Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1396750 | XP_024639435.1 | 99.815 | 542 | 1 | 0 | 1 | 542 | 1 | 542 | 0.0 | 1079 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1396750 | sp|Q9SII8|DSK2B_ARATH | 57.904 | 563 | 204 | 12 | 1 | 542 | 1 | 551 | 0.0 | 543 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1396750 | G7K016 | 99.815 | 542 | 1 | 0 | 1 | 542 | 1 | 542 | 0.0 | 1079 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0009220 | Msa1396750 | 0.807819 | 4.194529e-50 | -8.615850e-47 |
| Msa0027540 | Msa1396750 | -0.805712 | 1.169148e-49 | -8.615850e-47 |
| Msa0033160 | Msa1396750 | 0.806228 | 9.110444e-50 | -8.615850e-47 |
| Msa0034560 | Msa1396750 | 0.812894 | 3.369672e-51 | -8.615850e-47 |
| Msa0038350 | Msa1396750 | 0.842423 | 2.609551e-58 | -8.615850e-47 |
| Msa0044240 | Msa1396750 | 0.815408 | 9.389186e-52 | -8.615850e-47 |
| Msa0046660 | Msa1396750 | 0.862542 | 4.709136e-64 | -8.615850e-47 |
| Msa0049650 | Msa1396750 | 0.868460 | 6.424456e-66 | -8.615850e-47 |
| Msa0054730 | Msa1396750 | 0.811304 | 7.484517e-51 | -8.615850e-47 |
| Msa0074950 | Msa1396750 | 0.827709 | 1.346969e-54 | -8.615850e-47 |
| Msa0075310 | Msa1396750 | -0.804292 | 2.317196e-49 | -8.615850e-47 |
| Msa0090770 | Msa1396750 | 0.837420 | 5.251848e-57 | -8.615850e-47 |
| Msa0091770 | Msa1396750 | -0.802645 | 5.084418e-49 | -8.615850e-47 |
| Msa0101320 | Msa1396750 | 0.803971 | 2.702632e-49 | -8.615850e-47 |
| Msa0106370 | Msa1396750 | 0.814506 | 1.488237e-51 | -8.615850e-47 |
| Msa1354030 | Msa1396750 | 0.805977 | 1.028699e-49 | -8.615850e-47 |
| Msa1359080 | Msa1396750 | 0.801356 | 9.359293e-49 | -8.615850e-47 |
| Msa1367620 | Msa1396750 | 0.843388 | 1.445117e-58 | -8.615850e-47 |
| Msa1375260 | Msa1396750 | 0.840302 | 9.436238e-58 | -8.615850e-47 |
| Msa1391360 | Msa1396750 | 0.808314 | 3.290837e-50 | -8.615850e-47 |
| Msa1395230 | Msa1396750 | 0.856668 | 2.754457e-62 | -8.615850e-47 |
| Msa1396750 | Msa1401400 | 0.806277 | 8.895959e-50 | -8.615850e-47 |
| Msa1396750 | Msa1410430 | 0.883496 | 4.270212e-71 | -8.615850e-47 |
| Msa1396750 | Msa1418200 | -0.805045 | 1.613489e-49 | -8.615850e-47 |
| Msa1396750 | Msa1419800 | 0.810352 | 1.202848e-50 | -8.615850e-47 |
| Msa1396750 | Msa1442160 | 0.810551 | 1.089543e-50 | -8.615850e-47 |
| Msa1396750 | Msa1449250 | 0.811816 | 5.794627e-51 | -8.615850e-47 |
| Msa1396750 | Msa1453780 | 0.825939 | 3.565039e-54 | -8.615850e-47 |
| Msa1396750 | Msa1454910 | 0.824849 | 6.456898e-54 | -8.615850e-47 |
| Msa0605170 | Msa1396750 | -0.805694 | 1.179875e-49 | -8.615850e-47 |
| Msa0607340 | Msa1396750 | 0.838477 | 2.809563e-57 | -8.615850e-47 |
| Msa0607750 | Msa1396750 | 0.810919 | 9.072028e-51 | -8.615850e-47 |
| Msa0612870 | Msa1396750 | 0.816586 | 5.124873e-52 | -8.615850e-47 |
| Msa0621120 | Msa1396750 | -0.807322 | 5.349191e-50 | -8.615850e-47 |
| Msa0621720 | Msa1396750 | 0.802159 | 6.402017e-49 | -8.615850e-47 |
| Msa0625530 | Msa1396750 | 0.854200 | 1.441828e-61 | -8.615850e-47 |
| Msa0634510 | Msa1396750 | 0.843695 | 1.196139e-58 | -8.615850e-47 |
| Msa0646570 | Msa1396750 | -0.808195 | 3.490268e-50 | -8.615850e-47 |
| Msa0647450 | Msa1396750 | 0.811593 | 6.479166e-51 | -8.615850e-47 |
| Msa0659800 | Msa1396750 | 0.831393 | 1.712641e-55 | -8.615850e-47 |
| Msa0683060 | Msa1396750 | 0.823446 | 1.379482e-53 | -8.615850e-47 |
| Msa0694000 | Msa1396750 | 0.824407 | 8.210386e-54 | -8.615850e-47 |
| Msa0717920 | Msa1396750 | 0.949492 | 1.140700e-107 | -8.615850e-47 |
| Msa0725480 | Msa1396750 | 0.823923 | 1.066472e-53 | -8.615850e-47 |
| Msa0738630 | Msa1396750 | 0.827452 | 1.552500e-54 | -8.615850e-47 |
| Msa0766100 | Msa1396750 | 0.843094 | 1.730444e-58 | -8.615850e-47 |
| Msa0783760 | Msa1396750 | 0.829366 | 5.358326e-55 | -8.615850e-47 |
| Msa0813320 | Msa1396750 | 0.971133 | 1.096158e-132 | -8.615850e-47 |
| Msa0818980 | Msa1396750 | 0.824776 | 6.721412e-54 | -8.615850e-47 |
| Msa0819030 | Msa1396750 | 0.809721 | 1.644815e-50 | -8.615850e-47 |
| Msa0840610 | Msa1396750 | 0.817876 | 2.626438e-52 | -8.615850e-47 |
| Msa0129790 | Msa1396750 | 0.808773 | 2.626827e-50 | -8.615850e-47 |
| Msa0143140 | Msa1396750 | 0.821704 | 3.505270e-53 | -8.615850e-47 |
| Msa0163550 | Msa1396750 | -0.800293 | 1.542906e-48 | -8.615850e-47 |
| Msa0167210 | Msa1396750 | 0.819633 | 1.048221e-52 | -8.615850e-47 |
| Msa0173830 | Msa1396750 | -0.807069 | 6.051973e-50 | -8.615850e-47 |
| Msa0175320 | Msa1396750 | 0.816700 | 4.831188e-52 | -8.615850e-47 |
| Msa0183640 | Msa1396750 | 0.829272 | 5.648849e-55 | -8.615850e-47 |
| Msa0200950 | Msa1396750 | 0.807478 | 4.956434e-50 | -8.615850e-47 |
| Msa0216810 | Msa1396750 | 0.822905 | 1.844259e-53 | -8.615850e-47 |
| Msa0218530 | Msa1396750 | 0.806550 | 7.790555e-50 | -8.615850e-47 |
| Msa0227020 | Msa1396750 | 0.861168 | 1.240118e-63 | -8.615850e-47 |
| Msa0238070 | Msa1396750 | 0.872038 | 4.322248e-67 | -8.615850e-47 |
| Msa1253930 | Msa1396750 | 0.889713 | 1.892745e-73 | -8.615850e-47 |
| Msa1262310 | Msa1396750 | -0.805563 | 1.256977e-49 | -8.615850e-47 |
| Msa1265820 | Msa1396750 | 0.812069 | 5.103617e-51 | -8.615850e-47 |
| Msa1305520 | Msa1396750 | -0.814715 | 1.337798e-51 | -8.615850e-47 |
| Msa1307660 | Msa1396750 | 0.915381 | 6.299512e-85 | -8.615850e-47 |
| Msa1332140 | Msa1396750 | 0.827064 | 1.922888e-54 | -8.615850e-47 |
| Msa0376450 | Msa1396750 | 0.838821 | 2.289902e-57 | -8.615850e-47 |
| Msa0376510 | Msa1396750 | -0.810458 | 1.140985e-50 | -8.615850e-47 |
| Msa0425050 | Msa1396750 | -0.819081 | 1.400529e-52 | -8.615850e-47 |
| Msa0425120 | Msa1396750 | 0.829095 | 6.233423e-55 | -8.615850e-47 |
| Msa0428510 | Msa1396750 | 0.848728 | 5.094475e-60 | -8.615850e-47 |
| Msa0430620 | Msa1396750 | -0.839412 | 1.609671e-57 | -8.615850e-47 |
| Msa0463590 | Msa1396750 | 0.824949 | 6.115887e-54 | -8.615850e-47 |
| Msa0465790 | Msa1396750 | -0.800619 | 1.323542e-48 | -8.615850e-47 |
| Msa0471720 | Msa1396750 | 0.837832 | 4.117747e-57 | -8.615850e-47 |
| Msa0980500 | Msa1396750 | -0.817493 | 3.204712e-52 | -8.615850e-47 |
| Msa1007610 | Msa1396750 | 0.826439 | 2.710874e-54 | -8.615850e-47 |
| Msa1018020 | Msa1396750 | 0.839492 | 1.533909e-57 | -8.615850e-47 |
| Msa1038050 | Msa1396750 | -0.808644 | 2.798200e-50 | -8.615850e-47 |
| Msa1040110 | Msa1396750 | 0.810127 | 1.345323e-50 | -8.615850e-47 |
| Msa0258670 | Msa1396750 | 0.827119 | 1.865063e-54 | -8.615850e-47 |
| Msa0259860 | Msa1396750 | 0.891680 | 3.182958e-74 | -8.615850e-47 |
| Msa0260950 | Msa1396750 | 0.811569 | 6.557236e-51 | -8.615850e-47 |
| Msa0269740 | Msa1396750 | 0.808646 | 2.796505e-50 | -8.615850e-47 |
| Msa0293860 | Msa1396750 | 0.804041 | 2.612898e-49 | -8.615850e-47 |
| Msa0298940 | Msa1396750 | -0.838810 | 2.305049e-57 | -8.615850e-47 |
| Msa0298970 | Msa1396750 | -0.809204 | 2.124372e-50 | -8.615850e-47 |
| Msa0305340 | Msa1396750 | 0.843652 | 1.228104e-58 | -8.615850e-47 |
| Msa0315930 | Msa1396750 | 0.841101 | 5.829015e-58 | -8.615850e-47 |
| Msa0318250 | Msa1396750 | -0.849585 | 2.941604e-60 | -8.615850e-47 |
| Msa0318270 | Msa1396750 | -0.808529 | 2.962296e-50 | -8.615850e-47 |
| Msa0318310 | Msa1396750 | -0.806258 | 8.977856e-50 | -8.615850e-47 |
| Msa0341460 | Msa1396750 | 0.845297 | 4.433858e-59 | -8.615850e-47 |
| Msa1112000 | Msa1396750 | -0.846196 | 2.527563e-59 | -8.615850e-47 |
| Msa1129560 | Msa1396750 | -0.810948 | 8.943612e-51 | -8.615850e-47 |
| Msa1147980 | Msa1396750 | 0.819565 | 1.086364e-52 | -8.615850e-47 |
| Msa1157420 | Msa1396750 | 0.811451 | 6.954282e-51 | -8.615850e-47 |
| Msa1166140 | Msa1396750 | 0.842306 | 2.802912e-58 | -8.615850e-47 |
| Msa1166240 | Msa1396750 | 0.844068 | 9.504302e-59 | -8.615850e-47 |
| Msa1168680 | Msa1396750 | 0.817636 | 2.976118e-52 | -8.615850e-47 |
| Msa1168730 | Msa1396750 | 0.811734 | 6.037281e-51 | -8.615850e-47 |
| Msa1171690 | Msa1396750 | -0.804258 | 2.354920e-49 | -8.615850e-47 |
| Msa1200880 | Msa1396750 | 0.925407 | 1.912344e-90 | -8.615850e-47 |
| Msa1210770 | Msa1396750 | -0.800657 | 1.300467e-48 | -8.615850e-47 |
| Msa0516510 | Msa1396750 | 0.848758 | 4.997088e-60 | -8.615850e-47 |
| Msa0526640 | Msa1396750 | 0.834189 | 3.461458e-56 | -8.615850e-47 |
| Msa0546380 | Msa1396750 | -0.804182 | 2.442101e-49 | -8.615850e-47 |
| Msa0547460 | Msa1396750 | 0.819096 | 1.389822e-52 | -8.615850e-47 |
| Msa0549420 | Msa1396750 | 0.812498 | 4.112711e-51 | -8.615850e-47 |
| Msa0577940 | Msa1396750 | 0.857684 | 1.380296e-62 | -8.615850e-47 |
| Msa0598390 | Msa1396750 | 0.804167 | 2.459920e-49 | -8.615850e-47 |
| Msa0602210 | Msa1396750 | 0.821954 | 3.067028e-53 | -8.615850e-47 |
| Msa0602570 | Msa1396750 | 0.829107 | 6.194108e-55 | -8.615850e-47 |
| Msa0865990 | Msa1396750 | 0.845635 | 3.592106e-59 | -8.615850e-47 |
| Msa0867050 | Msa1396750 | 0.882481 | 1.004545e-70 | -8.615850e-47 |
| Msa0930320 | Msa1396750 | 0.859589 | 3.724510e-63 | -8.615850e-47 |
| Msa0967650 | Msa1396750 | 0.838227 | 3.260266e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1396750 | MtrunA17_Chr5g0406761 | 99.815 | 542 | 1 | 0 | 1 | 542 | 1 | 542 | 0.0 | 1079 |
| Msa1396750 | MtrunA17_Chr8g0370631 | 73.224 | 549 | 130 | 9 | 1 | 542 | 1 | 539 | 0.0 | 678 |
| Msa1396750 | MtrunA17_Chr8g0370621 | 35.333 | 300 | 153 | 11 | 143 | 434 | 3 | 269 | 3.06e-39 | 144 |
| Msa1396750 | MtrunA17_Chr7g0233271 | 34.921 | 126 | 76 | 3 | 313 | 434 | 12 | 135 | 1.89e-15 | 73.6 |
| Msa1396750 | MtrunA17_Chr6g0457721 | 38.532 | 109 | 52 | 3 | 212 | 320 | 25 | 118 | 5.05e-12 | 63.2 |
| Msa1396750 | MtrunA17_Chr1g0157381 | 35.514 | 107 | 67 | 2 | 17 | 123 | 24 | 128 | 6.90e-12 | 68.6 |
| Msa1396750 | MtrunA17_Chr8g0369711 | 48.387 | 62 | 28 | 1 | 20 | 81 | 36 | 93 | 2.01e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1396750 | AT2G17200.1 | 57.904 | 563 | 204 | 12 | 1 | 542 | 1 | 551 | 0.0 | 543 |
| Msa1396750 | AT2G17190.1 | 57.790 | 552 | 209 | 11 | 1 | 542 | 1 | 538 | 0.0 | 541 |
| Msa1396750 | AT5G42220.2 | 40.260 | 77 | 43 | 1 | 13 | 89 | 20 | 93 | 3.36e-12 | 69.7 |
| Msa1396750 | AT5G42220.1 | 40.260 | 77 | 43 | 1 | 13 | 89 | 20 | 93 | 3.36e-12 | 69.7 |
Find 208 sgRNAs with CRISPR-Local
Find 553 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTATTTCTCTCACTAAAT+TGG | 0.104754 | tig0022071:+10390 | None:intergenic |
| AAATGACAGTTCCAGAATTT+TGG | 0.122648 | tig0022071:-10065 | Msa1396750:CDS |
| GCTAATCTGAACGGAAAATT+TGG | 0.197973 | tig0022071:+11768 | None:intergenic |
| GGTGGTCTCAATAGTTTATT+TGG | 0.198870 | tig0022071:-10463 | Msa1396750:CDS |
| TCAACAACGCTTGATTTATA+AGG | 0.199192 | tig0022071:-11683 | Msa1396750:CDS |
| AGTGGAAGCGTGTGAAATTT+TGG | 0.241982 | tig0022071:+11961 | None:intergenic |
| CTTGGAGCTTCACTGTTTCC+AGG | 0.257067 | tig0022071:-10517 | Msa1396750:CDS |
| TTCAATCTATGATTAGTAAT+TGG | 0.265817 | tig0022071:+5627 | None:intergenic |
| CCCACAGATGCAAGAGCTTA+TGG | 0.281536 | tig0022071:-10302 | Msa1396750:CDS |
| TGCAGCGGTTGAGCGACTTT+TGG | 0.298639 | tig0022071:-6160 | Msa1396750:CDS |
| AAATTGGGATTTGACATAAA+TGG | 0.304375 | tig0022071:+10406 | None:intergenic |
| AACTAACCATTTGATCTGTT+TGG | 0.313503 | tig0022071:+6377 | None:intergenic |
| TCTCTCATTGAATTCATATC+AGG | 0.316390 | tig0022071:+9461 | None:intergenic |
| CAGGGAAAGAATTGATGTTT+TGG | 0.317779 | tig0022071:+12141 | None:intergenic |
| CCTAACCCTAGAAAATGATT+TGG | 0.330657 | tig0022071:+11931 | None:intergenic |
| ATTATTTCTCTCACTAAATT+GGG | 0.350981 | tig0022071:+10391 | None:intergenic |
| TTCCACCGTTGTTTCCTTCA+AGG | 0.355595 | tig0022071:-11740 | Msa1396750:CDS |
| TTAGGAAGTGGGTTAGTATT+GGG | 0.357261 | tig0022071:+9968 | None:intergenic |
| ATCATTTCACGCATGATCTC+AGG | 0.358686 | tig0022071:+10205 | None:intergenic |
| TCGAGCATGTTTGGTGGACT+TGG | 0.364106 | tig0022071:-6419 | Msa1396750:CDS |
| CTCAATAGTTTATTTGGAGC+AGG | 0.373769 | tig0022071:-10457 | Msa1396750:CDS |
| ACCTTGAGTCCCCAAAATTC+TGG | 0.374709 | tig0022071:+10054 | None:intergenic |
| GGCAGATCACACTGTCCATT+TGG | 0.376015 | tig0022071:-10659 | Msa1396750:CDS |
| GGTATCAATGGGATGGGAGG+AGG | 0.385738 | tig0022071:-10487 | Msa1396750:CDS |
| CCCAACATGCCTTCGAGATC+TGG | 0.386175 | tig0022071:+9694 | None:intergenic |
| TGGTCGATGGATTCCTCGTT+TGG | 0.386572 | tig0022071:+10029 | None:intergenic |
| CAACAACGCTTGATTTATAA+GGG | 0.388674 | tig0022071:-11682 | Msa1396750:CDS |
| ATTAGGAAGTGGGTTAGTAT+TGG | 0.396465 | tig0022071:+9967 | None:intergenic |
| ATCAATGGGATGGGAGGAGG+TGG | 0.398298 | tig0022071:-10484 | Msa1396750:CDS |
| TCTCTTGAAGCTGGGTAAGC+TGG | 0.399039 | tig0022071:+6244 | None:intergenic |
| CCCATGGCGGCGTCGGTGGG+AGG | 0.400436 | tig0022071:+11874 | None:intergenic |
| TGCTGGTGCTAATGAGGGTG+GGG | 0.401780 | tig0022071:-10557 | Msa1396750:CDS |
| GGAGCAGATGACCAAGGATT+AGG | 0.402983 | tig0022071:+9950 | None:intergenic |
| AGGGCTCTTATTGCTACATC+AGG | 0.403161 | tig0022071:-6192 | Msa1396750:CDS |
| AATACCTGATTCATTGTTTG+AGG | 0.403719 | tig0022071:+9589 | None:intergenic |
| TTGAGTATGTGTGCCAGCTC+AGG | 0.405526 | tig0022071:+10271 | None:intergenic |
| TTCTTGTAGCCTCAAGTGTC+TGG | 0.405809 | tig0022071:+10230 | None:intergenic |
| CTGATTCATTGTTTGAGGAT+TGG | 0.409445 | tig0022071:+9594 | None:intergenic |
| ACCTCCCATGGCGGCGTCGG+TGG | 0.410978 | tig0022071:+11870 | None:intergenic |
| CACACTGTCCATTTGGTTCG+TGG | 0.412105 | tig0022071:-10652 | Msa1396750:CDS |
| CAATCCTCAAACAATGAATC+AGG | 0.413237 | tig0022071:-9593 | Msa1396750:intron |
| CTAACCCTAGAAAATGATTT+GGG | 0.414485 | tig0022071:+11932 | None:intergenic |
| ATTAGCCCCACCAGTTGTAT+TGG | 0.419506 | tig0022071:+10618 | None:intergenic |
| CCCTCCCACCGACGCCGCCA+TGG | 0.423144 | tig0022071:-11875 | Msa1396750:exon |
| ACTTGCACATTTGCAAGTAT+TGG | 0.425069 | tig0022071:-5556 | Msa1396750:three_prime_UTR |
| AACGGAAAATTTGGAACCAT+TGG | 0.427274 | tig0022071:+11777 | None:intergenic |
| CTGAGCAATAACATCCTTGA+AGG | 0.430527 | tig0022071:+11726 | None:intergenic |
| TAGAAGGTTGCGCACTATCT+CGG | 0.430838 | tig0022071:+10333 | None:intergenic |
| GGATTAGGAGGACCTGGACT+TGG | 0.430913 | tig0022071:-10535 | Msa1396750:CDS |
| TGCTGCAATTGTTCAAGATC+TGG | 0.431718 | tig0022071:+10430 | None:intergenic |
| TTATAAGGGAAGGATTCTTA+AGG | 0.440217 | tig0022071:-11668 | Msa1396750:CDS |
| TGCAGGGAACCAGGTCAAAC+AGG | 0.442720 | tig0022071:-7611 | Msa1396750:intron |
| CCCACTGGCTTAGGCGGGCT+TGG | 0.445121 | tig0022071:-9721 | Msa1396750:CDS |
| CCAGATCTCGAAGGCATGTT+GGG | 0.445288 | tig0022071:-9694 | Msa1396750:CDS |
| CCAGGGCTAGGAGGTATCAA+TGG | 0.448035 | tig0022071:-10499 | Msa1396750:CDS |
| GGGAAACTCTGGACAGTAGC+AGG | 0.452141 | tig0022071:-6139 | Msa1396750:intron |
| TCCATAAGCTCTTGCATCTG+TGG | 0.453729 | tig0022071:+10301 | None:intergenic |
| AGAAGGTTGCGCACTATCTC+GGG | 0.456339 | tig0022071:+10334 | None:intergenic |
| TTTACGCCTGCCAATACAAC+TGG | 0.458558 | tig0022071:-10628 | Msa1396750:CDS |
| TGGGTCAATGAACCAGCATC+TGG | 0.462855 | tig0022071:+9664 | None:intergenic |
| GCTTCACTGTTTCCAGGGCT+AGG | 0.463140 | tig0022071:-10511 | Msa1396750:CDS |
| GAGATGTTATCGAGCATGTT+TGG | 0.463587 | tig0022071:-6428 | Msa1396750:CDS |
| GCCCCACCAGTTGTATTGGC+AGG | 0.463998 | tig0022071:+10622 | None:intergenic |
| AGAATCCCATCTCTTGAAGC+TGG | 0.468360 | tig0022071:+6235 | None:intergenic |
| ACCAAGCCCGCCTAAGCCAG+TGG | 0.470102 | tig0022071:+9720 | None:intergenic |
| GCTGTTCCAAACAGATCAAA+TGG | 0.470657 | tig0022071:-6383 | Msa1396750:intron |
| CAATTCTTTCCCTGCGTAGG+TGG | 0.473169 | tig0022071:-12132 | Msa1396750:five_prime_UTR |
| AATGGGATGGGAGGAGGTGG+TGG | 0.473681 | tig0022071:-10481 | Msa1396750:CDS |
| TTAAATGCCACCACAATGGC+AGG | 0.474034 | tig0022071:-10088 | Msa1396750:CDS |
| AGCATTAGTAGTTGAGGGAT+TGG | 0.475466 | tig0022071:+10009 | None:intergenic |
| ATGATTAGTAATTGGAGTGT+TGG | 0.475784 | tig0022071:+5635 | None:intergenic |
| AAATGATTTGGGAATGAAAG+TGG | 0.475964 | tig0022071:+11943 | None:intergenic |
| TGCTGATTTGGCAGGTGGGA+AGG | 0.477502 | tig0022071:-5786 | Msa1396750:intron |
| TCTGCCTACCTGCATTGTCT+CGG | 0.479867 | tig0022071:+9397 | None:intergenic |
| ATCAACATTCGTTGTTCCAA+TGG | 0.480822 | tig0022071:-11793 | Msa1396750:CDS |
| CCATGGCGGCGTCGGTGGGA+GGG | 0.481134 | tig0022071:+11875 | None:intergenic |
| CCTCCCATGGCGGCGTCGGT+GGG | 0.482662 | tig0022071:+11871 | None:intergenic |
| CTAACCCACTTCCTAATCCT+TGG | 0.484228 | tig0022071:-9961 | Msa1396750:CDS |
| GCTTCAGCATTAGTAGTTGA+GGG | 0.484794 | tig0022071:+10004 | None:intergenic |
| CTCTTGAAGCTGGGTAAGCT+GGG | 0.484867 | tig0022071:+6245 | None:intergenic |
| AGCGGTTGCGTCACCTCCCA+TGG | 0.486145 | tig0022071:+11858 | None:intergenic |
| CAAGCTCTTATGACTCAACT+TGG | 0.487980 | tig0022071:-8699 | Msa1396750:CDS |
| TCTGTGGGTTACTCATTAGA+AGG | 0.488987 | tig0022071:+10317 | None:intergenic |
| CTGCCTACCTGCATTGTCTC+GGG | 0.489553 | tig0022071:+9398 | None:intergenic |
| CTTACCCAGCTTCAAGAGAT+GGG | 0.490256 | tig0022071:-6240 | Msa1396750:CDS |
| TGCATCATTTGAGAAATAGC+TGG | 0.490319 | tig0022071:+9628 | None:intergenic |
| TGCTTCAGCATTAGTAGTTG+AGG | 0.492949 | tig0022071:+10003 | None:intergenic |
| ATGTTTGGTGGACTTGGAGC+TGG | 0.493489 | tig0022071:-6413 | Msa1396750:CDS |
| CCTCCCACCGACGCCGCCAT+GGG | 0.497016 | tig0022071:-11874 | Msa1396750:exon |
| GCTTACCCAGCTTCAAGAGA+TGG | 0.498517 | tig0022071:-6241 | Msa1396750:CDS |
| TGAGTATGTGTGCCAGCTCA+GGG | 0.501629 | tig0022071:+10272 | None:intergenic |
| AGGGAAATTGAAGGTAGTTA+CGG | 0.502652 | tig0022071:+11894 | None:intergenic |
| AGTGTCTGGCGAAGTGTGCT+AGG | 0.502999 | tig0022071:+10244 | None:intergenic |
| GGATTTATTTATAGGTTTGG+AGG | 0.505260 | tig0022071:-10680 | Msa1396750:intron |
| TGGGTAGCATACAATGTCTC+TGG | 0.506004 | tig0022071:+6264 | None:intergenic |
| TTGGAGCTTCACTGTTTCCA+GGG | 0.506774 | tig0022071:-10516 | Msa1396750:CDS |
| CAGACACCCACTGGCTTAGG+CGG | 0.506784 | tig0022071:-9727 | Msa1396750:CDS |
| CTCAAGATACACTAAAAGAA+GGG | 0.507902 | tig0022071:-5532 | Msa1396750:three_prime_UTR |
| GTCACCTCCCATGGCGGCGT+CGG | 0.508624 | tig0022071:+11867 | None:intergenic |
| AGTGGGTTAGTATTGGGTAC+AGG | 0.509548 | tig0022071:+9974 | None:intergenic |
| AACAGTGAAGCTCCAAGTCC+AGG | 0.510685 | tig0022071:+10523 | None:intergenic |
| TACGCTTTGTGCAGGGAACC+AGG | 0.510996 | tig0022071:-7620 | Msa1396750:intron |
| GCGTAAAGCCACGAACCAAA+TGG | 0.512523 | tig0022071:+10644 | None:intergenic |
| ATTGAAGGTAGTTACGGTTG+TGG | 0.513087 | tig0022071:+11900 | None:intergenic |
| CTCAGCATGTTAAACCCCTC+AGG | 0.513221 | tig0022071:+10142 | None:intergenic |
| AACGCTTGATTTATAAGGGA+AGG | 0.514145 | tig0022071:-11678 | Msa1396750:CDS |
| CCTCAAGATACACTAAAAGA+AGG | 0.515865 | tig0022071:-5533 | Msa1396750:three_prime_UTR |
| CAGCAGACACCCACTGGCTT+AGG | 0.516870 | tig0022071:-9730 | Msa1396750:CDS |
| ATACACGTATTTGATACAAA+AGG | 0.517494 | tig0022071:+5587 | None:intergenic |
| TAGAGCTGCTGGTGCTAATG+AGG | 0.518541 | tig0022071:-10563 | Msa1396750:CDS |
| GCTCGGCAGCAGACACCCAC+TGG | 0.522368 | tig0022071:-9736 | Msa1396750:CDS |
| GTAGTTGAGGGATTGGTCGA+TGG | 0.525383 | tig0022071:+10016 | None:intergenic |
| AGCATTAGTAGTGGTCGTAT+TGG | 0.525818 | tig0022071:+10585 | None:intergenic |
| GCTGATTTGGCAGGTGGGAA+GGG | 0.527174 | tig0022071:-5785 | Msa1396750:intron |
| GTGCCTCCACCTGTTTGACC+TGG | 0.527581 | tig0022071:+7602 | None:intergenic |
| GGTCAAACAGGTGGAGGCAC+TGG | 0.529335 | tig0022071:-7599 | Msa1396750:intron |
| GATGACCAAGGATTAGGAAG+TGG | 0.532555 | tig0022071:+9956 | None:intergenic |
| ACTCCTCCGTCGGTGGATTG+TGG | 0.533890 | tig0022071:+11820 | None:intergenic |
| CGCCTGCCAATACAACTGGT+GGG | 0.535436 | tig0022071:-10624 | Msa1396750:CDS |
| GAAAACATTCGAAGAAACTC+CGG | 0.535915 | tig0022071:+9425 | None:intergenic |
| AGTAGGACCAGTGAACAACT+TGG | 0.536856 | tig0022071:-6456 | Msa1396750:intron |
| AGACACCCACTGGCTTAGGC+GGG | 0.538568 | tig0022071:-9726 | Msa1396750:CDS |
| TTGGGTGGTATGCCAGATGC+TGG | 0.539154 | tig0022071:-9676 | Msa1396750:CDS |
| TCCAACCCCAAGTTGTTCAC+TGG | 0.539588 | tig0022071:+6449 | None:intergenic |
| TTGACACGCAAGAGAACTTG+AGG | 0.542106 | tig0022071:-6212 | Msa1396750:CDS |
| AAAACATTCGAAGAAACTCC+GGG | 0.542137 | tig0022071:+9426 | None:intergenic |
| GCTGCTGGTGCTAATGAGGG+TGG | 0.544007 | tig0022071:-10559 | Msa1396750:CDS |
| TACCTGCATTGTCTCGGGTG+AGG | 0.546530 | tig0022071:+9403 | None:intergenic |
| CAGGGCTAGGAGGTATCAAT+GGG | 0.546608 | tig0022071:-10498 | Msa1396750:CDS |
| AACATTGAATCTTCTCCTGA+GGG | 0.546959 | tig0022071:-10157 | Msa1396750:CDS |
| CACCTACTGCTGCAGATGCT+CGG | 0.551684 | tig0022071:-9753 | Msa1396750:CDS |
| CCATAAGCTCTTGCATCTGT+GGG | 0.553739 | tig0022071:+10302 | None:intergenic |
| TCAATAGTTTATTTGGAGCA+GGG | 0.554171 | tig0022071:-10456 | Msa1396750:CDS |
| GATCAAACGCTTCAAAGCTA+TGG | 0.555162 | tig0022071:-11643 | Msa1396750:intron |
| CTGCTGGTGCTAATGAGGGT+GGG | 0.555245 | tig0022071:-10558 | Msa1396750:CDS |
| AATTCTTTCCCTGCGTAGGT+GGG | 0.555936 | tig0022071:-12131 | Msa1396750:five_prime_UTR |
| TTCCTCACCCGAGACAATGC+AGG | 0.556082 | tig0022071:-9405 | Msa1396750:intron |
| GTAGGACCAGTGAACAACTT+GGG | 0.556227 | tig0022071:-6455 | Msa1396750:intron |
| TGACACGCAAGAGAACTTGA+GGG | 0.556470 | tig0022071:-6211 | Msa1396750:CDS |
| GCCAGATCTCGAAGGCATGT+TGG | 0.556478 | tig0022071:-9695 | Msa1396750:CDS |
| GAGAGAAGTGATGCAAAACC+CGG | 0.556701 | tig0022071:-9444 | Msa1396750:CDS |
| ACCAGTGAACAACTTGGGGT+TGG | 0.558830 | tig0022071:-6450 | Msa1396750:CDS |
| GATCTTAACTCCTCCGTCGG+TGG | 0.560218 | tig0022071:+11813 | None:intergenic |
| GAGGTGCCCACACTAATGTC+AGG | 0.561658 | tig0022071:-9783 | Msa1396750:CDS |
| CCATTGATACCTCCTAGCCC+TGG | 0.562542 | tig0022071:+10499 | None:intergenic |
| GTGGGTTAGTATTGGGTACA+GGG | 0.562575 | tig0022071:+9975 | None:intergenic |
| ACTACTAATGCTAGAGCTGC+TGG | 0.562735 | tig0022071:-10574 | Msa1396750:CDS |
| ACGCCTGCCAATACAACTGG+TGG | 0.564551 | tig0022071:-10625 | Msa1396750:CDS |
| GTCATTTCCTGCCATTGTGG+TGG | 0.564771 | tig0022071:+10081 | None:intergenic |
| TCATTTCACGCATGATCTCA+GGG | 0.568168 | tig0022071:+10206 | None:intergenic |
| ACTGGTGGGGCTAATACCAC+TGG | 0.571914 | tig0022071:-10610 | Msa1396750:CDS |
| TTGATCTCCTGACATTAGTG+TGG | 0.573945 | tig0022071:+9776 | None:intergenic |
| GCTAGGAGGTATCAATGGGA+TGG | 0.575239 | tig0022071:-10494 | Msa1396750:CDS |
| AGAGCTGCTGGTGCTAATGA+GGG | 0.575248 | tig0022071:-10562 | Msa1396750:CDS |
| ATGTTATCGAGCATGTTTGG+TGG | 0.578304 | tig0022071:-6425 | Msa1396750:CDS |
| AGAGACTAACCCACCTACGC+AGG | 0.578621 | tig0022071:+12122 | None:intergenic |
| GAATCCCATCTCTTGAAGCT+GGG | 0.579933 | tig0022071:+6236 | None:intergenic |
| GTTGATCTTAACTCCTCCGT+CGG | 0.580267 | tig0022071:+11810 | None:intergenic |
| CTGAGGGGTTTAACATGCTG+AGG | 0.586446 | tig0022071:-10141 | Msa1396750:CDS |
| CCCACCGACGCCGCCATGGG+AGG | 0.587131 | tig0022071:-11871 | Msa1396750:exon |
| CAACATTGAATCTTCTCCTG+AGG | 0.588430 | tig0022071:-10158 | Msa1396750:CDS |
| GTCGGTGGGAGGGAAATTGA+AGG | 0.589597 | tig0022071:+11885 | None:intergenic |
| CTAGGAGGTATCAATGGGAT+GGG | 0.592010 | tig0022071:-10493 | Msa1396750:CDS |
| CATCAATTCTTTCCCTGCGT+AGG | 0.592147 | tig0022071:-12135 | Msa1396750:five_prime_UTR |
| TATGGATAGAAACCCTGAGC+TGG | 0.593562 | tig0022071:-10284 | Msa1396750:CDS |
| GGAGGTATCAATGGGATGGG+AGG | 0.595186 | tig0022071:-10490 | Msa1396750:CDS |
| GCTGGTGCTAATGAGGGTGG+GGG | 0.597072 | tig0022071:-10556 | Msa1396750:CDS |
| ATGACCAAGGATTAGGAAGT+GGG | 0.597740 | tig0022071:+9957 | None:intergenic |
| TGCCGAGCATCTGCAGCAGT+AGG | 0.598212 | tig0022071:+9751 | None:intergenic |
| TTGATCTGTTTGGAACAGCT+AGG | 0.600073 | tig0022071:+6387 | None:intergenic |
| TGCAATTGTTCAAGATCTGG+AGG | 0.600252 | tig0022071:+10433 | None:intergenic |
| GAACCAGGTCAAACAGGTGG+AGG | 0.613496 | tig0022071:-7605 | Msa1396750:CDS |
| TCACTGTTTCCAGGGCTAGG+AGG | 0.618323 | tig0022071:-10508 | Msa1396750:CDS |
| TGGCTCCGTGGTGGTTTCAG+CGG | 0.619877 | tig0022071:+11840 | None:intergenic |
| GGGCTCTTATTGCTACATCA+GGG | 0.622331 | tig0022071:-6191 | Msa1396750:CDS |
| GGACTCAAGGTGGCCAAACG+AGG | 0.622656 | tig0022071:-10042 | Msa1396750:CDS |
| TAGGACCAGTGAACAACTTG+GGG | 0.623179 | tig0022071:-6454 | Msa1396750:CDS |
| ACTGTCATTTCCTGCCATTG+TGG | 0.626018 | tig0022071:+10078 | None:intergenic |
| AGGAAACAACGGTGGAATCG+AGG | 0.627185 | tig0022071:+11746 | None:intergenic |
| CACACTTCGCCAGACACTTG+AGG | 0.628666 | tig0022071:-10239 | Msa1396750:CDS |
| GCCTGCCAATACAACTGGTG+GGG | 0.630823 | tig0022071:-10623 | Msa1396750:CDS |
| AAATCCCAAACGCTAAAATG+TGG | 0.630963 | tig0022071:-5743 | Msa1396750:three_prime_UTR |
| ATCAGGGAATGTTCATGCAG+CGG | 0.635372 | tig0022071:-6175 | Msa1396750:CDS |
| ACGGAGCCACAATCCACCGA+CGG | 0.636141 | tig0022071:-11826 | Msa1396750:CDS |
| GATCTCGAAGGCATGTTGGG+TGG | 0.636292 | tig0022071:-9691 | Msa1396750:CDS |
| TGATCTCCTGACATTAGTGT+GGG | 0.636569 | tig0022071:+9777 | None:intergenic |
| CCAAGCCCGCCTAAGCCAGT+GGG | 0.642471 | tig0022071:+9721 | None:intergenic |
| AGTGGTCGTATTGGCACCAG+TGG | 0.643075 | tig0022071:+10594 | None:intergenic |
| TCAAGATACACTAAAAGAAG+GGG | 0.646567 | tig0022071:-5531 | Msa1396750:three_prime_UTR |
| CTTGGTATGCCAGATCTCGA+AGG | 0.651574 | tig0022071:-9703 | Msa1396750:CDS |
| GAGACTAACCCACCTACGCA+GGG | 0.653926 | tig0022071:+12123 | None:intergenic |
| GGAATCGAGGCTAATCTGAA+CGG | 0.654752 | tig0022071:+11759 | None:intergenic |
| AGCAGCTCTAGCATTAGTAG+TGG | 0.657872 | tig0022071:+10576 | None:intergenic |
| AACATCCTTGAAGGAAACAA+CGG | 0.660672 | tig0022071:+11735 | None:intergenic |
| ACATTGAATCTTCTCCTGAG+GGG | 0.662571 | tig0022071:-10156 | Msa1396750:CDS |
| GTAGCATACAATGTCTCTGG+AGG | 0.664986 | tig0022071:+6267 | None:intergenic |
| TGGGTTAGTATTGGGTACAG+GGG | 0.669270 | tig0022071:+9976 | None:intergenic |
| TTACTTGGAGCAGATGACCA+AGG | 0.670590 | tig0022071:+9944 | None:intergenic |
| AGATCATGCGTGAAATGATG+AGG | 0.680701 | tig0022071:-10201 | Msa1396750:CDS |
| ATCCTTGAAGGAAACAACGG+TGG | 0.687823 | tig0022071:+11738 | None:intergenic |
| GGTGGATTGTGGCTCCGTGG+TGG | 0.692838 | tig0022071:+11831 | None:intergenic |
| GTATGAATACTGATCAGCGT+GGG | 0.693610 | tig0022071:-9487 | Msa1396750:CDS |
| GAGCCACAATCCACCGACGG+AGG | 0.705954 | tig0022071:-11823 | Msa1396750:CDS |
| AGGGAACCAGGTCAAACAGG+TGG | 0.708080 | tig0022071:-7608 | Msa1396750:CDS |
| GTCGGTGGATTGTGGCTCCG+TGG | 0.709596 | tig0022071:+11828 | None:intergenic |
| GGTATGAATACTGATCAGCG+TGG | 0.717241 | tig0022071:-9488 | Msa1396750:CDS |
| CGCAACCGCTGAAACCACCA+CGG | 0.722380 | tig0022071:-11845 | Msa1396750:CDS |
| GGTTGCGTCACCTCCCATGG+CGG | 0.723588 | tig0022071:+11861 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTATAATAATTTTTTTTTT+TGG | - | tig0022071:11098-11117 | Msa1396750:intron | 0.0% |
| !!! | ATAATATTATAATTTTTATA+AGG | - | tig0022071:12150-12169 | Msa1396750:five_prime_UTR | 0.0% |
| !!! | TTATTTTCTCAAATTATTAT+TGG | - | tig0022071:6406-6425 | Msa1396750:CDS | 10.0% |
| !!! | ATATAATTTTCTTTTGTATT+TGG | - | tig0022071:6900-6919 | Msa1396750:intron | 10.0% |
| !! | TTAATTTATTTAGTATATCT+AGG | + | tig0022071:8840-8859 | None:intergenic | 10.0% |
| !! | TGTTAAAAAGAAAATAATAA+AGG | - | tig0022071:9141-9160 | Msa1396750:intron | 10.0% |
| !! | GTTAAAAAGAAAATAATAAA+GGG | - | tig0022071:9142-9161 | Msa1396750:intron | 10.0% |
| !! | TTAAAAAGAAAATAATAAAG+GGG | - | tig0022071:9143-9162 | Msa1396750:intron | 10.0% |
| !! | ATATAATTTCCAAATTATAA+TGG | - | tig0022071:11581-11600 | Msa1396750:intron | 10.0% |
| !! | AAAATATATTAATACATGAA+CGG | + | tig0022071:11756-11775 | None:intergenic | 10.0% |
| !!! | TCATGTATTAATATATTTTT+TGG | - | tig0022071:11757-11776 | Msa1396750:CDS | 10.0% |
| !! | TATATAAATAATTGGAAGAT+CGG | + | tig0022071:5991-6010 | None:intergenic | 15.0% |
| !! | CGAACAAATATATAAATAAT+TGG | + | tig0022071:5999-6018 | None:intergenic | 15.0% |
| !! | CATTGAATAATTTATGTATT+TGG | + | tig0022071:6235-6254 | None:intergenic | 15.0% |
| !! | ATATAATAAAAACATAGACA+CGG | + | tig0022071:6463-6482 | None:intergenic | 15.0% |
| !! | AAAATAATAATTAATAGTGG+TGG | - | tig0022071:6785-6804 | Msa1396750:intron | 15.0% |
| !! | AAATAATAATTAATAGTGGT+GGG | - | tig0022071:6786-6805 | Msa1396750:intron | 15.0% |
| !! | TTGTATTTGGATTTATTTAT+AGG | - | tig0022071:6913-6932 | Msa1396750:intron | 15.0% |
| !!! | ATTATTTAATAGATTTTGCA+TGG | + | tig0022071:7247-7266 | None:intergenic | 15.0% |
| !! | TTTATCATAATAAAGCAAAT+CGG | + | tig0022071:8798-8817 | None:intergenic | 15.0% |
| !! | AATATTAATGATTGAATGTT+AGG | + | tig0022071:8963-8982 | None:intergenic | 15.0% |
| !! | ACAATAATTCAAATTTAGAT+TGG | + | tig0022071:10144-10163 | None:intergenic | 15.0% |
| !! | ATTTGAATGATGTATTTATA+AGG | - | tig0022071:10649-10668 | Msa1396750:CDS | 15.0% |
| !! | TTAAAAAAAAAAAGCAGTAT+TGG | + | tig0022071:10958-10977 | None:intergenic | 15.0% |
| !! | ATATAAATAATTGGAAGATC+GGG | + | tig0022071:5990-6009 | None:intergenic | 20.0% |
| !! | CATTGAATAACTTATGTATT+TGG | - | tig0022071:6196-6215 | Msa1396750:CDS | 20.0% |
| !!! | GCTTTAAACACTATTTTATT+TGG | - | tig0022071:6567-6586 | Msa1396750:intron | 20.0% |
| !!! | ACTATTTTATTTGGATGTAA+AGG | - | tig0022071:6576-6595 | Msa1396750:intron | 20.0% |
| !!! | CTATTTTATTTGGATGTAAA+GGG | - | tig0022071:6577-6596 | Msa1396750:intron | 20.0% |
| !! | TCTCCATTTATCAAAATAAA+TGG | + | tig0022071:6839-6858 | None:intergenic | 20.0% |
| !!! | ATTTATTTTGATAAATGGAG+AGG | - | tig0022071:6838-6857 | Msa1396750:intron | 20.0% |
| !! | TTTGGATTTATTTATAGGTT+TGG | - | tig0022071:6918-6937 | Msa1396750:intron | 20.0% |
| !!! | ATTATTTCTCTCACTAAATT+GGG | + | tig0022071:7213-7232 | None:intergenic | 20.0% |
| !! | ATGAAAAAATCATACTTACT+TGG | + | tig0022071:7675-7694 | None:intergenic | 20.0% |
| !! | TTAACCTATTAATAAGTTTG+TGG | - | tig0022071:8298-8317 | Msa1396750:intron | 20.0% |
| !! | GATAAATTGTATGAGTAATA+AGG | - | tig0022071:8417-8436 | Msa1396750:intron | 20.0% |
| !!! | GATAGCAAATTTTTGAATAA+CGG | - | tig0022071:8645-8664 | Msa1396750:intron | 20.0% |
| !!! | AAAAAAAATGTAGGCATTTT+GGG | - | tig0022071:9214-9233 | Msa1396750:intron | 20.0% |
| !!! | TTTTGGTTATAGCTTTTTTT+TGG | - | tig0022071:9471-9490 | Msa1396750:CDS | 20.0% |
| !! | TAAGTAAAGATGTACAATTT+GGG | - | tig0022071:9609-9628 | Msa1396750:CDS | 20.0% |
| !!! | TATTGTGAATTATAACGTTT+TGG | - | tig0022071:10158-10177 | Msa1396750:CDS | 20.0% |
| !! | ACATCATTCAAATATAATTG+AGG | + | tig0022071:10642-10661 | None:intergenic | 20.0% |
| !!! | TTAAATTTGTTTCTGTTAGT+AGG | - | tig0022071:11128-11147 | Msa1396750:intron | 20.0% |
| !!! | ATTATTTAGAATAGTAATGC+AGG | + | tig0022071:11279-11298 | None:intergenic | 20.0% |
| !! | TTATATTTAAATGCCAAACA+AGG | + | tig0022071:11567-11586 | None:intergenic | 20.0% |
| !!! | TTACTTTTGATTTTCGTTAT+CGG | - | tig0022071:11900-11919 | Msa1396750:five_prime_UTR | 20.0% |
| !! | TTCAATCTATGATTAGTAAT+TGG | + | tig0022071:11977-11996 | None:intergenic | 20.0% |
| !! | GATAAACTGAGAAATTTTGA+CGG | + | tig0022071:5586-5605 | None:intergenic | 25.0% |
| !!! | TTATCATTTTTCGTGCTTTT+TGG | - | tig0022071:6120-6139 | Msa1396750:intron | 25.0% |
| !! | GTCAATTGTTTCTTGTAAAT+AGG | + | tig0022071:6166-6185 | None:intergenic | 25.0% |
| ! | GTCAAATGTTTCTTGTAAAA+AGG | - | tig0022071:6265-6284 | Msa1396750:CDS | 25.0% |
| !!! | ATTGTTTATTTTATGCTGTC+AGG | - | tig0022071:6644-6663 | Msa1396750:intron | 25.0% |
| ! | TTGTTCATATGGAAATTCTT+TGG | - | tig0022071:6674-6693 | Msa1396750:intron | 25.0% |
| ! | ATACCATTTAGAGATATAGT+GGG | + | tig0022071:6813-6832 | None:intergenic | 25.0% |
| ! | CCATTTATCAAAATAAATGG+AGG | + | tig0022071:6836-6855 | None:intergenic | 25.0% |
| !!! | CCTCCATTTATTTTGATAAA+TGG | - | tig0022071:6833-6852 | Msa1396750:intron | 25.0% |
| ! | AAATTGGGATTTGACATAAA+TGG | + | tig0022071:7198-7217 | None:intergenic | 25.0% |
| !! | CATTATTTCTCTCACTAAAT+TGG | + | tig0022071:7214-7233 | None:intergenic | 25.0% |
| !!! | CTTGGTTTATTTTAGATTCT+TGG | - | tig0022071:8092-8111 | Msa1396750:intron | 25.0% |
| !!! | GTTGATGAATTTTAGCTAAT+AGG | - | tig0022071:8245-8264 | Msa1396750:intron | 25.0% |
| !! | TTTAATCGTACACTCATTTT+AGG | - | tig0022071:8336-8355 | Msa1396750:intron | 25.0% |
| !!! | TATTTTCACTTTTGTTTCTC+CGG | - | tig0022071:8388-8407 | Msa1396750:intron | 25.0% |
| ! | TAATCATATGCTATGAAACA+TGG | - | tig0022071:9052-9071 | Msa1396750:intron | 25.0% |
| !! | GAAAAAAAATGTAGGCATTT+TGG | - | tig0022071:9213-9232 | Msa1396750:intron | 25.0% |
| ! | TGGTCATCTATGTATATATA+TGG | - | tig0022071:9332-9351 | Msa1396750:intron | 25.0% |
| ! | AAAGCTATAACCAAAAAAAG+AGG | + | tig0022071:9467-9486 | None:intergenic | 25.0% |
| !!! | CAGATGCTAAAACAATTTTT+TGG | - | tig0022071:9540-9559 | Msa1396750:intron | 25.0% |
| ! | TAATAAAACACACACTTTCA+AGG | + | tig0022071:9583-9602 | None:intergenic | 25.0% |
| ! | CTAAGTAAAGATGTACAATT+TGG | - | tig0022071:9608-9627 | Msa1396750:CDS | 25.0% |
| !!! | TTTTGTTTACTATTTGCTAC+TGG | - | tig0022071:9940-9959 | Msa1396750:intron | 25.0% |
| !! | GACAATTTTGCATTCATTTA+TGG | - | tig0022071:10032-10051 | Msa1396750:CDS | 25.0% |
| !!! | ATTATAACGTTTTGGATCAA+TGG | - | tig0022071:10166-10185 | Msa1396750:CDS | 25.0% |
| ! | TTGAAAATTTGTCTACTATG+AGG | - | tig0022071:10244-10263 | Msa1396750:CDS | 25.0% |
| !! | TCTTAGCTAAGTCTTTTATT+AGG | - | tig0022071:10279-10298 | Msa1396750:CDS | 25.0% |
| !!! | ATAAATCATATAGGTTGATC+TGG | - | tig0022071:10308-10327 | Msa1396750:CDS | 25.0% |
| !!! | TAAATCATATAGGTTGATCT+GGG | - | tig0022071:10309-10328 | Msa1396750:CDS | 25.0% |
| ! | AGCTTAAATTTGGTTAGAAA+CGG | + | tig0022071:10377-10396 | None:intergenic | 25.0% |
| ! | AATGGTTTCACATGTATAAA+TGG | + | tig0022071:10423-10442 | None:intergenic | 25.0% |
| ! | TTAGTATGTTATACATGTAG+AGG | - | tig0022071:10547-10566 | Msa1396750:CDS | 25.0% |
| ! | TGAATGATGTATTTATAAGG+TGG | - | tig0022071:10652-10671 | Msa1396750:CDS | 25.0% |
| ! | AAGTAAACCCTAAAAAAAGA+TGG | + | tig0022071:10735-10754 | None:intergenic | 25.0% |
| !! | AAAAAAAAAAGCAGTATTGG+TGG | + | tig0022071:10955-10974 | None:intergenic | 25.0% |
| !!! | ATTTTTTAATGTGCAACCAA+TGG | + | tig0022071:11080-11099 | None:intergenic | 25.0% |
| ! | CGGTCTTAAAATATAATTTC+AGG | + | tig0022071:11736-11755 | None:intergenic | 25.0% |
| ! | ATACACGTATTTGATACAAA+AGG | + | tig0022071:12017-12036 | None:intergenic | 25.0% |
| ! | AAATGATTTGGGAATGAAAG+TGG | + | tig0022071:5661-5680 | None:intergenic | 30.0% |
| ! | TCATTCCCAAATCATTTTCT+AGG | - | tig0022071:5664-5683 | Msa1396750:three_prime_UTR | 30.0% |
| ! | CATTCCCAAATCATTTTCTA+GGG | - | tig0022071:5665-5684 | Msa1396750:three_prime_UTR | 30.0% |
| CTAACCCTAGAAAATGATTT+GGG | + | tig0022071:5672-5691 | None:intergenic | 30.0% | |
| !!! | CAAATCATTTTCTAGGGTTA+GGG | - | tig0022071:5671-5690 | Msa1396750:three_prime_UTR | 30.0% |
| TCAACAACGCTTGATTTATA+AGG | - | tig0022071:5918-5937 | Msa1396750:intron | 30.0% | |
| CAACAACGCTTGATTTATAA+GGG | - | tig0022071:5919-5938 | Msa1396750:intron | 30.0% | |
| TTATAAGGGAAGGATTCTTA+AGG | - | tig0022071:5933-5952 | Msa1396750:intron | 30.0% | |
| ! | TTGTTTCTTGTAAATAGGAC+CGG | + | tig0022071:6161-6180 | None:intergenic | 30.0% |
| ATGTTTCTTGTAAAAAGGAC+AGG | - | tig0022071:6270-6289 | Msa1396750:CDS | 30.0% | |
| AGATAAATTAATACTCCCTC+CGG | + | tig0022071:6297-6316 | None:intergenic | 30.0% | |
| TCCAGTATTTGCATTTGTAT+GGG | - | tig0022071:6493-6512 | Msa1396750:intron | 30.0% | |
| ! | GTATGGGTTAACAATAACAT+AGG | - | tig0022071:6509-6528 | Msa1396750:intron | 30.0% |
| ATGAATTTGTCGACAATCAA+TGG | - | tig0022071:6532-6551 | Msa1396750:intron | 30.0% | |
| !! | CAGGAATTGATTTGTTCATA+TGG | - | tig0022071:6663-6682 | Msa1396750:intron | 30.0% |
| !! | AAATTCTTTGGTGTTTCAGA+GGG | - | tig0022071:6686-6705 | Msa1396750:intron | 30.0% |
| CTCTCTCTAAATAGAAGAAA+TGG | + | tig0022071:6741-6760 | None:intergenic | 30.0% | |
| GATACCATTTAGAGATATAG+TGG | + | tig0022071:6814-6833 | None:intergenic | 30.0% | |
| GGATTTATTTATAGGTTTGG+AGG | - | tig0022071:6921-6940 | Msa1396750:intron | 30.0% | |
| ! | TCAATAGTTTATTTGGAGCA+GGG | - | tig0022071:7145-7164 | Msa1396750:intron | 30.0% |
| ! | TTTAATAGATTTTGCATGGC+AGG | + | tig0022071:7243-7262 | None:intergenic | 30.0% |
| ATTGTGGTGGCATTTAAAAA+TGG | + | tig0022071:7510-7529 | None:intergenic | 30.0% | |
| ! | ATTTTTAAATGCCACCACAA+TGG | - | tig0022071:7509-7528 | Msa1396750:intron | 30.0% |
| ! | AAATGACAGTTCCAGAATTT+TGG | - | tig0022071:7536-7555 | Msa1396750:intron | 30.0% |
| ! | AATGACAGTTCCAGAATTTT+GGG | - | tig0022071:7537-7556 | Msa1396750:intron | 30.0% |
| TTGAAAATTGTGATAAACCG+CGG | + | tig0022071:7728-7747 | None:intergenic | 30.0% | |
| !! | ATAACAAGCATTGGTTTGTA+AGG | + | tig0022071:7790-7809 | None:intergenic | 30.0% |
| ! | AGCTGGATTTTGCATTAATT+GGG | + | tig0022071:7959-7978 | None:intergenic | 30.0% |
| ! | TAGCTGGATTTTGCATTAAT+TGG | + | tig0022071:7960-7979 | None:intergenic | 30.0% |
| AATACCTGATTCATTGTTTG+AGG | + | tig0022071:8015-8034 | None:intergenic | 30.0% | |
| TCTCTCATTGAATTCATATC+AGG | + | tig0022071:8143-8162 | None:intergenic | 30.0% | |
| ! | TTATGTACTCAACACTGATT+TGG | + | tig0022071:8275-8294 | None:intergenic | 30.0% |
| TGCACCACAAACTTATTAAT+AGG | + | tig0022071:8305-8324 | None:intergenic | 30.0% | |
| ! | TCGATTAATTTTCAAAGGCT+CGG | + | tig0022071:8527-8546 | None:intergenic | 30.0% |
| ! | CACAGTCGATTAATTTTCAA+AGG | + | tig0022071:8532-8551 | None:intergenic | 30.0% |
| CAAAGTACAAGTATCAATCA+TGG | + | tig0022071:9005-9024 | None:intergenic | 30.0% | |
| GAAAATAATAAAGGGGATCT+CGG | - | tig0022071:9150-9169 | Msa1396750:intron | 30.0% | |
| AAAATAATAAAGGGGATCTC+GGG | - | tig0022071:9151-9170 | Msa1396750:intron | 30.0% | |
| TGGCTTGAGAAAAAAAATGT+AGG | - | tig0022071:9205-9224 | Msa1396750:intron | 30.0% | |
| AGATGACCAAGAATCAATAA+CGG | + | tig0022071:9321-9340 | None:intergenic | 30.0% | |
| TAGAGCAAAAAAACTGAGTT+TGG | + | tig0022071:9369-9388 | None:intergenic | 30.0% | |
| TGTCAAATGTCATCAGAAAA+AGG | + | tig0022071:9719-9738 | None:intergenic | 30.0% | |
| ATGAGTTGTATTTGAACCTA+GGG | - | tig0022071:9744-9763 | Msa1396750:CDS | 30.0% | |
| TTATAGCAGGATTTGAATGA+AGG | + | tig0022071:9772-9791 | None:intergenic | 30.0% | |
| ACTCAAAAAGGATTTATAGC+AGG | + | tig0022071:9785-9804 | None:intergenic | 30.0% | |
| TGCAAATCACATACTCAAAA+AGG | + | tig0022071:9797-9816 | None:intergenic | 30.0% | |
| ! | TTTGAGTATGTGATTTGCAT+TGG | - | tig0022071:9798-9817 | Msa1396750:intron | 30.0% |
| ! | TTGAGTATGTGATTTGCATT+GGG | - | tig0022071:9799-9818 | Msa1396750:intron | 30.0% |
| ATTTCCACTGAAGTTGTATT+GGG | + | tig0022071:9863-9882 | None:intergenic | 30.0% | |
| AATTTCCACTGAAGTTGTAT+TGG | + | tig0022071:9864-9883 | None:intergenic | 30.0% | |
| TCACTACTTATTTAGTCACA+AGG | + | tig0022071:9889-9908 | None:intergenic | 30.0% | |
| AAGACTTAGCTAAGATCTTA+GGG | + | tig0022071:10274-10293 | None:intergenic | 30.0% | |
| AAAGACTTAGCTAAGATCTT+AGG | + | tig0022071:10275-10294 | None:intergenic | 30.0% | |
| ! | TAGCTAAGTCTTTTATTAGG+TGG | - | tig0022071:10282-10301 | Msa1396750:CDS | 30.0% |
| AGGTGGATGATAAATCATAT+AGG | - | tig0022071:10299-10318 | Msa1396750:CDS | 30.0% | |
| ATTTGGTTAGAAACGGTTTA+AGG | + | tig0022071:10370-10389 | None:intergenic | 30.0% | |
| ACATGTATAAATGGATACGA+AGG | + | tig0022071:10414-10433 | None:intergenic | 30.0% | |
| TACATGTGAAACCATTTACA+TGG | - | tig0022071:10427-10446 | Msa1396750:CDS | 30.0% | |
| AAAAACCCACTTATAAACCT+GGG | + | tig0022071:10576-10595 | None:intergenic | 30.0% | |
| AAAAAACCCACTTATAAACC+TGG | + | tig0022071:10577-10596 | None:intergenic | 30.0% | |
| !!! | TTTTAGGGTTTACTTTCATG+AGG | - | tig0022071:10740-10759 | Msa1396750:intron | 30.0% |
| TACTGTATATGTGGTATTCA+TGG | + | tig0022071:10897-10916 | None:intergenic | 30.0% | |
| ! | TTGCTATTCTATAGATGCAT+GGG | + | tig0022071:11014-11033 | None:intergenic | 30.0% |
| ! | ATTGCTATTCTATAGATGCA+TGG | + | tig0022071:11015-11034 | None:intergenic | 30.0% |
| CATCTATAGAATAGCAATGA+CGG | - | tig0022071:11017-11036 | Msa1396750:intron | 30.0% | |
| ATCTATAGAATAGCAATGAC+GGG | - | tig0022071:11018-11037 | Msa1396750:intron | 30.0% | |
| AACTAACCATTTGATCTGTT+TGG | + | tig0022071:11227-11246 | None:intergenic | 30.0% | |
| ! | AACAGATCAAATGGTTAGTT+AGG | - | tig0022071:11227-11246 | Msa1396750:intron | 30.0% |
| ! | TAAAATTGGCTGATTTCCTT+TGG | - | tig0022071:11485-11504 | Msa1396750:intron | 30.0% |
| TATTTAAATGCCAAACAAGG+CGG | + | tig0022071:11564-11583 | None:intergenic | 30.0% | |
| GTGTCTCAACCATTATAATT+TGG | + | tig0022071:11593-11612 | None:intergenic | 30.0% | |
| AAAACTGACTAGTGAGATAT+AGG | - | tig0022071:11613-11632 | Msa1396750:intron | 30.0% | |
| TGAGATATAGGTTATACGTT+GGG | - | tig0022071:11625-11644 | Msa1396750:intron | 30.0% | |
| ! | TAACTTCATAGTTGCTGATT+TGG | - | tig0022071:11803-11822 | Msa1396750:CDS | 30.0% |
| ATGATTAGTAATTGGAGTGT+TGG | + | tig0022071:11969-11988 | None:intergenic | 30.0% | |
| CTCAAGATACACTAAAAGAA+GGG | - | tig0022071:12069-12088 | Msa1396750:five_prime_UTR | 30.0% | |
| TCAAGATACACTAAAAGAAG+GGG | - | tig0022071:12070-12089 | Msa1396750:five_prime_UTR | 30.0% | |
| ! | CAGGGAAAGAATTGATGTTT+TGG | + | tig0022071:5463-5482 | None:intergenic | 35.0% |
| CCTAACCCTAGAAAATGATT+TGG | + | tig0022071:5673-5692 | None:intergenic | 35.0% | |
| !!! | CCAAATCATTTTCTAGGGTT+AGG | - | tig0022071:5670-5689 | Msa1396750:three_prime_UTR | 35.0% |
| AGGGAAATTGAAGGTAGTTA+CGG | + | tig0022071:5710-5729 | None:intergenic | 35.0% | |
| ATCAACATTCGTTGTTCCAA+TGG | - | tig0022071:5808-5827 | Msa1396750:intron | 35.0% | |
| ! | AACGGAAAATTTGGAACCAT+TGG | + | tig0022071:5827-5846 | None:intergenic | 35.0% |
| GCTAATCTGAACGGAAAATT+TGG | + | tig0022071:5836-5855 | None:intergenic | 35.0% | |
| AACATCCTTGAAGGAAACAA+CGG | + | tig0022071:5869-5888 | None:intergenic | 35.0% | |
| AACGCTTGATTTATAAGGGA+AGG | - | tig0022071:5923-5942 | Msa1396750:intron | 35.0% | |
| TTGGTTTATTATACTCCCTC+CGG | - | tig0022071:6139-6158 | Msa1396750:intron | 35.0% | |
| AAAAATGACACCTTCGATGT+AGG | + | tig0022071:6355-6374 | None:intergenic | 35.0% | |
| !! | TTATTATTGGTGTCACCATG+CGG | - | tig0022071:6419-6438 | Msa1396750:CDS | 35.0% |
| CTCCAGTATTTGCATTTGTA+TGG | - | tig0022071:6492-6511 | Msa1396750:intron | 35.0% | |
| ACCCATACAAATGCAAATAC+TGG | + | tig0022071:6497-6516 | None:intergenic | 35.0% | |
| !! | GAAATTCTTTGGTGTTTCAG+AGG | - | tig0022071:6685-6704 | Msa1396750:intron | 35.0% |
| !! | AATTCTTTGGTGTTTCAGAG+GGG | - | tig0022071:6687-6706 | Msa1396750:intron | 35.0% |
| GAAATGGATATGCTCCTAAA+TGG | + | tig0022071:6725-6744 | None:intergenic | 35.0% | |
| AATACTCTCGGAAACAAGTT+AGG | + | tig0022071:6866-6885 | None:intergenic | 35.0% | |
| ACACATTCGCTAAATACTCT+CGG | + | tig0022071:6878-6897 | None:intergenic | 35.0% | |
| GGTGGTCTCAATAGTTTATT+TGG | - | tig0022071:7138-7157 | Msa1396750:intron | 35.0% | |
| ! | CTCAATAGTTTATTTGGAGC+AGG | - | tig0022071:7144-7163 | Msa1396750:intron | 35.0% |
| AACATTGAATCTTCTCCTGA+GGG | - | tig0022071:7444-7463 | Msa1396750:intron | 35.0% | |
| ! | ATGACAGTTCCAGAATTTTG+GGG | - | tig0022071:7538-7557 | Msa1396750:intron | 35.0% |
| !! | TTAGGAAGTGGGTTAGTATT+GGG | + | tig0022071:7636-7655 | None:intergenic | 35.0% |
| !! | ATTAGGAAGTGGGTTAGTAT+TGG | + | tig0022071:7637-7656 | None:intergenic | 35.0% |
| TCATCATGATCAACTGATCA+AGG | - | tig0022071:7691-7710 | Msa1396750:intron | 35.0% | |
| TGAAAATTGTGATAAACCGC+GGG | + | tig0022071:7727-7746 | None:intergenic | 35.0% | |
| CCAGCTAAAATAACAAGCAT+TGG | + | tig0022071:7799-7818 | None:intergenic | 35.0% | |
| !!! | CCAATGCTTGTTATTTTAGC+TGG | - | tig0022071:7796-7815 | Msa1396750:intron | 35.0% |
| !!! | ATGCTTGTTATTTTAGCTGG+AGG | - | tig0022071:7799-7818 | Msa1396750:intron | 35.0% |
| TGCATCATTTGAGAAATAGC+TGG | + | tig0022071:7976-7995 | None:intergenic | 35.0% | |
| CTGATTCATTGTTTGAGGAT+TGG | + | tig0022071:8010-8029 | None:intergenic | 35.0% | |
| CAATCCTCAAACAATGAATC+AGG | - | tig0022071:8008-8027 | Msa1396750:intron | 35.0% | |
| AACAGATATCTCTAACGTCT+TGG | - | tig0022071:8074-8093 | Msa1396750:intron | 35.0% | |
| AAAACATTCGAAGAAACTCC+GGG | + | tig0022071:8178-8197 | None:intergenic | 35.0% | |
| GAAAACATTCGAAGAAACTC+CGG | + | tig0022071:8179-8198 | None:intergenic | 35.0% | |
| CATACAATTTATCACAGTGC+CGG | + | tig0022071:8410-8429 | None:intergenic | 35.0% | |
| TAGCTGCTATTAGACAACAA+TGG | + | tig0022071:8622-8641 | None:intergenic | 35.0% | |
| TGTTGTCTAATAGCAGCTAT+AGG | - | tig0022071:8623-8642 | Msa1396750:intron | 35.0% | |
| ! | AATTCTATTTTCCCGCAATC+TGG | - | tig0022071:8761-8780 | Msa1396750:intron | 35.0% |
| ! | ATTCTATTTTCCCGCAATCT+GGG | - | tig0022071:8762-8781 | Msa1396750:intron | 35.0% |
| GCAATCAACACAGTAAGTAA+CGG | - | tig0022071:8931-8950 | Msa1396750:intron | 35.0% | |
| TATCTACTGTATGCTTGGTT+GGG | - | tig0022071:9108-9127 | Msa1396750:intron | 35.0% | |
| CTTACCATTTGATCTCTCAT+GGG | - | tig0022071:9270-9289 | Msa1396750:intron | 35.0% | |
| !! | GCAAAACCGTTATTGATTCT+TGG | - | tig0022071:9312-9331 | Msa1396750:intron | 35.0% |
| GCAAAAAAACTGAGTTTGGT+TGG | + | tig0022071:9365-9384 | None:intergenic | 35.0% | |
| !!! | TTTCTTGCCTCCTCTTTTTT+TGG | - | tig0022071:9454-9473 | Msa1396750:CDS | 35.0% |
| GCTATAACCAAAAAAAGAGG+AGG | + | tig0022071:9464-9483 | None:intergenic | 35.0% | |
| TGACAATCATGATCAGCAAA+AGG | + | tig0022071:9522-9541 | None:intergenic | 35.0% | |
| CTGTGTTTGCACATTTAAGT+AGG | + | tig0022071:9668-9687 | None:intergenic | 35.0% | |
| TCATCAGAAAAAGGCCATTA+TGG | + | tig0022071:9710-9729 | None:intergenic | 35.0% | |
| CATGAGTTGTATTTGAACCT+AGG | - | tig0022071:9743-9762 | Msa1396750:CDS | 35.0% | |
| ! | TGAGTATGTGATTTGCATTG+GGG | - | tig0022071:9800-9819 | Msa1396750:intron | 35.0% |
| ! | GAAAAGTTTAGGATGACAGA+AGG | + | tig0022071:9830-9849 | None:intergenic | 35.0% |
| TTTCCACTGAAGTTGTATTG+GGG | + | tig0022071:9862-9881 | None:intergenic | 35.0% | |
| ! | TTTACTATTTGCTACTGGCT+GGG | - | tig0022071:9945-9964 | Msa1396750:intron | 35.0% |
| TAAAATGATACGCTTTGTGC+AGG | - | tig0022071:9973-9992 | Msa1396750:CDS | 35.0% | |
| AAAATGATACGCTTTGTGCA+GGG | - | tig0022071:9974-9993 | Msa1396750:CDS | 35.0% | |
| ! | AGATTGGTGATCTTAAGAGA+TGG | + | tig0022071:10128-10147 | None:intergenic | 35.0% |
| ! | ATCTGGGTGTTTAAGTTATG+TGG | - | tig0022071:10325-10344 | Msa1396750:CDS | 35.0% |
| AGTTAGGCACAGCTTAAATT+TGG | + | tig0022071:10387-10406 | None:intergenic | 35.0% | |
| ! | ACTTTATTGGCCTAAAGCTT+CGG | + | tig0022071:10479-10498 | None:intergenic | 35.0% |
| GCCAATAAAGTCAAAGCTTT+AGG | - | tig0022071:10488-10507 | Msa1396750:CDS | 35.0% | |
| ! | GCCTAAAGCTTTGACTTTAT+TGG | + | tig0022071:10492-10511 | None:intergenic | 35.0% |
| AAATTGAAGCCTTGCATAAG+AGG | + | tig0022071:10517-10536 | None:intergenic | 35.0% | |
| TTAGTAGAAGAGGAGATGAA+GGG | + | tig0022071:10617-10636 | None:intergenic | 35.0% | |
| TAGATCAAGTCATATGAAGG+AGG | + | tig0022071:10697-10716 | None:intergenic | 35.0% | |
| CAGTAGATCAAGTCATATGA+AGG | + | tig0022071:10700-10719 | None:intergenic | 35.0% | |
| !!! | TATGCCTGCCATCTTTTTTT+AGG | - | tig0022071:10724-10743 | Msa1396750:intron | 35.0% |
| !!! | ATGCCTGCCATCTTTTTTTA+GGG | - | tig0022071:10725-10744 | Msa1396750:intron | 35.0% |
| AAACCCTAAAAAAAGATGGC+AGG | + | tig0022071:10731-10750 | None:intergenic | 35.0% | |
| CAGGCAAAAAGAAATAGAGA+TGG | + | tig0022071:10774-10793 | None:intergenic | 35.0% | |
| !! | TCTATTTCTTTTTGCCTGAC+TGG | - | tig0022071:10776-10795 | Msa1396750:intron | 35.0% |
| GCAAAAAGAAATAGAGGGAT+GGG | + | tig0022071:10803-10822 | None:intergenic | 35.0% | |
| CAAGGGCAAAAAGAAATAGA+GGG | + | tig0022071:10808-10827 | None:intergenic | 35.0% | |
| ATTTCAGATATTCCTGTTGG+CGG | - | tig0022071:10841-10860 | Msa1396750:intron | 35.0% | |
| TGTATATGTGGTATTCATGG+CGG | + | tig0022071:10894-10913 | None:intergenic | 35.0% | |
| TAGGTAAGCTACTGTATATG+TGG | + | tig0022071:10906-10925 | None:intergenic | 35.0% | |
| TCTATAGAATAGCAATGACG+GGG | - | tig0022071:11019-11038 | Msa1396750:intron | 35.0% | |
| GTGAGATATAGGTTATACGT+TGG | - | tig0022071:11624-11643 | Msa1396750:intron | 35.0% | |
| ATGTCATCAGAACTTGAAAG+AGG | + | tig0022071:11674-11693 | None:intergenic | 35.0% | |
| AAATCCCAAACGCTAAAATG+TGG | - | tig0022071:11858-11877 | Msa1396750:CDS | 35.0% | |
| ACTTGCACATTTGCAAGTAT+TGG | - | tig0022071:12045-12064 | Msa1396750:five_prime_UTR | 35.0% | |
| ! | CCTTCTTTTAGTGTATCTTG+AGG | + | tig0022071:12071-12090 | None:intergenic | 35.0% |
| CCTCAAGATACACTAAAAGA+AGG | - | tig0022071:12068-12087 | Msa1396750:five_prime_UTR | 35.0% | |
| !! | AGTGGAAGCGTGTGAAATTT+TGG | + | tig0022071:5643-5662 | None:intergenic | 40.0% |
| ATTGAAGGTAGTTACGGTTG+TGG | + | tig0022071:5704-5723 | None:intergenic | 40.0% | |
| CTGAGCAATAACATCCTTGA+AGG | + | tig0022071:5878-5897 | None:intergenic | 40.0% | |
| GATCAAACGCTTCAAAGCTA+TGG | - | tig0022071:5958-5977 | Msa1396750:intron | 40.0% | |
| TTCTTGTAAATAGGACCGGA+GGG | + | tig0022071:6157-6176 | None:intergenic | 40.0% | |
| TTTCTTGTAAATAGGACCGG+AGG | + | tig0022071:6158-6177 | None:intergenic | 40.0% | |
| TCTTGTAAAAAGGACAGGAC+CGG | - | tig0022071:6275-6294 | Msa1396750:intron | 40.0% | |
| !! | TATTATTGGTGTCACCATGC+GGG | - | tig0022071:6420-6439 | Msa1396750:CDS | 40.0% |
| GGACCCACTATATCTCTAAA+TGG | - | tig0022071:6807-6826 | Msa1396750:intron | 40.0% | |
| AGCATTAGTAGTGGTCGTAT+TGG | + | tig0022071:7019-7038 | None:intergenic | 40.0% | |
| TGCAATTGTTCAAGATCTGG+AGG | + | tig0022071:7171-7190 | None:intergenic | 40.0% | |
| TGCTGCAATTGTTCAAGATC+TGG | + | tig0022071:7174-7193 | None:intergenic | 40.0% | |
| ! | TCTGTGGGTTACTCATTAGA+AGG | + | tig0022071:7287-7306 | None:intergenic | 40.0% |
| TCATTTCACGCATGATCTCA+GGG | + | tig0022071:7398-7417 | None:intergenic | 40.0% | |
| ATCATTTCACGCATGATCTC+AGG | + | tig0022071:7399-7418 | None:intergenic | 40.0% | |
| AGATCATGCGTGAAATGATG+AGG | - | tig0022071:7400-7419 | Msa1396750:intron | 40.0% | |
| CAACATTGAATCTTCTCCTG+AGG | - | tig0022071:7443-7462 | Msa1396750:intron | 40.0% | |
| ACATTGAATCTTCTCCTGAG+GGG | - | tig0022071:7445-7464 | Msa1396750:intron | 40.0% | |
| AGCATTAGTAGTTGAGGGAT+TGG | + | tig0022071:7595-7614 | None:intergenic | 40.0% | |
| GCTTCAGCATTAGTAGTTGA+GGG | + | tig0022071:7600-7619 | None:intergenic | 40.0% | |
| TGCTTCAGCATTAGTAGTTG+AGG | + | tig0022071:7601-7620 | None:intergenic | 40.0% | |
| ATGACCAAGGATTAGGAAGT+GGG | + | tig0022071:7647-7666 | None:intergenic | 40.0% | |
| GAAAATTGTGATAAACCGCG+GGG | + | tig0022071:7726-7745 | None:intergenic | 40.0% | |
| TGATCTCCTGACATTAGTGT+GGG | + | tig0022071:7827-7846 | None:intergenic | 40.0% | |
| TTGATCTCCTGACATTAGTG+TGG | + | tig0022071:7828-7847 | None:intergenic | 40.0% | |
| GTATGAATACTGATCAGCGT+GGG | - | tig0022071:8114-8133 | Msa1396750:intron | 40.0% | |
| ACTATCCAACCACTAGATCT+AGG | + | tig0022071:8494-8513 | None:intergenic | 40.0% | |
| TAGATCTAGTGGTTGGATAG+TGG | - | tig0022071:8493-8512 | Msa1396750:intron | 40.0% | |
| ! | TAATTTTCAAAGGCTCGGCT+AGG | + | tig0022071:8522-8541 | None:intergenic | 40.0% |
| TTGTACTGAATCGTGTATCG+TGG | + | tig0022071:8679-8698 | None:intergenic | 40.0% | |
| AACTCGTGTCCTATCAACTA+TGG | - | tig0022071:8858-8877 | Msa1396750:intron | 40.0% | |
| CAAGCTCTTATGACTCAACT+TGG | - | tig0022071:8902-8921 | Msa1396750:intron | 40.0% | |
| GAAACATGGATGTGCCAAAA+TGG | - | tig0022071:9066-9085 | Msa1396750:intron | 40.0% | |
| ! | TACATGAGCACCTACCATTT+TGG | + | tig0022071:9083-9102 | None:intergenic | 40.0% |
| CCAAGCATACAGTAGATACA+AGG | + | tig0022071:9106-9125 | None:intergenic | 40.0% | |
| CCTTGTATCTACTGTATGCT+TGG | - | tig0022071:9103-9122 | Msa1396750:intron | 40.0% | |
| GTATCTACTGTATGCTTGGT+TGG | - | tig0022071:9107-9126 | Msa1396750:intron | 40.0% | |
| CCATGAGAGATCAAATGGTA+AGG | + | tig0022071:9272-9291 | None:intergenic | 40.0% | |
| CCTTACCATTTGATCTCTCA+TGG | - | tig0022071:9269-9288 | Msa1396750:intron | 40.0% | |
| GATTTGAATGAAGGAACCCT+AGG | + | tig0022071:9763-9782 | None:intergenic | 40.0% | |
| GGGCAGGTTAAGAAAAGTTT+AGG | + | tig0022071:9841-9860 | None:intergenic | 40.0% | |
| TTCCACTGAAGTTGTATTGG+GGG | + | tig0022071:9861-9880 | None:intergenic | 40.0% | |
| ! | GTTTACTATTTGCTACTGGC+TGG | - | tig0022071:9944-9963 | Msa1396750:intron | 40.0% |
| ! | CTATGCTCTGTTAGTCTGTT+TGG | - | tig0022071:10070-10089 | Msa1396750:CDS | 40.0% |
| GTGATCTTAAGAGATGGTCA+AGG | + | tig0022071:10122-10141 | None:intergenic | 40.0% | |
| ! | TTTAAGTTATGTGGCCCTTG+AGG | - | tig0022071:10334-10353 | Msa1396750:CDS | 40.0% |
| TGGATACGAAGGATTCAGTT+AGG | + | tig0022071:10403-10422 | None:intergenic | 40.0% | |
| ! | CATTTGGTTGGCCATGTAAA+TGG | + | tig0022071:10441-10460 | None:intergenic | 40.0% |
| CATTTACATGGCCAACCAAA+TGG | - | tig0022071:10439-10458 | Msa1396750:CDS | 40.0% | |
| CTTAGTAGAAGAGGAGATGA+AGG | + | tig0022071:10618-10637 | None:intergenic | 40.0% | |
| CTTCATCTCCTCTTCTACTA+AGG | - | tig0022071:10616-10635 | Msa1396750:CDS | 40.0% | |
| AATTGAGGCCTTAGTAGAAG+AGG | + | tig0022071:10627-10646 | None:intergenic | 40.0% | |
| CATATGAAGGAGGAGATGAA+GGG | + | tig0022071:10687-10706 | None:intergenic | 40.0% | |
| TCATATGAAGGAGGAGATGA+AGG | + | tig0022071:10688-10707 | None:intergenic | 40.0% | |
| GGTTTACTTTCATGAGGTGT+GGG | - | tig0022071:10746-10765 | Msa1396750:intron | 40.0% | |
| GGCAAAAAGAAATAGAGGGA+TGG | + | tig0022071:10804-10823 | None:intergenic | 40.0% | |
| GCAAGGGCAAAAAGAAATAG+AGG | + | tig0022071:10809-10828 | None:intergenic | 40.0% | |
| ! | TATCTGAAATGGCGAATGAG+AGG | + | tig0022071:10831-10850 | None:intergenic | 40.0% |
| GCCATTTCAGATATTCCTGT+TGG | - | tig0022071:10838-10857 | Msa1396750:intron | 40.0% | |
| GCCAACAGGAATATCTGAAA+TGG | + | tig0022071:10842-10861 | None:intergenic | 40.0% | |
| TATGGCGGTTGCCATTATAA+TGG | + | tig0022071:10869-10888 | None:intergenic | 40.0% | |
| TATATGTGGTATTCATGGCG+GGG | + | tig0022071:10892-10911 | None:intergenic | 40.0% | |
| GTATATGTGGTATTCATGGC+GGG | + | tig0022071:10893-10912 | None:intergenic | 40.0% | |
| CAGCACAGTATTTGGGTATT+AGG | + | tig0022071:10925-10944 | None:intergenic | 40.0% | |
| CAACATGCAGCACAGTATTT+GGG | + | tig0022071:10932-10951 | None:intergenic | 40.0% | |
| CTATAGAATAGCAATGACGG+GGG | - | tig0022071:11020-11039 | Msa1396750:intron | 40.0% | |
| GAGATGTTATCGAGCATGTT+TGG | - | tig0022071:11173-11192 | Msa1396750:intron | 40.0% | |
| ATGTTATCGAGCATGTTTGG+TGG | - | tig0022071:11176-11195 | Msa1396750:intron | 40.0% | |
| ! | TTGATCTGTTTGGAACAGCT+AGG | + | tig0022071:11217-11236 | None:intergenic | 40.0% |
| GCTGTTCCAAACAGATCAAA+TGG | - | tig0022071:11218-11237 | Msa1396750:intron | 40.0% | |
| TGGACAGTAGCAGGTAAAAT+TGG | - | tig0022071:11471-11490 | Msa1396750:intron | 40.0% | |
| TGAACGCAACTGAGTTTGAA+TGG | + | tig0022071:11540-11559 | None:intergenic | 40.0% | |
| !! | TTCATAGTTGCTGATTTGGC+AGG | - | tig0022071:11807-11826 | Msa1396750:CDS | 40.0% |
| !! | CACACCACATTTTAGCGTTT+GGG | + | tig0022071:11865-11884 | None:intergenic | 40.0% |
| !! | TCACACCACATTTTAGCGTT+TGG | + | tig0022071:11866-11885 | None:intergenic | 40.0% |
| CATCAATTCTTTCCCTGCGT+AGG | - | tig0022071:5466-5485 | Msa1396750:three_prime_UTR | 45.0% | |
| AATTCTTTCCCTGCGTAGGT+GGG | - | tig0022071:5470-5489 | Msa1396750:three_prime_UTR | 45.0% | |
| GTTGATCTTAACTCCTCCGT+CGG | + | tig0022071:5794-5813 | None:intergenic | 45.0% | |
| GGAATCGAGGCTAATCTGAA+CGG | + | tig0022071:5845-5864 | None:intergenic | 45.0% | |
| ! | TTCCACCGTTGTTTCCTTCA+AGG | - | tig0022071:5861-5880 | Msa1396750:intron | 45.0% |
| ATCCTTGAAGGAAACAACGG+TGG | + | tig0022071:5866-5885 | None:intergenic | 45.0% | |
| CTTCGATGTAGGTGCTAGAT+AGG | + | tig0022071:6344-6363 | None:intergenic | 45.0% | |
| CTATCTAGCACCTACATCGA+AGG | - | tig0022071:6342-6361 | Msa1396750:intron | 45.0% | |
| TGTCGACAATCAATGGAACG+TGG | - | tig0022071:6539-6558 | Msa1396750:intron | 45.0% | |
| !! | TTTGGTGTTTCAGAGGGGTT+AGG | - | tig0022071:6692-6711 | Msa1396750:intron | 45.0% |
| GGTTAGGATCGTCTCCATTT+AGG | - | tig0022071:6708-6727 | Msa1396750:intron | 45.0% | |
| TTTACGCCTGCCAATACAAC+TGG | - | tig0022071:6973-6992 | Msa1396750:intron | 45.0% | |
| ATTAGCCCCACCAGTTGTAT+TGG | + | tig0022071:6986-7005 | None:intergenic | 45.0% | |
| ! | AGCAGCTCTAGCATTAGTAG+TGG | + | tig0022071:7028-7047 | None:intergenic | 45.0% |
| ACTACTAATGCTAGAGCTGC+TGG | - | tig0022071:7027-7046 | Msa1396750:intron | 45.0% | |
| TTGGAGCTTCACTGTTTCCA+GGG | - | tig0022071:7085-7104 | Msa1396750:intron | 45.0% | |
| !! | CTAGGAGGTATCAATGGGAT+GGG | - | tig0022071:7108-7127 | Msa1396750:intron | 45.0% |
| TAGAAGGTTGCGCACTATCT+CGG | + | tig0022071:7271-7290 | None:intergenic | 45.0% | |
| CCATAAGCTCTTGCATCTGT+GGG | + | tig0022071:7302-7321 | None:intergenic | 45.0% | |
| TCCATAAGCTCTTGCATCTG+TGG | + | tig0022071:7303-7322 | None:intergenic | 45.0% | |
| TATGGATAGAAACCCTGAGC+TGG | - | tig0022071:7317-7336 | Msa1396750:intron | 45.0% | |
| TTCTTGTAGCCTCAAGTGTC+TGG | + | tig0022071:7374-7393 | None:intergenic | 45.0% | |
| TTAAATGCCACCACAATGGC+AGG | - | tig0022071:7513-7532 | Msa1396750:intron | 45.0% | |
| ! | ACTGTCATTTCCTGCCATTG+TGG | + | tig0022071:7526-7545 | None:intergenic | 45.0% |
| !! | TCCAGAATTTTGGGGACTCA+AGG | - | tig0022071:7546-7565 | Msa1396750:intron | 45.0% |
| ACCTTGAGTCCCCAAAATTC+TGG | + | tig0022071:7550-7569 | None:intergenic | 45.0% | |
| !! | AGAATTTTGGGGACTCAAGG+TGG | - | tig0022071:7549-7568 | Msa1396750:intron | 45.0% |
| !! | TGGGTTAGTATTGGGTACAG+GGG | + | tig0022071:7628-7647 | None:intergenic | 45.0% |
| !! | GTGGGTTAGTATTGGGTACA+GGG | + | tig0022071:7629-7648 | None:intergenic | 45.0% |
| !! | AGTGGGTTAGTATTGGGTAC+AGG | + | tig0022071:7630-7649 | None:intergenic | 45.0% |
| CTAACCCACTTCCTAATCCT+TGG | - | tig0022071:7640-7659 | Msa1396750:intron | 45.0% | |
| GATGACCAAGGATTAGGAAG+TGG | + | tig0022071:7648-7667 | None:intergenic | 45.0% | |
| TTACTTGGAGCAGATGACCA+AGG | + | tig0022071:7660-7679 | None:intergenic | 45.0% | |
| GGTATGAATACTGATCAGCG+TGG | - | tig0022071:8113-8132 | Msa1396750:intron | 45.0% | |
| GAGAGAAGTGATGCAAAACC+CGG | - | tig0022071:8157-8176 | Msa1396750:intron | 45.0% | |
| AGAGTCAGACCTAGATCTAG+TGG | - | tig0022071:8482-8501 | Msa1396750:intron | 45.0% | |
| TCAGACCTAGATCTAGTGGT+TGG | - | tig0022071:8486-8505 | Msa1396750:intron | 45.0% | |
| CTGAATCGTGTATCGTGGAA+TGG | + | tig0022071:8674-8693 | None:intergenic | 45.0% | |
| TGTTGTCAATCCCAGATTGC+GGG | + | tig0022071:8775-8794 | None:intergenic | 45.0% | |
| GTGTTGTCAATCCCAGATTG+CGG | + | tig0022071:8776-8795 | None:intergenic | 45.0% | |
| GAGTTGCTGCCATAGTTGAT+AGG | + | tig0022071:8870-8889 | None:intergenic | 45.0% | |
| CATGGATGTGCCAAAATGGT+AGG | - | tig0022071:9070-9089 | Msa1396750:intron | 45.0% | |
| AATAAAGGGGATCTCGGGAT+TGG | - | tig0022071:9156-9175 | Msa1396750:intron | 45.0% | |
| GATACGGCGTGATGTTTGTT+GGG | - | tig0022071:9178-9197 | Msa1396750:intron | 45.0% | |
| ! | CGTGATGTTTGTTGGGCATA+TGG | - | tig0022071:9185-9204 | Msa1396750:intron | 45.0% |
| TTCTCACACTCTCTCATCTG+TGG | + | tig0022071:9241-9260 | None:intergenic | 45.0% | |
| AGCACCCATGAGAGATCAAA+TGG | + | tig0022071:9277-9296 | None:intergenic | 45.0% | |
| AAGTCCTAAGAGATGTGCGA+GGG | + | tig0022071:9398-9417 | None:intergenic | 45.0% | |
| ATGTGCAAACACAGCCTAGA+TGG | - | tig0022071:9674-9693 | Msa1396750:CDS | 45.0% | |
| TGTGCAAACACAGCCTAGAT+GGG | - | tig0022071:9675-9694 | Msa1396750:CDS | 45.0% | |
| AAACACAGCCTAGATGGGTA+TGG | - | tig0022071:9680-9699 | Msa1396750:CDS | 45.0% | |
| ATGGGTATGGCTCACCATAA+TGG | - | tig0022071:9693-9712 | Msa1396750:CDS | 45.0% | |
| ! | ATGCAGAGAGCATGTAGAAG+AGG | + | tig0022071:10217-10236 | None:intergenic | 45.0% |
| ! | TATTGCCCATGCCATTTGGT+TGG | + | tig0022071:10453-10472 | None:intergenic | 45.0% |
| ! | GCTTTATTGCCCATGCCATT+TGG | + | tig0022071:10457-10476 | None:intergenic | 45.0% |
| GGCAATAAAGCCGAAGCTTT+AGG | - | tig0022071:10466-10485 | Msa1396750:CDS | 45.0% | |
| TTTAGGCCTCCTCTTATGCA+AGG | - | tig0022071:10505-10524 | Msa1396750:CDS | 45.0% | |
| TTGAAGCCTTGCATAAGAGG+AGG | + | tig0022071:10514-10533 | None:intergenic | 45.0% | |
| GGGTTTACTTTCATGAGGTG+TGG | - | tig0022071:10745-10764 | Msa1396750:intron | 45.0% | |
| AAATGGCGAATGAGAGGCAA+GGG | + | tig0022071:10825-10844 | None:intergenic | 45.0% | |
| ATTATAATGGCACCGCCAAC+AGG | + | tig0022071:10856-10875 | None:intergenic | 45.0% | |
| !! | TGTTGGCGGTGCCATTATAA+TGG | - | tig0022071:10855-10874 | Msa1396750:intron | 45.0% |
| GCAACATGCAGCACAGTATT+TGG | + | tig0022071:10933-10952 | None:intergenic | 45.0% | |
| !! | TGAGTCAGCCTTGCTTTTGA+AGG | - | tig0022071:10987-11006 | Msa1396750:intron | 45.0% |
| !! | AATGACGGGGGAGGTTTTTA+AGG | - | tig0022071:11032-11051 | Msa1396750:intron | 45.0% |
| !! | ATGACGGGGGAGGTTTTTAA+GGG | - | tig0022071:11033-11052 | Msa1396750:intron | 45.0% |
| CTGGATGATGCAATTGCCAT+TGG | - | tig0022071:11061-11080 | Msa1396750:intron | 45.0% | |
| AGTAGGACCAGTGAACAACT+TGG | - | tig0022071:11145-11164 | Msa1396750:intron | 45.0% | |
| GTAGGACCAGTGAACAACTT+GGG | - | tig0022071:11146-11165 | Msa1396750:intron | 45.0% | |
| TAGGACCAGTGAACAACTTG+GGG | - | tig0022071:11147-11166 | Msa1396750:intron | 45.0% | |
| GTAGCATACAATGTCTCTGG+AGG | + | tig0022071:11337-11356 | None:intergenic | 45.0% | |
| TGGGTAGCATACAATGTCTC+TGG | + | tig0022071:11340-11359 | None:intergenic | 45.0% | |
| CTTACCCAGCTTCAAGAGAT+GGG | - | tig0022071:11361-11380 | Msa1396750:intron | 45.0% | |
| GAATCCCATCTCTTGAAGCT+GGG | + | tig0022071:11368-11387 | None:intergenic | 45.0% | |
| AGAATCCCATCTCTTGAAGC+TGG | + | tig0022071:11369-11388 | None:intergenic | 45.0% | |
| TTGACACGCAAGAGAACTTG+AGG | - | tig0022071:11389-11408 | Msa1396750:intron | 45.0% | |
| TGACACGCAAGAGAACTTGA+GGG | - | tig0022071:11390-11409 | Msa1396750:intron | 45.0% | |
| AGGGCTCTTATTGCTACATC+AGG | - | tig0022071:11409-11428 | Msa1396750:intron | 45.0% | |
| GGGCTCTTATTGCTACATCA+GGG | - | tig0022071:11410-11429 | Msa1396750:intron | 45.0% | |
| ATCAGGGAATGTTCATGCAG+CGG | - | tig0022071:11426-11445 | Msa1396750:intron | 45.0% | |
| ! | TGGCTGATTTCCTTTGGTGA+AGG | - | tig0022071:11491-11510 | Msa1396750:intron | 45.0% |
| CACTGAAGAACCTTCACCAA+AGG | + | tig0022071:11504-11523 | None:intergenic | 45.0% | |
| CTTTGGTGAAGGTTCTTCAG+TGG | - | tig0022071:11502-11521 | Msa1396750:intron | 45.0% | |
| !! | ATAGTTGCTGATTTGGCAGG+TGG | - | tig0022071:11810-11829 | Msa1396750:CDS | 45.0% |
| !! | TAGTTGCTGATTTGGCAGGT+GGG | - | tig0022071:11811-11830 | Msa1396750:CDS | 45.0% |
| !! | TATAAAATAATAATTAATAG+TGG | - | tig0022071:6782-6801 | Msa1396750:intron | 5.0% |
| CAATTCTTTCCCTGCGTAGG+TGG | - | tig0022071:5469-5488 | Msa1396750:three_prime_UTR | 50.0% | |
| AGGAAACAACGGTGGAATCG+AGG | + | tig0022071:5858-5877 | None:intergenic | 50.0% | |
| TGTAAAAAGGACAGGACCGG+AGG | - | tig0022071:6278-6297 | Msa1396750:intron | 50.0% | |
| GTAAAAAGGACAGGACCGGA+GGG | - | tig0022071:6279-6298 | Msa1396750:intron | 50.0% | |
| GGCAGATCACACTGTCCATT+TGG | - | tig0022071:6942-6961 | Msa1396750:intron | 50.0% | |
| ! | CACACTGTCCATTTGGTTCG+TGG | - | tig0022071:6949-6968 | Msa1396750:intron | 50.0% |
| GCGTAAAGCCACGAACCAAA+TGG | + | tig0022071:6960-6979 | None:intergenic | 50.0% | |
| ! | TAGAGCTGCTGGTGCTAATG+AGG | - | tig0022071:7038-7057 | Msa1396750:intron | 50.0% |
| ! | AGAGCTGCTGGTGCTAATGA+GGG | - | tig0022071:7039-7058 | Msa1396750:intron | 50.0% |
| AACAGTGAAGCTCCAAGTCC+AGG | + | tig0022071:7081-7100 | None:intergenic | 50.0% | |
| CTTGGAGCTTCACTGTTTCC+AGG | - | tig0022071:7084-7103 | Msa1396750:intron | 50.0% | |
| !! | CAGGGCTAGGAGGTATCAAT+GGG | - | tig0022071:7103-7122 | Msa1396750:intron | 50.0% |
| !! | GCTAGGAGGTATCAATGGGA+TGG | - | tig0022071:7107-7126 | Msa1396750:intron | 50.0% |
| AGAAGGTTGCGCACTATCTC+GGG | + | tig0022071:7270-7289 | None:intergenic | 50.0% | |
| CCCACAGATGCAAGAGCTTA+TGG | - | tig0022071:7299-7318 | Msa1396750:intron | 50.0% | |
| TGAGTATGTGTGCCAGCTCA+GGG | + | tig0022071:7332-7351 | None:intergenic | 50.0% | |
| TTGAGTATGTGTGCCAGCTC+AGG | + | tig0022071:7333-7352 | None:intergenic | 50.0% | |
| CTCAGCATGTTAAACCCCTC+AGG | + | tig0022071:7462-7481 | None:intergenic | 50.0% | |
| CTGAGGGGTTTAACATGCTG+AGG | - | tig0022071:7460-7479 | Msa1396750:intron | 50.0% | |
| GTCATTTCCTGCCATTGTGG+TGG | + | tig0022071:7523-7542 | None:intergenic | 50.0% | |
| ! | TGGTCGATGGATTCCTCGTT+TGG | + | tig0022071:7575-7594 | None:intergenic | 50.0% |
| !! | GTAGTTGAGGGATTGGTCGA+TGG | + | tig0022071:7588-7607 | None:intergenic | 50.0% |
| GGAGCAGATGACCAAGGATT+AGG | + | tig0022071:7654-7673 | None:intergenic | 50.0% | |
| TCAAGGAACTTAATGCCCCG+CGG | - | tig0022071:7708-7727 | Msa1396750:intron | 50.0% | |
| CTTGGTATGCCAGATCTCGA+AGG | - | tig0022071:7898-7917 | Msa1396750:intron | 50.0% | |
| ! | CCAGATCTCGAAGGCATGTT+GGG | - | tig0022071:7907-7926 | Msa1396750:intron | 50.0% |
| TGGGTCAATGAACCAGCATC+TGG | + | tig0022071:7940-7959 | None:intergenic | 50.0% | |
| TCTGCCTACCTGCATTGTCT+CGG | + | tig0022071:8207-8226 | None:intergenic | 50.0% | |
| ! | TTTTCAAAGGCTCGGCTAGG+AGG | + | tig0022071:8519-8538 | None:intergenic | 50.0% |
| GGATACGGCGTGATGTTTGT+TGG | - | tig0022071:9177-9196 | Msa1396750:intron | 50.0% | |
| CAAGTCCTAAGAGATGTGCG+AGG | + | tig0022071:9399-9418 | None:intergenic | 50.0% | |
| ATGGTGAGCCATACCCATCT+AGG | + | tig0022071:9691-9710 | None:intergenic | 50.0% | |
| ACTGAAGTTGTATTGGGGGC+AGG | + | tig0022071:9857-9876 | None:intergenic | 50.0% | |
| TGCCCCCAATACAACTTCAG+TGG | - | tig0022071:9856-9875 | Msa1396750:intron | 50.0% | |
| AGTTATGTGGCCCTTGAGGT+AGG | - | tig0022071:10338-10357 | Msa1396750:CDS | 50.0% | |
| GTTATGTGGCCCTTGAGGTA+GGG | - | tig0022071:10339-10358 | Msa1396750:CDS | 50.0% | |
| ACATGGCCAACCAAATGGCA+TGG | - | tig0022071:10444-10463 | Msa1396750:CDS | 50.0% | |
| CATGGCCAACCAAATGGCAT+GGG | - | tig0022071:10445-10464 | Msa1396750:CDS | 50.0% | |
| TATACATGTAGAGGCTGCCC+AGG | - | tig0022071:10556-10575 | Msa1396750:CDS | 50.0% | |
| AGGCTGCCCAGGTTTATAAG+TGG | - | tig0022071:10567-10586 | Msa1396750:CDS | 50.0% | |
| GGCTGCCCAGGTTTATAAGT+GGG | - | tig0022071:10568-10587 | Msa1396750:CDS | 50.0% | |
| GGAGGAGATGAAGGGTTACT+TGG | + | tig0022071:10679-10698 | None:intergenic | 50.0% | |
| GAAATGGCGAATGAGAGGCA+AGG | + | tig0022071:10826-10845 | None:intergenic | 50.0% | |
| GCATGGGACCTTCAAAAGCA+AGG | + | tig0022071:10998-11017 | None:intergenic | 50.0% | |
| ! | TAGAATAGCAATGACGGGGG+AGG | - | tig0022071:11023-11042 | Msa1396750:intron | 50.0% |
| !! | TGACGGGGGAGGTTTTTAAG+GGG | - | tig0022071:11034-11053 | Msa1396750:intron | 50.0% |
| ACCAGTGAACAACTTGGGGT+TGG | - | tig0022071:11151-11170 | Msa1396750:intron | 50.0% | |
| TCCAACCCCAAGTTGTTCAC+TGG | + | tig0022071:11155-11174 | None:intergenic | 50.0% | |
| !! | TCGAGCATGTTTGGTGGACT+TGG | - | tig0022071:11182-11201 | Msa1396750:intron | 50.0% |
| !! | ATGTTTGGTGGACTTGGAGC+TGG | - | tig0022071:11188-11207 | Msa1396750:intron | 50.0% |
| GGAAGACATCGAGGAGAGAT+CGG | + | tig0022071:11309-11328 | None:intergenic | 50.0% | |
| ! | ACAATGTCTCTGGAGGCTCT+GGG | + | tig0022071:11330-11349 | None:intergenic | 50.0% |
| ! | TACAATGTCTCTGGAGGCTC+TGG | + | tig0022071:11331-11350 | None:intergenic | 50.0% |
| CTCTTGAAGCTGGGTAAGCT+GGG | + | tig0022071:11359-11378 | None:intergenic | 50.0% | |
| TCTCTTGAAGCTGGGTAAGC+TGG | + | tig0022071:11360-11379 | None:intergenic | 50.0% | |
| GCTTACCCAGCTTCAAGAGA+TGG | - | tig0022071:11360-11379 | Msa1396750:intron | 50.0% | |
| !! | GAGCGACTTTTGGGAAACTC+TGG | - | tig0022071:11451-11470 | Msa1396750:intron | 50.0% |
| ! | TTGCGTTCAACCGCCTTGTT+TGG | - | tig0022071:11551-11570 | Msa1396750:intron | 50.0% |
| GAGACTAACCCACCTACGCA+GGG | + | tig0022071:5481-5500 | None:intergenic | 55.0% | |
| AGAGACTAACCCACCTACGC+AGG | + | tig0022071:5482-5501 | None:intergenic | 55.0% | |
| GTCGGTGGGAGGGAAATTGA+AGG | + | tig0022071:5719-5738 | None:intergenic | 55.0% | |
| GATCTTAACTCCTCCGTCGG+TGG | + | tig0022071:5791-5810 | None:intergenic | 55.0% | |
| ACGCCTGCCAATACAACTGG+TGG | - | tig0022071:6976-6995 | Msa1396750:intron | 55.0% | |
| CGCCTGCCAATACAACTGGT+GGG | - | tig0022071:6977-6996 | Msa1396750:intron | 55.0% | |
| GCCTGCCAATACAACTGGTG+GGG | - | tig0022071:6978-6997 | Msa1396750:intron | 55.0% | |
| ACTGGTGGGGCTAATACCAC+TGG | - | tig0022071:6991-7010 | Msa1396750:intron | 55.0% | |
| ! | AGTGGTCGTATTGGCACCAG+TGG | + | tig0022071:7010-7029 | None:intergenic | 55.0% |
| ! | CTGCTGGTGCTAATGAGGGT+GGG | - | tig0022071:7043-7062 | Msa1396750:intron | 55.0% |
| ! | TGCTGGTGCTAATGAGGGTG+GGG | - | tig0022071:7044-7063 | Msa1396750:intron | 55.0% |
| GCTAATGAGGGTGGGGGATT+AGG | - | tig0022071:7051-7070 | Msa1396750:intron | 55.0% | |
| AATGAGGGTGGGGGATTAGG+AGG | - | tig0022071:7054-7073 | Msa1396750:intron | 55.0% | |
| GGATTAGGAGGACCTGGACT+TGG | - | tig0022071:7066-7085 | Msa1396750:intron | 55.0% | |
| GCTTCACTGTTTCCAGGGCT+AGG | - | tig0022071:7090-7109 | Msa1396750:intron | 55.0% | |
| TCACTGTTTCCAGGGCTAGG+AGG | - | tig0022071:7093-7112 | Msa1396750:intron | 55.0% | |
| CCATTGATACCTCCTAGCCC+TGG | + | tig0022071:7105-7124 | None:intergenic | 55.0% | |
| !! | CCAGGGCTAGGAGGTATCAA+TGG | - | tig0022071:7102-7121 | Msa1396750:intron | 55.0% |
| !! | GGAGGTATCAATGGGATGGG+AGG | - | tig0022071:7111-7130 | Msa1396750:intron | 55.0% |
| GGTATCAATGGGATGGGAGG+AGG | - | tig0022071:7114-7133 | Msa1396750:intron | 55.0% | |
| ATCAATGGGATGGGAGGAGG+TGG | - | tig0022071:7117-7136 | Msa1396750:intron | 55.0% | |
| AGTGTCTGGCGAAGTGTGCT+AGG | + | tig0022071:7360-7379 | None:intergenic | 55.0% | |
| CACACTTCGCCAGACACTTG+AGG | - | tig0022071:7362-7381 | Msa1396750:intron | 55.0% | |
| ! | GAGGTGCCCACACTAATGTC+AGG | - | tig0022071:7818-7837 | Msa1396750:intron | 55.0% |
| CACCTACTGCTGCAGATGCT+CGG | - | tig0022071:7848-7867 | Msa1396750:intron | 55.0% | |
| ! | GCCAGATCTCGAAGGCATGT+TGG | - | tig0022071:7906-7925 | Msa1396750:intron | 55.0% |
| CCCAACATGCCTTCGAGATC+TGG | + | tig0022071:7910-7929 | None:intergenic | 55.0% | |
| ! | GATCTCGAAGGCATGTTGGG+TGG | - | tig0022071:7910-7929 | Msa1396750:intron | 55.0% |
| TTGGGTGGTATGCCAGATGC+TGG | - | tig0022071:7925-7944 | Msa1396750:intron | 55.0% | |
| TTCCTCACCCGAGACAATGC+AGG | - | tig0022071:8196-8215 | Msa1396750:intron | 55.0% | |
| TACCTGCATTGTCTCGGGTG+AGG | + | tig0022071:8201-8220 | None:intergenic | 55.0% | |
| TCACCCGAGACAATGCAGGT+AGG | - | tig0022071:8200-8219 | Msa1396750:intron | 55.0% | |
| CTGCCTACCTGCATTGTCTC+GGG | + | tig0022071:8206-8225 | None:intergenic | 55.0% | |
| GGGGATCTCGGGATTGGATA+CGG | - | tig0022071:9162-9181 | Msa1396750:intron | 55.0% | |
| GACTCCCTCGCACATCTCTT+AGG | - | tig0022071:9391-9410 | Msa1396750:intron | 55.0% | |
| TACGCTTTGTGCAGGGAACC+AGG | - | tig0022071:9981-10000 | Msa1396750:CDS | 55.0% | |
| TGCAGGGAACCAGGTCAAAC+AGG | - | tig0022071:9990-10009 | Msa1396750:CDS | 55.0% | |
| AGGGAACCAGGTCAAACAGG+TGG | - | tig0022071:9993-10012 | Msa1396750:CDS | 55.0% | |
| GAACCAGGTCAAACAGGTGG+AGG | - | tig0022071:9996-10015 | Msa1396750:CDS | 55.0% | |
| !! | AAGGCACTGCCCTACCTCAA+GGG | + | tig0022071:10351-10370 | None:intergenic | 55.0% |
| !! | TAAGGCACTGCCCTACCTCA+AGG | + | tig0022071:10352-10371 | None:intergenic | 55.0% |
| ATAGAGGGATGGGACCAGTC+AGG | + | tig0022071:10793-10812 | None:intergenic | 55.0% | |
| ! | GTATTCATGGCGGGGTATGG+CGG | + | tig0022071:10884-10903 | None:intergenic | 55.0% |
| ! | GTGGTATTCATGGCGGGGTA+TGG | + | tig0022071:10887-10906 | None:intergenic | 55.0% |
| !! | GACGGGGGAGGTTTTTAAGG+GGG | - | tig0022071:11035-11054 | Msa1396750:intron | 55.0% |
| !! | GAGGTTTTTAAGGGGGCAGC+TGG | - | tig0022071:11042-11061 | Msa1396750:intron | 55.0% |
| ! | TGCAGCGGTTGAGCGACTTT+TGG | - | tig0022071:11441-11460 | Msa1396750:intron | 55.0% |
| ! | GCAGCGGTTGAGCGACTTTT+GGG | - | tig0022071:11442-11461 | Msa1396750:intron | 55.0% |
| GGGAAACTCTGGACAGTAGC+AGG | - | tig0022071:11462-11481 | Msa1396750:intron | 55.0% | |
| !! | TGCTGATTTGGCAGGTGGGA+AGG | - | tig0022071:11815-11834 | Msa1396750:CDS | 55.0% |
| !! | GCTGATTTGGCAGGTGGGAA+GGG | - | tig0022071:11816-11835 | Msa1396750:CDS | 55.0% |
| CGCAACCGCTGAAACCACCA+CGG | - | tig0022071:5756-5775 | Msa1396750:three_prime_UTR | 60.0% | |
| TGGCTCCGTGGTGGTTTCAG+CGG | + | tig0022071:5764-5783 | None:intergenic | 60.0% | |
| ACGGAGCCACAATCCACCGA+CGG | - | tig0022071:5775-5794 | Msa1396750:three_prime_UTR | 60.0% | |
| !! | ACTCCTCCGTCGGTGGATTG+TGG | + | tig0022071:5784-5803 | None:intergenic | 60.0% |
| ! | GCCCCACCAGTTGTATTGGC+AGG | + | tig0022071:6982-7001 | None:intergenic | 60.0% |
| ! | GCTGCTGGTGCTAATGAGGG+TGG | - | tig0022071:7042-7061 | Msa1396750:intron | 60.0% |
| ! | GCTGGTGCTAATGAGGGTGG+GGG | - | tig0022071:7045-7064 | Msa1396750:intron | 60.0% |
| AATGGGATGGGAGGAGGTGG+TGG | - | tig0022071:7120-7139 | Msa1396750:intron | 60.0% | |
| GGACTCAAGGTGGCCAAACG+AGG | - | tig0022071:7559-7578 | Msa1396750:intron | 60.0% | |
| TGCCGAGCATCTGCAGCAGT+AGG | + | tig0022071:7853-7872 | None:intergenic | 60.0% | |
| !! | CAGCAGACACCCACTGGCTT+AGG | - | tig0022071:7871-7890 | Msa1396750:intron | 60.0% |
| !! | CAGACACCCACTGGCTTAGG+CGG | - | tig0022071:7874-7893 | Msa1396750:intron | 60.0% |
| !! | AGACACCCACTGGCTTAGGC+GGG | - | tig0022071:7875-7894 | Msa1396750:intron | 60.0% |
| GTGCCTCCACCTGTTTGACC+TGG | + | tig0022071:10002-10021 | None:intergenic | 60.0% | |
| ! | GGTCAAACAGGTGGAGGCAC+TGG | - | tig0022071:10002-10021 | Msa1396750:CDS | 60.0% |
| !! | GAGGCTCTGGGAAGACATCG+AGG | + | tig0022071:11318-11337 | None:intergenic | 60.0% |
| GGTTGCGTCACCTCCCATGG+CGG | + | tig0022071:5743-5762 | None:intergenic | 65.0% | |
| AGCGGTTGCGTCACCTCCCA+TGG | + | tig0022071:5746-5765 | None:intergenic | 65.0% | |
| !! | GGTGGATTGTGGCTCCGTGG+TGG | + | tig0022071:5773-5792 | None:intergenic | 65.0% |
| !! | GTCGGTGGATTGTGGCTCCG+TGG | + | tig0022071:5776-5795 | None:intergenic | 65.0% |
| GAGCCACAATCCACCGACGG+AGG | - | tig0022071:5778-5797 | Msa1396750:intron | 65.0% | |
| CCTGAAACGCGTCACCCGCA+TGG | + | tig0022071:6437-6456 | None:intergenic | 65.0% | |
| CCATGCGGGTGACGCGTTTC+AGG | - | tig0022071:6434-6453 | Msa1396750:CDS | 65.0% | |
| GGTGGGGGATTAGGAGGACC+TGG | - | tig0022071:7060-7079 | Msa1396750:intron | 65.0% | |
| CCAAGCCCGCCTAAGCCAGT+GGG | + | tig0022071:7883-7902 | None:intergenic | 65.0% | |
| ACCAAGCCCGCCTAAGCCAG+TGG | + | tig0022071:7884-7903 | None:intergenic | 65.0% | |
| GTCACCTCCCATGGCGGCGT+CGG | + | tig0022071:5737-5756 | None:intergenic | 70.0% | |
| GCTCGGCAGCAGACACCCAC+TGG | - | tig0022071:7865-7884 | Msa1396750:intron | 70.0% | |
| !! | CCCACTGGCTTAGGCGGGCT+TGG | - | tig0022071:7880-7899 | Msa1396750:intron | 70.0% |
| !! | CCATGGCGGCGTCGGTGGGA+GGG | + | tig0022071:5729-5748 | None:intergenic | 75.0% |
| CCTCCCACCGACGCCGCCAT+GGG | - | tig0022071:5727-5746 | Msa1396750:three_prime_UTR | 75.0% | |
| !! | CCTCCCATGGCGGCGTCGGT+GGG | + | tig0022071:5733-5752 | None:intergenic | 75.0% |
| ! | ACCTCCCATGGCGGCGTCGG+TGG | + | tig0022071:5734-5753 | None:intergenic | 75.0% |
| ! | CCCTCCCACCGACGCCGCCA+TGG | - | tig0022071:5726-5745 | Msa1396750:three_prime_UTR | 80.0% |
| !!! | CCCATGGCGGCGTCGGTGGG+AGG | + | tig0022071:5730-5749 | None:intergenic | 80.0% |
| ! | CCCACCGACGCCGCCATGGG+AGG | - | tig0022071:5730-5749 | Msa1396750:three_prime_UTR | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0022071 | gene | 5448 | 12175 | 5448 | ID=Msa1396750;Name=Msa1396750 |
| tig0022071 | mRNA | 5448 | 12175 | 5448 | ID=Msa1396750-mRNA-1;Parent=Msa1396750;Name=Msa1396750-mRNA-1;_AED=0.08;_eAED=0.08;_QI=297|1|1|1|0.87|0.77|9|350|542 |
| tig0022071 | exon | 5448 | 5794 | 5448 | ID=Msa1396750-mRNA-1:exon:15697;Parent=Msa1396750-mRNA-1 |
| tig0022071 | exon | 6140 | 6291 | 6140 | ID=Msa1396750-mRNA-1:exon:15696;Parent=Msa1396750-mRNA-1 |
| tig0022071 | exon | 6384 | 6473 | 6384 | ID=Msa1396750-mRNA-1:exon:15695;Parent=Msa1396750-mRNA-1 |
| tig0022071 | exon | 7600 | 7628 | 7600 | ID=Msa1396750-mRNA-1:exon:15694;Parent=Msa1396750-mRNA-1 |
| tig0022071 | exon | 8681 | 8739 | 8681 | ID=Msa1396750-mRNA-1:exon:15693;Parent=Msa1396750-mRNA-1 |
| tig0022071 | exon | 9406 | 9516 | 9406 | ID=Msa1396750-mRNA-1:exon:15692;Parent=Msa1396750-mRNA-1 |
| tig0022071 | exon | 9594 | 9808 | 9594 | ID=Msa1396750-mRNA-1:exon:15691;Parent=Msa1396750-mRNA-1 |
| tig0022071 | exon | 9948 | 10688 | 9948 | ID=Msa1396750-mRNA-1:exon:15690;Parent=Msa1396750-mRNA-1 |
| tig0022071 | exon | 11644 | 12175 | 11644 | ID=Msa1396750-mRNA-1:exon:15689;Parent=Msa1396750-mRNA-1 |
| tig0022071 | five_prime_UTR | 11879 | 12175 | 11879 | ID=Msa1396750-mRNA-1:five_prime_utr;Parent=Msa1396750-mRNA-1 |
| tig0022071 | CDS | 11644 | 11878 | 11644 | ID=Msa1396750-mRNA-1:cds;Parent=Msa1396750-mRNA-1 |
| tig0022071 | CDS | 9948 | 10688 | 9948 | ID=Msa1396750-mRNA-1:cds;Parent=Msa1396750-mRNA-1 |
| tig0022071 | CDS | 9594 | 9808 | 9594 | ID=Msa1396750-mRNA-1:cds;Parent=Msa1396750-mRNA-1 |
| tig0022071 | CDS | 9406 | 9516 | 9406 | ID=Msa1396750-mRNA-1:cds;Parent=Msa1396750-mRNA-1 |
| tig0022071 | CDS | 8681 | 8739 | 8681 | ID=Msa1396750-mRNA-1:cds;Parent=Msa1396750-mRNA-1 |
| tig0022071 | CDS | 7600 | 7628 | 7600 | ID=Msa1396750-mRNA-1:cds;Parent=Msa1396750-mRNA-1 |
| tig0022071 | CDS | 6384 | 6473 | 6384 | ID=Msa1396750-mRNA-1:cds;Parent=Msa1396750-mRNA-1 |
| tig0022071 | CDS | 6143 | 6291 | 6143 | ID=Msa1396750-mRNA-1:cds;Parent=Msa1396750-mRNA-1 |
| tig0022071 | three_prime_UTR | 6140 | 6142 | 6140 | ID=Msa1396750-mRNA-1:three_prime_utr;Parent=Msa1396750-mRNA-1 |
| tig0022071 | three_prime_UTR | 5448 | 5794 | 5448 | ID=Msa1396750-mRNA-1:three_prime_utr;Parent=Msa1396750-mRNA-1 |
| Gene Sequence |
| Protein sequence |
