Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0801740 | XP_003612573.2 | 98.256 | 172 | 3 | 0 | 1 | 172 | 1 | 172 | 3.03e-122 | 352 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0801740 | sp|Q9FF09|PIA1_ARATH | 69.143 | 175 | 51 | 2 | 1 | 172 | 1 | 175 | 1.70e-83 | 246 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0801740 | G7K6R1 | 98.256 | 172 | 3 | 0 | 1 | 172 | 1 | 172 | 1.45e-122 | 352 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0029850 | Msa0801740 | 0.844660 | 6.588962e-59 | -8.615850e-47 |
| Msa0032860 | Msa0801740 | 0.810437 | 1.153416e-50 | -8.615850e-47 |
| Msa0037880 | Msa0801740 | 0.832387 | 9.731703e-56 | -8.615850e-47 |
| Msa0040620 | Msa0801740 | 0.808796 | 2.597348e-50 | -8.615850e-47 |
| Msa0042980 | Msa0801740 | -0.800289 | 1.545367e-48 | -8.615850e-47 |
| Msa0048000 | Msa0801740 | 0.809579 | 1.764820e-50 | -8.615850e-47 |
| Msa0049750 | Msa0801740 | 0.801554 | 8.525660e-49 | -8.615850e-47 |
| Msa0054130 | Msa0801740 | 0.811389 | 7.175408e-51 | -8.615850e-47 |
| Msa0077180 | Msa0801740 | 0.841630 | 4.230270e-58 | -8.615850e-47 |
| Msa0084430 | Msa0801740 | 0.807763 | 4.312506e-50 | -8.615850e-47 |
| Msa0085720 | Msa0801740 | 0.833216 | 6.057441e-56 | -8.615850e-47 |
| Msa0086420 | Msa0801740 | 0.814137 | 1.795640e-51 | -8.615850e-47 |
| Msa0102120 | Msa0801740 | 0.809951 | 1.467889e-50 | -8.615850e-47 |
| Msa0117770 | Msa0801740 | 0.853854 | 1.814643e-61 | -8.615850e-47 |
| Msa0120340 | Msa0801740 | 0.825052 | 5.782652e-54 | -8.615850e-47 |
| Msa0615340 | Msa0801740 | 0.817312 | 3.519933e-52 | -8.615850e-47 |
| Msa0618360 | Msa0801740 | 0.824338 | 8.521777e-54 | -8.615850e-47 |
| Msa0621750 | Msa0801740 | -0.804554 | 2.043447e-49 | -8.615850e-47 |
| Msa0626990 | Msa0801740 | 0.827450 | 1.554222e-54 | -8.615850e-47 |
| Msa0627350 | Msa0801740 | 0.821382 | 4.159826e-53 | -8.615850e-47 |
| Msa0649130 | Msa0801740 | 0.800558 | 1.362490e-48 | -8.615850e-47 |
| Msa0651270 | Msa0801740 | 0.802718 | 4.910698e-49 | -8.615850e-47 |
| Msa0679550 | Msa0801740 | 0.807309 | 5.382202e-50 | -8.615850e-47 |
| Msa0688070 | Msa0801740 | 0.808283 | 3.342096e-50 | -8.615850e-47 |
| Msa0698360 | Msa0801740 | 0.817573 | 3.074603e-52 | -8.615850e-47 |
| Msa0731180 | Msa0801740 | 0.819080 | 1.401181e-52 | -8.615850e-47 |
| Msa0747260 | Msa0801740 | 0.822471 | 2.327703e-53 | -8.615850e-47 |
| Msa0751210 | Msa0801740 | 0.809589 | 1.756047e-50 | -8.615850e-47 |
| Msa0793240 | Msa0801740 | 0.830523 | 2.799591e-55 | -8.615850e-47 |
| Msa0801730 | Msa0801740 | 0.804121 | 2.514815e-49 | -8.615850e-47 |
| Msa0801740 | Msa0803590 | 0.859382 | 4.298535e-63 | -8.615850e-47 |
| Msa0801740 | Msa0831590 | 0.820806 | 5.646759e-53 | -8.615850e-47 |
| Msa0801740 | Msa0840250 | 0.916959 | 9.498631e-86 | -8.615850e-47 |
| Msa0801740 | Msa0845070 | 0.804163 | 2.464378e-49 | -8.615850e-47 |
| Msa0801740 | Msa0864470 | -0.821851 | 3.240186e-53 | -8.615850e-47 |
| Msa0801740 | Msa0876360 | 0.810558 | 1.085919e-50 | -8.615850e-47 |
| Msa0801740 | Msa0876850 | -0.818517 | 1.880677e-52 | -8.615850e-47 |
| Msa0801740 | Msa0879600 | 0.816448 | 5.501546e-52 | -8.615850e-47 |
| Msa0801740 | Msa0896760 | 0.812602 | 3.904345e-51 | -8.615850e-47 |
| Msa0801740 | Msa0924310 | 0.807913 | 4.007418e-50 | -8.615850e-47 |
| Msa0801740 | Msa0946690 | -0.822280 | 2.578226e-53 | -8.615850e-47 |
| Msa0801740 | Msa0981310 | 0.807551 | 4.782642e-50 | -8.615850e-47 |
| Msa0801740 | Msa0982240 | 0.818446 | 1.952479e-52 | -8.615850e-47 |
| Msa0801740 | Msa0982270 | 0.846211 | 2.503978e-59 | -8.615850e-47 |
| Msa0801740 | Msa1003990 | 0.806190 | 9.275761e-50 | -8.615850e-47 |
| Msa0801740 | Msa1031770 | 0.814454 | 1.527897e-51 | -8.615850e-47 |
| Msa0801740 | Msa1039880 | 0.800540 | 1.373984e-48 | -8.615850e-47 |
| Msa0801740 | Msa1070840 | 0.803207 | 3.891317e-49 | -8.615850e-47 |
| Msa0801740 | Msa1075080 | -0.811084 | 8.355333e-51 | -8.615850e-47 |
| Msa0801740 | Msa1079730 | -0.803456 | 3.456661e-49 | -8.615850e-47 |
| Msa0801740 | Msa1092090 | 0.816589 | 5.114542e-52 | -8.615850e-47 |
| Msa0801740 | Msa1096060 | 0.802824 | 4.669292e-49 | -8.615850e-47 |
| Msa0801740 | Msa1100480 | 0.818247 | 2.164916e-52 | -8.615850e-47 |
| Msa0801740 | Msa1102790 | 0.824304 | 8.676650e-54 | -8.615850e-47 |
| Msa0801740 | Msa1118110 | 0.805274 | 1.444732e-49 | -8.615850e-47 |
| Msa0801740 | Msa1118760 | 0.800944 | 1.136269e-48 | -8.615850e-47 |
| Msa0801740 | Msa1124540 | -0.839510 | 1.517812e-57 | -8.615850e-47 |
| Msa0801740 | Msa1130530 | 0.809667 | 1.689500e-50 | -8.615850e-47 |
| Msa0801740 | Msa1163590 | -0.810729 | 9.973742e-51 | -8.615850e-47 |
| Msa0801740 | Msa1168040 | -0.810809 | 9.581228e-51 | -8.615850e-47 |
| Msa0801740 | Msa1170800 | 0.819245 | 1.284995e-52 | -8.615850e-47 |
| Msa0801740 | Msa1174310 | 0.831424 | 1.682355e-55 | -8.615850e-47 |
| Msa0801740 | Msa1177780 | 0.817512 | 3.173007e-52 | -8.615850e-47 |
| Msa0801740 | Msa1178110 | 0.821703 | 3.507508e-53 | -8.615850e-47 |
| Msa0801740 | Msa1183100 | -0.834588 | 2.748189e-56 | -8.615850e-47 |
| Msa0801740 | Msa1199070 | 0.824289 | 8.747917e-54 | -8.615850e-47 |
| Msa0801740 | Msa1202750 | 0.801020 | 1.096578e-48 | -8.615850e-47 |
| Msa0801740 | Msa1202770 | -0.810945 | 8.953181e-51 | -8.615850e-47 |
| Msa0801740 | Msa1207350 | 0.801809 | 7.557873e-49 | -8.615850e-47 |
| Msa0801740 | Msa1207380 | 0.807937 | 3.959377e-50 | -8.615850e-47 |
| Msa0801740 | Msa1224480 | 0.804900 | 1.730013e-49 | -8.615850e-47 |
| Msa0801740 | Msa1224580 | -0.833554 | 4.989298e-56 | -8.615850e-47 |
| Msa0801740 | Msa1230830 | 0.863491 | 2.396550e-64 | -8.615850e-47 |
| Msa0801740 | Msa1233500 | 0.801768 | 7.703606e-49 | -8.615850e-47 |
| Msa0801740 | Msa1235400 | 0.853620 | 2.119126e-61 | -8.615850e-47 |
| Msa0801740 | Msa1237980 | 0.826068 | 3.322060e-54 | -8.615850e-47 |
| Msa0801740 | Msa1257600 | 0.803320 | 3.687659e-49 | -8.615850e-47 |
| Msa0801740 | Msa1258380 | -0.816221 | 6.182987e-52 | -8.615850e-47 |
| Msa0801740 | Msa1263290 | -0.818209 | 2.209046e-52 | -8.615850e-47 |
| Msa0801740 | Msa1270660 | 0.824737 | 6.862485e-54 | -8.615850e-47 |
| Msa0801740 | Msa1270730 | 0.828455 | 8.907095e-55 | -8.615850e-47 |
| Msa0801740 | Msa1276440 | 0.820523 | 6.557060e-53 | -8.615850e-47 |
| Msa0801740 | Msa1276510 | 0.828918 | 6.882548e-55 | -8.615850e-47 |
| Msa0801740 | Msa1305190 | 0.806473 | 8.088675e-50 | -8.615850e-47 |
| Msa0801740 | Msa1307740 | 0.849058 | 4.124872e-60 | -8.615850e-47 |
| Msa0801740 | Msa1314770 | 0.841957 | 3.466757e-58 | -8.615850e-47 |
| Msa0801740 | Msa1322200 | 0.819597 | 1.068111e-52 | -8.615850e-47 |
| Msa0801740 | Msa1335230 | 0.804518 | 2.078431e-49 | -8.615850e-47 |
| Msa0801740 | Msa1335710 | 0.803824 | 2.898307e-49 | -8.615850e-47 |
| Msa0801740 | Msa1341490 | 0.803690 | 3.091176e-49 | -8.615850e-47 |
| Msa0801740 | Msa1341810 | 0.823023 | 1.731618e-53 | -8.615850e-47 |
| Msa0801740 | Msa1342100 | 0.800247 | 1.576343e-48 | -8.615850e-47 |
| Msa0801740 | Msa1348600 | 0.818949 | 1.500527e-52 | -8.615850e-47 |
| Msa0801740 | Msa1351550 | 0.813233 | 2.839786e-51 | -8.615850e-47 |
| Msa0801740 | Msa1373350 | 0.809699 | 1.663376e-50 | -8.615850e-47 |
| Msa0801740 | Msa1374710 | 0.815992 | 6.956714e-52 | -8.615850e-47 |
| Msa0801740 | Msa1376130 | 0.815618 | 8.429696e-52 | -8.615850e-47 |
| Msa0801740 | Msa1376160 | -0.808362 | 3.214408e-50 | -8.615850e-47 |
| Msa0801740 | Msa1376930 | 0.814306 | 1.647962e-51 | -8.615850e-47 |
| Msa0801740 | Msa1377570 | 0.813002 | 3.190432e-51 | -8.615850e-47 |
| Msa0801740 | Msa1378230 | 0.858334 | 8.848832e-63 | -8.615850e-47 |
| Msa0801740 | Msa1397120 | 0.847545 | 1.080533e-59 | -8.615850e-47 |
| Msa0801740 | Msa1403340 | 0.824662 | 7.147859e-54 | -8.615850e-47 |
| Msa0801740 | Msa1403890 | 0.845121 | 4.948952e-59 | -8.615850e-47 |
| Msa0801740 | Msa1404240 | -0.815788 | 7.725433e-52 | -8.615850e-47 |
| Msa0801740 | Msa1407600 | 0.817969 | 2.502833e-52 | -8.615850e-47 |
| Msa0801740 | Msa1423820 | 0.808169 | 3.534353e-50 | -8.615850e-47 |
| Msa0801740 | Msa1426570 | 0.808311 | 3.296947e-50 | -8.615850e-47 |
| Msa0801740 | Msa1437130 | 0.800648 | 1.305860e-48 | -8.615850e-47 |
| Msa0801740 | Msa1437910 | 0.805011 | 1.640136e-49 | -8.615850e-47 |
| Msa0801740 | Msa1444250 | -0.826462 | 2.677361e-54 | -8.615850e-47 |
| Msa0801740 | Msa1444740 | 0.807555 | 4.773819e-50 | -8.615850e-47 |
| Msa0801740 | Msa1447150 | 0.820488 | 6.678993e-53 | -8.615850e-47 |
| Msa0801740 | Msa1451620 | -0.833266 | 5.887928e-56 | -8.615850e-47 |
| Msa0801740 | Msa1453560 | 0.800084 | 1.701344e-48 | -8.615850e-47 |
| Msa0801740 | Msa1462060 | 0.827939 | 1.185832e-54 | -8.615850e-47 |
| Msa0801740 | Msa1462070 | 0.813089 | 3.053071e-51 | -8.615850e-47 |
| Msa0124550 | Msa0801740 | 0.812354 | 4.423557e-51 | -8.615850e-47 |
| Msa0125050 | Msa0801740 | 0.831255 | 1.851332e-55 | -8.615850e-47 |
| Msa0137570 | Msa0801740 | 0.813452 | 2.541812e-51 | -8.615850e-47 |
| Msa0138500 | Msa0801740 | 0.807475 | 4.964974e-50 | -8.615850e-47 |
| Msa0145310 | Msa0801740 | 0.800231 | 1.587820e-48 | -8.615850e-47 |
| Msa0159770 | Msa0801740 | 0.813841 | 2.086858e-51 | -8.615850e-47 |
| Msa0169820 | Msa0801740 | 0.859068 | 5.340316e-63 | -8.615850e-47 |
| Msa0175050 | Msa0801740 | 0.828188 | 1.032731e-54 | -8.615850e-47 |
| Msa0178860 | Msa0801740 | -0.841912 | 3.563726e-58 | -8.615850e-47 |
| Msa0183010 | Msa0801740 | -0.840468 | 8.537630e-58 | -8.615850e-47 |
| Msa0187060 | Msa0801740 | 0.800826 | 1.201323e-48 | -8.615850e-47 |
| Msa0187220 | Msa0801740 | 0.815675 | 8.184880e-52 | -8.615850e-47 |
| Msa0187250 | Msa0801740 | 0.817769 | 2.777230e-52 | -8.615850e-47 |
| Msa0187950 | Msa0801740 | 0.810656 | 1.034316e-50 | -8.615850e-47 |
| Msa0199800 | Msa0801740 | -0.838221 | 3.270022e-57 | -8.615850e-47 |
| Msa0204940 | Msa0801740 | 0.807584 | 4.706703e-50 | -8.615850e-47 |
| Msa0206010 | Msa0801740 | 0.819531 | 1.105947e-52 | -8.615850e-47 |
| Msa0213040 | Msa0801740 | 0.807304 | 5.395847e-50 | -8.615850e-47 |
| Msa0217680 | Msa0801740 | 0.807974 | 3.888084e-50 | -8.615850e-47 |
| Msa0226180 | Msa0801740 | 0.821021 | 5.037804e-53 | -8.615850e-47 |
| Msa0230640 | Msa0801740 | -0.837054 | 6.517562e-57 | -8.615850e-47 |
| Msa0233610 | Msa0801740 | 0.803367 | 3.605596e-49 | -8.615850e-47 |
| Msa0376910 | Msa0801740 | 0.827174 | 1.809887e-54 | -8.615850e-47 |
| Msa0379640 | Msa0801740 | 0.835689 | 1.449975e-56 | -8.615850e-47 |
| Msa0387280 | Msa0801740 | 0.812595 | 3.916746e-51 | -8.615850e-47 |
| Msa0389810 | Msa0801740 | 0.853669 | 2.050437e-61 | -8.615850e-47 |
| Msa0390960 | Msa0801740 | 0.808424 | 3.118439e-50 | -8.615850e-47 |
| Msa0394340 | Msa0801740 | 0.843374 | 1.457475e-58 | -8.615850e-47 |
| Msa0412840 | Msa0801740 | 0.836948 | 6.936021e-57 | -8.615850e-47 |
| Msa0417650 | Msa0801740 | 0.811418 | 7.071328e-51 | -8.615850e-47 |
| Msa0426900 | Msa0801740 | 0.807433 | 5.067312e-50 | -8.615850e-47 |
| Msa0433410 | Msa0801740 | -0.843722 | 1.176807e-58 | -8.615850e-47 |
| Msa0433530 | Msa0801740 | 0.807006 | 6.240714e-50 | -8.615850e-47 |
| Msa0442200 | Msa0801740 | 0.825714 | 4.032502e-54 | -8.615850e-47 |
| Msa0457510 | Msa0801740 | 0.824583 | 7.462174e-54 | -8.615850e-47 |
| Msa0464900 | Msa0801740 | 0.824066 | 9.868815e-54 | -8.615850e-47 |
| Msa0468130 | Msa0801740 | 0.833829 | 4.259948e-56 | -8.615850e-47 |
| Msa0469940 | Msa0801740 | -0.805221 | 1.482057e-49 | -8.615850e-47 |
| Msa0471900 | Msa0801740 | 0.822286 | 2.568861e-53 | -8.615850e-47 |
| Msa0472960 | Msa0801740 | -0.833179 | 6.188803e-56 | -8.615850e-47 |
| Msa0475490 | Msa0801740 | 0.803809 | 2.919331e-49 | -8.615850e-47 |
| Msa0477130 | Msa0801740 | -0.875836 | 2.249726e-68 | -8.615850e-47 |
| Msa0477260 | Msa0801740 | 0.815113 | 1.091757e-51 | -8.615850e-47 |
| Msa0482190 | Msa0801740 | -0.815474 | 9.073538e-52 | -8.615850e-47 |
| Msa0249100 | Msa0801740 | 0.808474 | 3.042828e-50 | -8.615850e-47 |
| Msa0250670 | Msa0801740 | 0.804711 | 1.894573e-49 | -8.615850e-47 |
| Msa0271580 | Msa0801740 | 0.847772 | 9.361700e-60 | -8.615850e-47 |
| Msa0271650 | Msa0801740 | 0.830341 | 3.101765e-55 | -8.615850e-47 |
| Msa0281480 | Msa0801740 | 0.833245 | 5.957638e-56 | -8.615850e-47 |
| Msa0286670 | Msa0801740 | 0.839228 | 1.796624e-57 | -8.615850e-47 |
| Msa0287410 | Msa0801740 | 0.803990 | 2.677170e-49 | -8.615850e-47 |
| Msa0299580 | Msa0801740 | 0.828892 | 6.980715e-55 | -8.615850e-47 |
| Msa0304840 | Msa0801740 | 0.803869 | 2.837837e-49 | -8.615850e-47 |
| Msa0306210 | Msa0801740 | -0.824915 | 6.229956e-54 | -8.615850e-47 |
| Msa0319170 | Msa0801740 | 0.827045 | 1.943031e-54 | -8.615850e-47 |
| Msa0326110 | Msa0801740 | 0.824347 | 8.477831e-54 | -8.615850e-47 |
| Msa0326520 | Msa0801740 | 0.803522 | 3.349388e-49 | -8.615850e-47 |
| Msa0337590 | Msa0801740 | 0.812060 | 5.126253e-51 | -8.615850e-47 |
| Msa0340170 | Msa0801740 | 0.811459 | 6.926752e-51 | -8.615850e-47 |
| Msa0341230 | Msa0801740 | 0.807143 | 5.836833e-50 | -8.615850e-47 |
| Msa0347610 | Msa0801740 | 0.823362 | 1.442597e-53 | -8.615850e-47 |
| Msa0485490 | Msa0801740 | 0.811942 | 5.440006e-51 | -8.615850e-47 |
| Msa0485500 | Msa0801740 | -0.811340 | 7.353769e-51 | -8.615850e-47 |
| Msa0489610 | Msa0801740 | 0.823527 | 1.319993e-53 | -8.615850e-47 |
| Msa0521740 | Msa0801740 | 0.809370 | 1.956958e-50 | -8.615850e-47 |
| Msa0530650 | Msa0801740 | 0.829704 | 4.435508e-55 | -8.615850e-47 |
| Msa0532810 | Msa0801740 | -0.802887 | 4.531523e-49 | -8.615850e-47 |
| Msa0553460 | Msa0801740 | 0.803513 | 3.363990e-49 | -8.615850e-47 |
| Msa0574850 | Msa0801740 | 0.818622 | 1.780766e-52 | -8.615850e-47 |
| Msa0575470 | Msa0801740 | 0.813885 | 2.040698e-51 | -8.615850e-47 |
| Msa0579130 | Msa0801740 | 0.816156 | 6.395693e-52 | -8.615850e-47 |
| Msa0587190 | Msa0801740 | 0.821317 | 4.305848e-53 | -8.615850e-47 |
| Msa0599580 | Msa0801740 | 0.836186 | 1.084393e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0801740 | MtrunA17_Chr5g0409081 | 98.256 | 172 | 3 | 0 | 1 | 172 | 1 | 172 | 2.79e-126 | 352 |
| Msa0801740 | MtrunA17_Chr2g0303671 | 30.872 | 149 | 94 | 3 | 11 | 156 | 160 | 302 | 3.92e-13 | 65.9 |
| Msa0801740 | MtrunA17_Chr5g0418551 | 37.000 | 100 | 57 | 2 | 26 | 125 | 87 | 180 | 4.40e-12 | 62.4 |
| Msa0801740 | MtrunA17_Chr2g0327711 | 38.136 | 118 | 64 | 4 | 26 | 141 | 132 | 242 | 2.24e-11 | 61.2 |
| Msa0801740 | MtrunA17_Chr6g0461061 | 37.000 | 100 | 57 | 2 | 26 | 125 | 394 | 487 | 4.09e-11 | 60.5 |
| Msa0801740 | MtrunA17_Chr3g0127131 | 33.645 | 107 | 65 | 2 | 27 | 133 | 235 | 335 | 5.96e-11 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0801740 | AT5G07840.1 | 69.143 | 175 | 51 | 2 | 1 | 172 | 1 | 175 | 1.73e-84 | 246 |
| Msa0801740 | AT5G61230.1 | 71.519 | 158 | 41 | 2 | 1 | 156 | 1 | 156 | 3.15e-78 | 231 |
| Msa0801740 | AT2G03430.1 | 43.000 | 100 | 51 | 2 | 26 | 125 | 80 | 173 | 2.72e-13 | 65.9 |
| Msa0801740 | AT5G40160.1 | 30.556 | 144 | 90 | 4 | 18 | 157 | 171 | 308 | 2.61e-11 | 61.2 |
| Msa0801740 | AT5G53470.1 | 32.258 | 124 | 75 | 4 | 32 | 155 | 221 | 335 | 2.69e-11 | 61.2 |
| Msa0801740 | AT5G02620.5 | 35.043 | 117 | 69 | 4 | 26 | 141 | 122 | 232 | 5.20e-11 | 60.5 |
| Msa0801740 | AT5G02620.2 | 35.043 | 117 | 69 | 4 | 26 | 141 | 122 | 232 | 5.20e-11 | 60.5 |
| Msa0801740 | AT5G02620.4 | 35.043 | 117 | 69 | 4 | 26 | 141 | 122 | 232 | 5.34e-11 | 60.5 |
| Msa0801740 | AT5G02620.1 | 35.043 | 117 | 69 | 4 | 26 | 141 | 122 | 232 | 5.34e-11 | 60.5 |
| Msa0801740 | AT5G02620.3 | 35.043 | 117 | 69 | 4 | 26 | 141 | 122 | 232 | 5.34e-11 | 60.5 |
| Msa0801740 | AT2G43850.2 | 42.708 | 96 | 49 | 2 | 33 | 128 | 82 | 171 | 9.99e-11 | 59.7 |
Find 120 sgRNAs with CRISPR-Local
Find 248 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTACAGTCGTGCAATTTA+AGG | 0.163304 | 5_3:+15856097 | Msa0801740:three_prime_UTR |
| AGATTCAGCGTTTGTTATTA+AGG | 0.179932 | 5_3:+15853529 | Msa0801740:five_prime_UTR |
| TTATAATTGGTAATCGAATA+AGG | 0.191622 | 5_3:-15853309 | None:intergenic |
| AAGATTGGATTCATTATAAT+TGG | 0.192827 | 5_3:-15853322 | None:intergenic |
| CATAGTAAGTTGTTTATTTC+GGG | 0.195209 | 5_3:-15855944 | None:intergenic |
| GGACTTTGTCGCAACGAAAT+TGG | 0.234333 | 5_3:-15853700 | None:intergenic |
| GCATAGTAAGTTGTTTATTT+CGG | 0.242323 | 5_3:-15855945 | None:intergenic |
| AACTTACTATGCATATAGTA+TGG | 0.245986 | 5_3:+15855956 | Msa0801740:three_prime_UTR |
| CTTAGTTCTGGCATCAATAT+TGG | 0.262291 | 5_3:-15855537 | None:intergenic |
| TTTCGAAATTAGAAGATAAT+AGG | 0.277123 | 5_3:-15853450 | None:intergenic |
| TCCTCTCTTTAGCTGCAATA+TGG | 0.279082 | 5_3:-15855684 | None:intergenic |
| TACTTTGAGAATCTAGGGTT+TGG | 0.280754 | 5_3:+15853588 | Msa0801740:five_prime_UTR |
| TCCCTTTGCACCTTATTGTT+TGG | 0.291952 | 5_3:+15853384 | Msa0801740:five_prime_UTR |
| GGGGTCACGCCTTTAGATTT+AGG | 0.293985 | 5_3:-15855452 | None:intergenic |
| CGAATAAGGGTAAAGGAATT+GGG | 0.295937 | 5_3:-15853295 | None:intergenic |
| GGGTCACGCCTTTAGATTTA+GGG | 0.308028 | 5_3:-15855451 | None:intergenic |
| TCGAATAAGGGTAAAGGAAT+TGG | 0.310059 | 5_3:-15853296 | None:intergenic |
| CGAAGGAGGTTGTTGAGGCC+TGG | 0.313233 | 5_3:+15853727 | Msa0801740:CDS |
| TTGCAGCTAAAGAGAGGAAT+AGG | 0.325717 | 5_3:+15855689 | Msa0801740:CDS |
| GATTCAGCGTTTGTTATTAA+GGG | 0.333923 | 5_3:+15853530 | Msa0801740:five_prime_UTR |
| GAAGGAGGTTGTTGAGGCCT+GGG | 0.337003 | 5_3:+15853728 | Msa0801740:CDS |
| CGTGCAATTTAAGGTGTCTT+TGG | 0.340826 | 5_3:+15856106 | Msa0801740:three_prime_UTR |
| GTGTGGAATTACCATTGTTA+TGG | 0.357884 | 5_3:+15856052 | Msa0801740:three_prime_UTR |
| GAATGATTGGCCAAACAATA+AGG | 0.358828 | 5_3:-15853394 | None:intergenic |
| AACCCTAGATTCTCAAAGTA+AGG | 0.366216 | 5_3:-15853585 | None:intergenic |
| CTTCTCCTTCTCCTTCTCCT+AGG | 0.368225 | 5_3:+15853154 | Msa0801740:five_prime_UTR |
| ACTTTGAGAATCTAGGGTTT+GGG | 0.378329 | 5_3:+15853589 | Msa0801740:five_prime_UTR |
| TACCCTTACTTTGAGAATCT+AGG | 0.393217 | 5_3:+15853582 | Msa0801740:five_prime_UTR |
| ATTACTGCCCAGGACTTGAA+TGG | 0.394427 | 5_3:+15855791 | Msa0801740:CDS |
| AGATTGTGAACAACGAAGAT+TGG | 0.403102 | 5_3:-15853337 | None:intergenic |
| ATTGAGATTGCAGAGTTGAA+TGG | 0.419417 | 5_3:-15853207 | None:intergenic |
| ATTGCAGAGTTGAATGGAAA+AGG | 0.420769 | 5_3:-15853201 | None:intergenic |
| ACGAGTCTGGCGGGAATGAT+TGG | 0.425248 | 5_3:-15853407 | None:intergenic |
| TAGGGATGCTGTGAAATTCT+TGG | 0.430272 | 5_3:+15855708 | Msa0801740:CDS |
| GTATTATTGTTTGAATATGT+TGG | 0.431546 | 5_3:+15855982 | Msa0801740:three_prime_UTR |
| TGTGAGAGAAGACATGCTTC+AGG | 0.432571 | 5_3:+15853672 | Msa0801740:exon |
| GCCACAAGCACCCTTAGTTC+TGG | 0.432585 | 5_3:-15855549 | None:intergenic |
| TCAGTGATTTGATTGATGTT+CGG | 0.433959 | 5_3:+15855897 | Msa0801740:three_prime_UTR |
| TTCTCCTTCTCCTTCTCCTA+GGG | 0.434371 | 5_3:+15853155 | Msa0801740:five_prime_UTR |
| AGGAATTGGGGAAAAGGAAA+AGG | 0.442944 | 5_3:-15853282 | None:intergenic |
| ACGAAGAGAATTAACGAGTC+TGG | 0.443842 | 5_3:-15853420 | None:intergenic |
| TATAATTGGTAATCGAATAA+GGG | 0.450887 | 5_3:-15853308 | None:intergenic |
| TCATAGGCCCATTCAAGTCC+TGG | 0.450896 | 5_3:-15855799 | None:intergenic |
| TTGCAGAGTTGAATGGAAAA+GGG | 0.451820 | 5_3:-15853200 | None:intergenic |
| ACCCTTACTTTGAGAATCTA+GGG | 0.455709 | 5_3:+15853583 | Msa0801740:five_prime_UTR |
| GGGTAAAGGAATTGGGGAAA+AGG | 0.461554 | 5_3:-15853288 | None:intergenic |
| GAAGGAGAAGGAGAAGGAGA+AGG | 0.463599 | 5_3:-15853147 | None:intergenic |
| AAGTCTCTTCATTTCCTCAT+AGG | 0.467730 | 5_3:-15855815 | None:intergenic |
| CAATATTGATGCCAGAACTA+AGG | 0.481725 | 5_3:+15855538 | Msa0801740:CDS |
| GGAATTGGGGAAAAGGAAAA+GGG | 0.481962 | 5_3:-15853281 | None:intergenic |
| CTCCACCTTGCTGCCGAAGG+TGG | 0.490968 | 5_3:+15855476 | Msa0801740:CDS |
| GCCAAACAATAAGGTGCAAA+GGG | 0.497494 | 5_3:-15853385 | None:intergenic |
| CACTCCGAGATGACCACCTT+CGG | 0.497622 | 5_3:-15855489 | None:intergenic |
| GCTGCCGAAGGTGGTCATCT+CGG | 0.507384 | 5_3:+15855485 | Msa0801740:CDS |
| TTACTGCCCAGGACTTGAAT+GGG | 0.512016 | 5_3:+15855792 | Msa0801740:CDS |
| GTGAAATTCTTGGTAGAGAA+TGG | 0.513179 | 5_3:+15855718 | Msa0801740:CDS |
| CTTCGGCAGCAAGGTGGAGA+GGG | 0.515210 | 5_3:-15855472 | None:intergenic |
| TGCAGCTAAAGAGAGGAATA+GGG | 0.519744 | 5_3:+15855690 | Msa0801740:CDS |
| AGAGAATTAACGAGTCTGGC+GGG | 0.523455 | 5_3:-15853416 | None:intergenic |
| TATGTGTAATCATTTATTCA+CGG | 0.528623 | 5_3:+15856030 | Msa0801740:three_prime_UTR |
| TATTGTTTGAATATGTTGGT+CGG | 0.528949 | 5_3:+15855986 | Msa0801740:three_prime_UTR |
| TGGTAATCGAATAAGGGTAA+AGG | 0.530609 | 5_3:-15853302 | None:intergenic |
| AGGACTTGAATGGGCCTATG+AGG | 0.531270 | 5_3:+15855801 | Msa0801740:CDS |
| CCTCTCCACCTTGCTGCCGA+AGG | 0.532516 | 5_3:+15855473 | Msa0801740:CDS |
| AATCTGCTATCATTGATATC+CGG | 0.533897 | 5_3:-15855754 | None:intergenic |
| AAAGCTTCTCAACGAAGGAA+TGG | 0.535311 | 5_3:+15855406 | Msa0801740:CDS |
| TTGATACTGATGATAGAGGT+TGG | 0.535680 | 5_3:+15853752 | Msa0801740:CDS |
| AGGTGCAAAGGGATTCAAGC+CGG | 0.536439 | 5_3:-15853374 | None:intergenic |
| CCTCCTCTTCATTACTGCCC+AGG | 0.539604 | 5_3:+15855781 | Msa0801740:CDS |
| AGGTGGTCATCTCGGAGTGA+TGG | 0.540638 | 5_3:+15855493 | Msa0801740:CDS |
| TGGAAAAGGGATGAAGAAAG+AGG | 0.541614 | 5_3:-15853187 | None:intergenic |
| GGATCGAATCAGATGAATCC+TGG | 0.547365 | 5_3:-15853249 | None:intergenic |
| CTTCATGTTTATGCAAGGAA+AGG | 0.547906 | 5_3:+15853781 | Msa0801740:CDS |
| GAATCCTGGTTTCATTTGAA+CGG | 0.547940 | 5_3:-15853235 | None:intergenic |
| AATATTGATGCCAGAACTAA+GGG | 0.549077 | 5_3:+15855539 | Msa0801740:CDS |
| GCATGGGGCCCTAAATCTAA+AGG | 0.550158 | 5_3:+15855443 | Msa0801740:CDS |
| GGCCAAACAATAAGGTGCAA+AGG | 0.552499 | 5_3:-15853386 | None:intergenic |
| AAGGAGGTTGTTGAGGCCTG+GGG | 0.557016 | 5_3:+15853729 | Msa0801740:CDS |
| GAGCTGCAAGATGTGTCCTC+CGG | 0.558005 | 5_3:-15855856 | None:intergenic |
| AAAGAGGAATATGAAACCCT+AGG | 0.558041 | 5_3:-15853171 | None:intergenic |
| CATAGGCCCATTCAAGTCCT+GGG | 0.560704 | 5_3:-15855798 | None:intergenic |
| GAATATGAAACCCTAGGAGA+AGG | 0.563527 | 5_3:-15853165 | None:intergenic |
| CCTTCGGCAGCAAGGTGGAG+AGG | 0.564920 | 5_3:-15855473 | None:intergenic |
| ACTTACTATGCATATAGTAT+GGG | 0.571177 | 5_3:+15855957 | Msa0801740:three_prime_UTR |
| AAGGAAAGGTGATATTAAGC+TGG | 0.572436 | 5_3:+15853795 | Msa0801740:CDS |
| GAATAAGGGTAAAGGAATTG+GGG | 0.573949 | 5_3:-15853294 | None:intergenic |
| GAATGGAGCATTCTTGCCAC+CGG | 0.577208 | 5_3:+15855735 | Msa0801740:CDS |
| ACCCTAGATTCTCAAAGTAA+GGG | 0.577702 | 5_3:-15853584 | None:intergenic |
| TGGATGTTAATGTGACTGCA+TGG | 0.583622 | 5_3:+15855426 | Msa0801740:CDS |
| AAAGGAAAAGGGAACGAAGG+TGG | 0.584674 | 5_3:-15853270 | None:intergenic |
| CCTCACTTCATGTTTATGCA+AGG | 0.587941 | 5_3:+15853776 | Msa0801740:CDS |
| TTCTCCGTTCAAATGAAACC+AGG | 0.588420 | 5_3:+15853231 | Msa0801740:five_prime_UTR |
| CTTCGCGAAGGAGGTTGTTG+AGG | 0.590897 | 5_3:+15853722 | Msa0801740:CDS |
| CTAGGAGAAGGAGAAGGAGA+AGG | 0.592400 | 5_3:-15853153 | None:intergenic |
| GGTGCAAAGGGATTCAAGCC+GGG | 0.593453 | 5_3:-15853373 | None:intergenic |
| TCCATATTGCAGCTAAAGAG+AGG | 0.596526 | 5_3:+15855683 | Msa0801740:CDS |
| CTATCATCAGTATCAACCCC+AGG | 0.598054 | 5_3:-15853745 | None:intergenic |
| TCGACAGCAAGAATTATCTC+CGG | 0.599712 | 5_3:+15855837 | Msa0801740:CDS |
| GTAATCATTTATTCACGGTG+TGG | 0.607510 | 5_3:+15856035 | Msa0801740:three_prime_UTR |
| GATGACCACCTTCGGCAGCA+AGG | 0.610444 | 5_3:-15855481 | None:intergenic |
| TTCGGCAGCAAGGTGGAGAG+GGG | 0.614770 | 5_3:-15855471 | None:intergenic |
| GCCAGAACTAAGGGTGCTTG+TGG | 0.615169 | 5_3:+15855548 | Msa0801740:CDS |
| CTCAACAACCTCCTTCGCGA+AGG | 0.617083 | 5_3:-15853721 | None:intergenic |
| GACAAAGTCCTTCGCGAAGG+AGG | 0.622537 | 5_3:+15853713 | Msa0801740:CDS |
| AGTCCTGGGCAGTAATGAAG+AGG | 0.632969 | 5_3:-15855784 | None:intergenic |
| GAGAAGACATGCTTCAGGAG+AGG | 0.635852 | 5_3:+15853677 | Msa0801740:exon |
| CCTGGGCAGTAATGAAGAGG+AGG | 0.640191 | 5_3:-15855781 | None:intergenic |
| TCTTTAGCTGCAATATGGAG+CGG | 0.641697 | 5_3:-15855679 | None:intergenic |
| GGATGTTAATGTGACTGCAT+GGG | 0.642233 | 5_3:+15855427 | Msa0801740:CDS |
| TGCGACAAAGTCCTTCGCGA+AGG | 0.643930 | 5_3:+15853710 | Msa0801740:CDS |
| CTGCTATCATTGATATCCGG+TGG | 0.644744 | 5_3:-15855751 | None:intergenic |
| CCTTGCATAAACATGAAGTG+AGG | 0.647744 | 5_3:-15853776 | None:intergenic |
| GGGGTTGATACTGATGATAG+AGG | 0.648484 | 5_3:+15853748 | Msa0801740:CDS |
| GAAACCCTAGGAGAAGGAGA+AGG | 0.650308 | 5_3:-15853159 | None:intergenic |
| AAGAGAATTAACGAGTCTGG+CGG | 0.655067 | 5_3:-15853417 | None:intergenic |
| GATGTTAATGTGACTGCATG+GGG | 0.662007 | 5_3:+15855428 | Msa0801740:CDS |
| GGAAAAGGAAAAGGGAACGA+AGG | 0.673688 | 5_3:-15853273 | None:intergenic |
| GACCACCTTCGGCAGCAAGG+TGG | 0.692091 | 5_3:-15855478 | None:intergenic |
| ACAGCAAGAATTATCTCCGG+AGG | 0.696504 | 5_3:+15855840 | Msa0801740:CDS |
| ATGGATGAACTGCTTGAGCG+TGG | 0.700290 | 5_3:+15855512 | Msa0801740:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAATAAAAAAAATCAAAATT+TGG | - | chr5_3:15855630-15855649 | None:intergenic | 10.0% |
| !!! | TATATGAATGTTTTATTATG+AGG | + | chr5_3:15853904-15853923 | Msa0801740:intron | 15.0% |
| !!! | ATATGAATGTTTTATTATGA+GGG | + | chr5_3:15853905-15853924 | Msa0801740:intron | 15.0% |
| !!! | TATAATTGGTAATCGAATAA+GGG | - | chr5_3:15853311-15853330 | None:intergenic | 20.0% |
| !!! | TTATAATTGGTAATCGAATA+AGG | - | chr5_3:15853312-15853331 | None:intergenic | 20.0% |
| !! | AAGATTGGATTCATTATAAT+TGG | - | chr5_3:15853325-15853344 | None:intergenic | 20.0% |
| !! | TTTCGAAATTAGAAGATAAT+AGG | - | chr5_3:15853453-15853472 | None:intergenic | 20.0% |
| !! | TATTGAAGGAAAAAACAAAT+TGG | - | chr5_3:15853486-15853505 | None:intergenic | 20.0% |
| !!! | CTTTTTTTACATGATATTGA+AGG | - | chr5_3:15853500-15853519 | None:intergenic | 20.0% |
| !!! | AAATTGACTATGTTTTACTT+CGG | + | chr5_3:15853850-15853869 | Msa0801740:intron | 20.0% |
| !! | ACCAAATAAATCTAAGTAAA+GGG | - | chr5_3:15853991-15854010 | None:intergenic | 20.0% |
| !! | AACCAAATAAATCTAAGTAA+AGG | - | chr5_3:15853992-15854011 | None:intergenic | 20.0% |
| !!! | CCATATTTTATTTTGTAGAT+GGG | + | chr5_3:15854061-15854080 | Msa0801740:intron | 20.0% |
| !! | ATTTGTCTAATATTCACATA+AGG | + | chr5_3:15854122-15854141 | Msa0801740:intron | 20.0% |
| !! | TATAATATCATTAGGAGATA+AGG | + | chr5_3:15854160-15854179 | Msa0801740:intron | 20.0% |
| !! | TTATACTTAAAAATCCTGTT+AGG | - | chr5_3:15854938-15854957 | None:intergenic | 20.0% |
| !!! | ATTAACAAACAGTTGTTATT+GGG | + | chr5_3:15855070-15855089 | Msa0801740:intron | 20.0% |
| !! | TTTAGACAGATATACTAATA+TGG | - | chr5_3:15855605-15855624 | None:intergenic | 20.0% |
| !! | GTATTATTGTTTGAATATGT+TGG | + | chr5_3:15855982-15856001 | Msa0801740:three_prime_UTR | 20.0% |
| !! | TATGTGTAATCATTTATTCA+CGG | + | chr5_3:15856030-15856049 | Msa0801740:three_prime_UTR | 20.0% |
| ! | AAAAACAAATTGGAGAGAAA+GGG | - | chr5_3:15853476-15853495 | None:intergenic | 25.0% |
| ! | AAAAAACAAATTGGAGAGAA+AGG | - | chr5_3:15853477-15853496 | None:intergenic | 25.0% |
| !! | ATTAAGGGTTTTTCTTTGAA+CGG | + | chr5_3:15853545-15853564 | Msa0801740:five_prime_UTR | 25.0% |
| ! | AAGATAAATAATGTGCAAGA+AGG | + | chr5_3:15853951-15853970 | Msa0801740:intron | 25.0% |
| !!! | TTAGATTTATTTGGTTTGAG+TGG | + | chr5_3:15853996-15854015 | Msa0801740:intron | 25.0% |
| ! | AATAAAATATGGCTTTCAGT+AGG | - | chr5_3:15854053-15854072 | None:intergenic | 25.0% |
| !!! | GCCATATTTTATTTTGTAGA+TGG | + | chr5_3:15854060-15854079 | Msa0801740:intron | 25.0% |
| ! | CCCATCTACAAAATAAAATA+TGG | - | chr5_3:15854064-15854083 | None:intergenic | 25.0% |
| !!! | TATTTTATTTTGTAGATGGG+AGG | + | chr5_3:15854064-15854083 | Msa0801740:intron | 25.0% |
| !!! | ATTTTATTTTGTAGATGGGA+GGG | + | chr5_3:15854065-15854084 | Msa0801740:intron | 25.0% |
| ! | ATGTATTCTCAAAAACATAG+AGG | + | chr5_3:15854319-15854338 | Msa0801740:intron | 25.0% |
| !! | AATTTTACAGTGTGCTATAT+TGG | + | chr5_3:15854447-15854466 | Msa0801740:intron | 25.0% |
| ! | AAGTTATGACTAATGAGTTA+AGG | + | chr5_3:15854684-15854703 | Msa0801740:intron | 25.0% |
| ! | AGTTATGACTAATGAGTTAA+GGG | + | chr5_3:15854685-15854704 | Msa0801740:intron | 25.0% |
| ! | CATTAACAAACAGTTGTTAT+TGG | + | chr5_3:15855069-15855088 | Msa0801740:intron | 25.0% |
| !! | TGATAATTTTCTACTCTCAA+AGG | - | chr5_3:15855326-15855345 | None:intergenic | 25.0% |
| !!! | TTATAATGTTGTTTCTGAAC+AGG | + | chr5_3:15855379-15855398 | Msa0801740:intron | 25.0% |
| ! | ACTAATATGGAAGTCTATAT+GGG | - | chr5_3:15855592-15855611 | None:intergenic | 25.0% |
| ! | TACTAATATGGAAGTCTATA+TGG | - | chr5_3:15855593-15855612 | None:intergenic | 25.0% |
| ! | CATAGTAAGTTGTTTATTTC+GGG | - | chr5_3:15855947-15855966 | None:intergenic | 25.0% |
| ! | GCATAGTAAGTTGTTTATTT+CGG | - | chr5_3:15855948-15855967 | None:intergenic | 25.0% |
| ! | AACTTACTATGCATATAGTA+TGG | + | chr5_3:15855956-15855975 | Msa0801740:three_prime_UTR | 25.0% |
| ! | ACTTACTATGCATATAGTAT+GGG | + | chr5_3:15855957-15855976 | Msa0801740:three_prime_UTR | 25.0% |
| ! | TATTGTTTGAATATGTTGGT+CGG | + | chr5_3:15855986-15856005 | Msa0801740:three_prime_UTR | 25.0% |
| ! | AAAAAACAAGTCCATAACAA+TGG | - | chr5_3:15856066-15856085 | None:intergenic | 25.0% |
| !! | AGATTCAGCGTTTGTTATTA+AGG | + | chr5_3:15853529-15853548 | Msa0801740:five_prime_UTR | 30.0% |
| !! | GATTCAGCGTTTGTTATTAA+GGG | + | chr5_3:15853530-15853549 | Msa0801740:five_prime_UTR | 30.0% |
| ! | TGTTTTACTTCGGAATTTTG+TGG | + | chr5_3:15853860-15853879 | Msa0801740:intron | 30.0% |
| GCCCTTTACTTAGATTTATT+TGG | + | chr5_3:15853987-15854006 | Msa0801740:intron | 30.0% | |
| !!! | GGAGGGTTTTTTTTAACATT+TGG | + | chr5_3:15854082-15854101 | Msa0801740:intron | 30.0% |
| TGTCTAATATTCACATAAGG+TGG | + | chr5_3:15854125-15854144 | Msa0801740:intron | 30.0% | |
| !!! | GGTTAGTTTCTGCATTTTAT+TGG | + | chr5_3:15854181-15854200 | Msa0801740:intron | 30.0% |
| ! | GGTCAATTTTCTTGAGATTT+AGG | + | chr5_3:15854202-15854221 | Msa0801740:intron | 30.0% |
| TAATCCAGCTATATGAATTG+AGG | + | chr5_3:15854289-15854308 | Msa0801740:intron | 30.0% | |
| AGGTTGAATTTGAATAGTAC+AGG | + | chr5_3:15854383-15854402 | Msa0801740:intron | 30.0% | |
| GGTTGAATTTGAATAGTACA+GGG | + | chr5_3:15854384-15854403 | Msa0801740:intron | 30.0% | |
| ! | GCTATCAATCTAGAGTTATT+TGG | - | chr5_3:15854626-15854645 | None:intergenic | 30.0% |
| TGGTGAATTTGTAGAAGTAA+CGG | + | chr5_3:15854719-15854738 | Msa0801740:intron | 30.0% | |
| TAACTAATTGCAACCATCTA+AGG | - | chr5_3:15854887-15854906 | None:intergenic | 30.0% | |
| TTAGATGGTTGCAATTAGTT+AGG | + | chr5_3:15854886-15854905 | Msa0801740:intron | 30.0% | |
| TTCTATACAGCTCTTGTAAA+AGG | + | chr5_3:15854961-15854980 | Msa0801740:intron | 30.0% | |
| ! | TTTTGTAAACACAGCAATGA+AGG | - | chr5_3:15855201-15855220 | None:intergenic | 30.0% |
| ATTATCACACTTGAAGTGTA+AGG | + | chr5_3:15855339-15855358 | Msa0801740:intron | 30.0% | |
| TTATCACACTTGAAGTGTAA+GGG | + | chr5_3:15855340-15855359 | Msa0801740:intron | 30.0% | |
| AATATTGATGCCAGAACTAA+GGG | + | chr5_3:15855539-15855558 | Msa0801740:CDS | 30.0% | |
| ! | ATTTTGTTCTCCTTAAACCA+GGG | + | chr5_3:15855653-15855672 | Msa0801740:intron | 30.0% |
| AATCTGCTATCATTGATATC+CGG | - | chr5_3:15855757-15855776 | None:intergenic | 30.0% | |
| TCAGTGATTTGATTGATGTT+CGG | + | chr5_3:15855897-15855916 | Msa0801740:three_prime_UTR | 30.0% | |
| AAAGAGGAATATGAAACCCT+AGG | - | chr5_3:15853174-15853193 | None:intergenic | 35.0% | |
| TTGCAGAGTTGAATGGAAAA+GGG | - | chr5_3:15853203-15853222 | None:intergenic | 35.0% | |
| ATTGCAGAGTTGAATGGAAA+AGG | - | chr5_3:15853204-15853223 | None:intergenic | 35.0% | |
| ATTGAGATTGCAGAGTTGAA+TGG | - | chr5_3:15853210-15853229 | None:intergenic | 35.0% | |
| GAATCCTGGTTTCATTTGAA+CGG | - | chr5_3:15853238-15853257 | None:intergenic | 35.0% | |
| GAATAAGGGTAAAGGAATTG+GGG | - | chr5_3:15853297-15853316 | None:intergenic | 35.0% | |
| CGAATAAGGGTAAAGGAATT+GGG | - | chr5_3:15853298-15853317 | None:intergenic | 35.0% | |
| TCGAATAAGGGTAAAGGAAT+TGG | - | chr5_3:15853299-15853318 | None:intergenic | 35.0% | |
| TGGTAATCGAATAAGGGTAA+AGG | - | chr5_3:15853305-15853324 | None:intergenic | 35.0% | |
| AGATTGTGAACAACGAAGAT+TGG | - | chr5_3:15853340-15853359 | None:intergenic | 35.0% | |
| ! | GTTCACAATCTTCGTGTTTT+CGG | + | chr5_3:15853349-15853368 | Msa0801740:five_prime_UTR | 35.0% |
| ! | GAATGATTGGCCAAACAATA+AGG | - | chr5_3:15853397-15853416 | None:intergenic | 35.0% |
| ! | TACCCTTACTTTGAGAATCT+AGG | + | chr5_3:15853582-15853601 | Msa0801740:five_prime_UTR | 35.0% |
| ! | ACCCTTACTTTGAGAATCTA+GGG | + | chr5_3:15853583-15853602 | Msa0801740:five_prime_UTR | 35.0% |
| ACCCTAGATTCTCAAAGTAA+GGG | - | chr5_3:15853587-15853606 | None:intergenic | 35.0% | |
| AACCCTAGATTCTCAAAGTA+AGG | - | chr5_3:15853588-15853607 | None:intergenic | 35.0% | |
| ! | TACTTTGAGAATCTAGGGTT+TGG | + | chr5_3:15853588-15853607 | Msa0801740:five_prime_UTR | 35.0% |
| ! | ACTTTGAGAATCTAGGGTTT+GGG | + | chr5_3:15853589-15853608 | Msa0801740:five_prime_UTR | 35.0% |
| TTGATACTGATGATAGAGGT+TGG | + | chr5_3:15853752-15853771 | Msa0801740:CDS | 35.0% | |
| CTTCATGTTTATGCAAGGAA+AGG | + | chr5_3:15853781-15853800 | Msa0801740:CDS | 35.0% | |
| AAGGAAAGGTGATATTAAGC+TGG | + | chr5_3:15853795-15853814 | Msa0801740:CDS | 35.0% | |
| ! | TGGCTTCAGTTATGAGATTT+TGG | + | chr5_3:15854016-15854035 | Msa0801740:intron | 35.0% |
| ! | GGCTTCAGTTATGAGATTTT+GGG | + | chr5_3:15854017-15854036 | Msa0801740:intron | 35.0% |
| ! | GCTTCAGTTATGAGATTTTG+GGG | + | chr5_3:15854018-15854037 | Msa0801740:intron | 35.0% |
| TGTACCTCAATTCATATAGC+TGG | - | chr5_3:15854296-15854315 | None:intergenic | 35.0% | |
| GTAGATGAATCTACTGAGAA+GGG | + | chr5_3:15854348-15854367 | Msa0801740:intron | 35.0% | |
| AACTTGCAATTGAAAGTCGT+TGG | + | chr5_3:15854477-15854496 | Msa0801740:intron | 35.0% | |
| TCGTTGGTACAGTTAAACAT+TGG | + | chr5_3:15854493-15854512 | Msa0801740:intron | 35.0% | |
| TGGTACAGTTAAACATTGGA+AGG | + | chr5_3:15854497-15854516 | Msa0801740:intron | 35.0% | |
| GGTACAGTTAAACATTGGAA+GGG | + | chr5_3:15854498-15854517 | Msa0801740:intron | 35.0% | |
| CAATCAGTTGCACATTATGT+TGG | + | chr5_3:15854522-15854541 | Msa0801740:intron | 35.0% | |
| ! | ATTGATAGCATAGCATTGAG+AGG | + | chr5_3:15854637-15854656 | Msa0801740:intron | 35.0% |
| ! | TTGATAGCATAGCATTGAGA+GGG | + | chr5_3:15854638-15854657 | Msa0801740:intron | 35.0% |
| GGTGAATTTGTAGAAGTAAC+GGG | + | chr5_3:15854720-15854739 | Msa0801740:intron | 35.0% | |
| TACATTTGTAGAGTGTGAAG+TGG | + | chr5_3:15854793-15854812 | Msa0801740:intron | 35.0% | |
| ! | AACAGTTGTTATTGGGTATG+AGG | + | chr5_3:15855077-15855096 | Msa0801740:intron | 35.0% |
| ! | ATCATCGACTAAAGTAAGCA+AGG | - | chr5_3:15855269-15855288 | None:intergenic | 35.0% |
| GTAAAAAAGCTTCTCAACGA+AGG | + | chr5_3:15855401-15855420 | Msa0801740:CDS | 35.0% | |
| !! | CTTAGTTCTGGCATCAATAT+TGG | - | chr5_3:15855540-15855559 | None:intergenic | 35.0% |
| CAATATTGATGCCAGAACTA+AGG | + | chr5_3:15855538-15855557 | Msa0801740:CDS | 35.0% | |
| ! | GATTTTGTTCTCCTTAAACC+AGG | + | chr5_3:15855652-15855671 | Msa0801740:intron | 35.0% |
| GTGAAATTCTTGGTAGAGAA+TGG | + | chr5_3:15855718-15855737 | Msa0801740:CDS | 35.0% | |
| AAGTCTCTTCATTTCCTCAT+AGG | - | chr5_3:15855818-15855837 | None:intergenic | 35.0% | |
| GTAATCATTTATTCACGGTG+TGG | + | chr5_3:15856035-15856054 | Msa0801740:three_prime_UTR | 35.0% | |
| GTGTGGAATTACCATTGTTA+TGG | + | chr5_3:15856052-15856071 | Msa0801740:three_prime_UTR | 35.0% | |
| TGTTACAGTCGTGCAATTTA+AGG | + | chr5_3:15856097-15856116 | Msa0801740:three_prime_UTR | 35.0% | |
| GAATATGAAACCCTAGGAGA+AGG | - | chr5_3:15853168-15853187 | None:intergenic | 40.0% | |
| TGGAAAAGGGATGAAGAAAG+AGG | - | chr5_3:15853190-15853209 | None:intergenic | 40.0% | |
| TTCTCCGTTCAAATGAAACC+AGG | + | chr5_3:15853231-15853250 | Msa0801740:five_prime_UTR | 40.0% | |
| GGAATTGGGGAAAAGGAAAA+GGG | - | chr5_3:15853284-15853303 | None:intergenic | 40.0% | |
| AGGAATTGGGGAAAAGGAAA+AGG | - | chr5_3:15853285-15853304 | None:intergenic | 40.0% | |
| TCCCTTTGCACCTTATTGTT+TGG | + | chr5_3:15853384-15853403 | Msa0801740:five_prime_UTR | 40.0% | |
| GCCAAACAATAAGGTGCAAA+GGG | - | chr5_3:15853388-15853407 | None:intergenic | 40.0% | |
| AAGAGAATTAACGAGTCTGG+CGG | - | chr5_3:15853420-15853439 | None:intergenic | 40.0% | |
| ACGAAGAGAATTAACGAGTC+TGG | - | chr5_3:15853423-15853442 | None:intergenic | 40.0% | |
| ! | AAGGGTTTTTCTTTGAACGG+AGG | + | chr5_3:15853548-15853567 | Msa0801740:five_prime_UTR | 40.0% |
| CCTTGCATAAACATGAAGTG+AGG | - | chr5_3:15853779-15853798 | None:intergenic | 40.0% | |
| CCTCACTTCATGTTTATGCA+AGG | + | chr5_3:15853776-15853795 | Msa0801740:CDS | 40.0% | |
| CGTAGATGAATCTACTGAGA+AGG | + | chr5_3:15854347-15854366 | Msa0801740:intron | 40.0% | |
| ATGAATCTACTGAGAAGGGA+AGG | + | chr5_3:15854352-15854371 | Msa0801740:intron | 40.0% | |
| GAGAAGGGAAGGTTATTCTT+AGG | + | chr5_3:15854363-15854382 | Msa0801740:intron | 40.0% | |
| TGAATAGTACAGGGCTAAAG+AGG | + | chr5_3:15854393-15854412 | Msa0801740:intron | 40.0% | |
| GAATAGTACAGGGCTAAAGA+GGG | + | chr5_3:15854394-15854413 | Msa0801740:intron | 40.0% | |
| AATAGTACAGGGCTAAAGAG+GGG | + | chr5_3:15854395-15854414 | Msa0801740:intron | 40.0% | |
| ! | TGATAGCATAGCATTGAGAG+GGG | + | chr5_3:15854639-15854658 | Msa0801740:intron | 40.0% |
| AGGGGTTGTTTGTAGATTCA+TGG | + | chr5_3:15854657-15854676 | Msa0801740:intron | 40.0% | |
| TAATGAGTTAAGGGTGACCA+GGG | + | chr5_3:15854694-15854713 | Msa0801740:intron | 40.0% | |
| CTAGTCTACACCTTCTATGT+TGG | - | chr5_3:15854820-15854839 | None:intergenic | 40.0% | |
| ! | CATAGAAGGTGTAGACTAGA+TGG | + | chr5_3:15854821-15854840 | Msa0801740:intron | 40.0% |
| ! | GATGACAAGTTTGTTTGACG+AGG | + | chr5_3:15854843-15854862 | Msa0801740:intron | 40.0% |
| ! | TGACTTGCAAGATCCTTAGA+TGG | + | chr5_3:15854871-15854890 | Msa0801740:intron | 40.0% |
| GTTACGCAGTATTGTTCACA+CGG | + | chr5_3:15854911-15854930 | Msa0801740:intron | 40.0% | |
| ! | CTTGTAAAAGGTGCAAGGAA+TGG | + | chr5_3:15854973-15854992 | Msa0801740:intron | 40.0% |
| ! | AAAGGTGCAAGGAATGGTTA+TGG | + | chr5_3:15854979-15854998 | Msa0801740:intron | 40.0% |
| CAATTTACCGAAGTGATTGC+TGG | + | chr5_3:15855008-15855027 | Msa0801740:intron | 40.0% | |
| CATAAGACCAGCAATCACTT+CGG | - | chr5_3:15855018-15855037 | None:intergenic | 40.0% | |
| ! | AAGTTGGTTGCAAGCATCAA+CGG | - | chr5_3:15855118-15855137 | None:intergenic | 40.0% |
| !!! | TTTTAGCTCCCAACATGCAT+CGG | - | chr5_3:15855153-15855172 | None:intergenic | 40.0% |
| ! | CACAGCAATGAAGGTGTAAA+GGG | - | chr5_3:15855192-15855211 | None:intergenic | 40.0% |
| ! | ACACAGCAATGAAGGTGTAA+AGG | - | chr5_3:15855193-15855212 | None:intergenic | 40.0% |
| GTCGATGATTCATGAACTGT+TGG | + | chr5_3:15855280-15855299 | Msa0801740:intron | 40.0% | |
| AAAGCTTCTCAACGAAGGAA+TGG | + | chr5_3:15855406-15855425 | Msa0801740:CDS | 40.0% | |
| TGGATGTTAATGTGACTGCA+TGG | + | chr5_3:15855426-15855445 | Msa0801740:CDS | 40.0% | |
| GGATGTTAATGTGACTGCAT+GGG | + | chr5_3:15855427-15855446 | Msa0801740:CDS | 40.0% | |
| GATGTTAATGTGACTGCATG+GGG | + | chr5_3:15855428-15855447 | Msa0801740:CDS | 40.0% | |
| TCTTTAGCTGCAATATGGAG+CGG | - | chr5_3:15855682-15855701 | None:intergenic | 40.0% | |
| TCCATATTGCAGCTAAAGAG+AGG | + | chr5_3:15855683-15855702 | Msa0801740:CDS | 40.0% | |
| TCCTCTCTTTAGCTGCAATA+TGG | - | chr5_3:15855687-15855706 | None:intergenic | 40.0% | |
| TTGCAGCTAAAGAGAGGAAT+AGG | + | chr5_3:15855689-15855708 | Msa0801740:CDS | 40.0% | |
| TGCAGCTAAAGAGAGGAATA+GGG | + | chr5_3:15855690-15855709 | Msa0801740:CDS | 40.0% | |
| TAGGGATGCTGTGAAATTCT+TGG | + | chr5_3:15855708-15855727 | Msa0801740:CDS | 40.0% | |
| TCGACAGCAAGAATTATCTC+CGG | + | chr5_3:15855837-15855856 | Msa0801740:CDS | 40.0% | |
| ! | CGTGCAATTTAAGGTGTCTT+TGG | + | chr5_3:15856106-15856125 | Msa0801740:three_prime_UTR | 40.0% |
| TTCTCCTTCTCCTTCTCCTA+GGG | + | chr5_3:15853155-15853174 | Msa0801740:five_prime_UTR | 45.0% | |
| GGATCGAATCAGATGAATCC+TGG | - | chr5_3:15853252-15853271 | None:intergenic | 45.0% | |
| AAAGGAAAAGGGAACGAAGG+TGG | - | chr5_3:15853273-15853292 | None:intergenic | 45.0% | |
| GGAAAAGGAAAAGGGAACGA+AGG | - | chr5_3:15853276-15853295 | None:intergenic | 45.0% | |
| GGGTAAAGGAATTGGGGAAA+AGG | - | chr5_3:15853291-15853310 | None:intergenic | 45.0% | |
| ! | AATCTTCGTGTTTTCGGACC+CGG | + | chr5_3:15853355-15853374 | Msa0801740:five_prime_UTR | 45.0% |
| GGCCAAACAATAAGGTGCAA+AGG | - | chr5_3:15853389-15853408 | None:intergenic | 45.0% | |
| AGAGAATTAACGAGTCTGGC+GGG | - | chr5_3:15853419-15853438 | None:intergenic | 45.0% | |
| TGTGAGAGAAGACATGCTTC+AGG | + | chr5_3:15853672-15853691 | Msa0801740:exon | 45.0% | |
| GGACTTTGTCGCAACGAAAT+TGG | - | chr5_3:15853703-15853722 | None:intergenic | 45.0% | |
| CTATCATCAGTATCAACCCC+AGG | - | chr5_3:15853748-15853767 | None:intergenic | 45.0% | |
| !! | GGGGTTGATACTGATGATAG+AGG | + | chr5_3:15853748-15853767 | Msa0801740:CDS | 45.0% |
| TGGACAGTTATGACCAGAAG+AGG | + | chr5_3:15854542-15854561 | Msa0801740:intron | 45.0% | |
| GGACAGTTATGACCAGAAGA+GGG | + | chr5_3:15854543-15854562 | Msa0801740:intron | 45.0% | |
| GACAGTTATGACCAGAAGAG+GGG | + | chr5_3:15854544-15854563 | Msa0801740:intron | 45.0% | |
| CTAATGAGTTAAGGGTGACC+AGG | + | chr5_3:15854693-15854712 | Msa0801740:intron | 45.0% | |
| AATGAGTTAAGGGTGACCAG+GGG | + | chr5_3:15854695-15854714 | Msa0801740:intron | 45.0% | |
| TCTACAAATTCACCAACCCC+TGG | - | chr5_3:15854714-15854733 | None:intergenic | 45.0% | |
| TCAGAGTCACACTTCTAGAC+TGG | - | chr5_3:15854752-15854771 | None:intergenic | 45.0% | |
| GTGAAGTGGTCCAACATAGA+AGG | + | chr5_3:15854807-15854826 | Msa0801740:intron | 45.0% | |
| ATTGTTCACACGGACCTAAC+AGG | + | chr5_3:15854921-15854940 | Msa0801740:intron | 45.0% | |
| ! | CAGCTCTTGTAAAAGGTGCA+AGG | + | chr5_3:15854968-15854987 | Msa0801740:intron | 45.0% |
| ACAACCAGAACTGTGTCAAC+TGG | - | chr5_3:15855044-15855063 | None:intergenic | 45.0% | |
| AACATGCATCGGGGAATTTG+GGG | - | chr5_3:15855142-15855161 | None:intergenic | 45.0% | |
| CAACATGCATCGGGGAATTT+GGG | - | chr5_3:15855143-15855162 | None:intergenic | 45.0% | |
| CAAATTCCCCGATGCATGTT+GGG | + | chr5_3:15855142-15855161 | Msa0801740:intron | 45.0% | |
| ! | TTTAGCTCCCAACATGCATC+GGG | - | chr5_3:15855152-15855171 | None:intergenic | 45.0% |
| TAAAGGGTGACTAGTGCACA+AGG | - | chr5_3:15855176-15855195 | None:intergenic | 45.0% | |
| GGGTCACGCCTTTAGATTTA+GGG | - | chr5_3:15855454-15855473 | None:intergenic | 45.0% | |
| CTGCTATCATTGATATCCGG+TGG | - | chr5_3:15855754-15855773 | None:intergenic | 45.0% | |
| ATTACTGCCCAGGACTTGAA+TGG | + | chr5_3:15855791-15855810 | Msa0801740:CDS | 45.0% | |
| TTACTGCCCAGGACTTGAAT+GGG | + | chr5_3:15855792-15855811 | Msa0801740:CDS | 45.0% | |
| ACAGCAAGAATTATCTCCGG+AGG | + | chr5_3:15855840-15855859 | Msa0801740:CDS | 45.0% | |
| !!! | TTTTTTAATATAATATCATT+AGG | + | chr5_3:15854152-15854171 | Msa0801740:intron | 5.0% |
| GAAGGAGAAGGAGAAGGAGA+AGG | - | chr5_3:15853144-15853163 | None:intergenic | 50.0% | |
| CTAGGAGAAGGAGAAGGAGA+AGG | - | chr5_3:15853156-15853175 | None:intergenic | 50.0% | |
| CTTCTCCTTCTCCTTCTCCT+AGG | + | chr5_3:15853142-15853161 | Msa0801740:five_prime_UTR | 50.0% | |
| GAAACCCTAGGAGAAGGAGA+AGG | - | chr5_3:15853162-15853181 | None:intergenic | 50.0% | |
| AGGTGCAAAGGGATTCAAGC+CGG | - | chr5_3:15853377-15853396 | None:intergenic | 50.0% | |
| GAGAAGACATGCTTCAGGAG+AGG | + | chr5_3:15853677-15853696 | Msa0801740:exon | 50.0% | |
| TTATGACCAGAAGAGGGGCT+TGG | + | chr5_3:15854549-15854568 | Msa0801740:intron | 50.0% | |
| ATGTGCAGAGCAGCTGTAGA+TGG | + | chr5_3:15854586-15854605 | Msa0801740:intron | 50.0% | |
| TGTGCAGAGCAGCTGTAGAT+GGG | + | chr5_3:15854587-15854606 | Msa0801740:intron | 50.0% | |
| GAGACCAGTTGACACAGTTC+TGG | + | chr5_3:15855037-15855056 | Msa0801740:intron | 50.0% | |
| TGGGTATGAGGTACGACTGT+AGG | + | chr5_3:15855089-15855108 | Msa0801740:intron | 50.0% | |
| CCAACATGCATCGGGGAATT+TGG | - | chr5_3:15855144-15855163 | None:intergenic | 50.0% | |
| CCAAATTCCCCGATGCATGT+TGG | + | chr5_3:15855141-15855160 | Msa0801740:intron | 50.0% | |
| TTAGCTCCCAACATGCATCG+GGG | - | chr5_3:15855151-15855170 | None:intergenic | 50.0% | |
| GCATGGGGCCCTAAATCTAA+AGG | + | chr5_3:15855443-15855462 | Msa0801740:CDS | 50.0% | |
| GGGGTCACGCCTTTAGATTT+AGG | - | chr5_3:15855455-15855474 | None:intergenic | 50.0% | |
| ATGGATGAACTGCTTGAGCG+TGG | + | chr5_3:15855512-15855531 | Msa0801740:CDS | 50.0% | |
| ! | GAATGGAGCATTCTTGCCAC+CGG | + | chr5_3:15855735-15855754 | Msa0801740:CDS | 50.0% |
| AGTCCTGGGCAGTAATGAAG+AGG | - | chr5_3:15855787-15855806 | None:intergenic | 50.0% | |
| CATAGGCCCATTCAAGTCCT+GGG | - | chr5_3:15855801-15855820 | None:intergenic | 50.0% | |
| TCATAGGCCCATTCAAGTCC+TGG | - | chr5_3:15855802-15855821 | None:intergenic | 50.0% | |
| AGGACTTGAATGGGCCTATG+AGG | + | chr5_3:15855801-15855820 | Msa0801740:CDS | 50.0% | |
| GGTGCAAAGGGATTCAAGCC+GGG | - | chr5_3:15853376-15853395 | None:intergenic | 55.0% | |
| ACGAGTCTGGCGGGAATGAT+TGG | - | chr5_3:15853410-15853429 | None:intergenic | 55.0% | |
| TGCGACAAAGTCCTTCGCGA+AGG | + | chr5_3:15853710-15853729 | Msa0801740:CDS | 55.0% | |
| GACAAAGTCCTTCGCGAAGG+AGG | + | chr5_3:15853713-15853732 | Msa0801740:CDS | 55.0% | |
| CTCAACAACCTCCTTCGCGA+AGG | - | chr5_3:15853724-15853743 | None:intergenic | 55.0% | |
| CTTCGCGAAGGAGGTTGTTG+AGG | + | chr5_3:15853722-15853741 | Msa0801740:CDS | 55.0% | |
| GAAGGAGGTTGTTGAGGCCT+GGG | + | chr5_3:15853728-15853747 | Msa0801740:CDS | 55.0% | |
| AAGGAGGTTGTTGAGGCCTG+GGG | + | chr5_3:15853729-15853748 | Msa0801740:CDS | 55.0% | |
| ATACTGCCAAGCCCCTCTTC+TGG | - | chr5_3:15854558-15854577 | None:intergenic | 55.0% | |
| GTGCAGAGCAGCTGTAGATG+GGG | + | chr5_3:15854588-15854607 | Msa0801740:intron | 55.0% | |
| AGTTAAGGGTGACCAGGGGT+TGG | + | chr5_3:15854699-15854718 | Msa0801740:intron | 55.0% | |
| ! | TCGGGGAATTTGGGGCAAGT+TGG | - | chr5_3:15855134-15855153 | None:intergenic | 55.0% |
| CACTCCGAGATGACCACCTT+CGG | - | chr5_3:15855492-15855511 | None:intergenic | 55.0% | |
| AGGTGGTCATCTCGGAGTGA+TGG | + | chr5_3:15855493-15855512 | Msa0801740:CDS | 55.0% | |
| !! | GCCAGAACTAAGGGTGCTTG+TGG | + | chr5_3:15855548-15855567 | Msa0801740:CDS | 55.0% |
| GCCACAAGCACCCTTAGTTC+TGG | - | chr5_3:15855552-15855571 | None:intergenic | 55.0% | |
| CCTGGGCAGTAATGAAGAGG+AGG | - | chr5_3:15855784-15855803 | None:intergenic | 55.0% | |
| CCTCCTCTTCATTACTGCCC+AGG | + | chr5_3:15855781-15855800 | Msa0801740:CDS | 55.0% | |
| GAGCTGCAAGATGTGTCCTC+CGG | - | chr5_3:15855859-15855878 | None:intergenic | 55.0% | |
| CGAAGGAGGTTGTTGAGGCC+TGG | + | chr5_3:15853727-15853746 | Msa0801740:CDS | 60.0% | |
| GTACAGGGCTAAAGAGGGGC+AGG | + | chr5_3:15854399-15854418 | Msa0801740:intron | 60.0% | |
| TTCGGCAGCAAGGTGGAGAG+GGG | - | chr5_3:15855474-15855493 | None:intergenic | 60.0% | |
| CTTCGGCAGCAAGGTGGAGA+GGG | - | chr5_3:15855475-15855494 | None:intergenic | 60.0% | |
| GATGACCACCTTCGGCAGCA+AGG | - | chr5_3:15855484-15855503 | None:intergenic | 60.0% | |
| GCTGCCGAAGGTGGTCATCT+CGG | + | chr5_3:15855485-15855504 | Msa0801740:CDS | 60.0% | |
| GGAGCGGTGTCCCTGGTTTA+AGG | - | chr5_3:15855666-15855685 | None:intergenic | 60.0% | |
| GCAATATGGAGCGGTGTCCC+TGG | - | chr5_3:15855673-15855692 | None:intergenic | 60.0% | |
| CCTTCGGCAGCAAGGTGGAG+AGG | - | chr5_3:15855476-15855495 | None:intergenic | 65.0% | |
| CCTCTCCACCTTGCTGCCGA+AGG | + | chr5_3:15855473-15855492 | Msa0801740:CDS | 65.0% | |
| CTCCACCTTGCTGCCGAAGG+TGG | + | chr5_3:15855476-15855495 | Msa0801740:CDS | 65.0% | |
| GACCACCTTCGGCAGCAAGG+TGG | - | chr5_3:15855481-15855500 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 15853142 | 15856149 | 15853142 | ID=Msa0801740;Name=Msa0801740 |
| chr5_3 | mRNA | 15853142 | 15856149 | 15853142 | ID=Msa0801740-mRNA-1;Parent=Msa0801740;Name=Msa0801740-mRNA-1;_AED=0.01;_eAED=0.01;_QI=543|1|1|1|1|1|3|261|172 |
| chr5_3 | exon | 15853142 | 15853816 | 15853142 | ID=Msa0801740-mRNA-1:exon:6560;Parent=Msa0801740-mRNA-1 |
| chr5_3 | exon | 15855401 | 15855572 | 15855401 | ID=Msa0801740-mRNA-1:exon:6561;Parent=Msa0801740-mRNA-1 |
| chr5_3 | exon | 15855674 | 15856149 | 15855674 | ID=Msa0801740-mRNA-1:exon:6562;Parent=Msa0801740-mRNA-1 |
| chr5_3 | five_prime_UTR | 15853142 | 15853684 | 15853142 | ID=Msa0801740-mRNA-1:five_prime_utr;Parent=Msa0801740-mRNA-1 |
| chr5_3 | CDS | 15853685 | 15853816 | 15853685 | ID=Msa0801740-mRNA-1:cds;Parent=Msa0801740-mRNA-1 |
| chr5_3 | CDS | 15855401 | 15855572 | 15855401 | ID=Msa0801740-mRNA-1:cds;Parent=Msa0801740-mRNA-1 |
| chr5_3 | CDS | 15855674 | 15855888 | 15855674 | ID=Msa0801740-mRNA-1:cds;Parent=Msa0801740-mRNA-1 |
| chr5_3 | three_prime_UTR | 15855889 | 15856149 | 15855889 | ID=Msa0801740-mRNA-1:three_prime_utr;Parent=Msa0801740-mRNA-1 |
| Gene Sequence |
| Protein sequence |
