AlfalfaGEDB | Msa0840250

M. sativa cultivar zhongmu-4 / Msa0840250

KEGG: -
GO: GO:0000003 GO:0000151 GO:0000278 GO:0000281 GO:0000902 GO:0000904 GO:0000910 GO:0001508 GO:0001932 GO:0001933 GO:0002028 GO:0003008 GO:0003254 GO:0003674 GO:0003824 GO:0004842 GO:0005198 GO:0005200 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0005783 GO:0005794 GO:0005829 GO:0005856 GO:0005886 GO:0005911 GO:0006464 GO:0006807 GO:0006810 GO:0006888 GO:0006892 GO:0006893 GO:0006996 GO:0007009 GO:0007010 GO:0007016 GO:0007049 GO:0007154 GO:0007275 GO:0007399 GO:0007409 GO:0007528 GO:0008037 GO:0008092 GO:0008104 GO:0008150 GO:0008152 GO:0009314 GO:0009416 GO:0009553 GO:0009566 GO:0009567 GO:0009628 GO:0009639 GO:0009642 GO:0009644 GO:0009653 GO:0009743 GO:0009744 GO:0009889 GO:0009891 GO:0009892 GO:0009893 GO:0009962 GO:0009963 GO:0009986 GO:0009987 GO:0009988 GO:0010033 GO:0010035 GO:0010038 GO:0010218 GO:0010256 GO:0010313 GO:0010468 GO:0010563 GO:0010604 GO:0010605 GO:0010628 GO:0010646 GO:0010647 GO:0010649 GO:0010650 GO:0010765 GO:0010959 GO:0010960 GO:0012505 GO:0014704 GO:0014731 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0016192 GO:0016323 GO:0016328 GO:0016528 GO:0016529 GO:0016567 GO:0016740 GO:0019220 GO:0019222 GO:0019226 GO:0019228 GO:0019538 GO:0019787 GO:0019899 GO:0019953 GO:0022008 GO:0022402 GO:0022407 GO:0022409 GO:0022412 GO:0022414 GO:0022607 GO:0022898 GO:0023052 GO:0030016 GO:0030017 GO:0030018 GO:0030030 GO:0030054 GO:0030154 GO:0030155 GO:0030182 GO:0030315 GO:0030424 GO:0030425 GO:0030507 GO:0030674 GO:0031175 GO:0031323 GO:0031324 GO:0031399 GO:0031400 GO:0031537 GO:0031539 GO:0031540 GO:0031542 GO:0031594 GO:0031625 GO:0031674 GO:0032026 GO:0032268 GO:0032269 GO:0032386 GO:0032388 GO:0032409 GO:0032410 GO:0032411 GO:0032412 GO:0032413 GO:0032414 GO:0032446 GO:0032501 GO:0032502 GO:0032504 GO:0032507 GO:0032879 GO:0032880 GO:0032989 GO:0032990 GO:0032991 GO:0033036 GO:0033157 GO:0033267 GO:0033268 GO:0034110 GO:0034112 GO:0034285 GO:0034613 GO:0034762 GO:0034763 GO:0034764 GO:0034765 GO:0034766 GO:0034767 GO:0035637 GO:0036211 GO:0036477 GO:0042221 GO:0042325 GO:0042326 GO:0042383 GO:0042391 GO:0042592 GO:0042886 GO:0042995 GO:0043001 GO:0043005 GO:0043034 GO:0043170 GO:0043194 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043266 GO:0043267 GO:0043269 GO:0043270 GO:0043271 GO:0043292 GO:0043412 GO:0044085 GO:0044091 GO:0044092 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044291 GO:0044304 GO:0044325 GO:0044389 GO:0044422 GO:0044424 GO:0044425 GO:0044444 GO:0044449 GO:0044456 GO:0044459 GO:0044463 GO:0044464 GO:0044703 GO:0045026 GO:0045184 GO:0045185 GO:0045202 GO:0045211 GO:0045296 GO:0045760 GO:0045785 GO:0045838 GO:0045936 GO:0046907 GO:0048193 GO:0048229 GO:0048468 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048666 GO:0048667 GO:0048699 GO:0048731 GO:0048812 GO:0048856 GO:0048858 GO:0048869 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0050808 GO:0050839 GO:0050877 GO:0050896 GO:0051049 GO:0051050 GO:0051051 GO:0051171 GO:0051172 GO:0051174 GO:0051179 GO:0051222 GO:0051223 GO:0051234 GO:0051235 GO:0051246 GO:0051248 GO:0051301 GO:0051641 GO:0051649 GO:0051651 GO:0051704 GO:0051716 GO:0055065 GO:0055080 GO:0060090 GO:0060255 GO:0060341 GO:0061024 GO:0061025 GO:0061564 GO:0061640 GO:0061936 GO:0061951 GO:0065007 GO:0065008 GO:0065009 GO:0070201 GO:0070647 GO:0070727 GO:0070887 GO:0071241 GO:0071248 GO:0071286 GO:0071702 GO:0071704 GO:0071705 GO:0071709 GO:0071840 GO:0071944 GO:0072507 GO:0072657 GO:0072658 GO:0072659 GO:0072660 GO:0080090 GO:0080173 GO:0090087 GO:0090150 GO:0090313 GO:0090314 GO:0090316 GO:0097060 GO:0097447 GO:0097458 GO:0098590 GO:0098771 GO:0098794 GO:0098876 GO:0098900 GO:0098901 GO:0098902 GO:0099080 GO:0099081 GO:0099512 GO:0120025 GO:0120036 GO:0120038 GO:0120039 GO:0140096 GO:1900825 GO:1900827 GO:1901016 GO:1901017 GO:1901379 GO:1901380 GO:1901564 GO:1901700 GO:1902259 GO:1902260 GO:1902305 GO:1902307 GO:1902494 GO:1903047 GO:1903533 GO:1903817 GO:1903827 GO:1903829 GO:1904062 GO:1904063 GO:1904064 GO:1904181 GO:1904951 GO:1905475 GO:1905477 GO:1990234 GO:1990778 GO:2000649 GO:2000651 GO:2001257 GO:2001258 GO:2001259
PFAM: PF12796.10

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0840250	XP_003612573.2	98.256	172	3	0	1	172	1	172	3.03e-122	352

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0840250	sp\|Q9FF09\|PIA1_ARATH	69.143	175	51	2	1	172	1	175	1.70e-83	246

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0840250	G7K6R1	98.256	172	3	0	1	172	1	172	1.45e-122	352

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0801740	Msa0840250	0.916959	9.498631e-86	-8.615850e-47
Msa0840250	Msa1462060	0.800089	1.697258e-48	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0840250	MtrunA17_Chr5g0409081	98.256	172	3	0	1	172	1	172	2.79e-126	352
Msa0840250	MtrunA17_Chr2g0303671	30.872	149	94	3	11	156	160	302	3.92e-13	65.9
Msa0840250	MtrunA17_Chr5g0418551	37.000	100	57	2	26	125	87	180	4.40e-12	62.4
Msa0840250	MtrunA17_Chr2g0327711	38.136	118	64	4	26	141	132	242	2.24e-11	61.2
Msa0840250	MtrunA17_Chr6g0461061	37.000	100	57	2	26	125	394	487	4.09e-11	60.5
Msa0840250	MtrunA17_Chr3g0127131	33.645	107	65	2	27	133	235	335	5.96e-11	59.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0840250	AT5G07840.1	69.143	175	51	2	1	172	1	175	1.73e-84	246
Msa0840250	AT5G61230.1	71.519	158	41	2	1	156	1	156	3.15e-78	231
Msa0840250	AT2G03430.1	43.000	100	51	2	26	125	80	173	2.72e-13	65.9
Msa0840250	AT5G40160.1	30.556	144	90	4	18	157	171	308	2.61e-11	61.2
Msa0840250	AT5G53470.1	32.258	124	75	4	32	155	221	335	2.69e-11	61.2
Msa0840250	AT5G02620.5	35.043	117	69	4	26	141	122	232	5.20e-11	60.5
Msa0840250	AT5G02620.2	35.043	117	69	4	26	141	122	232	5.20e-11	60.5
Msa0840250	AT5G02620.4	35.043	117	69	4	26	141	122	232	5.34e-11	60.5
Msa0840250	AT5G02620.1	35.043	117	69	4	26	141	122	232	5.34e-11	60.5
Msa0840250	AT5G02620.3	35.043	117	69	4	26	141	122	232	5.34e-11	60.5
Msa0840250	AT2G43850.2	42.708	96	49	2	33	128	82	171	9.99e-11	59.7

Find 115 sgRNAs with CRISPR-Local

Find 242 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TGTTACAGTCGTGCAATTTA+AGG	0.156372	5_4:+15855503	Msa0840250:three_prime_UTR
TTATAATTGGTAATCGAATA+AGG	0.191622	5_4:-15852705	None:intergenic
AAGATTGGATTCATTATAAT+TGG	0.192827	5_4:-15852718	None:intergenic
CATAGTAAGTTGTTTATTTC+GGG	0.195209	5_4:-15855350	None:intergenic
GGACTTTGTCGCAACGAAAT+TGG	0.234333	5_4:-15853101	None:intergenic
GCATAGTAAGTTGTTTATTT+CGG	0.242323	5_4:-15855351	None:intergenic
AACTTACTATGCATATAGTA+TGG	0.245986	5_4:+15855362	Msa0840250:three_prime_UTR
CTTAGTTCTGGCATCAATAT+TGG	0.262291	5_4:-15854939	None:intergenic
TTTCGAAATTAGAAGATAAT+AGG	0.277123	5_4:-15852846	None:intergenic
TCCTCTCTTTAGCTGCAATA+TGG	0.279082	5_4:-15855090	None:intergenic
TCCCTTTGCACCTTATTGTT+TGG	0.291952	5_4:+15852780	Msa0840250:five_prime_UTR
GGGGTCACGCCTTTAGATTT+TGG	0.294756	5_4:-15854854	None:intergenic
CGAATAAGGGTAAAGGAATT+GGG	0.295937	5_4:-15852691	None:intergenic
TCGAATAAGGGTAAAGGAAT+TGG	0.310059	5_4:-15852692	None:intergenic
CGAAGGAGGTTGTTGAGGCC+TGG	0.313233	5_4:+15853128	Msa0840250:CDS
CGTGCAATTTAAGGTTTCTT+TGG	0.317050	5_4:+15855512	Msa0840250:three_prime_UTR
TTGCAGCTAAAGAGAGGAAT+AGG	0.325717	5_4:+15855095	Msa0840250:CDS
TACTTTGAGAATCTAGGGTT+TGG	0.335194	5_4:+15852986	Msa0840250:five_prime_UTR
GAAGGAGGTTGTTGAGGCCT+GGG	0.337003	5_4:+15853129	Msa0840250:CDS
GTGTGGAATTACCATTGTTA+TGG	0.357884	5_4:+15855458	Msa0840250:three_prime_UTR
GAATGATTGGCCAAACAATA+AGG	0.358828	5_4:-15852790	None:intergenic
TACACTTACTTTGAGAATCT+AGG	0.380510	5_4:+15852980	Msa0840250:five_prime_UTR
ATTACTGCCCAGGACTTGAA+TGG	0.394427	5_4:+15855197	Msa0840250:CDS
AGATTGTGAACAACGAAGAT+TGG	0.403102	5_4:-15852733	None:intergenic
TTACATCTTCTCCTTCTCCT+AGG	0.406952	5_4:+15852550	Msa0840250:five_prime_UTR
AGATTCAGCGTTTGTTATCA+AGG	0.409716	5_4:+15852927	Msa0840250:five_prime_UTR
ATTGAGATTGCAGAGTTGAA+TGG	0.419417	5_4:-15852603	None:intergenic
ATTGCAGAGTTGAATGGAAA+AGG	0.420769	5_4:-15852597	None:intergenic
ACTTTGAGAATCTAGGGTTT+GGG	0.424710	5_4:+15852987	Msa0840250:five_prime_UTR
ACGAGTCTGGCGGGAATGAT+TGG	0.425248	5_4:-15852803	None:intergenic
TAGGGATGCTGTGAAATTCT+TGG	0.430272	5_4:+15855114	Msa0840250:CDS
GTATTATTGTTTGAATATGT+TGG	0.431546	5_4:+15855388	Msa0840250:three_prime_UTR
TGTGAGAGAAGACATGCTTC+AGG	0.432571	5_4:+15853073	Msa0840250:exon
GCCACAAGCACCCTTAGTTC+TGG	0.432585	5_4:-15854951	None:intergenic
TCAGTGATTTGATTGATGTT+CGG	0.433959	5_4:+15855303	Msa0840250:three_prime_UTR
AGGAATTGGGGAAAAGGAAA+AGG	0.442944	5_4:-15852678	None:intergenic
ACGAAGAGAATTAACGAGTC+TGG	0.443842	5_4:-15852816	None:intergenic
TACATCTTCTCCTTCTCCTA+GGG	0.446837	5_4:+15852551	Msa0840250:five_prime_UTR
TATAATTGGTAATCGAATAA+GGG	0.450887	5_4:-15852704	None:intergenic
TCATAGGCCCATTCAAGTCC+TGG	0.450896	5_4:-15855205	None:intergenic
AAAATCAAATTGAAGAGAAA+GGG	0.451528	5_4:-15852869	None:intergenic
TTGCAGAGTTGAATGGAAAA+GGG	0.451820	5_4:-15852596	None:intergenic
GGGTAAAGGAATTGGGGAAA+AGG	0.461554	5_4:-15852684	None:intergenic
AAGTCTCTTCATTTCCTCAT+AGG	0.467730	5_4:-15855221	None:intergenic
CAATATTGATGCCAGAACTA+AGG	0.481725	5_4:+15854940	Msa0840250:CDS
GGAATTGGGGAAAAGGAAAA+GGG	0.481962	5_4:-15852677	None:intergenic
ACACTTACTTTGAGAATCTA+GGG	0.487956	5_4:+15852981	Msa0840250:five_prime_UTR
CTCCACCTTGCTGCCGAAGG+TGG	0.490968	5_4:+15854878	Msa0840250:CDS
GCCAAACAATAAGGTGCAAA+GGG	0.497494	5_4:-15852781	None:intergenic
CACTCCGAGATGACCACCTT+CGG	0.497622	5_4:-15854891	None:intergenic
GATTCAGCGTTTGTTATCAA+GGG	0.501847	5_4:+15852928	Msa0840250:five_prime_UTR
GCTGCCGAAGGTGGTCATCT+CGG	0.507384	5_4:+15854887	Msa0840250:CDS
TTACTGCCCAGGACTTGAAT+GGG	0.512016	5_4:+15855198	Msa0840250:CDS
GTGAAATTCTTGGTAGAGAA+TGG	0.513179	5_4:+15855124	Msa0840250:CDS
CTTCGGCAGCAAGGTGGAGA+GGG	0.515210	5_4:-15854874	None:intergenic
TGCAGCTAAAGAGAGGAATA+GGG	0.519744	5_4:+15855096	Msa0840250:CDS
AGAGAATTAACGAGTCTGGC+GGG	0.523455	5_4:-15852812	None:intergenic
TATGTGTAATCATTTATTCA+CGG	0.528623	5_4:+15855436	Msa0840250:three_prime_UTR
TATTGTTTGAATATGTTGGT+CGG	0.528949	5_4:+15855392	Msa0840250:three_prime_UTR
TGGTAATCGAATAAGGGTAA+AGG	0.530609	5_4:-15852698	None:intergenic
AGGACTTGAATGGGCCTATG+AGG	0.531270	5_4:+15855207	Msa0840250:CDS
CCTCTCCACCTTGCTGCCGA+AGG	0.532516	5_4:+15854875	Msa0840250:CDS
AATCTGCTATCATTGATATC+CGG	0.533897	5_4:-15855160	None:intergenic
AAAGCTTCTCAACGAAGGAA+TGG	0.535311	5_4:+15854808	Msa0840250:CDS
TTGATACTGATGATAGAGGT+TGG	0.535680	5_4:+15853153	Msa0840250:CDS
AGGTGCAAAGGGATTCAAGC+CGG	0.536439	5_4:-15852770	None:intergenic
GAATCGAATCAGATGAATCC+TGG	0.539029	5_4:-15852645	None:intergenic
CCTCCTCTTCATTACTGCCC+AGG	0.539604	5_4:+15855187	Msa0840250:CDS
AGGTGGTCATCTCGGAGTGA+TGG	0.540638	5_4:+15854895	Msa0840250:CDS
GAATCCTGGTTTCATTTGAA+CGG	0.547940	5_4:-15852631	None:intergenic
AATATTGATGCCAGAACTAA+GGG	0.549077	5_4:+15854941	Msa0840250:CDS
GAATGGAAAAGGGATGAAGA+AGG	0.550048	5_4:-15852586	None:intergenic
GGCCAAACAATAAGGTGCAA+AGG	0.552499	5_4:-15852782	None:intergenic
AAGGAGGTTGTTGAGGCCTG+GGG	0.557016	5_4:+15853130	Msa0840250:CDS
GAGCTGCAAGATGTGTCCTC+CGG	0.558005	5_4:-15855262	None:intergenic
AAGGAGGAATATGAAACCCT+AGG	0.558041	5_4:-15852567	None:intergenic
TGGAAAAGGGATGAAGAAGG+AGG	0.558669	5_4:-15852583	None:intergenic
GCATGGGGCCCAAAATCTAA+AGG	0.559905	5_4:+15854845	Msa0840250:CDS
CATAGGCCCATTCAAGTCCT+GGG	0.560704	5_4:-15855204	None:intergenic
CCTTCGGCAGCAAGGTGGAG+AGG	0.564920	5_4:-15854875	None:intergenic
GAATATGAAACCCTAGGAGA+AGG	0.567629	5_4:-15852561	None:intergenic
CTTCATGTTTATGCAAGGAA+AGG	0.570970	5_4:+15853182	Msa0840250:CDS
ACTTACTATGCATATAGTAT+GGG	0.571177	5_4:+15855363	Msa0840250:three_prime_UTR
AAGGAAAGGTGATATTAAGC+TGG	0.572436	5_4:+15853196	Msa0840250:CDS
GAATAAGGGTAAAGGAATTG+GGG	0.573949	5_4:-15852690	None:intergenic
GAATGGAGCATTCTTGCCAC+CGG	0.577208	5_4:+15855141	Msa0840250:CDS
CCTCGCTTCATGTTTATGCA+AGG	0.580909	5_4:+15853177	Msa0840250:CDS
TGGATGTTAATGTGACTGCA+TGG	0.583622	5_4:+15854828	Msa0840250:CDS
TTCTCCGTTCAAATGAAACC+AGG	0.588420	5_4:+15852627	Msa0840250:five_prime_UTR
CTTCGCGAAGGAGGTTGTTG+AGG	0.590897	5_4:+15853123	Msa0840250:CDS
GGTGCAAAGGGATTCAAGCC+GGG	0.593453	5_4:-15852769	None:intergenic
TCCATATTGCAGCTAAAGAG+AGG	0.596526	5_4:+15855089	Msa0840250:CDS
CTATCATCAGTATCAACCCC+AGG	0.598054	5_4:-15853146	None:intergenic
TCGACAGCAAGAATTATCTC+CGG	0.599712	5_4:+15855243	Msa0840250:CDS
GTAATCATTTATTCACGGTG+TGG	0.607510	5_4:+15855441	Msa0840250:three_prime_UTR
GATGACCACCTTCGGCAGCA+AGG	0.610444	5_4:-15854883	None:intergenic
TTCGGCAGCAAGGTGGAGAG+GGG	0.614770	5_4:-15854873	None:intergenic
GCCAGAACTAAGGGTGCTTG+TGG	0.615169	5_4:+15854950	Msa0840250:CDS
CTCAACAACCTCCTTCGCGA+AGG	0.617083	5_4:-15853122	None:intergenic
GACAAAGTCCTTCGCGAAGG+AGG	0.622537	5_4:+15853114	Msa0840250:CDS
AGTCCTGGGCAGTAATGAAG+AGG	0.632969	5_4:-15855190	None:intergenic
GAGAAGACATGCTTCAGGAG+AGG	0.635852	5_4:+15853078	Msa0840250:exon
CCTGGGCAGTAATGAAGAGG+AGG	0.640191	5_4:-15855187	None:intergenic
TCTTTAGCTGCAATATGGAG+CGG	0.641697	5_4:-15855085	None:intergenic
GGATGTTAATGTGACTGCAT+GGG	0.642233	5_4:+15854829	Msa0840250:CDS
TGCGACAAAGTCCTTCGCGA+AGG	0.643930	5_4:+15853111	Msa0840250:CDS
CTGCTATCATTGATATCCGG+TGG	0.644744	5_4:-15855157	None:intergenic
GGGGTTGATACTGATGATAG+AGG	0.648484	5_4:+15853149	Msa0840250:CDS
AAGAGAATTAACGAGTCTGG+CGG	0.655067	5_4:-15852813	None:intergenic
GATGTTAATGTGACTGCATG+GGG	0.662007	5_4:+15854830	Msa0840250:CDS
GGAAAAGGAAAAGGGAACGA+AGG	0.673688	5_4:-15852669	None:intergenic
CCTTGCATAAACATGAAGCG+AGG	0.684018	5_4:-15853177	None:intergenic
GACCACCTTCGGCAGCAAGG+TGG	0.692091	5_4:-15854880	None:intergenic
ACAGCAAGAATTATCTCCGG+AGG	0.696504	5_4:+15855246	Msa0840250:CDS
ATGGATGAACTGCTTGAGCG+TGG	0.700290	5_4:+15854914	Msa0840250:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTTTTTTTACATGATATTAA+AGG	-	chr5_4:15852896-15852915	None:intergenic	10.0%
!!	GAATAAAAAAAATCAAAATT+TGG	-	chr5_4:15855036-15855055	None:intergenic	10.0%
!!!	TATATGAATGTTTTATTATG+AGG	+	chr5_4:15853305-15853324	Msa0840250:intron	15.0%
!!!	ATATGAATGTTTTATTATGA+GGG	+	chr5_4:15853306-15853325	Msa0840250:intron	15.0%
!!!	TATAATTGGTAATCGAATAA+GGG	-	chr5_4:15852707-15852726	None:intergenic	20.0%
!!!	TTATAATTGGTAATCGAATA+AGG	-	chr5_4:15852708-15852727	None:intergenic	20.0%
!!	AAGATTGGATTCATTATAAT+TGG	-	chr5_4:15852721-15852740	None:intergenic	20.0%
!!	TTTCGAAATTAGAAGATAAT+AGG	-	chr5_4:15852849-15852868	None:intergenic	20.0%
!!	AAAATCAAATTGAAGAGAAA+GGG	-	chr5_4:15852872-15852891	None:intergenic	20.0%
!!	AAAAATCAAATTGAAGAGAA+AGG	-	chr5_4:15852873-15852892	None:intergenic	20.0%
!!!	AAATTGACTATGTTTTACTT+CGG	+	chr5_4:15853251-15853270	Msa0840250:intron	20.0%
!!	ACCAAATAAATCTAAGTAAA+GGG	-	chr5_4:15853392-15853411	None:intergenic	20.0%
!!	AACCAAATAAATCTAAGTAA+AGG	-	chr5_4:15853393-15853412	None:intergenic	20.0%
!!!	CCATATTTTATTTTGTAGAT+GGG	+	chr5_4:15853462-15853481	Msa0840250:intron	20.0%
!!	ATTTGTCTAATATTCACATA+AGG	+	chr5_4:15853523-15853542	Msa0840250:intron	20.0%
!!	TATAATATCATTAGGAGATA+AGG	+	chr5_4:15853561-15853580	Msa0840250:intron	20.0%
!!	TTATACTTAAAAATCCTGTT+AGG	-	chr5_4:15854339-15854358	None:intergenic	20.0%
!!!	TGATAATTTTCTACTCTTAA+AGG	-	chr5_4:15854727-15854746	None:intergenic	20.0%
!!	GTATTATTGTTTGAATATGT+TGG	+	chr5_4:15855388-15855407	Msa0840250:three_prime_UTR	20.0%
!!	TATGTGTAATCATTTATTCA+CGG	+	chr5_4:15855436-15855455	Msa0840250:three_prime_UTR	20.0%
!	AAGATAAATAATGTGCAAGA+AGG	+	chr5_4:15853352-15853371	Msa0840250:intron	25.0%
!!!	TTAGATTTATTTGGTTTGAG+TGG	+	chr5_4:15853397-15853416	Msa0840250:intron	25.0%
!	AATAAAATATGGCTTTCAGT+AGG	-	chr5_4:15853454-15853473	None:intergenic	25.0%
!!!	GCCATATTTTATTTTGTAGA+TGG	+	chr5_4:15853461-15853480	Msa0840250:intron	25.0%
!	CCCATCTACAAAATAAAATA+TGG	-	chr5_4:15853465-15853484	None:intergenic	25.0%
!!!	TATTTTATTTTGTAGATGGG+AGG	+	chr5_4:15853465-15853484	Msa0840250:intron	25.0%
!!!	ATTTTATTTTGTAGATGGGA+GGG	+	chr5_4:15853466-15853485	Msa0840250:intron	25.0%
!	ATGTATTCTCAAAAACATAG+AGG	+	chr5_4:15853720-15853739	Msa0840250:intron	25.0%
!!	AATTTTACAGTGTGCTATAT+TGG	+	chr5_4:15853848-15853867	Msa0840250:intron	25.0%
!	AAGTTATGACTAATGAGTTA+AGG	+	chr5_4:15854085-15854104	Msa0840250:intron	25.0%
!	AGTTATGACTAATGAGTTAA+GGG	+	chr5_4:15854086-15854105	Msa0840250:intron	25.0%
!	ATTAACAAACAGTCGTTATT+GGG	+	chr5_4:15854471-15854490	Msa0840250:intron	25.0%
!!!	TTATAATGTTGTTTCTGAAC+AGG	+	chr5_4:15854781-15854800	Msa0840250:intron	25.0%
!	ACTAATATGGAAGTCTATAT+GGG	-	chr5_4:15854994-15855013	None:intergenic	25.0%
!	TACTAATATGGAAGTCTATA+TGG	-	chr5_4:15854995-15855014	None:intergenic	25.0%
!	GACAGATAGATATACTAATA+TGG	-	chr5_4:15855007-15855026	None:intergenic	25.0%
!	CATAGTAAGTTGTTTATTTC+GGG	-	chr5_4:15855353-15855372	None:intergenic	25.0%
!	GCATAGTAAGTTGTTTATTT+CGG	-	chr5_4:15855354-15855373	None:intergenic	25.0%
!	AACTTACTATGCATATAGTA+TGG	+	chr5_4:15855362-15855381	Msa0840250:three_prime_UTR	25.0%
!	ACTTACTATGCATATAGTAT+GGG	+	chr5_4:15855363-15855382	Msa0840250:three_prime_UTR	25.0%
!	TATTGTTTGAATATGTTGGT+CGG	+	chr5_4:15855392-15855411	Msa0840250:three_prime_UTR	25.0%
!	AAAAAACAAGTCCATAACAA+TGG	-	chr5_4:15855472-15855491	None:intergenic	25.0%
!!	ATCAAGGGTTTTTGTTTGAA+CGG	+	chr5_4:15852943-15852962	Msa0840250:five_prime_UTR	30.0%
!	TACACTTACTTTGAGAATCT+AGG	+	chr5_4:15852980-15852999	Msa0840250:five_prime_UTR	30.0%
!	ACACTTACTTTGAGAATCTA+GGG	+	chr5_4:15852981-15853000	Msa0840250:five_prime_UTR	30.0%
!	TGTTTTACTTCGGAATTTTG+TGG	+	chr5_4:15853261-15853280	Msa0840250:intron	30.0%
	GCCCTTTACTTAGATTTATT+TGG	+	chr5_4:15853388-15853407	Msa0840250:intron	30.0%
	TGTCTAATATTCACATAAGG+TGG	+	chr5_4:15853526-15853545	Msa0840250:intron	30.0%
!!!	GGTTAGTTTCTGCATTTTAT+TGG	+	chr5_4:15853582-15853601	Msa0840250:intron	30.0%
!	GGTCAATTTTCTTGAGATTT+AGG	+	chr5_4:15853603-15853622	Msa0840250:intron	30.0%
	TAATCCAGCTATATGAATTG+AGG	+	chr5_4:15853690-15853709	Msa0840250:intron	30.0%
	GTACTATTCAAATTCAACCT+AGG	-	chr5_4:15853784-15853803	None:intergenic	30.0%
	AGGTTGAATTTGAATAGTAC+AGG	+	chr5_4:15853784-15853803	Msa0840250:intron	30.0%
	GGTTGAATTTGAATAGTACA+GGG	+	chr5_4:15853785-15853804	Msa0840250:intron	30.0%
!	GCTATCAATCTAGAGTTATT+TGG	-	chr5_4:15854027-15854046	None:intergenic	30.0%
	TGGTGAATTTGTAGAAGTAA+CGG	+	chr5_4:15854120-15854139	Msa0840250:intron	30.0%
	TAACTAATTGCAACCATCTA+AGG	-	chr5_4:15854288-15854307	None:intergenic	30.0%
	TTAGATGGTTGCAATTAGTT+AGG	+	chr5_4:15854287-15854306	Msa0840250:intron	30.0%
	TTCTATACAGCTCTTGTAAA+AGG	+	chr5_4:15854362-15854381	Msa0840250:intron	30.0%
	CATTAACAAACAGTCGTTAT+TGG	+	chr5_4:15854470-15854489	Msa0840250:intron	30.0%
!	TTTTGTAAACACAGCAATGA+AGG	-	chr5_4:15854602-15854621	None:intergenic	30.0%
	ATTATCACACTTGAAGTGTA+AGG	+	chr5_4:15854740-15854759	Msa0840250:intron	30.0%
	TTATCACACTTGAAGTGTAA+GGG	+	chr5_4:15854741-15854760	Msa0840250:intron	30.0%
	AATATTGATGCCAGAACTAA+GGG	+	chr5_4:15854941-15854960	Msa0840250:CDS	30.0%
!	ATTTTGTTCTCCTTAAACCA+GGG	+	chr5_4:15855059-15855078	Msa0840250:intron	30.0%
	AATCTGCTATCATTGATATC+CGG	-	chr5_4:15855163-15855182	None:intergenic	30.0%
	TCAGTGATTTGATTGATGTT+CGG	+	chr5_4:15855303-15855322	Msa0840250:three_prime_UTR	30.0%
	TTGCAGAGTTGAATGGAAAA+GGG	-	chr5_4:15852599-15852618	None:intergenic	35.0%
	ATTGCAGAGTTGAATGGAAA+AGG	-	chr5_4:15852600-15852619	None:intergenic	35.0%
	ATTGAGATTGCAGAGTTGAA+TGG	-	chr5_4:15852606-15852625	None:intergenic	35.0%
	GAATCCTGGTTTCATTTGAA+CGG	-	chr5_4:15852634-15852653	None:intergenic	35.0%
	GAATAAGGGTAAAGGAATTG+GGG	-	chr5_4:15852693-15852712	None:intergenic	35.0%
	CGAATAAGGGTAAAGGAATT+GGG	-	chr5_4:15852694-15852713	None:intergenic	35.0%
	TCGAATAAGGGTAAAGGAAT+TGG	-	chr5_4:15852695-15852714	None:intergenic	35.0%
	TGGTAATCGAATAAGGGTAA+AGG	-	chr5_4:15852701-15852720	None:intergenic	35.0%
	AGATTGTGAACAACGAAGAT+TGG	-	chr5_4:15852736-15852755	None:intergenic	35.0%
!	GTTCACAATCTTCGTGTTTT+CGG	+	chr5_4:15852745-15852764	Msa0840250:five_prime_UTR	35.0%
!	GAATGATTGGCCAAACAATA+AGG	-	chr5_4:15852793-15852812	None:intergenic	35.0%
!!	AGATTCAGCGTTTGTTATCA+AGG	+	chr5_4:15852927-15852946	Msa0840250:five_prime_UTR	35.0%
!!	GATTCAGCGTTTGTTATCAA+GGG	+	chr5_4:15852928-15852947	Msa0840250:five_prime_UTR	35.0%
!	TACTTTGAGAATCTAGGGTT+TGG	+	chr5_4:15852986-15853005	Msa0840250:five_prime_UTR	35.0%
!	ACTTTGAGAATCTAGGGTTT+GGG	+	chr5_4:15852987-15853006	Msa0840250:five_prime_UTR	35.0%
	TTGATACTGATGATAGAGGT+TGG	+	chr5_4:15853153-15853172	Msa0840250:CDS	35.0%
	CTTCATGTTTATGCAAGGAA+AGG	+	chr5_4:15853182-15853201	Msa0840250:CDS	35.0%
	AAGGAAAGGTGATATTAAGC+TGG	+	chr5_4:15853196-15853215	Msa0840250:CDS	35.0%
!	TGGCTTCAGTTATGAGATTT+TGG	+	chr5_4:15853417-15853436	Msa0840250:intron	35.0%
!	GGCTTCAGTTATGAGATTTT+GGG	+	chr5_4:15853418-15853437	Msa0840250:intron	35.0%
!	GCTTCAGTTATGAGATTTTG+GGG	+	chr5_4:15853419-15853438	Msa0840250:intron	35.0%
	TGTACCTCAATTCATATAGC+TGG	-	chr5_4:15853697-15853716	None:intergenic	35.0%
	GTAGATGAATCTACTGAGAA+GGG	+	chr5_4:15853749-15853768	Msa0840250:intron	35.0%
	AACTTGCAATTGAAAGTCGT+TGG	+	chr5_4:15853878-15853897	Msa0840250:intron	35.0%
	TCGTTGGTACAGTTAAACAT+TGG	+	chr5_4:15853894-15853913	Msa0840250:intron	35.0%
	TGGTACAGTTAAACATTGGA+AGG	+	chr5_4:15853898-15853917	Msa0840250:intron	35.0%
	GGTACAGTTAAACATTGGAA+GGG	+	chr5_4:15853899-15853918	Msa0840250:intron	35.0%
!	ATTGATAGCATAGCATTGAG+AGG	+	chr5_4:15854038-15854057	Msa0840250:intron	35.0%
!	TTGATAGCATAGCATTGAGA+GGG	+	chr5_4:15854039-15854058	Msa0840250:intron	35.0%
	GGTGAATTTGTAGAAGTAAC+GGG	+	chr5_4:15854121-15854140	Msa0840250:intron	35.0%
	TACATTTGTAGAGTGTGAAG+TGG	+	chr5_4:15854194-15854213	Msa0840250:intron	35.0%
!	ATCATCGACTAAAGTAAGCA+AGG	-	chr5_4:15854670-15854689	None:intergenic	35.0%
	GTAAAAAAGCTTCTCAACGA+AGG	+	chr5_4:15854803-15854822	Msa0840250:CDS	35.0%
!!	CTTAGTTCTGGCATCAATAT+TGG	-	chr5_4:15854942-15854961	None:intergenic	35.0%
	CAATATTGATGCCAGAACTA+AGG	+	chr5_4:15854940-15854959	Msa0840250:CDS	35.0%
!	GATTTTGTTCTCCTTAAACC+AGG	+	chr5_4:15855058-15855077	Msa0840250:intron	35.0%
	GTGAAATTCTTGGTAGAGAA+TGG	+	chr5_4:15855124-15855143	Msa0840250:CDS	35.0%
	AAGTCTCTTCATTTCCTCAT+AGG	-	chr5_4:15855224-15855243	None:intergenic	35.0%
	GTAATCATTTATTCACGGTG+TGG	+	chr5_4:15855441-15855460	Msa0840250:three_prime_UTR	35.0%
	GTGTGGAATTACCATTGTTA+TGG	+	chr5_4:15855458-15855477	Msa0840250:three_prime_UTR	35.0%
	TGTTACAGTCGTGCAATTTA+AGG	+	chr5_4:15855503-15855522	Msa0840250:three_prime_UTR	35.0%
!	CGTGCAATTTAAGGTTTCTT+TGG	+	chr5_4:15855512-15855531	Msa0840250:three_prime_UTR	35.0%
	TTACATCTTCTCCTTCTCCT+AGG	+	chr5_4:15852550-15852569	Msa0840250:five_prime_UTR	40.0%
	TACATCTTCTCCTTCTCCTA+GGG	+	chr5_4:15852551-15852570	Msa0840250:five_prime_UTR	40.0%
	GAATATGAAACCCTAGGAGA+AGG	-	chr5_4:15852564-15852583	None:intergenic	40.0%
	AAGGAGGAATATGAAACCCT+AGG	-	chr5_4:15852570-15852589	None:intergenic	40.0%
	GAATGGAAAAGGGATGAAGA+AGG	-	chr5_4:15852589-15852608	None:intergenic	40.0%
	TTCTCCGTTCAAATGAAACC+AGG	+	chr5_4:15852627-15852646	Msa0840250:five_prime_UTR	40.0%
	GAATCGAATCAGATGAATCC+TGG	-	chr5_4:15852648-15852667	None:intergenic	40.0%
	GGAATTGGGGAAAAGGAAAA+GGG	-	chr5_4:15852680-15852699	None:intergenic	40.0%
	AGGAATTGGGGAAAAGGAAA+AGG	-	chr5_4:15852681-15852700	None:intergenic	40.0%
	TCCCTTTGCACCTTATTGTT+TGG	+	chr5_4:15852780-15852799	Msa0840250:five_prime_UTR	40.0%
	GCCAAACAATAAGGTGCAAA+GGG	-	chr5_4:15852784-15852803	None:intergenic	40.0%
	AAGAGAATTAACGAGTCTGG+CGG	-	chr5_4:15852816-15852835	None:intergenic	40.0%
	ACGAAGAGAATTAACGAGTC+TGG	-	chr5_4:15852819-15852838	None:intergenic	40.0%
!!	AAGGGTTTTTGTTTGAACGG+AGG	+	chr5_4:15852946-15852965	Msa0840250:five_prime_UTR	40.0%
	CGTAGATGAATCTACTGAGA+AGG	+	chr5_4:15853748-15853767	Msa0840250:intron	40.0%
	ATGAATCTACTGAGAAGGGA+AGG	+	chr5_4:15853753-15853772	Msa0840250:intron	40.0%
	TGAATAGTACAGGGCTAAAG+AGG	+	chr5_4:15853794-15853813	Msa0840250:intron	40.0%
	GAATAGTACAGGGCTAAAGA+GGG	+	chr5_4:15853795-15853814	Msa0840250:intron	40.0%
	AATAGTACAGGGCTAAAGAG+GGG	+	chr5_4:15853796-15853815	Msa0840250:intron	40.0%
	CAATCAGTTGCACATTACGT+TGG	+	chr5_4:15853923-15853942	Msa0840250:intron	40.0%
!	TGATAGCATAGCATTGAGAG+GGG	+	chr5_4:15854040-15854059	Msa0840250:intron	40.0%
	AGGGGTTGTTTGTAGATTCA+TGG	+	chr5_4:15854058-15854077	Msa0840250:intron	40.0%
	TAATGAGTTAAGGGTGACCA+GGG	+	chr5_4:15854095-15854114	Msa0840250:intron	40.0%
	CTAGTCTACACCTTCTATGT+TGG	-	chr5_4:15854221-15854240	None:intergenic	40.0%
!	CATAGAAGGTGTAGACTAGA+TGG	+	chr5_4:15854222-15854241	Msa0840250:intron	40.0%
!	GATGACAAGTTTGTTTGACG+AGG	+	chr5_4:15854244-15854263	Msa0840250:intron	40.0%
!	TGACTTGCAAGATCCTTAGA+TGG	+	chr5_4:15854272-15854291	Msa0840250:intron	40.0%
	GTTACGCAGTATTGTTCACA+CGG	+	chr5_4:15854312-15854331	Msa0840250:intron	40.0%
!	CTTGTAAAAGGTGCAAGGAA+TGG	+	chr5_4:15854374-15854393	Msa0840250:intron	40.0%
!	AAAGGTGCAAGGAATGGTTA+TGG	+	chr5_4:15854380-15854399	Msa0840250:intron	40.0%
	CAATTTACCGAAGTGATTGC+TGG	+	chr5_4:15854409-15854428	Msa0840250:intron	40.0%
	CATAAGACCAGCAATCACTT+CGG	-	chr5_4:15854419-15854438	None:intergenic	40.0%
	AACAGTCGTTATTGGGTATG+AGG	+	chr5_4:15854478-15854497	Msa0840250:intron	40.0%
!	AAGTTGGTTGCAAGCATCAA+CGG	-	chr5_4:15854519-15854538	None:intergenic	40.0%
!!!	TTTTAGCTCCCAACATGCAT+CGG	-	chr5_4:15854554-15854573	None:intergenic	40.0%
!	CACAGCAATGAAGGTGTAAA+GGG	-	chr5_4:15854593-15854612	None:intergenic	40.0%
!	ACACAGCAATGAAGGTGTAA+AGG	-	chr5_4:15854594-15854613	None:intergenic	40.0%
	GTCGATGATTCATGAACTGT+TGG	+	chr5_4:15854681-15854700	Msa0840250:intron	40.0%
	AAAGCTTCTCAACGAAGGAA+TGG	+	chr5_4:15854808-15854827	Msa0840250:CDS	40.0%
	TGGATGTTAATGTGACTGCA+TGG	+	chr5_4:15854828-15854847	Msa0840250:CDS	40.0%
	GGATGTTAATGTGACTGCAT+GGG	+	chr5_4:15854829-15854848	Msa0840250:CDS	40.0%
	GATGTTAATGTGACTGCATG+GGG	+	chr5_4:15854830-15854849	Msa0840250:CDS	40.0%
	TCTTTAGCTGCAATATGGAG+CGG	-	chr5_4:15855088-15855107	None:intergenic	40.0%
	TCCATATTGCAGCTAAAGAG+AGG	+	chr5_4:15855089-15855108	Msa0840250:CDS	40.0%
	TCCTCTCTTTAGCTGCAATA+TGG	-	chr5_4:15855093-15855112	None:intergenic	40.0%
	TTGCAGCTAAAGAGAGGAAT+AGG	+	chr5_4:15855095-15855114	Msa0840250:CDS	40.0%
	TGCAGCTAAAGAGAGGAATA+GGG	+	chr5_4:15855096-15855115	Msa0840250:CDS	40.0%
	TAGGGATGCTGTGAAATTCT+TGG	+	chr5_4:15855114-15855133	Msa0840250:CDS	40.0%
	TCGACAGCAAGAATTATCTC+CGG	+	chr5_4:15855243-15855262	Msa0840250:CDS	40.0%
	TGGAAAAGGGATGAAGAAGG+AGG	-	chr5_4:15852586-15852605	None:intergenic	45.0%
	GGAAAAGGAAAAGGGAACGA+AGG	-	chr5_4:15852672-15852691	None:intergenic	45.0%
	GGGTAAAGGAATTGGGGAAA+AGG	-	chr5_4:15852687-15852706	None:intergenic	45.0%
!	AATCTTCGTGTTTTCGGACC+CGG	+	chr5_4:15852751-15852770	Msa0840250:five_prime_UTR	45.0%
	GGCCAAACAATAAGGTGCAA+AGG	-	chr5_4:15852785-15852804	None:intergenic	45.0%
	AGAGAATTAACGAGTCTGGC+GGG	-	chr5_4:15852815-15852834	None:intergenic	45.0%
	TGTGAGAGAAGACATGCTTC+AGG	+	chr5_4:15853073-15853092	Msa0840250:exon	45.0%
	GGACTTTGTCGCAACGAAAT+TGG	-	chr5_4:15853104-15853123	None:intergenic	45.0%
	CTATCATCAGTATCAACCCC+AGG	-	chr5_4:15853149-15853168	None:intergenic	45.0%
!!	GGGGTTGATACTGATGATAG+AGG	+	chr5_4:15853149-15853168	Msa0840250:CDS	45.0%
	CCTTGCATAAACATGAAGCG+AGG	-	chr5_4:15853180-15853199	None:intergenic	45.0%
	CCTCGCTTCATGTTTATGCA+AGG	+	chr5_4:15853177-15853196	Msa0840250:CDS	45.0%
	GAGAAGGGAAGGTTATTCCT+AGG	+	chr5_4:15853764-15853783	Msa0840250:intron	45.0%
	TGGACAGTTATGACCAGAAG+AGG	+	chr5_4:15853943-15853962	Msa0840250:intron	45.0%
	GGACAGTTATGACCAGAAGA+GGG	+	chr5_4:15853944-15853963	Msa0840250:intron	45.0%
	GACAGTTATGACCAGAAGAG+GGG	+	chr5_4:15853945-15853964	Msa0840250:intron	45.0%
	CTAATGAGTTAAGGGTGACC+AGG	+	chr5_4:15854094-15854113	Msa0840250:intron	45.0%
	AATGAGTTAAGGGTGACCAG+GGG	+	chr5_4:15854096-15854115	Msa0840250:intron	45.0%
	TCTACAAATTCACCAACCCC+TGG	-	chr5_4:15854115-15854134	None:intergenic	45.0%
	TCAGAGTCACACTTCTAGAC+TGG	-	chr5_4:15854153-15854172	None:intergenic	45.0%
	GTGAAGTGGTCCAACATAGA+AGG	+	chr5_4:15854208-15854227	Msa0840250:intron	45.0%
	ATTGTTCACACGGACCTAAC+AGG	+	chr5_4:15854322-15854341	Msa0840250:intron	45.0%
!	CAGCTCTTGTAAAAGGTGCA+AGG	+	chr5_4:15854369-15854388	Msa0840250:intron	45.0%
	ACAACCAGAACTGTGTCAAC+TGG	-	chr5_4:15854445-15854464	None:intergenic	45.0%
	AACATGCATCGGGGAATTTG+GGG	-	chr5_4:15854543-15854562	None:intergenic	45.0%
	CAACATGCATCGGGGAATTT+GGG	-	chr5_4:15854544-15854563	None:intergenic	45.0%
	CAAATTCCCCGATGCATGTT+GGG	+	chr5_4:15854543-15854562	Msa0840250:intron	45.0%
!	TTTAGCTCCCAACATGCATC+GGG	-	chr5_4:15854553-15854572	None:intergenic	45.0%
	TAAAGGGTGACTAGTGCACA+AGG	-	chr5_4:15854577-15854596	None:intergenic	45.0%
!	GGGTCACGCCTTTAGATTTT+GGG	-	chr5_4:15854856-15854875	None:intergenic	45.0%
	CTGCTATCATTGATATCCGG+TGG	-	chr5_4:15855160-15855179	None:intergenic	45.0%
	ATTACTGCCCAGGACTTGAA+TGG	+	chr5_4:15855197-15855216	Msa0840250:CDS	45.0%
	TTACTGCCCAGGACTTGAAT+GGG	+	chr5_4:15855198-15855217	Msa0840250:CDS	45.0%
	ACAGCAAGAATTATCTCCGG+AGG	+	chr5_4:15855246-15855265	Msa0840250:CDS	45.0%
!!!	TTTTTTAATATAATATCATT+AGG	+	chr5_4:15853553-15853572	Msa0840250:intron	5.0%
	AGGTGCAAAGGGATTCAAGC+CGG	-	chr5_4:15852773-15852792	None:intergenic	50.0%
	GAGAAGACATGCTTCAGGAG+AGG	+	chr5_4:15853078-15853097	Msa0840250:exon	50.0%
	TTATGACCAGAAGAGGGGCT+TGG	+	chr5_4:15853950-15853969	Msa0840250:intron	50.0%
	ATGTGCAGAGCAGCTGTAGA+TGG	+	chr5_4:15853987-15854006	Msa0840250:intron	50.0%
	TGTGCAGAGCAGCTGTAGAT+GGG	+	chr5_4:15853988-15854007	Msa0840250:intron	50.0%
	GAGACCAGTTGACACAGTTC+TGG	+	chr5_4:15854438-15854457	Msa0840250:intron	50.0%
	TGGGTATGAGGTACGACTGT+AGG	+	chr5_4:15854490-15854509	Msa0840250:intron	50.0%
	CCAACATGCATCGGGGAATT+TGG	-	chr5_4:15854545-15854564	None:intergenic	50.0%
	CCAAATTCCCCGATGCATGT+TGG	+	chr5_4:15854542-15854561	Msa0840250:intron	50.0%
	TTAGCTCCCAACATGCATCG+GGG	-	chr5_4:15854552-15854571	None:intergenic	50.0%
	GCATGGGGCCCAAAATCTAA+AGG	+	chr5_4:15854845-15854864	Msa0840250:CDS	50.0%
!	GGGGTCACGCCTTTAGATTT+TGG	-	chr5_4:15854857-15854876	None:intergenic	50.0%
	ATGGATGAACTGCTTGAGCG+TGG	+	chr5_4:15854914-15854933	Msa0840250:CDS	50.0%
!	GAATGGAGCATTCTTGCCAC+CGG	+	chr5_4:15855141-15855160	Msa0840250:CDS	50.0%
	AGTCCTGGGCAGTAATGAAG+AGG	-	chr5_4:15855193-15855212	None:intergenic	50.0%
	CATAGGCCCATTCAAGTCCT+GGG	-	chr5_4:15855207-15855226	None:intergenic	50.0%
	TCATAGGCCCATTCAAGTCC+TGG	-	chr5_4:15855208-15855227	None:intergenic	50.0%
	AGGACTTGAATGGGCCTATG+AGG	+	chr5_4:15855207-15855226	Msa0840250:CDS	50.0%
	GGTGCAAAGGGATTCAAGCC+GGG	-	chr5_4:15852772-15852791	None:intergenic	55.0%
	ACGAGTCTGGCGGGAATGAT+TGG	-	chr5_4:15852806-15852825	None:intergenic	55.0%
	TGCGACAAAGTCCTTCGCGA+AGG	+	chr5_4:15853111-15853130	Msa0840250:CDS	55.0%
	GACAAAGTCCTTCGCGAAGG+AGG	+	chr5_4:15853114-15853133	Msa0840250:CDS	55.0%
	CTCAACAACCTCCTTCGCGA+AGG	-	chr5_4:15853125-15853144	None:intergenic	55.0%
	CTTCGCGAAGGAGGTTGTTG+AGG	+	chr5_4:15853123-15853142	Msa0840250:CDS	55.0%
	GAAGGAGGTTGTTGAGGCCT+GGG	+	chr5_4:15853129-15853148	Msa0840250:CDS	55.0%
	AAGGAGGTTGTTGAGGCCTG+GGG	+	chr5_4:15853130-15853149	Msa0840250:CDS	55.0%
	ATACTGCCAAGCCCCTCTTC+TGG	-	chr5_4:15853959-15853978	None:intergenic	55.0%
	GTGCAGAGCAGCTGTAGATG+GGG	+	chr5_4:15853989-15854008	Msa0840250:intron	55.0%
	AGTTAAGGGTGACCAGGGGT+TGG	+	chr5_4:15854100-15854119	Msa0840250:intron	55.0%
!	TCGGGGAATTTGGGGCAAGT+TGG	-	chr5_4:15854535-15854554	None:intergenic	55.0%
	CACTCCGAGATGACCACCTT+CGG	-	chr5_4:15854894-15854913	None:intergenic	55.0%
	AGGTGGTCATCTCGGAGTGA+TGG	+	chr5_4:15854895-15854914	Msa0840250:CDS	55.0%
!!	GCCAGAACTAAGGGTGCTTG+TGG	+	chr5_4:15854950-15854969	Msa0840250:CDS	55.0%
	GCCACAAGCACCCTTAGTTC+TGG	-	chr5_4:15854954-15854973	None:intergenic	55.0%
	CCTGGGCAGTAATGAAGAGG+AGG	-	chr5_4:15855190-15855209	None:intergenic	55.0%
	CCTCCTCTTCATTACTGCCC+AGG	+	chr5_4:15855187-15855206	Msa0840250:CDS	55.0%
	GAGCTGCAAGATGTGTCCTC+CGG	-	chr5_4:15855265-15855284	None:intergenic	55.0%
	CGAAGGAGGTTGTTGAGGCC+TGG	+	chr5_4:15853128-15853147	Msa0840250:CDS	60.0%
	GTACAGGGCTAAAGAGGGGC+AGG	+	chr5_4:15853800-15853819	Msa0840250:intron	60.0%
	TTCGGCAGCAAGGTGGAGAG+GGG	-	chr5_4:15854876-15854895	None:intergenic	60.0%
	CTTCGGCAGCAAGGTGGAGA+GGG	-	chr5_4:15854877-15854896	None:intergenic	60.0%
	GATGACCACCTTCGGCAGCA+AGG	-	chr5_4:15854886-15854905	None:intergenic	60.0%
	GCTGCCGAAGGTGGTCATCT+CGG	+	chr5_4:15854887-15854906	Msa0840250:CDS	60.0%
	GGAGCGGTGTCCCTGGTTTA+AGG	-	chr5_4:15855072-15855091	None:intergenic	60.0%
	GCAATATGGAGCGGTGTCCC+TGG	-	chr5_4:15855079-15855098	None:intergenic	60.0%
	CCTTCGGCAGCAAGGTGGAG+AGG	-	chr5_4:15854878-15854897	None:intergenic	65.0%
	CCTCTCCACCTTGCTGCCGA+AGG	+	chr5_4:15854875-15854894	Msa0840250:CDS	65.0%
	CTCCACCTTGCTGCCGAAGG+TGG	+	chr5_4:15854878-15854897	Msa0840250:CDS	65.0%
	GACCACCTTCGGCAGCAAGG+TGG	-	chr5_4:15854883-15854902	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr5_4	gene	15852537	15855541	15852537	ID=Msa0840250;Name=Msa0840250
chr5_4	mRNA	15852537	15855541	15852537	ID=Msa0840250-mRNA-1;Parent=Msa0840250;Name=Msa0840250-mRNA-1;_AED=0.04;_eAED=0.04;_QI=549\|1\|1\|1\|1\|1\|3\|247\|172
chr5_4	exon	15852537	15853217	15852537	ID=Msa0840250-mRNA-1:exon:6771;Parent=Msa0840250-mRNA-1
chr5_4	exon	15854803	15854974	15854803	ID=Msa0840250-mRNA-1:exon:6772;Parent=Msa0840250-mRNA-1
chr5_4	exon	15855080	15855541	15855080	ID=Msa0840250-mRNA-1:exon:6773;Parent=Msa0840250-mRNA-1
chr5_4	five_prime_UTR	15852537	15853085	15852537	ID=Msa0840250-mRNA-1:five_prime_utr;Parent=Msa0840250-mRNA-1
chr5_4	CDS	15853086	15853217	15853086	ID=Msa0840250-mRNA-1:cds;Parent=Msa0840250-mRNA-1
chr5_4	CDS	15854803	15854974	15854803	ID=Msa0840250-mRNA-1:cds;Parent=Msa0840250-mRNA-1
chr5_4	CDS	15855080	15855294	15855080	ID=Msa0840250-mRNA-1:cds;Parent=Msa0840250-mRNA-1
chr5_4	three_prime_UTR	15855295	15855541	15855295	ID=Msa0840250-mRNA-1:three_prime_utr;Parent=Msa0840250-mRNA-1

Gene Sequence

>Msa0840250

ATGCTTCAGGAGAGGCCAATTTCGTTGCGACAAAGTCCTTCGCGAAGGAGGTTGTTGAGGCCTGGGGTTGATACTGATGATAGAGGTTGGACCTCGCTTCATGTTTATGCAAGGAAAGGTGATATTAAGCTGGTAAAAAAGCTTCTCAACGAAGGAATGGATGTTAATGTGACTGCATGGGGCCCAAAATCTAAAGGCGTGACCCCTCTCCACCTTGCTGCCGAAGGTGGTCATCTCGGAGTGATGGATGAACTGCTTGAGCGTGGTGCCAATATTGATGCCAGAACTAAGGGTGCTTGTGGCTGGACACCGCTCCATATTGCAGCTAAAGAGAGGAATAGGGATGCTGTGAAATTCTTGGTAGAGAATGGAGCATTCTTGCCACCGGATATCAATGATAGCAGATTTAATCCTCCTCTTCATTACTGCCCAGGACTTGAATGGGCCTATGAGGAAATGAAGAGACTTCGACAGCAAGAATTATCTCCGGAGGACACATCTTGCAGCTCTGAAAATTAA

Protein sequence

>Msa0840250

MLQERPISLRQSPSRRRLLRPGVDTDDRGWTSLHVYARKGDIKLVKKLLNEGMDVNVTAWGPKSKGVTPLHLAAEGGHLGVMDELLERGANIDARTKGACGWTPLHIAAKERNRDAVKFLVENGAFLPPDINDSRFNPPLHYCPGLEWAYEEMKRLRQQELSPEDTSCSSEN*