:+12853804 Msa0838470:CDS
TACCCTGAGATTTGATACAG+AGG 0.662454 5_4:+12858884 Msa0838470:CDS
AATAAACTAAGGAACTCAGG+TGG 0.663587 5_4:+12859186 Msa0838470:three_prime_UTR
GTCAACAACAGCAGGCACCC+CGG 0.664428 5_4:-12852683 None:intergenic
TGTTGAACACAACTCTACCA+AGG 0.667926 5_4:-12853250 None:intergenic
GATGTTTGTGGACTACAATG+AGG 0.668887 5_4:+12854207 Msa0838470:CDS
ACAGAGAGCGTGAAGAACGA+AGG 0.669112 5_4:-12851955 None:intergenic
ACCACCGTGATATCTTGACC+AGG 0.670639 5_4:-12858834 None:intergenic
TGCTGCCAGCTGGAGAGATG+TGG 0.672724 5_4:-12857860 None:intergenic
CAGGCATAAAGATTGCCAGA+TGG 0.675748 5_4:-12857711 None:intergenic
GCCGAGTTCATCCATTAACG+AGG 0.677700 5_4:+12857280 Msa0838470:CDS
CTTGCTTACTTCAATCATGG+AGG 0.678662 5_4:+12859029 Msa0838470:CDS
TACGTGCATTGGAAATTCAG+GGG 0.678899 5_4:+12857099 Msa0838470:CDS
CCGAGTTCATCCATTAACGA+GGG 0.684574 5_4:+12857281 Msa0838470:CDS
ATCCACGGGAAAGAATCCCA+TGG 0.685318 5_4:-12854033 None:intergenic
CAGATACCTTACAGAACGTG+GGG 0.688556 5_4:+12857905 Msa0838470:CDS
TTATTAGGCAAACTACGAAG+TGG 0.689687 5_4:+12853748 Msa0838470:intron
ATAAAGCATAAATTGTACTG+AGG 0.693323 5_4:+12859363 Msa0838470:three_prime_UTR
TTCACTCCATGGGAGCCTGG+GGG 0.697438 5_4:-12857792 None:intergenic
TGGACTATTCCTGATCCAGG+AGG 0.704408 5_4:-12853031 None:intergenic
AAGTCGCCGTGGCAATGATG+AGG 0.705595 5_4:+12857956 Msa0838470:CDS
AGTGTGAATGAAATTCGACC+TGG 0.706408 5_4:+12858816 Msa0838470:CDS
ACCAGCAAAACTTAAGCACG+GGG 0.706746 5_4:+12856405 Msa0838470:CDS
AGCTGGAGAGATGTGGTCAG+TGG 0.714350 5_4:-12857853 None:intergenic
AGTAACAGTCAAGACCAAGT+CGG 0.722413 5_4:-12853782 None:intergenic
GAAGTTATCAGTCTTCGATG+CGG 0.731127 5_4:+12858073 Msa0838470:CDS
ACGACGTTGGAAAAGCCAGG+TGG 0.766873 5_4:+12852197 Msa0838470:CDS
ACCTGGTCAAGATATCACGG+TGG 0.812027 5_4:+12858833 Msa0838470:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GTGTAATAAATTTAAAATTT+TGG + chr5_4:12852839-12852858 Msa0838470:intron 10.0%
!!! CAATATTTTAATCTTAATAA+GGG - chr5_4:12854490-12854509 None:intergenic 10.0%
!!! ACAATATTTTAATCTTAATA+AGG - chr5_4:12854491-12854510 None:intergenic 10.0%
!! TAGAAAATAACAAATTATTA+GGG - chr5_4:12856811-12856830 None:intergenic 10.0%
!!! ATATAATTTTATTTATATGG+TGG - chr5_4:12857559-12857578 None:intergenic 10.0%
!! TATAAAACGATTATTATCTA+AGG - chr5_4:12853927-12853946 None:intergenic 15.0%
!!! TTATTTTCCTTAATTTTAAG+TGG - chr5_4:12854427-12854446 None:intergenic 15.0%
!!! TTGTTTAATCATATATTTTG+AGG + chr5_4:12854622-12854641 Msa0838470:intron 15.0%
!!! TAAATGAAATTTTGTAAACT+TGG - chr5_4:12855258-12855277 None:intergenic 15.0%
!!! TAATATGCGATTTAAAATAT+AGG + chr5_4:12855322-12855341 Msa0838470:intron 15.0%
!!! GTATCAAATTTTAGATAATT+TGG - chr5_4:12855382-12855401 None:intergenic 15.0%
!! AGAAAATAACAAATTATTAG+GGG - chr5_4:12856810-12856829 None:intergenic 15.0%
!! GTAGAAAATAACAAATTATT+AGG - chr5_4:12856812-12856831 None:intergenic 15.0%
!! TAAAAACATAAAAGCAAAAA+AGG - chr5_4:12858231-12858250 None:intergenic 15.0%
!! CTATTTATATCAATAAACTA+AGG + chr5_4:12859175-12859194 Msa0838470:three_prime_UTR 15.0%
!! AGAAATGAGAAAATTAAATC+TGG - chr5_4:12852087-12852106 None:intergenic 20.0%
!!! TCGTTTTCTTTAATTATTAC+CGG + chr5_4:12852281-12852300 Msa0838470:intron 20.0%
!! ATGTTGAAAAGATTATTGAT+TGG + chr5_4:12852468-12852487 Msa0838470:CDS 20.0%
!!! TGTTTTTGATTTCTTTTATC+AGG + chr5_4:12852654-12852673 Msa0838470:intron 20.0%
!!! TTAAAATTTTGGTTACTTTC+AGG + chr5_4:12852850-12852869 Msa0838470:intron 20.0%
!! TTTCAAAAGTTGTCAAAATA+TGG - chr5_4:12853481-12853500 None:intergenic 20.0%
!!! TCATAAAAGTTGTCTAAAAT+TGG + chr5_4:12853596-12853615 Msa0838470:intron 20.0%
!!! TTTTATATTTCCTTTATGCA+GGG + chr5_4:12853940-12853959 Msa0838470:intron 20.0%
!!! ATGTTTTCCACTTAAAATTA+AGG + chr5_4:12854417-12854436 Msa0838470:intron 20.0%
!!! ATTTTAATCTTAATAAGGGA+AGG - chr5_4:12854486-12854505 None:intergenic 20.0%
!! TACATTACAGATAATATGTA+TGG - chr5_4:12854958-12854977 None:intergenic 20.0%
!! TGTAATGCCTAAATATAAAA+TGG + chr5_4:12854974-12854993 Msa0838470:intron 20.0%
!! TTTCAGTTTAATGATTTGAT+TGG - chr5_4:12855220-12855239 None:intergenic 20.0%
!! AATACAATATCTTCCTAATT+TGG + chr5_4:12855928-12855947 Msa0838470:intron 20.0%
!! ATACAATATCTTCCTAATTT+GGG + chr5_4:12855929-12855948 Msa0838470:intron 20.0%
!! AAATACTCTTTCAAAAAATG+TGG + chr5_4:12856086-12856105 Msa0838470:intron 20.0%
!! GAAAATAACAAATTATTAGG+GGG - chr5_4:12856809-12856828 None:intergenic 20.0%
!! CAAGTAATACCATTTATAAA+AGG - chr5_4:12857172-12857191 None:intergenic 20.0%
!! TAATTTGGACATTATTATTC+AGG + chr5_4:12857405-12857424 Msa0838470:intron 20.0%
!!! TTCATATTTATCCTATTTTC+AGG + chr5_4:12857599-12857618 Msa0838470:intron 20.0%
!! GCTCTTGATTAAAAAATATA+TGG - chr5_4:12858189-12858208 None:intergenic 20.0%
!! ATTGTCATATATAACATCAT+GGG + chr5_4:12858261-12858280 Msa0838470:intron 20.0%
!! AAGAATATAATGCTTGAATT+TGG + chr5_4:12858432-12858451 Msa0838470:intron 20.0%
!! TTAACATTGTCTAAATAATG+TGG + chr5_4:12859101-12859120 Msa0838470:three_prime_UTR 20.0%
!!! AAAAGTATCCTTATTGAGTA+AGG - chr5_4:12852401-12852420 None:intergenic 25.0%
!! TTACTCAATAAGGATACTTT+TGG + chr5_4:12852400-12852419 Msa0838470:CDS 25.0%
!! TTCTTTTATCAGGATTTTAC+CGG + chr5_4:12852664-12852683 Msa0838470:intron 25.0%
! TTCGAATAAAATTAACCCAT+TGG + chr5_4:12852747-12852766 Msa0838470:CDS 25.0%
!! TTTTTGTCCAATAAAAAGAG+AGG + chr5_4:12853562-12853581 Msa0838470:intron 25.0%
! TACATATGCATTTCTAATAG+AGG - chr5_4:12853638-12853657 None:intergenic 25.0%
! TCTACTAACAGGTTAATAAT+TGG - chr5_4:12853668-12853687 None:intergenic 25.0%
!!! AGATAATTGTTTCTACTAAC+AGG - chr5_4:12853679-12853698 None:intergenic 25.0%
!! GTTTTATATTTCCTTTATGC+AGG + chr5_4:12853939-12853958 Msa0838470:intron 25.0%
! TTTATATTTCCTTTATGCAG+GGG + chr5_4:12853941-12853960 Msa0838470:intron 25.0%
!! TATGCATGCATATATTGTTT+TGG + chr5_4:12854235-12854254 Msa0838470:intron 25.0%
!! ATGCATGCATATATTGTTTT+GGG + chr5_4:12854236-12854255 Msa0838470:intron 25.0%
! ATTGTTACATGCAATTATCT+AGG + chr5_4:12854506-12854525 Msa0838470:intron 25.0%
! CTTAAATAAGATTTCAGAGT+TGG - chr5_4:12854555-12854574 None:intergenic 25.0%
! ATATAAAGACCACATTCATT+CGG + chr5_4:12854646-12854665 Msa0838470:intron 25.0%
! TCATTTCTTTCAAAGTAACA+CGG - chr5_4:12854875-12854894 None:intergenic 25.0%
!!! AGCTATGCCATTTTATATTT+AGG - chr5_4:12854984-12855003 None:intergenic 25.0%
! TATACAAATGTAAGCATCAT+GGG - chr5_4:12855018-12855037 None:intergenic 25.0%
! ATATACAAATGTAAGCATCA+TGG - chr5_4:12855019-12855038 None:intergenic 25.0%
! ATTGAGACATATCTATGTTT+AGG - chr5_4:12855111-12855130 None:intergenic 25.0%
! TAAACTTGGTATATTCATGT+GGG - chr5_4:12855244-12855263 None:intergenic 25.0%
! CATAGGTATGTAATTAATGA+TGG - chr5_4:12855354-12855373 None:intergenic 25.0%
! TAGATAATTTGGATGTTCAT+AGG - chr5_4:12855371-12855390 None:intergenic 25.0%
! ATGCAACATGATTAAAAGTT+TGG + chr5_4:12855419-12855438 Msa0838470:intron 25.0%
! AAGAAATACAAGACTTTAAG+AGG + chr5_4:12855870-12855889 Msa0838470:intron 25.0%
!! AGAAATACAAGACTTTAAGA+GGG + chr5_4:12855871-12855890 Msa0838470:intron 25.0%
! TACAATATCTTCCTAATTTG+GGG + chr5_4:12855930-12855949 Msa0838470:intron 25.0%
! TAAAACTAGCTAGAAAACAA+AGG - chr5_4:12856656-12856675 None:intergenic 25.0%
! AAATACACGTATTTAACTAC+TGG - chr5_4:12856752-12856771 None:intergenic 25.0%
! TAGTTAAATACGTGTATTTG+AGG + chr5_4:12856753-12856772 Msa0838470:intron 25.0%
!! TGAAGTATTTGCTCATAATA+TGG + chr5_4:12856962-12856981 Msa0838470:intron 25.0%
!! GGTACATATCCTTTTATAAA+TGG + chr5_4:12857160-12857179 Msa0838470:intron 25.0%
!! AGATTTTCTTCAGAGATATT+TGG + chr5_4:12857479-12857498 Msa0838470:CDS 25.0%
! ATATGTTTCCCTAAACATAT+CGG - chr5_4:12857646-12857665 None:intergenic 25.0%
! ACATATAATGCTATTACCAA+AGG + chr5_4:12857660-12857679 Msa0838470:CDS 25.0%
! TTTGTTCACAATACGAATAT+TGG - chr5_4:12858003-12858022 None:intergenic 25.0%
! ATTGTGAACAAATTCCTAAA+TGG + chr5_4:12858011-12858030 Msa0838470:CDS 25.0%
! GATTGTCATATATAACATCA+TGG + chr5_4:12858260-12858279 Msa0838470:intron 25.0%
!! TCTTAAATTTGATTTACACG+CGG - chr5_4:12858302-12858321 None:intergenic 25.0%
!!! CATTAAATTTCTAGAGTTGA+CGG - chr5_4:12858409-12858428 None:intergenic 25.0%
!! ATTGATTCATTATTGTTCCT+AGG + chr5_4:12858641-12858660 Msa0838470:intron 25.0%
! TTGATTCATTATTGTTCCTA+GGG + chr5_4:12858642-12858661 Msa0838470:intron 25.0%
!!! TGCTTTTTCATCTTTTTTTG+TGG + chr5_4:12858925-12858944 Msa0838470:intron 25.0%
!!! GCTTTTTCATCTTTTTTTGT+GGG + chr5_4:12858926-12858945 Msa0838470:intron 25.0%
!!! CTTTTTCATCTTTTTTTGTG+GGG + chr5_4:12858927-12858946 Msa0838470:intron 25.0%
!! TTTTTATCCTGCTTATGTTT+CGG + chr5_4:12858987-12859006 Msa0838470:intron 25.0%
! ATTGTCTAAATAATGTGGAA+TGG + chr5_4:12859106-12859125 Msa0838470:three_prime_UTR 25.0%
! TTGTCTAAATAATGTGGAAT+GGG + chr5_4:12859107-12859126 Msa0838470:three_prime_UTR 25.0%
! TTTACATTCTAGTGAATATC+AGG + chr5_4:12859317-12859336 Msa0838470:three_prime_UTR 25.0%
!! GTGAATATCAGGAATTTTTA+TGG + chr5_4:12859328-12859347 Msa0838470:three_prime_UTR 25.0%
! ATAAAGCATAAATTGTACTG+AGG + chr5_4:12859363-12859382 Msa0838470:three_prime_UTR 25.0%
! GAGTGTATTAATCAGATTAA+GGG - chr5_4:12859474-12859493 None:intergenic 25.0%
! TGAGTGTATTAATCAGATTA+AGG - chr5_4:12859475-12859494 None:intergenic 25.0%
! CATATTATTTACAACTTCCT+GGG - chr5_4:12859531-12859550 None:intergenic 25.0%
! ACATATTATTTACAACTTCC+TGG - chr5_4:12859532-12859551 None:intergenic 25.0%
AACGAAGGTAATAATAAGAG+AGG - chr5_4:12851943-12851962 None:intergenic 30.0%
! TCTTTTATCAGGATTTTACC+GGG + chr5_4:12852665-12852684 Msa0838470:intron 30.0%
! AAAGATTTGGTTTCCTCAAA+TGG + chr5_4:12852975-12852994 Msa0838470:CDS 30.0%
! AAGATTTGGTTTCCTCAAAT+GGG + chr5_4:12852976-12852995 Msa0838470:CDS 30.0%
AGAAGACAAACTAGAATAAC+TGG - chr5_4:12853185-12853204 None:intergenic 30.0%
! TTTGCAAATTCAACTTTTGC+AGG + chr5_4:12853214-12853233 Msa0838470:intron 30.0%
AATCATAGTTGTGTGTGAAT+CGG - chr5_4:12853312-12853331 None:intergenic 30.0%
! CACTTTTCCTCTCTTTTTAT+TGG - chr5_4:12853572-12853591 None:intergenic 30.0%
CAATAAAAAGAGAGGAAAAG+TGG + chr5_4:12853570-12853589 Msa0838470:intron 30.0%
GAAAGATTGATTAATCAGCT+AGG - chr5_4:12853905-12853924 None:intergenic 30.0%
! TTGCAATATTTGAAACTGAC+CGG + chr5_4:12854065-12854084 Msa0838470:CDS 30.0%
CATCTTATTAGCTCGTAAAT+AGG - chr5_4:12854191-12854210 None:intergenic 30.0%
GTGATGCAAAATAAAAGGAA+TGG - chr5_4:12854455-12854474 None:intergenic 30.0%
GTGTAGTGATGCAAAATAAA+AGG - chr5_4:12854460-12854479 None:intergenic 30.0%
AAATAAGATTTCAGAGTTGG+TGG - chr5_4:12854552-12854571 None:intergenic 30.0%
GTTTGTGTGGTAAATTATAG+AGG + chr5_4:12854767-12854786 Msa0838470:intron 30.0%
GTGGTAAATTATAGAGGAAT+CGG + chr5_4:12854773-12854792 Msa0838470:intron 30.0%
! ACATTCAGTTTTTCATTGTG+TGG + chr5_4:12854818-12854837 Msa0838470:intron 30.0%
!! TCCTTGCTTTAAATCTTTTC+AGG + chr5_4:12854841-12854860 Msa0838470:intron 30.0%
TGAAAGAAATGAAAGCAGAT+TGG + chr5_4:12854883-12854902 Msa0838470:CDS 30.0%
TAAACCCAACTTTATTGTTG+AGG - chr5_4:12854917-12854936 None:intergenic 30.0%
CAACAATAAAGTTGGGTTTA+AGG + chr5_4:12854917-12854936 Msa0838470:CDS 30.0%
CCATATTTGAAAACGAAACA+TGG - chr5_4:12855044-12855063 None:intergenic 30.0%
! CCATGTTTCGTTTTCAAATA+TGG + chr5_4:12855041-12855060 Msa0838470:intron 30.0%
ATTTAGTGAAAATTGCCCAT+TGG - chr5_4:12855078-12855097 None:intergenic 30.0%
ACATATCTATGTTTAGGTGT+AGG - chr5_4:12855105-12855124 None:intergenic 30.0%
GTAAACTTGGTATATTCATG+TGG - chr5_4:12855245-12855264 None:intergenic 30.0%
CATATTATGTTACTGTAAGG+TGG - chr5_4:12855309-12855328 None:intergenic 30.0%
TCGCATATTATGTTACTGTA+AGG - chr5_4:12855312-12855331 None:intergenic 30.0%
ATCAAGTGTTAGTTATGCTT+AGG + chr5_4:12855473-12855492 Msa0838470:intron 30.0%
! ATGATATGATTTTACACCCT+CGG + chr5_4:12855618-12855637 Msa0838470:intron 30.0%
GTGAGAGAAACATTATTCTA+TGG + chr5_4:12855668-12855687 Msa0838470:intron 30.0%
AAAGCATACATTCTAGATAG+TGG - chr5_4:12855723-12855742 None:intergenic 30.0%
! GAAATACAAGACTTTAAGAG+GGG + chr5_4:12855872-12855891 Msa0838470:intron 30.0%
! AAATACAAGACTTTAAGAGG+GGG + chr5_4:12855873-12855892 Msa0838470:intron 30.0%
ACAATATCTTCCTAATTTGG+GGG + chr5_4:12855931-12855950 Msa0838470:intron 30.0%
!! TAATGTCTTAGGCTTTGTTT+GGG - chr5_4:12856169-12856188 None:intergenic 30.0%
!! TTAATGTCTTAGGCTTTGTT+TGG - chr5_4:12856170-12856189 None:intergenic 30.0%
TGTAACAATGCAATACGATA+CGG - chr5_4:12856325-12856344 None:intergenic 30.0%
TATCGTATTGCATTGTTACA+GGG + chr5_4:12856325-12856344 Msa0838470:intron 30.0%
!! AACTTTGTCTGAGATTCTTT+TGG - chr5_4:12856361-12856380 None:intergenic 30.0%
! ATTTGAGGTATTTGTACAAC+TGG - chr5_4:12856452-12856471 None:intergenic 30.0%
TCGCTAATGTGAAACAAAAA+GGG - chr5_4:12856700-12856719 None:intergenic 30.0%
ATCGCTAATGTGAAACAAAA+AGG - chr5_4:12856701-12856720 None:intergenic 30.0%
AACAAATTATTAGGGGGAAA+TGG - chr5_4:12856803-12856822 None:intergenic 30.0%
AATAGTGAACAGATAGCAAT+CGG - chr5_4:12856838-12856857 None:intergenic 30.0%
TTACTAAGTATTTGCAGAAG+AGG + chr5_4:12856923-12856942 Msa0838470:CDS 30.0%
AGTATTTGCTCATAATATGG+TGG + chr5_4:12856965-12856984 Msa0838470:intron 30.0%
AGCTAGGGTTTAATATAGTT+GGG + chr5_4:12857065-12857084 Msa0838470:CDS 30.0%
! ATTTAATTTACGTACTGTGC+CGG - chr5_4:12857352-12857371 None:intergenic 30.0%
TATGTTTCCCTAAACATATC+GGG - chr5_4:12857645-12857664 None:intergenic 30.0%
CAGATAAACTATTCCACATA+GGG - chr5_4:12857689-12857708 None:intergenic 30.0%
ACAGATAAACTATTCCACAT+AGG - chr5_4:12857690-12857709 None:intergenic 30.0%
AATAGTTTATCTGTTCCATC+TGG + chr5_4:12857696-12857715 Msa0838470:CDS 30.0%
!! ATGCTCATGCCTTTAAAATA+AGG - chr5_4:12857768-12857787 None:intergenic 30.0%
AAATTCCTAAATGGAGAAGT+TGG + chr5_4:12858020-12858039 Msa0838470:CDS 30.0%
! GAAGGAACATGTATAGTTTT+AGG - chr5_4:12858047-12858066 None:intergenic 30.0%
AAAACTATACATGTTCCTTC+TGG + chr5_4:12858047-12858066 Msa0838470:CDS 30.0%
AAACTATACATGTTCCTTCT+GGG + chr5_4:12858048-12858067 Msa0838470:CDS 30.0%
CATAAAAGCAAAAAAGGCTT+TGG - chr5_4:12858225-12858244 None:intergenic 30.0%
AGAGTTGACGGAAAAAAAAA+GGG - chr5_4:12858397-12858416 None:intergenic 30.0%
TAGAGTTGACGGAAAAAAAA+AGG - chr5_4:12858398-12858417 None:intergenic 30.0%
AAAGATGAAAAAGCAAGACA+TGG - chr5_4:12858920-12858939 None:intergenic 30.0%
TAAATAACCGAAACATAAGC+AGG - chr5_4:12858997-12859016 None:intergenic 30.0%
ATGTTTCGGTTATTTATGTC+AGG + chr5_4:12859001-12859020 Msa0838470:intron 30.0%
ATCAATAAACTAAGGAACTC+AGG + chr5_4:12859183-12859202 Msa0838470:three_prime_UTR 30.0%
TCTGTTTACGAGAATAAAAG+TGG + chr5_4:12859267-12859286 Msa0838470:three_prime_UTR 30.0%
!! CGAGAATAAAAGTGGTTTTA+CGG + chr5_4:12859275-12859294 Msa0838470:three_prime_UTR 30.0%
ATGATCTCCTTGAAGAAATA+AGG + chr5_4:12859553-12859572 Msa0838470:three_prime_UTR 30.0%
TGATCTCCTTGAAGAAATAA+GGG + chr5_4:12859554-12859573 Msa0838470:three_prime_UTR 30.0%
TCAATCTCAATCTCTTACCA+TGG + chr5_4:12852011-12852030 Msa0838470:exon 35.0%
CAATCTCAATCTCTTACCAT+GGG + chr5_4:12852012-12852031 Msa0838470:exon 35.0%
GTCGTCAATATGTTGTTGAA+TGG - chr5_4:12852182-12852201 None:intergenic 35.0%
ATGCACTTCCTTACTCAATA+AGG + chr5_4:12852390-12852409 Msa0838470:CDS 35.0%
GAAGAATACTTCTCCTAAAC+AGG + chr5_4:12852490-12852509 Msa0838470:CDS 35.0%
! CTTTTATCAGGATTTTACCG+GGG + chr5_4:12852666-12852685 Msa0838470:intron 35.0%
TTTGCATCTGTCTTACCAAT+GGG - chr5_4:12852765-12852784 None:intergenic 35.0%
ATTTGCATCTGTCTTACCAA+TGG - chr5_4:12852766-12852785 None:intergenic 35.0%
!! TTTTGGTTACTTTCAGGTAC+CGG + chr5_4:12852856-12852875 Msa0838470:intron 35.0%
AAGATCAGAAAATGCTGTTC+AGG + chr5_4:12852919-12852938 Msa0838470:CDS 35.0%
AAATGCTGTTCAGGCAAATA+TGG + chr5_4:12852928-12852947 Msa0838470:CDS 35.0%
ATATGGAACTTGAATTCCAG+AGG + chr5_4:12852945-12852964 Msa0838470:CDS 35.0%
! AGATTTGGTTTCCTCAAATG+GGG + chr5_4:12852977-12852996 Msa0838470:CDS 35.0%
TGAATGATGCAATAACCTGA+TGG - chr5_4:12853054-12853073 None:intergenic 35.0%
! CAGGTCAATTTAGAATACCT+TGG + chr5_4:12853233-12853252 Msa0838470:intron 35.0%
AGAGTTGTGTTCAACACAAA+TGG + chr5_4:12853257-12853276 Msa0838470:CDS 35.0%
TCACACACAACTATGATTGA+TGG + chr5_4:12853314-12853333 Msa0838470:CDS 35.0%
! ACAACTATGATTGATGGCTT+GGG + chr5_4:12853320-12853339 Msa0838470:CDS 35.0%
GTGGTTGGGTTCAAATTATT+AGG + chr5_4:12853733-12853752 Msa0838470:intron 35.0%
TTATTAGGCAAACTACGAAG+TGG + chr5_4:12853748-12853767 Msa0838470:intron 35.0%
ACTCAAATGCTAAGAAAGCA+TGG + chr5_4:12853802-12853821 Msa0838470:CDS 35.0%
! CTCAAATGCTAAGAAAGCAT+GGG + chr5_4:12853803-12853822 Msa0838470:CDS 35.0%
! TCAAATGCTAAGAAAGCATG+GGG + chr5_4:12853804-12853823 Msa0838470:CDS 35.0%
! GGCAAGTTTGTAGAGTTTTA+TGG + chr5_4:12853832-12853851 Msa0838470:CDS 35.0%
ACGAGCTAATAAGATGTTTG+TGG + chr5_4:12854195-12854214 Msa0838470:CDS 35.0%
TTCAAGATTGAGCTCCAAAT+AGG - chr5_4:12854352-12854371 None:intergenic 35.0%
! ATGAGTACTCGTTACCTTTT+TGG - chr5_4:12854399-12854418 None:intergenic 35.0%
ATGATTAAACAAGCCAGCAA+GGG - chr5_4:12854614-12854633 None:intergenic 35.0%
TATGATTAAACAAGCCAGCA+AGG - chr5_4:12854615-12854634 None:intergenic 35.0%
! GCCTGAAAAGATTTAAAGCA+AGG - chr5_4:12854845-12854864 None:intergenic 35.0%
! GGGTTTAAGGTATTAACTTC+TGG + chr5_4:12854930-12854949 Msa0838470:intron 35.0%
TATGGTTTATCGATAGCCAA+TGG + chr5_4:12855059-12855078 Msa0838470:intron 35.0%
ATGGTTTATCGATAGCCAAT+GGG + chr5_4:12855060-12855079 Msa0838470:intron 35.0%
! TGGTGGAATGAAGTATCATT+TGG - chr5_4:12855289-12855308 None:intergenic 35.0%
ATTATGTTACTGTAAGGTGG+TGG - chr5_4:12855306-12855325 None:intergenic 35.0%
ACACTCTTCAGAATTTCACT+TGG - chr5_4:12855588-12855607 None:intergenic 35.0%
! GAGGGTGTAAAATCATATCA+TGG - chr5_4:12855619-12855638 None:intergenic 35.0%
! TGATATGATTTTACACCCTC+GGG + chr5_4:12855619-12855638 Msa0838470:intron 35.0%
AAACAAAGCCATAAAGCAAC+GGG - chr5_4:12855799-12855818 None:intergenic 35.0%
CAAACAAAGCCATAAAGCAA+CGG - chr5_4:12855800-12855819 None:intergenic 35.0%
GAACTCAACAATTGTATTGG+AGG + chr5_4:12855953-12855972 Msa0838470:intron 35.0%
! ATTGTATTGGAGGAGGATTT+TGG + chr5_4:12855963-12855982 Msa0838470:intron 35.0%
!! TTAGGGGGTTTTAATGTCTT+AGG - chr5_4:12856180-12856199 None:intergenic 35.0%
CCTTGTACTATTAAACTTCC+TGG - chr5_4:12856286-12856305 None:intergenic 35.0%
CCAGGAAGTTTAATAGTACA+AGG + chr5_4:12856283-12856302 Msa0838470:intron 35.0%
GTATCGTATTGCATTGTTAC+AGG + chr5_4:12856324-12856343 Msa0838470:intron 35.0%
AAGCATTACACTAGGATTTG+AGG - chr5_4:12856467-12856486 None:intergenic 35.0%
TCAAATCCTAGTGTAATGCT+TGG + chr5_4:12856466-12856485 Msa0838470:CDS 35.0%
! TGCAAAGAAAGCATGTGATT+TGG + chr5_4:12856501-12856520 Msa0838470:CDS 35.0%
! GCAAAGAAAGCATGTGATTT+GGG + chr5_4:12856502-12856521 Msa0838470:CDS 35.0%
TTAGTCAATGTCTCTGCATT+TGG + chr5_4:12856533-12856552 Msa0838470:intron 35.0%
ATTCATGAGTACATGCACAT+TGG - chr5_4:12856618-12856637 None:intergenic 35.0%
AACTAGCTAGAAAACAAAGG+AGG - chr5_4:12856653-12856672 None:intergenic 35.0%
TTCACATTAGCGATTGTTTG+AGG + chr5_4:12856707-12856726 Msa0838470:intron 35.0%
TAAACTATTAGGTGAAGCCA+TGG + chr5_4:12856866-12856885 Msa0838470:intron 35.0%
AACCGTATTTGAATCAGCTA+GGG + chr5_4:12857050-12857069 Msa0838470:CDS 35.0%
! AACCCTAGCTGATTCAAATA+CGG - chr5_4:12857055-12857074 None:intergenic 35.0%
CAGCTAGGGTTTAATATAGT+TGG + chr5_4:12857064-12857083 Msa0838470:CDS 35.0%
GGGTTTAATATAGTTGGGTA+TGG + chr5_4:12857070-12857089 Msa0838470:CDS 35.0%
TTCAGTAATTGCAGATGCAA+CGG - chr5_4:12857137-12857156 None:intergenic 35.0%
GCATCTGCAATTACTGAAAA+TGG + chr5_4:12857139-12857158 Msa0838470:CDS 35.0%
TGGTATTACTTGTGAATCTG+AGG + chr5_4:12857180-12857199 Msa0838470:intron 35.0%
TCTGGAAATAGGAACTTTGA+GGG + chr5_4:12857258-12857277 Msa0838470:CDS 35.0%
CAAGAAGCAAAATGCATACA+TGG - chr5_4:12857380-12857399 None:intergenic 35.0%
! TTGCTTCTTGCTGTCTAATT+TGG + chr5_4:12857390-12857409 Msa0838470:intron 35.0%
!! TACATCTGCTATTTCTTCAC+TGG - chr5_4:12857509-12857528 None:intergenic 35.0%
GAAGAAATAGCAGATGTAAG+TGG + chr5_4:12857511-12857530 Msa0838470:intron 35.0%
CGATTGTACAACCTGAAAAT+AGG - chr5_4:12857613-12857632 None:intergenic 35.0%
!!! CATGAGCCACCTTATTTTAA+AGG + chr5_4:12857756-12857775 Msa0838470:CDS 35.0%
!! CTCATGCCTTTAAAATAAGG+TGG - chr5_4:12857765-12857784 None:intergenic 35.0%
AACTATACATGTTCCTTCTG+GGG + chr5_4:12858049-12858068 Msa0838470:CDS 35.0%
TTCTTAACCATGTGACATGT+AGG + chr5_4:12858108-12858127 Msa0838470:intron 35.0%
GTCATATATAACATCATGGG+AGG + chr5_4:12858264-12858283 Msa0838470:intron 35.0%
ATTTAAGAGTTTCGACCCTA+CGG + chr5_4:12858314-12858333 Msa0838470:intron 35.0%
TTGTCAGAAATACAAGAGTG+AGG + chr5_4:12858471-12858490 Msa0838470:intron 35.0%
TGTCAGAAATACAAGAGTGA+GGG + chr5_4:12858472-12858491 Msa0838470:intron 35.0%
!!! CACGATACAATTATTTTGGC+TGG + chr5_4:12858496-12858515 Msa0838470:CDS 35.0%
!! TCATAGCAAAAAGCTTTGAG+AGG + chr5_4:12858676-12858695 Msa0838470:CDS 35.0%
ATTCACCGTAGTAATTTGGT+GGG + chr5_4:12858699-12858718 Msa0838470:CDS 35.0%
! ATTCCTTTGTGTTTCAAGTC+TGG + chr5_4:12858732-12858751 Msa0838470:CDS 35.0%
! TTCCTTTGTGTTTCAAGTCT+GGG + chr5_4:12858733-12858752 Msa0838470:CDS 35.0%
TACCTCTGTATCAAATCTCA+GGG - chr5_4:12858889-12858908 None:intergenic 35.0%
ATACCTCTGTATCAAATCTC+AGG - chr5_4:12858890-12858909 None:intergenic 35.0%
AGAAACAGCATCAAAACAGA+CGG - chr5_4:12858956-12858975 None:intergenic 35.0%
! GAACTTGCTTACTTCAATCA+TGG + chr5_4:12859026-12859045 Msa0838470:CDS 35.0%
!! AGCATTGATCAAGTTTCTGA+TGG - chr5_4:12859069-12859088 None:intergenic 35.0%
AATAAACTAAGGAACTCAGG+TGG + chr5_4:12859186-12859205 Msa0838470:three_prime_UTR 35.0%
TATTTACAACTTCCTGGGAT+GGG - chr5_4:12859526-12859545 None:intergenic 35.0%
TTATTTACAACTTCCTGGGA+TGG - chr5_4:12859527-12859546 None:intergenic 35.0%
GATCTCCTTGAAGAAATAAG+GGG + chr5_4:12859555-12859574 Msa0838470:three_prime_UTR 35.0%
! CAAAACCCCTTATTTCTTCA+AGG - chr5_4:12859563-12859582 None:intergenic 35.0%
AATAGTCGGTAGGTGAGAAA+AGG - chr5_4:12851910-12851929 None:intergenic 40.0%
AGAAGAGAAGAATAGTCGGT+AGG - chr5_4:12851920-12851939 None:intergenic 40.0%
GAGGAGAAGAGAAGAATAGT+CGG - chr5_4:12851924-12851943 None:intergenic 40.0%
TGTAAGAGTCTTCTTACCCA+TGG - chr5_4:12852031-12852050 None:intergenic 40.0%
CAACAACATATTGACGACGT+TGG + chr5_4:12852184-12852203 Msa0838470:CDS 40.0%
!! GCTCTCAACGATTCTAGAAT+CGG + chr5_4:12852254-12852273 Msa0838470:CDS 40.0%
GAATACTTCTCCTAAACAGG+TGG + chr5_4:12852493-12852512 Msa0838470:CDS 40.0%
AATGGAATCTCCACCTGTTT+AGG - chr5_4:12852506-12852525 None:intergenic 40.0%
GAATATGTTAATGCTGGGAG+TGG + chr5_4:12852564-12852583 Msa0838470:intron 40.0%
TGATCAATGACAAGATCCAC+CGG - chr5_4:12852878-12852897 None:intergenic 40.0%
TGTCATTGATCACTCTGTTC+AGG + chr5_4:12852886-12852905 Msa0838470:CDS 40.0%
ACTTGAATTCCAGAGGAACA+AGG + chr5_4:12852952-12852971 Msa0838470:CDS 40.0%
CAAATCTTTCCTTGTTCCTC+TGG - chr5_4:12852964-12852983 None:intergenic 40.0%
CAGAGGAACAAGGAAAGATT+TGG + chr5_4:12852962-12852981 Msa0838470:CDS 40.0%
TGTTGAACACAACTCTACCA+AGG - chr5_4:12853253-12853272 None:intergenic 40.0%
! CACAACTATGATTGATGGCT+TGG + chr5_4:12853319-12853338 Msa0838470:CDS 40.0%
AGGTAAAAATAACGCGCTAC+TGG + chr5_4:12853396-12853415 Msa0838470:intron 40.0%
ACACATGTGAGTATGAGAGA+GGG - chr5_4:12853507-12853526 None:intergenic 40.0%
AACACATGTGAGTATGAGAG+AGG - chr5_4:12853508-12853527 None:intergenic 40.0%
AGTAACAGTCAAGACCAAGT+CGG - chr5_4:12853785-12853804 None:intergenic 40.0%
CTAGGAACATGATGCTACAA+AGG - chr5_4:12853887-12853906 None:intergenic 40.0%
TATTTCCTTTATGCAGGGGA+AGG + chr5_4:12853945-12853964 Msa0838470:intron 40.0%
TTGCAAAGTGACATGATCCA+CGG - chr5_4:12854051-12854070 None:intergenic 40.0%
! AATATTTGAAACTGACCGGC+AGG + chr5_4:12854069-12854088 Msa0838470:CDS 40.0%
TTCTTACACGTCTTTCTTGC+AGG + chr5_4:12854150-12854169 Msa0838470:intron 40.0%
! GATGTTTGTGGACTACAATG+AGG + chr5_4:12854207-12854226 Msa0838470:CDS 40.0%
! GAGAGTGTACTCATCCTATT+TGG + chr5_4:12854335-12854354 Msa0838470:CDS 40.0%
!! TAAGATTTCAGAGTTGGTGG+TGG - chr5_4:12854549-12854568 None:intergenic 40.0%
TCAGTTAAGCCGAATGAATG+TGG - chr5_4:12854658-12854677 None:intergenic 40.0%
TGTTACATTCGACAACGTTG+TGG + chr5_4:12854736-12854755 Msa0838470:intron 40.0%
TTCAAAGTAACACGGTCATG+AGG - chr5_4:12854867-12854886 None:intergenic 40.0%
CCTGCCTCAACAATAAAGTT+GGG + chr5_4:12854910-12854929 Msa0838470:CDS 40.0%
GTTATGCTTAGGCTTATGTG+TGG + chr5_4:12855484-12855503 Msa0838470:intron 40.0%
TCATGCCTTTAGTGCATGAT+AGG + chr5_4:12855534-12855553 Msa0838470:intron 40.0%
TCCATCCTATCATGCACTAA+AGG - chr5_4:12855542-12855561 None:intergenic 40.0%
CAGAATTTCACTTGGCAAGA+TGG - chr5_4:12855580-12855599 None:intergenic 40.0%
! GATATGATTTTACACCCTCG+GGG + chr5_4:12855620-12855639 Msa0838470:intron 40.0%
! ATATGATTTTACACCCTCGG+GGG + chr5_4:12855621-12855640 Msa0838470:intron 40.0%
TTTCTCTCACTTCGCATTGT+TGG - chr5_4:12855658-12855677 None:intergenic 40.0%
TAAAGCAACGGGTGCAAATA+GGG - chr5_4:12855788-12855807 None:intergenic 40.0%
ATAAAGCAACGGGTGCAAAT+AGG - chr5_4:12855789-12855808 None:intergenic 40.0%
! TATTTGCACCCGTTGCTTTA+TGG + chr5_4:12855788-12855807 Msa0838470:intron 40.0%
!! TATGGCTTTGTTTGCGAGTT+TGG + chr5_4:12855806-12855825 Msa0838470:intron 40.0%
TTGTTGAGTTCCCCCAAATT+AGG - chr5_4:12855944-12855963 None:intergenic 40.0%
GGGGAACTCAACAATTGTAT+TGG + chr5_4:12855950-12855969 Msa0838470:intron 40.0%
CTCAACAATTGTATTGGAGG+AGG + chr5_4:12855956-12855975 Msa0838470:intron 40.0%
! TATTGGAGGAGGATTTTGGA+GGG + chr5_4:12855967-12855986 Msa0838470:intron 40.0%
!! TTAGGCTTTGTTTGGGAGTT+TGG - chr5_4:12856162-12856181 None:intergenic 40.0%
AAAAGTGAACGGCATTCTTG+AGG - chr5_4:12856206-12856225 None:intergenic 40.0%
CCAATGCAGTCAAAAGTGAA+CGG - chr5_4:12856217-12856236 None:intergenic 40.0%
TGCAATGAGCACATTCTTCA+GGG - chr5_4:12856259-12856278 None:intergenic 40.0%
ATGCAATGAGCACATTCTTC+AGG - chr5_4:12856260-12856279 None:intergenic 40.0%
ACACCAGCAAAACTTAAGCA+CGG + chr5_4:12856403-12856422 Msa0838470:CDS 40.0%
ACATGCTTTCTTTGCAACCA+AGG - chr5_4:12856497-12856516 None:intergenic 40.0%
!!! GCAAGACTTGTTTTGATCCA+TGG - chr5_4:12856886-12856905 None:intergenic 40.0%
ATCAAAACAAGTCTTGCTCC+AGG + chr5_4:12856889-12856908 Msa0838470:CDS 40.0%
TTAGTAACTACACCAGAACC+TGG - chr5_4:12856910-12856929 None:intergenic 40.0%
!! ATCCTGTATTGCTTTTGCAG+TGG + chr5_4:12857022-12857041 Msa0838470:intron 40.0%
CAACCGTATTTGAATCAGCT+AGG + chr5_4:12857049-12857068 Msa0838470:CDS 40.0%
ACTACGTGCATTGGAAATTC+AGG + chr5_4:12857097-12857116 Msa0838470:CDS 40.0%
CTACGTGCATTGGAAATTCA+GGG + chr5_4:12857098-12857117 Msa0838470:CDS 40.0%
TACGTGCATTGGAAATTCAG+GGG + chr5_4:12857099-12857118 Msa0838470:CDS 40.0%
CAGCTGTATTGTCTGGAAAT+AGG + chr5_4:12857247-12857266 Msa0838470:CDS 40.0%
GTCTGGAAATAGGAACTTTG+AGG + chr5_4:12857257-12857276 Msa0838470:CDS 40.0%
!! TCTGCTATTTCTTCACTGGA+TGG - chr5_4:12857505-12857524 None:intergenic 40.0%
ATCTGGCAATCTTTATGCCT+GGG + chr5_4:12857713-12857732 Msa0838470:CDS 40.0%
!! ATAAGTTGATGTAGAGTCCC+AGG - chr5_4:12857733-12857752 None:intergenic 40.0%
GTAAGCATTCTTCACTCCAT+GGG - chr5_4:12857805-12857824 None:intergenic 40.0%
AGTAAGCATTCTTCACTCCA+TGG - chr5_4:12857806-12857825 None:intergenic 40.0%
GCTTACTGTTTGCTCAACTT+TGG + chr5_4:12857819-12857838 Msa0838470:CDS 40.0%
TAGGTCCAACTTCTCCATTT+AGG - chr5_4:12858028-12858047 None:intergenic 40.0%
GAAGTTATCAGTCTTCGATG+CGG + chr5_4:12858073-12858092 Msa0838470:CDS 40.0%
TAACATGCCTACATGTCACA+TGG - chr5_4:12858118-12858137 None:intergenic 40.0%
!! CATGTAGGCATGTTAGTCTT+TGG + chr5_4:12858123-12858142 Msa0838470:intron 40.0%
! AGGCTTTGGTATAGCTACTT+CGG - chr5_4:12858211-12858230 None:intergenic 40.0%
AATCCAGCATGATATCCGTA+GGG - chr5_4:12858332-12858351 None:intergenic 40.0%
AAATCCAGCATGATATCCGT+AGG - chr5_4:12858333-12858352 None:intergenic 40.0%
GTCAGAAATACAAGAGTGAG+GGG + chr5_4:12858473-12858492 Msa0838470:intron 40.0%
! GGGGCACGATACAATTATTT+TGG + chr5_4:12858492-12858511 Msa0838470:CDS 40.0%
CAAGGAATTACCAGTAGCAT+TGG - chr5_4:12858568-12858587 None:intergenic 40.0%
GAGGATTCACCGTAGTAATT+TGG + chr5_4:12858695-12858714 Msa0838470:CDS 40.0%
GATTCACCGTAGTAATTTGG+TGG + chr5_4:12858698-12858717 Msa0838470:CDS 40.0%
CCATTCCCACCAAATTACTA+CGG - chr5_4:12858707-12858726 None:intergenic 40.0%
! CGTAGTAATTTGGTGGGAAT+GGG + chr5_4:12858705-12858724 Msa0838470:CDS 40.0%
! TCCTTTGTGTTTCAAGTCTG+GGG + chr5_4:12858734-12858753 Msa0838470:CDS 40.0%
AATGGTGTAACGTTCATGAC+CGG - chr5_4:12858784-12858803 None:intergenic 40.0%
CGAATTTCATTCACACTGCT+TGG - chr5_4:12858813-12858832 None:intergenic 40.0%
AGTGTGAATGAAATTCGACC+TGG + chr5_4:12858816-12858835 Msa0838470:CDS 40.0%
TACCCTGAGATTTGATACAG+AGG + chr5_4:12858884-12858903 Msa0838470:CDS 40.0%
CTTGCTTACTTCAATCATGG+AGG + chr5_4:12859029-12859048 Msa0838470:CDS 40.0%
GAATTTCCTCCCACATTGAA+AGG - chr5_4:12859144-12859163 None:intergenic 40.0%
CGCGCGAATATGTTAATGCT+GGG + chr5_4:12852559-12852578 Msa0838470:intron 45.0%
ACGCATTTGAACCCCATTTG+AGG - chr5_4:12852991-12853010 None:intergenic 45.0%
!! AACATGCTTGTTGTTCCTCC+TGG + chr5_4:12853016-12853035 Msa0838470:CDS 45.0%
!! TGATGGACTATTCCTGATCC+AGG - chr5_4:12853037-12853056 None:intergenic 45.0%
TGGATCAGGAATAGTCCATC+AGG + chr5_4:12853036-12853055 Msa0838470:CDS 45.0%
AATTTGAACCCAACCACACC+AGG - chr5_4:12853730-12853749 None:intergenic 45.0%
! CTAAGAAAGCATGGGGTTGT+TGG + chr5_4:12853811-12853830 Msa0838470:CDS 45.0%
AGGCATGAGTGAACTACCTT+TGG + chr5_4:12853965-12853984 Msa0838470:CDS 45.0%
!! AGGAGACATGTTTGCTATGG+TGG - chr5_4:12854000-12854019 None:intergenic 45.0%
! CTCAGGAGACATGTTTGCTA+TGG - chr5_4:12854003-12854022 None:intergenic 45.0%
GCAAACATGTCTCCTGAGTA+TGG + chr5_4:12854005-12854024 Msa0838470:CDS 45.0%
TGCAAAGTGACATGATCCAC+GGG - chr5_4:12854050-12854069 None:intergenic 45.0%
TACAGTTTCATCACTCCTGC+CGG - chr5_4:12854087-12854106 None:intergenic 45.0%
AGCAAACTCTCAGTGAGATC+AGG - chr5_4:12854290-12854309 None:intergenic 45.0%
TGAGTACACTCTCTCCACTT+GGG - chr5_4:12854328-12854347 None:intergenic 45.0%
ATGAGTACACTCTCTCCACT+TGG - chr5_4:12854329-12854348 None:intergenic 45.0%
GATGTTGAACCATGTGTCTC+AGG + chr5_4:12854372-12854391 Msa0838470:CDS 45.0%
! CTTTTTGGACCTGAGACACA+TGG - chr5_4:12854384-12854403 None:intergenic 45.0%
CATGTGTCTCAGGTCCAAAA+AGG + chr5_4:12854382-12854401 Msa0838470:CDS 45.0%
GCCTGCCTCAACAATAAAGT+TGG + chr5_4:12854909-12854928 Msa0838470:CDS 45.0%
CCCAACTTTATTGTTGAGGC+AGG - chr5_4:12854913-12854932 None:intergenic 45.0%
! CTAAAGGCATGACTGAGAGA+GGG - chr5_4:12855526-12855545 None:intergenic 45.0%
! ACTAAAGGCATGACTGAGAG+AGG - chr5_4:12855527-12855546 None:intergenic 45.0%
GCCTTTAGTGCATGATAGGA+TGG + chr5_4:12855538-12855557 Msa0838470:intron 45.0%
GTTAACACCAACCTTGAGTG+AGG + chr5_4:12855758-12855777 Msa0838470:intron 45.0%
!! GCTTTGTTTGCGAGTTTGGA+GGG + chr5_4:12855810-12855829 Msa0838470:intron 45.0%
! CTTTGTTTGCGAGTTTGGAG+GGG + chr5_4:12855811-12855830 Msa0838470:intron 45.0%
!! AAGGGAGGGCTTTGGAAAAA+AGG + chr5_4:12855834-12855853 Msa0838470:intron 45.0%
!! GAGGGCTTTGGAAAAAAGGA+AGG + chr5_4:12855838-12855857 Msa0838470:intron 45.0%
GGAAAAAAGGAAGGAGCAAG+TGG + chr5_4:12855847-12855866 Msa0838470:intron 45.0%
! AAGACTTTAAGAGGGGGTGA+AGG + chr5_4:12855879-12855898 Msa0838470:intron 45.0%
! GTATTGGAGGAGGATTTTGG+AGG + chr5_4:12855966-12855985 Msa0838470:intron 45.0%
GTGGGAAATATGGGGGAAAA+TGG - chr5_4:12856121-12856140 None:intergenic 45.0%
ATTTGGGGGGTGGGAAATAT+GGG - chr5_4:12856130-12856149 None:intergenic 45.0%
! CTTTGTTTGGGAGTTTGGAG+GGG - chr5_4:12856157-12856176 None:intergenic 45.0%
!! GCTTTGTTTGGGAGTTTGGA+GGG - chr5_4:12856158-12856177 None:intergenic 45.0%
GCATTCTTGAGGTGATTAGG+GGG - chr5_4:12856195-12856214 None:intergenic 45.0%
GGCATTCTTGAGGTGATTAG+GGG - chr5_4:12856196-12856215 None:intergenic 45.0%
CGGCATTCTTGAGGTGATTA+GGG - chr5_4:12856197-12856216 None:intergenic 45.0%
ACGGCATTCTTGAGGTGATT+AGG - chr5_4:12856198-12856217 None:intergenic 45.0%
!! CCGTTCACTTTTGACTGCAT+TGG + chr5_4:12856214-12856233 Msa0838470:intron 45.0%
ATGTGCTCATTGCATCTTCC+AGG + chr5_4:12856265-12856284 Msa0838470:intron 45.0%
CACCAGCAAAACTTAAGCAC+GGG + chr5_4:12856404-12856423 Msa0838470:CDS 45.0%
ACCAGCAAAACTTAAGCACG+GGG + chr5_4:12856405-12856424 Msa0838470:CDS 45.0%
! AGCATGTGATTTGGGATTGC+AGG + chr5_4:12856510-12856529 Msa0838470:CDS 45.0%
! TGGTGGCGTTCACATTTATG+TGG + chr5_4:12856982-12857001 Msa0838470:intron 45.0%
AGCCACTGCAAAAGCAATAC+AGG - chr5_4:12857027-12857046 None:intergenic 45.0%
TATGGATGCACTACGTGCAT+TGG + chr5_4:12857088-12857107 Msa0838470:CDS 45.0%
! CCCTCGTTAATGGATGAACT+CGG - chr5_4:12857284-12857303 None:intergenic 45.0%
CCGAGTTCATCCATTAACGA+GGG + chr5_4:12857281-12857300 Msa0838470:CDS 45.0%
AGGTAGTTAGCCCTCGTTAA+TGG - chr5_4:12857294-12857313 None:intergenic 45.0%
TGTGCTGCCCGATATGTTTA+GGG + chr5_4:12857635-12857654 Msa0838470:CDS 45.0%
TTACCAAAGGCAACCCTATG+TGG + chr5_4:12857673-12857692 Msa0838470:CDS 45.0%
ATTCCACATAGGGTTGCCTT+TGG - chr5_4:12857679-12857698 None:intergenic 45.0%
CAGGCATAAAGATTGCCAGA+TGG - chr5_4:12857714-12857733 None:intergenic 45.0%
CATCTGGCAATCTTTATGCC+TGG + chr5_4:12857712-12857731 Msa0838470:CDS 45.0%
CCAGATACCTTACAGAACGT+GGG + chr5_4:12857904-12857923 Msa0838470:CDS 45.0%
CAGATACCTTACAGAACGTG+GGG + chr5_4:12857905-12857924 Msa0838470:CDS 45.0%
AGACGAGACTTCAACTCCTA+TGG + chr5_4:12857933-12857952 Msa0838470:CDS 45.0%
! AATGATGAGGTGATGGCAAG+AGG + chr5_4:12857969-12857988 Msa0838470:CDS 45.0%
ACTGATAACTTCTCCCCAGA+AGG - chr5_4:12858065-12858084 None:intergenic 45.0%
!!! ATTTTGGCTGGTGCAGAGTA+TGG + chr5_4:12858508-12858527 Msa0838470:CDS 45.0%
!! TTTTGGCTGGTGCAGAGTAT+GGG + chr5_4:12858509-12858528 Msa0838470:CDS 45.0%
GAGTGGAAGTTCTCGTGATT+GGG + chr5_4:12858531-12858550 Msa0838470:CDS 45.0%
! CCGTAGTAATTTGGTGGGAA+TGG + chr5_4:12858704-12858723 Msa0838470:CDS 45.0%
TCCCCAGACTTGAAACACAA+AGG - chr5_4:12858738-12858757 None:intergenic 45.0%
! ACCGGTCAATCCAAGAGTAT+CGG - chr5_4:12858766-12858785 None:intergenic 45.0%
CACACTGCTTGGAAGATCAA+TGG - chr5_4:12858802-12858821 None:intergenic 45.0%
TCGACCTGGTCAAGATATCA+CGG + chr5_4:12858830-12858849 Msa0838470:CDS 45.0%
AGCCAAGGTCCTTTCAATGT+GGG + chr5_4:12859132-12859151 Msa0838470:three_prime_UTR 45.0%
AAACTAAGGAACTCAGGTGG+AGG + chr5_4:12859189-12859208 Msa0838470:three_prime_UTR 45.0%
AACTAAGGAACTCAGGTGGA+GGG + chr5_4:12859190-12859209 Msa0838470:three_prime_UTR 45.0%
!! TTGTACTGAGGAGCGTTGAA+AGG + chr5_4:12859375-12859394 Msa0838470:three_prime_UTR 45.0%
ACGTAGCTACAAGAAAGCTC+AGG - chr5_4:12859423-12859442 None:intergenic 45.0%
CATGACACATCTGCTATGCT+AGG - chr5_4:12859500-12859519 None:intergenic 45.0%
!!! ACAATATAATTTTATTTATA+TGG - chr5_4:12857562-12857581 None:intergenic 5.0%
! ACAGAGAGCGTGAAGAACGA+AGG - chr5_4:12851958-12851977 None:intergenic 50.0%
TTGACGACGTTGGAAAAGCC+AGG + chr5_4:12852194-12852213 Msa0838470:CDS 50.0%
CGACACTGAGACGTTAACAC+CGG - chr5_4:12852303-12852322 None:intergenic 50.0%
TAACGTCTCAGTGTCGTGTC+TGG + chr5_4:12852307-12852326 Msa0838470:intron 50.0%
GTCTGGTGTCTGTGTCTGAA+TGG + chr5_4:12852324-12852343 Msa0838470:intron 50.0%
GGTGTCTGTGTCTGAATGGT+TGG + chr5_4:12852328-12852347 Msa0838470:intron 50.0%
GGTGGAGATTCCATTCAAGC+CGG + chr5_4:12852511-12852530 Msa0838470:CDS 50.0%
AGATTCCATTCAAGCCGGCT+AGG + chr5_4:12852516-12852535 Msa0838470:CDS 50.0%
GATTCCATTCAAGCCGGCTA+GGG + chr5_4:12852517-12852536 Msa0838470:CDS 50.0%
GCGCGCGAATATGTTAATGC+TGG + chr5_4:12852558-12852577 Msa0838470:intron 50.0%
!! TGGTTACTTTCAGGTACCGG+TGG + chr5_4:12852859-12852878 Msa0838470:intron 50.0%
!! CTTGTTGTTCCTCCTGGATC+AGG + chr5_4:12853022-12853041 Msa0838470:CDS 50.0%
TGGACTATTCCTGATCCAGG+AGG - chr5_4:12853034-12853053 None:intergenic 50.0%
! TGTGCGCGCGTGTGTTATTA+TGG + chr5_4:12853099-12853118 Msa0838470:intron 50.0%
CTCTATCCTGACAGCGTTGT+CGG + chr5_4:12853284-12853303 Msa0838470:CDS 50.0%
! ATTGATGGCTTGGGTGTTGC+TGG + chr5_4:12853329-12853348 Msa0838470:CDS 50.0%
!! TTGATGGCTTGGGTGTTGCT+GGG + chr5_4:12853330-12853349 Msa0838470:CDS 50.0%
! CTGACCAAGCATTGCAGCTT+CGG - chr5_4:12853378-12853397 None:intergenic 50.0%
TCATGCCTTCCCCTGCATAA+AGG - chr5_4:12853953-12853972 None:intergenic 50.0%
TCCTGAGTATGGTGCAACCA+TGG + chr5_4:12854016-12854035 Msa0838470:CDS 50.0%
CCTGAGTATGGTGCAACCAT+GGG + chr5_4:12854017-12854036 Msa0838470:CDS 50.0%
AACCATGGGATTCTTTCCCG+TGG + chr5_4:12854031-12854050 Msa0838470:CDS 50.0%
ATCCACGGGAAAGAATCCCA+TGG - chr5_4:12854036-12854055 None:intergenic 50.0%
GAGTACACTCTCTCCACTTG+GGG - chr5_4:12854327-12854346 None:intergenic 50.0%
AACAAGCCAGCAAGGGTCAA+GGG - chr5_4:12854607-12854626 None:intergenic 50.0%
AAACAAGCCAGCAAGGGTCA+AGG - chr5_4:12854608-12854627 None:intergenic 50.0%
TCGACAACGTTGTGGAGTTG+AGG + chr5_4:12854744-12854763 Msa0838470:intron 50.0%
CGACAACGTTGTGGAGTTGA+GGG + chr5_4:12854745-12854764 Msa0838470:intron 50.0%
TGTGGAGTTGAGGGTTTGTG+TGG + chr5_4:12854754-12854773 Msa0838470:intron 50.0%
CTCTCACTTCGCATTGTTGG+TGG - chr5_4:12855655-12855674 None:intergenic 50.0%
! AATAGGGCACTCCTCACTCA+AGG - chr5_4:12855772-12855791 None:intergenic 50.0%
!! GGCTTTGTTTGCGAGTTTGG+AGG + chr5_4:12855809-12855828 Msa0838470:intron 50.0%
TTTGCGAGTTTGGAGGGGAA+GGG + chr5_4:12855816-12855835 Msa0838470:intron 50.0%
TTAAGAGGGGGTGAAGGCTT+TGG + chr5_4:12855885-12855904 Msa0838470:intron 50.0%
TTTGGGGGGTGGGAAATATG+GGG - chr5_4:12856129-12856148 None:intergenic 50.0%
GATTTGGGGGGTGGGAAATA+TGG - chr5_4:12856131-12856150 None:intergenic 50.0%
AGTTTGGAGGGGAGGGATTT+GGG - chr5_4:12856146-12856165 None:intergenic 50.0%
!! GGCTTTGTTTGGGAGTTTGG+AGG - chr5_4:12856159-12856178 None:intergenic 50.0%
! TCCCCGTGCTTAAGTTTTGC+TGG - chr5_4:12856409-12856428 None:intergenic 50.0%
GCAGCTCCAAGCATTACACT+AGG - chr5_4:12856475-12856494 None:intergenic 50.0%
TGTAATGCTTGGAGCTGCCT+TGG + chr5_4:12856477-12856496 Msa0838470:CDS 50.0%
ACAAGTCTTGCTCCAGGTTC+TGG + chr5_4:12856895-12856914 Msa0838470:CDS 50.0%
GTAGCTGCAGCTGTATTGTC+TGG + chr5_4:12857240-12857259 Msa0838470:CDS 50.0%
GCCGAGTTCATCCATTAACG+AGG + chr5_4:12857280-12857299 Msa0838470:CDS 50.0%
! TTTACGTACTGTGCCGGCAA+GGG - chr5_4:12857346-12857365 None:intergenic 50.0%
! ATTTACGTACTGTGCCGGCA+AGG - chr5_4:12857347-12857366 None:intergenic 50.0%
ACTTTGACACCGAGCCCATT+GGG + chr5_4:12857437-12857456 Msa0838470:CDS 50.0%
CCATCCTTCGCAATCCCAAT+GGG - chr5_4:12857454-12857473 None:intergenic 50.0%
TCCATCCTTCGCAATCCCAA+TGG - chr5_4:12857455-12857474 None:intergenic 50.0%
GTGTGCTGCCCGATATGTTT+AGG + chr5_4:12857634-12857653 Msa0838470:CDS 50.0%
TCCAGCTGGCAGCATACATA+AGG + chr5_4:12857869-12857888 Msa0838470:CDS 50.0%
TCCTTATGTATGCTGCCAGC+TGG - chr5_4:12857873-12857892 None:intergenic 50.0%
! TCTGTAAGGTATCTGGCTGC+AGG - chr5_4:12857900-12857919 None:intergenic 50.0%
GCCAGATACCTTACAGAACG+TGG + chr5_4:12857903-12857922 Msa0838470:CDS 50.0%
! CCCACGTTCTGTAAGGTATC+TGG - chr5_4:12857907-12857926 None:intergenic 50.0%
TATCGACCCCACGTTCTGTA+AGG - chr5_4:12857914-12857933 None:intergenic 50.0%
CCATCACCTCATCATTGCCA+CGG - chr5_4:12857965-12857984 None:intergenic 50.0%
CATCATGGGAGGTTCCAAAG+TGG + chr5_4:12858275-12858294 Msa0838470:intron 50.0%
GATTTACACGCGGACCACTT+TGG - chr5_4:12858292-12858311 None:intergenic 50.0%
GGAGTGGAAGTTCTCGTGAT+TGG + chr5_4:12858530-12858549 Msa0838470:CDS 50.0%
TTCTCGTGATTGGGCTGCAA+AGG + chr5_4:12858540-12858559 Msa0838470:CDS 50.0%
TCTCGTGATTGGGCTGCAAA+GGG + chr5_4:12858541-12858560 Msa0838470:CDS 50.0%
TGCAAAGGGACCAATGCTAC+TGG + chr5_4:12858555-12858574 Msa0838470:CDS 50.0%
GTCAGAGCAGAACAGCATCA+AGG - chr5_4:12858586-12858605 None:intergenic 50.0%
TATGACAGCTTTCACGCCCT+AGG - chr5_4:12858661-12858680 None:intergenic 50.0%
GCCGATACTCTTGGATTGAC+CGG + chr5_4:12858762-12858781 Msa0838470:CDS 50.0%
ACCTGGTCAAGATATCACGG+TGG + chr5_4:12858833-12858852 Msa0838470:CDS 50.0%
ACCACCGTGATATCTTGACC+AGG - chr5_4:12858837-12858856 None:intergenic 50.0%
ATCACGGTGGTGACAGACAA+TGG + chr5_4:12858846-12858865 Msa0838470:CDS 50.0%
TCACGGTGGTGACAGACAAT+GGG + chr5_4:12858847-12858866 Msa0838470:CDS 50.0%
AATGTGGAATGGGTCAGCCA+AGG + chr5_4:12859117-12859136 Msa0838470:three_prime_UTR 50.0%
CAGCCAAGGTCCTTTCAATG+TGG + chr5_4:12859131-12859150 Msa0838470:three_prime_UTR 50.0%
CTCCCACATTGAAAGGACCT+TGG - chr5_4:12859137-12859156 None:intergenic 50.0%
CAAGGTCCTTTCAATGTGGG+AGG + chr5_4:12859135-12859154 Msa0838470:three_prime_UTR 50.0%
ACGACGTTGGAAAAGCCAGG+TGG + chr5_4:12852197-12852216 Msa0838470:CDS 55.0%
ACGTTGGAAAAGCCAGGTGG+TGG + chr5_4:12852200-12852219 Msa0838470:CDS 55.0%
! TTGGAAAAGCCAGGTGGTGG+AGG + chr5_4:12852203-12852222 Msa0838470:CDS 55.0%
CCAAATTCACCTCCACCACC+TGG - chr5_4:12852215-12852234 None:intergenic 55.0%
!! CCAGGTGGTGGAGGTGAATT+TGG + chr5_4:12852212-12852231 Msa0838470:CDS 55.0%
!! ACCTGAAGAAGCACCCTAGC+CGG - chr5_4:12852533-12852552 None:intergenic 55.0%
! AGGGTGCTTCTTCAGGTGAG+TGG + chr5_4:12852536-12852555 Msa0838470:intron 55.0%
CAGGCAAGGTCAACAACAGC+AGG - chr5_4:12852694-12852713 None:intergenic 55.0%
GTTCATCGCGTCTCGCATAC+AGG - chr5_4:12852713-12852732 None:intergenic 55.0%
GTATGCGAGACGCGATGAAC+AGG + chr5_4:12852713-12852732 Msa0838470:CDS 55.0%
GAAGCCGAAGCTGCAATGCT+TGG + chr5_4:12853371-12853390 Msa0838470:intron 55.0%
CGAAGCTGCAATGCTTGGTC+AGG + chr5_4:12853376-12853395 Msa0838470:intron 55.0%
TCCTTTGCAGCCCATGAGCA+TGG + chr5_4:12853699-12853718 Msa0838470:intron 55.0%
! ACCATGCTCATGGGCTGCAA+AGG - chr5_4:12853703-12853722 None:intergenic 55.0%
CCAGGTAGGACCATGCTCAT+GGG - chr5_4:12853712-12853731 None:intergenic 55.0%
ACCAGGTAGGACCATGCTCA+TGG - chr5_4:12853713-12853732 None:intergenic 55.0%
ATGGTCCTACCTGGTGTGGT+TGG + chr5_4:12853718-12853737 Msa0838470:intron 55.0%
TGGTCCTACCTGGTGTGGTT+GGG + chr5_4:12853719-12853738 Msa0838470:intron 55.0%
TGAACCCAACCACACCAGGT+AGG - chr5_4:12853726-12853745 None:intergenic 55.0%
!! TGGTGTCACAGCTACCGACT+TGG + chr5_4:12853768-12853787 Msa0838470:CDS 55.0%
ATGGTGGCACGATCAGCCAA+AGG - chr5_4:12853984-12854003 None:intergenic 55.0%
CCCATGGTTGCACCATACTC+AGG - chr5_4:12854020-12854039 None:intergenic 55.0%
TGTTGCATTGCAGCCCCAAG+TGG + chr5_4:12854311-12854330 Msa0838470:intron 55.0%
TTCCTACCCTTGACCCTTGC+TGG + chr5_4:12854598-12854617 Msa0838470:intron 55.0%
GTTTGCGAGTTTGGAGGGGA+AGG + chr5_4:12855815-12855834 Msa0838470:intron 55.0%
TTGGGGGGTGGGAAATATGG+GGG - chr5_4:12856128-12856147 None:intergenic 55.0%
TTTGGAGGGGAGGGATTTGG+GGG - chr5_4:12856144-12856163 None:intergenic 55.0%
GTTTGGAGGGGAGGGATTTG+GGG - chr5_4:12856145-12856164 None:intergenic 55.0%
GAGTTTGGAGGGGAGGGATT+TGG - chr5_4:12856147-12856166 None:intergenic 55.0%
GTTTGGGAGTTTGGAGGGGA+GGG - chr5_4:12856153-12856172 None:intergenic 55.0%
TGTTTGGGAGTTTGGAGGGG+AGG - chr5_4:12856154-12856173 None:intergenic 55.0%
CAACGAGAGGAGGAGAAGCT+AGG - chr5_4:12857314-12857333 None:intergenic 55.0%
GCATAGGCAACAACGAGAGG+AGG - chr5_4:12857324-12857343 None:intergenic 55.0%
AGGGCATAGGCAACAACGAG+AGG - chr5_4:12857327-12857346 None:intergenic 55.0%
GTTGTTGCCTATGCCCTTGC+CGG + chr5_4:12857330-12857349 Msa0838470:CDS 55.0%
GACTTTGACACCGAGCCCAT+TGG + chr5_4:12857436-12857455 Msa0838470:CDS 55.0%
! CTTCGCAATCCCAATGGGCT+CGG - chr5_4:12857449-12857468 None:intergenic 55.0%
CCCATTGGGATTGCGAAGGA+TGG + chr5_4:12857451-12857470 Msa0838470:CDS 55.0%
TCTTCACTCCATGGGAGCCT+GGG - chr5_4:12857797-12857816 None:intergenic 55.0%
TTCTTCACTCCATGGGAGCC+TGG - chr5_4:12857798-12857817 None:intergenic 55.0%
AGCTGGAGAGATGTGGTCAG+TGG - chr5_4:12857856-12857875 None:intergenic 55.0%
ACTGACCACATCTCTCCAGC+TGG + chr5_4:12857855-12857874 Msa0838470:CDS 55.0%
AACTCCTATGGAAGTCGCCG+TGG + chr5_4:12857945-12857964 Msa0838470:CDS 55.0%
ATTGCCACGGCGACTTCCAT+AGG - chr5_4:12857952-12857971 None:intergenic 55.0%
AAGTCGCCGTGGCAATGATG+AGG + chr5_4:12857956-12857975 Msa0838470:CDS 55.0%
CCGTGGCAATGATGAGGTGA+TGG + chr5_4:12857962-12857981 Msa0838470:CDS 55.0%
CGACCCTACGGATATCATGC+TGG + chr5_4:12858326-12858345 Msa0838470:intron 55.0%
GGGGAAGATGCCGATACTCT+TGG + chr5_4:12858753-12858772 Msa0838470:CDS 55.0%
TGTGTCATGTTGCCCATCCC+AGG + chr5_4:12859511-12859530 Msa0838470:three_prime_UTR 55.0%
!! AGCACCCTAGCCGGCTTGAA+TGG - chr5_4:12852524-12852543 None:intergenic 60.0%
GTCAACAACAGCAGGCACCC+CGG - chr5_4:12852686-12852705 None:intergenic 60.0%
TCGCGTCTCGCATACAGGCA+AGG - chr5_4:12852708-12852727 None:intergenic 60.0%
CGAGACGCGATGAACAGGCT+TGG + chr5_4:12852718-12852737 Msa0838470:CDS 60.0%
GACGCGATGAACAGGCTTGG+TGG + chr5_4:12852721-12852740 Msa0838470:CDS 60.0%
TCGGTTCCGACAACGCTGTC+AGG - chr5_4:12853293-12853312 None:intergenic 60.0%
!! ATGGCTTGGGTGTTGCTGGG+TGG + chr5_4:12853333-12853352 Msa0838470:CDS 60.0%
!! TGGCTTGGGTGTTGCTGGGT+GGG + chr5_4:12853334-12853353 Msa0838470:CDS 60.0%
CCCATGAGCATGGTCCTACC+TGG + chr5_4:12853709-12853728 Msa0838470:intron 60.0%
GAGCATGGTCCTACCTGGTG+TGG + chr5_4:12853714-12853733 Msa0838470:intron 60.0%
AGCCAGCAAGGGTCAAGGGT+AGG - chr5_4:12854603-12854622 None:intergenic 60.0%
GGTGGTGTAAAAGCCCCCGA+GGG - chr5_4:12855637-12855656 None:intergenic 60.0%
! TGGTGGTGTAAAAGCCCCCG+AGG - chr5_4:12855638-12855657 None:intergenic 60.0%
GGGCACTCCTCACTCAAGGT+TGG - chr5_4:12855768-12855787 None:intergenic 60.0%
CGAGTTTGGAGGGGAAGGGA+GGG + chr5_4:12855820-12855839 Msa0838470:intron 60.0%
! AGAGGGGGTGAAGGCTTTGG+AGG + chr5_4:12855888-12855907 Msa0838470:intron 60.0%
!! GAGGGGGTGAAGGCTTTGGA+GGG + chr5_4:12855889-12855908 Msa0838470:intron 60.0%
!! AGGGGGTGAAGGCTTTGGAG+GGG + chr5_4:12855890-12855909 Msa0838470:intron 60.0%
TTGGAGGGGAGGGATTTGGG+GGG - chr5_4:12856143-12856162 None:intergenic 60.0%
! TACTGTGCCGGCAAGGGCAT+AGG - chr5_4:12857340-12857359 None:intergenic 60.0%
CGAGCCCATTGGGATTGCGA+AGG + chr5_4:12857447-12857466 Msa0838470:CDS 60.0%
TTCACTCCATGGGAGCCTGG+GGG - chr5_4:12857795-12857814 None:intergenic 60.0%
CTTCACTCCATGGGAGCCTG+GGG - chr5_4:12857796-12857815 None:intergenic 60.0%
TGCTGCCAGCTGGAGAGATG+TGG - chr5_4:12857863-12857882 None:intergenic 60.0%
GCTGGTGCAGAGTATGGGAG+TGG + chr5_4:12858514-12858533 Msa0838470:CDS 60.0%
! GCCGGCTAGGGTGCTTCTTC+AGG + chr5_4:12852529-12852548 Msa0838470:CDS 65.0%
!! GGCTTGGGTGTTGCTGGGTG+GGG + chr5_4:12853335-12853354 Msa0838470:CDS 65.0%
!! GGTGTTGCTGGGTGGGGAGT+TGG + chr5_4:12853341-12853360 Msa0838470:CDS 65.0%
GTTGCTGGGTGGGGAGTTGG+TGG + chr5_4:12853344-12853363 Msa0838470:CDS 65.0%
GCGAGTTTGGAGGGGAAGGG+AGG + chr5_4:12855819-12855838 Msa0838470:intron 65.0%
TGGAGGGGAAGGGAGGGCTT+TGG + chr5_4:12855826-12855845 Msa0838470:intron 65.0%
AGGGGAGGGATTTGGGGGGT+GGG - chr5_4:12856139-12856158 None:intergenic 65.0%
GGCATGAGCATGTCTCCCCC+AGG + chr5_4:12857777-12857796 Msa0838470:CDS 65.0%
ATGTCTCCCCCAGGCTCCCA+TGG + chr5_4:12857786-12857805 Msa0838470:CDS 65.0%
GGAACTCAGGTGGAGGGTCG+TGG + chr5_4:12859196-12859215 Msa0838470:three_prime_UTR 65.0%
GAGGGGAGGGATTTGGGGGG+TGG - chr5_4:12856140-12856159 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 12851859 12859592 12851859 ID=Msa0838470;Name=Msa0838470
chr5_4 mRNA 12851859 12859592 12851859 ID=Msa0838470-mRNA-1;Parent=Msa0838470;Name=Msa0838470-mRNA-1;_AED=0.10;_eAED=0.10;_QI=129|0.95|0.90|1|0.90|0.86|22|495|875
chr5_4 exon 12851859 12851870 12851859 ID=Msa0838470-mRNA-1:exon:5669;Parent=Msa0838470-mRNA-1
chr5_4 exon 12851893 12851976 12851893 ID=Msa0838470-mRNA-1:exon:5670;Parent=Msa0838470-mRNA-1
chr5_4 exon 12851997 12852033 12851997 ID=Msa0838470-mRNA-1:exon:5671;Parent=Msa0838470-mRNA-1
chr5_4 exon 12852168 12852275 12852168 ID=Msa0838470-mRNA-1:exon:5672;Parent=Msa0838470-mRNA-1
chr5_4 exon 12852390 12852550 12852390 ID=Msa0838470-mRNA-1:exon:5673;Parent=Msa0838470-mRNA-1
chr5_4 exon 12852676 12852768 12852676 ID=Msa0838470-mRNA-1:exon:5674;Parent=Msa0838470-mRNA-1
chr5_4 exon 12852872 12853057 12852872 ID=Msa0838470-mRNA-1:exon:5675;Parent=Msa0838470-mRNA-1
chr5_4 exon 12853236 12853365 12853236 ID=Msa0838470-mRNA-1:exon:5676;Parent=Msa0838470-mRNA-1
chr5_4 exon 12853755 12853853 12853755 ID=Msa0838470-mRNA-1:exon:5677;Parent=Msa0838470-mRNA-1
chr5_4 exon 12853961 12854103 12853961 ID=Msa0838470-mRNA-1:exon:5678;Parent=Msa0838470-mRNA-1
chr5_4 exon 12854172 12854228 12854172 ID=Msa0838470-mRNA-1:exon:5679;Parent=Msa0838470-mRNA-1
chr5_4 exon 12854324 12854403 12854324 ID=Msa0838470-mRNA-1:exon:5680;Parent=Msa0838470-mRNA-1
chr5_4 exon 12854863 12854938 12854863 ID=Msa0838470-mRNA-1:exon:5681;Parent=Msa0838470-mRNA-1
chr5_4 exon 12856346 12856531 12856346 ID=Msa0838470-mRNA-1:exon:5682;Parent=Msa0838470-mRNA-1
chr5_4 exon 12856877 12856944 12856877 ID=Msa0838470-mRNA-1:exon:5683;Parent=Msa0838470-mRNA-1
chr5_4 exon 12857042 12857160 12857042 ID=Msa0838470-mRNA-1:exon:5684;Parent=Msa0838470-mRNA-1
chr5_4 exon 12857235 12857356 12857235 ID=Msa0838470-mRNA-1:exon:5685;Parent=Msa0838470-mRNA-1
chr5_4 exon 12857427 12857525 12857427 ID=Msa0838470-mRNA-1:exon:5686;Parent=Msa0838470-mRNA-1
chr5_4 exon 12857621 12858100 12857621 ID=Msa0838470-mRNA-1:exon:5687;Parent=Msa0838470-mRNA-1
chr5_4 exon 12858478 12858576 12858478 ID=Msa0838470-mRNA-1:exon:5688;Parent=Msa0838470-mRNA-1
chr5_4 exon 12858663 12858905 12858663 ID=Msa0838470-mRNA-1:exon:5689;Parent=Msa0838470-mRNA-1
chr5_4 exon 12859023 12859592 12859023 ID=Msa0838470-mRNA-1:exon:5690;Parent=Msa0838470-mRNA-1
chr5_4 five_prime_UTR 12851859 12851870 12851859 ID=Msa0838470-mRNA-1:five_prime_utr;Parent=Msa0838470-mRNA-1
chr5_4 five_prime_UTR 12851893 12851976 12851893 ID=Msa0838470-mRNA-1:five_prime_utr;Parent=Msa0838470-mRNA-1
chr5_4 five_prime_UTR 12851997 12852029 12851997 ID=Msa0838470-mRNA-1:five_prime_utr;Parent=Msa0838470-mRNA-1
chr5_4 CDS 12852030 12852033 12852030 ID=Msa0838470-mRNA-1:cds;Parent=Msa0838470-mRNA-1
chr5_4 CDS 12852168 12852275 12852168 ID=Msa0838470-mRNA-1:cds;Parent=Msa0838470-mRNA-1
chr5_4 CDS 12852390 12852550 12852390 ID=Msa0838470-mRNA-1:cds;Parent=Msa0838470-mRNA-1
chr5_4 CDS 12852676 12852768 12852676 ID=Msa0838470-mRNA-1:cds;Parent=Msa0838470-mRNA-1
chr5_4 CDS 12852872 12853057 12852872 ID=Msa0838470-mRNA-1:cds;Parent=Msa0838470-mRNA-1
chr5_4 CDS 12853236 12853365 12853236 ID=Msa0838470-mRNA-1:cds;Parent=Msa0838470-mRNA-1
chr5_4 CDS 12853755 12853853 12853755 ID=Msa0838470-mRNA-1:cds;Parent=Msa0838470-mRNA-1
chr5_4 CDS 12853961 12854103 12853961 ID=Msa0838470-mRNA-1:cds;Parent=Msa0838470-mRNA-1
chr5_4 CDS 12854172 12854228 12854172 ID=Msa0838470-mRNA-1:cds;Parent=Msa0838470-mRNA-1
chr5_4 CDS 12854324 12854403 12854324 ID=Msa0838470-mRNA-1:cds;Parent=Msa0838470-mRNA-1
chr5_4 CDS 12854863 12854938 12854863 ID=Msa0838470-mRNA-1:cds;Parent=Msa0838470-mRNA-1
chr5_4 CDS 12856346 12856531 12856346 ID=Msa0838470-mRNA-1:cds;Parent=Msa0838470-mRNA-1
chr5_4 CDS 12856877 12856944 12856877 ID=Msa0838470-mRNA-1:cds;Parent=Msa0838470-mRNA-1
chr5_4 CDS 12857042 12857160 12857042 ID=Msa0838470-mRNA-1:cds;Parent=Msa0838470-mRNA-1
chr5_4 CDS 12857235 12857356 12857235 ID=Msa0838470-mRNA-1:cds;Parent=Msa0838470-mRNA-1
chr5_4 CDS 12857427 12857525 12857427 ID=Msa0838470-mRNA-1:cds;Parent=Msa0838470-mRNA-1
chr5_4 CDS 12857621 12858100 12857621 ID=Msa0838470-mRNA-1:cds;Parent=Msa0838470-mRNA-1
chr5_4 CDS 12858478 12858576 12858478 ID=Msa0838470-mRNA-1:cds;Parent=Msa0838470-mRNA-1
chr5_4 CDS 12858663 12858905 12858663 ID=Msa0838470-mRNA-1:cds;Parent=Msa0838470-mRNA-1
chr5_4 CDS 12859023 12859097 12859023 ID=Msa0838470-mRNA-1:cds;Parent=Msa0838470-mRNA-1
chr5_4 three_prime_UTR 12859098 12859592 12859098 ID=Msa0838470-mRNA-1:three_prime_utr;Parent=Msa0838470-mRNA-1
Gene Sequence

>Msa0838470

ATGGCAACTCAAAATCCATTCAACAACATATTGACGACGTTGGAAAAGCCAGGTGGTGGAGGTGAATTTGGAAAATACTTTAGTTTGCAAGCTCTCAACGATTCTAGAATCGATGCACTTCCTTACTCAATAAGGATACTTTTGGAATCTGCAATTCGTAACTGTGATGAGTTTCAAGTTAAGAGTGATGATGTTGAAAAGATTATTGATTGGAAGAATACTTCTCCTAAACAGGTGGAGATTCCATTCAAGCCGGCTAGGGTGCTTCTTCAGGATTTTACCGGGGTGCCTGCTGTTGTTGACCTTGCCTGTATGCGAGACGCGATGAACAGGCTTGGTGGTGATTCGAATAAAATTAACCCATTGGTACCGGTGGATCTTGTCATTGATCACTCTGTTCAGGTTGATGTAGCAAGATCAGAAAATGCTGTTCAGGCAAATATGGAACTTGAATTCCAGAGGAACAAGGAAAGATTTGGTTTCCTCAAATGGGGTTCAAATGCGTTCAACAACATGCTTGTTGTTCCTCCTGGATCAGGAATAGTCCATCAGGTCAATTTAGAATACCTTGGTAGAGTTGTGTTCAACACAAATGGTGTGCTCTATCCTGACAGCGTTGTCGGAACCGATTCACACACAACTATGATTGATGGCTTGGGTGTTGCTGGGTGGGGAGTTGGTGGCAAACTACGAAGTGGTGTCACAGCTACCGACTTGGTCTTGACTGTTACTCAAATGCTAAGAAAGCATGGGGTTGTTGGCAAGTTTGTAGAGTTTTATGGGGAAGGCATGAGTGAACTACCTTTGGCTGATCGTGCCACCATAGCAAACATGTCTCCTGAGTATGGTGCAACCATGGGATTCTTTCCCGTGGATCATGTCACTTTGCAATATTTGAAACTGACCGGCAGGAGTGATGAAACTGTTTCTATGATAGAATCCTATTTACGAGCTAATAAGATGTTTGTGGACTACAATGAGCCCCAAGTGGAGAGAGTGTACTCATCCTATTTGGAGCTCAATCTTGAAGATGTTGAACCATGTGTCTCAGGTCCAAAAAGGCCTCATGACCGTGTTACTTTGAAAGAAATGAAAGCAGATTGGCATGCCTGCCTCAACAATAAAGTTGGGTTTAAGGGCTTTGCTGTGCCAAAAGAATCTCAGACAAAGTTTGCAGAGTTCAAATTTCATGAAACACCAGCAAAACTTAAGCACGGGGATGTTGTTATAGCTGCTATCACCAGTTGTACAAATACCTCAAATCCTAGTGTAATGCTTGGAGCTGCCTTGGTTGCAAAGAAAGCATGTGATTTGGGATTGCAGGTGAAGCCATGGATCAAAACAAGTCTTGCTCCAGGTTCTGGTGTAGTTACTAAGTATTTGCAGAAGAGTGGCTTGCAACCGTATTTGAATCAGCTAGGGTTTAATATAGTTGGGTATGGATGCACTACGTGCATTGGAAATTCAGGGGATATTAATGAAGCCGTTGCATCTGCAATTACTGAAAATGATATAGTAGCTGCAGCTGTATTGTCTGGAAATAGGAACTTTGAGGGCCGAGTTCATCCATTAACGAGGGCTAACTACCTAGCTTCTCCTCCTCTCGTTGTTGCCTATGCCCTTGCCGGCACAGTCAACATTGACTTTGACACCGAGCCCATTGGGATTGCGAAGGATGGAAAACAGATTTTCTTCAGAGATATTTGGCCATCCAGTGAAGAAATAGCAGATGTTGTACAATCGAGTGTGCTGCCCGATATGTTTAGGGAAACATATAATGCTATTACCAAAGGCAACCCTATGTGGAATAGTTTATCTGTTCCATCTGGCAATCTTTATGCCTGGGACTCTACATCAACTTATATTCATGAGCCACCTTATTTTAAAGGCATGAGCATGTCTCCCCCAGGCTCCCATGGAGTGAAGAATGCTTACTGTTTGCTCAACTTTGGAGACAGTATTACCACTGACCACATCTCTCCAGCTGGCAGCATACATAAGGATAGTCCTGCAGCCAGATACCTTACAGAACGTGGGGTCGATAGACGAGACTTCAACTCCTATGGAAGTCGCCGTGGCAATGATGAGGTGATGGCAAGAGGAACTTTTGCCAATATTCGTATTGTGAACAAATTCCTAAATGGAGAAGTTGGACCTAAAACTATACATGTTCCTTCTGGGGAGAAGTTATCAGTCTTCGATGCGGCAAATAAATACAAGAGTGAGGGGCACGATACAATTATTTTGGCTGGTGCAGAGTATGGGAGTGGAAGTTCTCGTGATTGGGCTGCAAAGGGACCAATGCTACTGGGCGTGAAAGCTGTCATAGCAAAAAGCTTTGAGAGGATTCACCGTAGTAATTTGGTGGGAATGGGCATAATTCCTTTGTGTTTCAAGTCTGGGGAAGATGCCGATACTCTTGGATTGACCGGTCATGAACGTTACACCATTGATCTTCCAAGCAGTGTGAATGAAATTCGACCTGGTCAAGATATCACGGTGGTGACAGACAATGGGAAGACATTTTCATGTACCCTGAGATTTGATACAGAGGTTGAACTTGCTTACTTCAATCATGGAGGCATCTTACAATACGCCATCAGAAACTTGATCAATGCTAAACATTGA
Protein sequence

>Msa0838470

MATQNPFNNILTTLEKPGGGGEFGKYFSLQALNDSRIDALPYSIRILLESAIRNCDEFQVKSDDVEKIIDWKNTSPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNRLGGDSNKINPLVPVDLVIDHSVQVDVARSENAVQANMELEFQRNKERFGFLKWGSNAFNNMLVVPPGSGIVHQVNLEYLGRVVFNTNGVLYPDSVVGTDSHTTMIDGLGVAGWGVGGKLRSGVTATDLVLTVTQMLRKHGVVGKFVEFYGEGMSELPLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDETVSMIESYLRANKMFVDYNEPQVERVYSSYLELNLEDVEPCVSGPKRPHDRVTLKEMKADWHACLNNKVGFKGFAVPKESQTKFAEFKFHETPAKLKHGDVVIAAITSCTNTSNPSVMLGAALVAKKACDLGLQVKPWIKTSLAPGSGVVTKYLQKSGLQPYLNQLGFNIVGYGCTTCIGNSGDINEAVASAITENDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVNIDFDTEPIGIAKDGKQIFFRDIWPSSEEIADVVQSSVLPDMFRETYNAITKGNPMWNSLSVPSGNLYAWDSTSTYIHEPPYFKGMSMSPPGSHGVKNAYCLLNFGDSITTDHISPAGSIHKDSPAARYLTERGVDRRDFNSYGSRRGNDEVMARGTFANIRIVNKFLNGEVGPKTIHVPSGEKLSVFDAANKYKSEGHDTIILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKSGEDADTLGLTGHERYTIDLPSSVNEIRPGQDITVVTDNGKTFSCTLRFDTEVELAYFNHGGILQYAIRNLINAKH*