Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0842260 | XP_003612971.3 | 76.963 | 382 | 87 | 1 | 600 | 981 | 290 | 670 | 0.0 | 618 |
Msa0842260 | XP_003612971.3 | 94.518 | 602 | 33 | 0 | 4 | 605 | 36 | 637 | 0.0 | 1177 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0842260 | sp|Q8RJP2|RHIE_DICD3 | 22.997 | 574 | 352 | 20 | 58 | 623 | 73 | 564 | 3.86e-27 | 121 |
Msa0842260 | sp|Q8RJP2|RHIE_DICD3 | 25.905 | 359 | 205 | 14 | 626 | 978 | 274 | 577 | 4.46e-18 | 92.8 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0842260 | A0A396HNJ7 | 76.963 | 382 | 87 | 1 | 600 | 981 | 290 | 670 | 0.0 | 618 |
Msa0842260 | A0A396HNJ7 | 94.518 | 602 | 33 | 0 | 4 | 605 | 36 | 637 | 0.0 | 1177 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0761430 | Msa0842260 | 0.805612 | 1.227553e-49 | -8.615850e-47 |
Msa0804350 | Msa0842260 | 0.858088 | 1.047129e-62 | -8.615850e-47 |
Msa0842030 | Msa0842260 | 0.804518 | 2.079119e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0842260 | MtrunA17_Chr5g0411781 | 94.518 | 602 | 33 | 0 | 4 | 605 | 36 | 637 | 0.0 | 1177 |
Msa0842260 | MtrunA17_Chr5g0411781 | 76.963 | 382 | 87 | 1 | 600 | 981 | 290 | 670 | 0.0 | 618 |
Msa0842260 | MtrunA17_Chr8g0367141 | 65.882 | 595 | 193 | 4 | 16 | 601 | 69 | 662 | 0.0 | 813 |
Msa0842260 | MtrunA17_Chr8g0367141 | 66.048 | 377 | 124 | 2 | 605 | 978 | 321 | 696 | 1.46e-171 | 517 |
Msa0842260 | MtrunA17_Chr8g0367111 | 63.710 | 620 | 204 | 7 | 5 | 605 | 38 | 655 | 0.0 | 801 |
Msa0842260 | MtrunA17_Chr8g0367111 | 63.185 | 383 | 133 | 4 | 605 | 981 | 308 | 688 | 9.20e-162 | 491 |
Msa0842260 | MtrunA17_Chr8g0367101 | 65.672 | 603 | 196 | 5 | 12 | 605 | 50 | 650 | 0.0 | 799 |
Msa0842260 | MtrunA17_Chr8g0367101 | 65.963 | 379 | 124 | 3 | 605 | 980 | 306 | 682 | 5.62e-161 | 489 |
Msa0842260 | MtrunA17_Chr3g0141191 | 54.915 | 590 | 253 | 6 | 26 | 605 | 33 | 619 | 0.0 | 650 |
Msa0842260 | MtrunA17_Chr3g0141191 | 54.308 | 383 | 172 | 2 | 600 | 980 | 270 | 651 | 2.52e-138 | 429 |
Msa0842260 | MtrunA17_Chr5g0427851 | 53.400 | 603 | 263 | 7 | 20 | 605 | 9 | 610 | 0.0 | 645 |
Msa0842260 | MtrunA17_Chr5g0427851 | 53.806 | 381 | 168 | 4 | 605 | 978 | 264 | 643 | 2.66e-136 | 424 |
Msa0842260 | MtrunA17_Chr3g0141181 | 51.597 | 595 | 272 | 7 | 24 | 605 | 13 | 604 | 0.0 | 630 |
Msa0842260 | MtrunA17_Chr3g0141181 | 51.295 | 386 | 184 | 3 | 600 | 982 | 255 | 639 | 1.05e-130 | 409 |
Msa0842260 | MtrunA17_Chr3g0141171 | 51.712 | 555 | 247 | 6 | 26 | 560 | 29 | 582 | 0.0 | 560 |
Msa0842260 | MtrunA17_Chr3g0141171 | 55.882 | 306 | 132 | 2 | 600 | 903 | 278 | 582 | 2.29e-106 | 343 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0842260 | AT2G22620.1 | 55.312 | 593 | 252 | 6 | 15 | 599 | 51 | 638 | 0.0 | 677 |
Msa0842260 | AT2G22620.1 | 56.728 | 379 | 161 | 2 | 605 | 981 | 300 | 677 | 9.47e-143 | 442 |
Msa0842260 | AT2G22620.3 | 55.312 | 593 | 252 | 6 | 15 | 599 | 51 | 638 | 0.0 | 677 |
Msa0842260 | AT2G22620.3 | 56.728 | 379 | 161 | 2 | 605 | 981 | 300 | 677 | 9.47e-143 | 442 |
Msa0842260 | AT1G09890.4 | 53.434 | 597 | 262 | 9 | 21 | 605 | 10 | 602 | 0.0 | 639 |
Msa0842260 | AT1G09890.4 | 55.091 | 383 | 167 | 5 | 600 | 979 | 253 | 633 | 3.07e-137 | 426 |
Msa0842260 | AT1G09890.1 | 53.729 | 590 | 257 | 9 | 28 | 605 | 1 | 586 | 0.0 | 635 |
Msa0842260 | AT1G09890.1 | 55.091 | 383 | 167 | 5 | 600 | 979 | 237 | 617 | 1.68e-137 | 426 |
Msa0842260 | AT1G09890.5 | 53.266 | 597 | 258 | 10 | 21 | 605 | 10 | 597 | 0.0 | 628 |
Msa0842260 | AT1G09890.5 | 55.091 | 383 | 167 | 5 | 600 | 979 | 248 | 628 | 3.67e-137 | 426 |
Msa0842260 | AT1G09890.3 | 51.369 | 621 | 262 | 10 | 21 | 605 | 10 | 626 | 0.0 | 625 |
Msa0842260 | AT1G09890.3 | 52.088 | 407 | 166 | 6 | 600 | 979 | 253 | 657 | 2.49e-132 | 414 |
Msa0842260 | AT1G09880.2 | 50.586 | 597 | 273 | 8 | 26 | 604 | 65 | 657 | 0.0 | 613 |
Msa0842260 | AT1G09880.2 | 50.388 | 387 | 187 | 3 | 600 | 982 | 307 | 692 | 3.85e-126 | 399 |
Msa0842260 | AT1G09880.3 | 50.586 | 597 | 273 | 8 | 26 | 604 | 79 | 671 | 0.0 | 613 |
Msa0842260 | AT1G09880.3 | 50.388 | 387 | 187 | 3 | 600 | 982 | 321 | 706 | 5.51e-126 | 399 |
Msa0842260 | AT1G09910.1 | 50.168 | 594 | 282 | 7 | 22 | 605 | 54 | 643 | 0.0 | 612 |
Msa0842260 | AT1G09910.1 | 51.175 | 383 | 183 | 3 | 600 | 980 | 295 | 675 | 6.28e-129 | 405 |
Msa0842260 | AT4G38030.1 | 50.592 | 591 | 267 | 10 | 23 | 600 | 51 | 629 | 0.0 | 612 |
Msa0842260 | AT4G38030.1 | 53.665 | 382 | 171 | 4 | 600 | 979 | 288 | 665 | 2.70e-133 | 417 |
Msa0842260 | AT1G09880.4 | 50.586 | 597 | 273 | 8 | 26 | 604 | 33 | 625 | 0.0 | 612 |
Msa0842260 | AT1G09880.4 | 50.388 | 387 | 187 | 3 | 600 | 982 | 275 | 660 | 1.43e-126 | 399 |
Msa0842260 | AT1G09910.3 | 50.168 | 594 | 282 | 7 | 22 | 605 | 11 | 600 | 0.0 | 612 |
Msa0842260 | AT1G09910.3 | 51.175 | 383 | 183 | 3 | 600 | 980 | 252 | 632 | 2.15e-129 | 405 |
Msa0842260 | AT1G09910.2 | 50.168 | 594 | 282 | 7 | 22 | 605 | 11 | 600 | 0.0 | 612 |
Msa0842260 | AT1G09910.2 | 51.175 | 383 | 183 | 3 | 600 | 980 | 252 | 632 | 2.15e-129 | 405 |
Msa0842260 | AT4G37950.2 | 52.073 | 603 | 264 | 10 | 12 | 599 | 47 | 639 | 0.0 | 612 |
Msa0842260 | AT4G37950.2 | 53.506 | 385 | 170 | 4 | 600 | 979 | 296 | 676 | 2.31e-131 | 412 |
Msa0842260 | AT4G37950.1 | 52.073 | 603 | 264 | 10 | 12 | 599 | 47 | 639 | 0.0 | 612 |
Msa0842260 | AT4G37950.1 | 53.506 | 385 | 170 | 4 | 600 | 979 | 296 | 676 | 2.31e-131 | 412 |
Msa0842260 | AT1G09880.1 | 50.420 | 595 | 273 | 8 | 28 | 604 | 1 | 591 | 0.0 | 607 |
Msa0842260 | AT1G09880.1 | 50.388 | 387 | 187 | 3 | 600 | 982 | 241 | 626 | 9.85e-127 | 398 |
Msa0842260 | AT4G24430.1 | 51.639 | 610 | 273 | 10 | 13 | 605 | 4 | 608 | 0.0 | 603 |
Msa0842260 | AT4G24430.1 | 51.918 | 391 | 180 | 6 | 595 | 978 | 250 | 639 | 5.46e-126 | 397 |
Msa0842260 | AT2G22620.4 | 55.969 | 511 | 214 | 4 | 15 | 518 | 51 | 557 | 0.0 | 601 |
Msa0842260 | AT2G22620.4 | 57.752 | 258 | 107 | 1 | 605 | 860 | 300 | 557 | 2.41e-99 | 323 |
Msa0842260 | AT2G22620.2 | 58.889 | 450 | 179 | 4 | 153 | 599 | 112 | 558 | 0.0 | 555 |
Msa0842260 | AT2G22620.2 | 56.728 | 379 | 161 | 2 | 605 | 981 | 220 | 597 | 8.12e-144 | 442 |
Msa0842260 | AT1G09890.2 | 51.589 | 535 | 221 | 8 | 20 | 519 | 9 | 540 | 0.0 | 546 |
Msa0842260 | AT1G09890.2 | 52.595 | 289 | 109 | 5 | 600 | 861 | 253 | 540 | 3.42e-90 | 298 |
Msa0842260 | AT4G24430.2 | 52.941 | 493 | 221 | 7 | 121 | 605 | 1 | 490 | 2.36e-174 | 518 |
Msa0842260 | AT4G24430.2 | 52.368 | 380 | 174 | 5 | 605 | 978 | 143 | 521 | 4.89e-127 | 395 |
Msa0842260 | AT2G22620.5 | 52.900 | 431 | 190 | 5 | 15 | 438 | 51 | 475 | 6.92e-153 | 461 |
Msa0842260 | AT2G22620.5 | 49.438 | 178 | 86 | 2 | 605 | 780 | 300 | 475 | 7.02e-49 | 181 |
Msa0842260 | AT1G65210.1 | 57.754 | 187 | 77 | 2 | 793 | 979 | 62 | 246 | 1.06e-62 | 213 |
Msa0842260 | AT1G65210.1 | 56.291 | 151 | 63 | 3 | 451 | 600 | 62 | 210 | 1.74e-47 | 170 |
Find 235 sgRNAs with CRISPR-Local
Find 475 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCCATCTAATCCTCAATTTA+AGG | 0.128371 | 5_4:+19272867 | Msa0842260:CDS |
GGCCCAACTGTTTGGGAAAT+TGG | 0.140397 | 5_4:+19274486 | Msa0842260:CDS |
GGCCCAACTCTTTGGGAAAT+TGG | 0.140942 | 5_4:+19278174 | Msa0842260:CDS |
ATTCACAGGGCTATCAATTT+TGG | 0.141260 | 5_4:+19273999 | Msa0842260:intron |
AATCACAGGGATATCAATTT+TGG | 0.158845 | 5_4:+19277670 | Msa0842260:intron |
TTACCTGGTTTAATTGTAAT+TGG | 0.186445 | 5_4:-19274130 | None:intergenic |
CACCTTTGGTCTATGTTTAT+AGG | 0.189602 | 5_4:-19272365 | None:intergenic |
TCTTATAAGTCTCTCCTTCT+TGG | 0.225852 | 5_4:-19277048 | None:intergenic |
TTTGATTGAATAAAATTATA+AGG | 0.246769 | 5_4:-19273663 | None:intergenic |
TATGATAGGTTTAGGCAATA+TGG | 0.247971 | 5_4:+19278469 | Msa0842260:intron |
CAAACAGTTGGGCCATTTCT+TGG | 0.250334 | 5_4:-19274477 | None:intergenic |
CAAAGAGTTGGGCCATTTCT+TGG | 0.250334 | 5_4:-19278165 | None:intergenic |
CAAGAAATGGCCCAACTCTT+TGG | 0.256182 | 5_4:+19278166 | Msa0842260:CDS |
AACTTGTTTGCATGGGTTCC+TGG | 0.258856 | 5_4:+19274079 | Msa0842260:CDS |
AACTTGTTTGCATGGGTTCC+TGG | 0.258856 | 5_4:+19277750 | Msa0842260:CDS |
ACCTTTGGTCTATGTTTATA+GGG | 0.259445 | 5_4:-19272364 | None:intergenic |
ATTGTGAGAAAAGGCGATTC+TGG | 0.267516 | 5_4:+19272522 | Msa0842260:CDS |
TTATAACAAAGTTTCCATTT+TGG | 0.284242 | 5_4:-19274033 | None:intergenic |
CTCTCCTTCTTGGAATTCTA+TGG | 0.285525 | 5_4:-19277038 | None:intergenic |
TCCATTACTTTGGCAAATCC+TGG | 0.288499 | 5_4:+19271879 | Msa0842260:CDS |
AAGGGCATGGAGTTCTTCTA+TGG | 0.291408 | 5_4:+19272328 | Msa0842260:CDS |
CCCTTAAATTGAGGATTAGA+TGG | 0.309866 | 5_4:-19272868 | None:intergenic |
CTATTAAAGTTGGTCAAATA+AGG | 0.318100 | 5_4:+19272589 | Msa0842260:CDS |
CAAGAAATGGCCCAACTGTT+TGG | 0.318768 | 5_4:+19274478 | Msa0842260:CDS |
AGAAGGAGAGACTTATAAAA+AGG | 0.318951 | 5_4:+19273435 | Msa0842260:CDS |
GGTTTAGGCAATATGGGTTA+TGG | 0.320524 | 5_4:+19278476 | Msa0842260:intron |
TACATTGGTCTAGCTAGGCC+TGG | 0.324338 | 5_4:+19277520 | Msa0842260:CDS |
GGACTTGTAAATGTCCGGTT+AGG | 0.325730 | 5_4:-19273716 | None:intergenic |
TTAATAGCAGGAAATCCTTT+TGG | 0.329990 | 5_4:-19272573 | None:intergenic |
TGCATGCAGCTTCAACTATA+TGG | 0.332495 | 5_4:+19272750 | Msa0842260:intron |
AGTTAGTTACCTGGCTTCCT+TGG | 0.333504 | 5_4:-19272625 | None:intergenic |
ATGGAATCCATGGATTATAT+TGG | 0.336026 | 5_4:+19275457 | Msa0842260:CDS |
ATGAATACTTGGTACTTCTA+TGG | 0.336382 | 5_4:-19275487 | None:intergenic |
CTAGCTAGGCCTGGGGCTGC+AGG | 0.336480 | 5_4:+19277529 | Msa0842260:CDS |
AACCAGGACAACCAAGTTAA+TGG | 0.337005 | 5_4:+19273074 | Msa0842260:CDS |
GTCTTAGGAATATCATATTC+TGG | 0.344765 | 5_4:+19271909 | Msa0842260:CDS |
AAGATCAATTTAAATCTCTA+TGG | 0.348047 | 5_4:+19273500 | Msa0842260:CDS |
GTTAGGGTTCCACGTTGATT+AGG | 0.350575 | 5_4:-19273699 | None:intergenic |
AAGTCTCTCCTTCTTCGAAT+TGG | 0.351343 | 5_4:-19273426 | None:intergenic |
TGCCATGATCCTGCAGCCCC+AGG | 0.351937 | 5_4:-19277538 | None:intergenic |
TACATTGGTCTAGCTTGGCC+TGG | 0.352021 | 5_4:+19273868 | Msa0842260:CDS |
TGGACTAGAGCAGACCAAAA+TGG | 0.352907 | 5_4:+19274019 | Msa0842260:CDS |
TACCTGCACTTCAGCATTAG+AGG | 0.353948 | 5_4:-19275084 | None:intergenic |
ATATGGCAATATCAGATATT+AGG | 0.356406 | 5_4:+19272767 | Msa0842260:CDS |
GCATGGGTTCCTGGCTATAT+TGG | 0.358022 | 5_4:+19274088 | Msa0842260:CDS |
TATGATAGGTTTAGGCAATA+TGG | 0.358897 | 5_4:+19274775 | Msa0842260:intron |
AAGAAATGGCCCAACTCTTT+GGG | 0.362239 | 5_4:+19278167 | Msa0842260:CDS |
GGAAATAAAGATGATGATAG+AGG | 0.373423 | 5_4:+19271954 | Msa0842260:CDS |
AAGATCAATTTAAATCTCTA+TGG | 0.376150 | 5_4:+19277116 | Msa0842260:CDS |
ATCCATTAACTTGGTTGTCC+TGG | 0.376723 | 5_4:-19273076 | None:intergenic |
TGAAGTACCTAGTGTTCATT+TGG | 0.377438 | 5_4:+19279051 | Msa0842260:CDS |
AAGAAATGGCCCAACTGTTT+GGG | 0.377978 | 5_4:+19274479 | Msa0842260:CDS |
GGTTTAGGCAATATGGTCTA+TGG | 0.378350 | 5_4:+19274782 | Msa0842260:intron |
TACTTTACAACAAATCAAAT+AGG | 0.379385 | 5_4:+19278971 | Msa0842260:CDS |
GTTTAGGCAATATGGGTTAT+GGG | 0.379810 | 5_4:+19278477 | Msa0842260:CDS |
CTAGCTTGGCCTGGGGATGC+AGG | 0.388413 | 5_4:+19273877 | Msa0842260:CDS |
TGCCATGATCCTGCATCCCC+AGG | 0.390903 | 5_4:-19273886 | None:intergenic |
GTTAATGTTCCCCGTAGATT+AGG | 0.390980 | 5_4:-19277314 | None:intergenic |
ATTTGATTTGTTGTAAAGTA+AGG | 0.391997 | 5_4:-19278968 | None:intergenic |
TACGAGTGAATTCAAGTTGA+TGG | 0.396239 | 5_4:-19274445 | None:intergenic |
CCATTACTTTGGCAAATCCT+GGG | 0.398367 | 5_4:+19271880 | Msa0842260:CDS |
TTTGATTGAGGGAAATCATA+AGG | 0.400882 | 5_4:-19277278 | None:intergenic |
TATTCTCTTTGTTGTGAAGT+AGG | 0.402262 | 5_4:-19275409 | None:intergenic |
TGTTCATGAGGTTAGGATAA+GGG | 0.403330 | 5_4:-19278236 | None:intergenic |
AGAAGTACCAAGTATTCATT+TGG | 0.404454 | 5_4:+19275491 | Msa0842260:CDS |
ACATTGGTCTAGCTTGGCCT+GGG | 0.407469 | 5_4:+19273869 | Msa0842260:CDS |
ATGATAGGTTTAGGCAATAT+GGG | 0.407942 | 5_4:+19278470 | Msa0842260:intron |
GTTAGTTACCTGGCTTCCTT+GGG | 0.409083 | 5_4:-19272624 | None:intergenic |
ATTCTCTTTGTTGTGAAGTA+GGG | 0.410957 | 5_4:-19275408 | None:intergenic |
AACTTACAGAGAGGCAAGTT+GGG | 0.416244 | 5_4:-19273205 | None:intergenic |
AATTCTCCAGCTGAGCGATC+TGG | 0.416473 | 5_4:-19274513 | None:intergenic |
GGTTTAGAGACTAACTGGTC+TGG | 0.418159 | 5_4:-19274591 | None:intergenic |
TATAATCTGTTCATGAGGTT+AGG | 0.420286 | 5_4:-19278243 | None:intergenic |
GTATATAATCCTCCAAGAAA+TGG | 0.421151 | 5_4:+19278153 | Msa0842260:CDS |
TGTGTTAAGAGAACAGCTTC+AGG | 0.421768 | 5_4:-19272844 | None:intergenic |
CCATCTAATCCTCAATTTAA+GGG | 0.426267 | 5_4:+19272868 | Msa0842260:CDS |
AATCTACGGGGAACATTAAC+GGG | 0.427018 | 5_4:+19277317 | Msa0842260:CDS |
ACATTGGTCTAGCTAGGCCT+GGG | 0.427274 | 5_4:+19277521 | Msa0842260:CDS |
AATTCTCCAGCTGAGCGATC+TGG | 0.427498 | 5_4:-19278201 | None:intergenic |
GTATATAATCCTCCAAGAAA+TGG | 0.429167 | 5_4:+19274465 | Msa0842260:CDS |
GATGTGAGATCTTGCTTAAC+GGG | 0.429375 | 5_4:-19273173 | None:intergenic |
TATAGGTATATTGTGAGAAA+AGG | 0.431136 | 5_4:+19272513 | Msa0842260:intron |
GAATTCAAGTAAACAAAGAT+AGG | 0.433996 | 5_4:-19273466 | None:intergenic |
GAATTCAAGTAAACAAAGAT+AGG | 0.433996 | 5_4:-19277082 | None:intergenic |
GTGTAAACAAGATCATGATA+TGG | 0.434630 | 5_4:-19278520 | None:intergenic |
TAATCTACGGGGAACATTAA+CGG | 0.436411 | 5_4:+19277316 | Msa0842260:CDS |
TTGATAAATATCAAAAGGAT+TGG | 0.438526 | 5_4:+19278551 | Msa0842260:CDS |
GGATTTCCTGCTATTAAAGT+TGG | 0.439977 | 5_4:+19272579 | Msa0842260:CDS |
ATGAGGTTAGGATAAGGGTT+TGG | 0.441026 | 5_4:-19278231 | None:intergenic |
AATCAACGTGGAACCCTAAC+CGG | 0.443227 | 5_4:+19273702 | Msa0842260:CDS |
CTGTTCATGAGGTTAGGATA+AGG | 0.445399 | 5_4:-19278237 | None:intergenic |
TAATCTTCCATGTGGTTGCT+TGG | 0.451831 | 5_4:-19278697 | None:intergenic |
GTCTTGGACTTGTAAATGTC+CGG | 0.451859 | 5_4:-19273721 | None:intergenic |
ACGAGGTTAGCGTAAGGCTT+TGG | 0.452758 | 5_4:-19274543 | None:intergenic |
GGCCTGGGGATGCAGGATCA+TGG | 0.454305 | 5_4:+19273884 | Msa0842260:CDS |
ACTTGCAGAAGAAGCGTAAG+AGG | 0.454799 | 5_4:+19271446 | Msa0842260:intron |
GGTCATACAACTTGTTTGCA+TGG | 0.455272 | 5_4:+19274071 | Msa0842260:CDS |
CAGGATCTTGTTTACACAGT+TGG | 0.455563 | 5_4:+19274832 | Msa0842260:CDS |
TGCCAATTTCCCAAAGAGTT+GGG | 0.456210 | 5_4:-19278176 | None:intergenic |
CTGTAATCCATCCATTAACT+TGG | 0.457832 | 5_4:-19273085 | None:intergenic |
GTGACCGAAGATTGAGCATT+GGG | 0.461228 | 5_4:-19271473 | None:intergenic |
GTTACCTCTCCCTTAAATTG+AGG | 0.461821 | 5_4:-19272877 | None:intergenic |
GACTTGTAAATGTCCGGTTA+GGG | 0.463817 | 5_4:-19273715 | None:intergenic |
ATCATGATATGGATATAAAT+CGG | 0.465529 | 5_4:-19278509 | None:intergenic |
GGCCTGGGGCTGCAGGATCA+TGG | 0.467779 | 5_4:+19277536 | Msa0842260:CDS |
CATGATCTTGTTTACACTGT+TGG | 0.471992 | 5_4:+19278526 | Msa0842260:CDS |
GTGATATTTGAACGACCAAA+AGG | 0.472223 | 5_4:+19272558 | Msa0842260:CDS |
TGCCAATTTCCCAAACAGTT+GGG | 0.472457 | 5_4:-19274488 | None:intergenic |
ATTTGACCAACTTTAATAGC+AGG | 0.472820 | 5_4:-19272585 | None:intergenic |
TACATCTTTGCCAGCATAGT+GGG | 0.473348 | 5_4:-19277014 | None:intergenic |
GGCATTCCAGATCGCTCAGC+TGG | 0.474004 | 5_4:+19274507 | Msa0842260:CDS |
GGCATTCCAGATCGCTCAGC+TGG | 0.474004 | 5_4:+19278195 | Msa0842260:CDS |
TGTTGTGAAGTAGGGAGGAT+TGG | 0.476508 | 5_4:-19275400 | None:intergenic |
GTCATACAACTTGTTTGCAT+GGG | 0.477226 | 5_4:+19274072 | Msa0842260:CDS |
TGGTGTTGATAAATATCAAA+AGG | 0.477862 | 5_4:+19278546 | Msa0842260:CDS |
TTGGTTGTCCTGGTTCTCCA+TGG | 0.478816 | 5_4:-19273066 | None:intergenic |
GTGTATACAACTTGTTTGCA+TGG | 0.479696 | 5_4:+19277742 | Msa0842260:CDS |
CCCAGGATTTGCCAAAGTAA+TGG | 0.482022 | 5_4:-19271880 | None:intergenic |
CAGCATTAGAGGCACTTGCT+AGG | 0.490093 | 5_4:-19275073 | None:intergenic |
TCGTTAATGTATACCCGTCT+TGG | 0.490306 | 5_4:-19273737 | None:intergenic |
CATTACTTTGGCAAATCCTG+GGG | 0.490828 | 5_4:+19271881 | Msa0842260:CDS |
ATGCCAATTTCCCAAAGAGT+TGG | 0.492669 | 5_4:-19278177 | None:intergenic |
ATGGAAAATGTACTTGAAGC+TGG | 0.493707 | 5_4:+19271933 | Msa0842260:CDS |
ATGCCAATTTCCCAAACAGT+TGG | 0.493759 | 5_4:-19274489 | None:intergenic |
TGCCTCTAATGCTGAAGTGC+AGG | 0.498076 | 5_4:+19275082 | Msa0842260:CDS |
AATTACCATTGCAGAGTCCA+TGG | 0.499028 | 5_4:+19272251 | Msa0842260:intron |
ATGGTCAGATGCTAAACAAA+AGG | 0.499497 | 5_4:+19277135 | Msa0842260:CDS |
GCATGGGTTCCTGGCTACAT+TGG | 0.500062 | 5_4:+19277759 | Msa0842260:CDS |
CCTTTCACCAAATGAACACT+AGG | 0.500378 | 5_4:-19279058 | None:intergenic |
TTTGTAAGCTCCCACTATGC+TGG | 0.501512 | 5_4:+19273388 | Msa0842260:CDS |
ATGGACAGATGCTAAACAAA+AGG | 0.504220 | 5_4:+19273519 | Msa0842260:CDS |
TACGTCTTTGCCAGCATAGT+GGG | 0.506806 | 5_4:-19273398 | None:intergenic |
ATTCAAGTATTGGTAGTTGA+AGG | 0.507569 | 5_4:-19279163 | None:intergenic |
ATTGCCCAATGCTCAATCTT+CGG | 0.508167 | 5_4:+19271469 | Msa0842260:CDS |
ATACCAAGGCATGGAATCCA+TGG | 0.511293 | 5_4:+19275447 | Msa0842260:CDS |
ATACCTAGGCATGGAATCCA+TGG | 0.511293 | 5_4:+19279007 | Msa0842260:CDS |
AGAAGGAGAGACTTATAAGA+AGG | 0.514031 | 5_4:+19277051 | Msa0842260:CDS |
CTCTTTGTTGTGAAGTAGGG+AGG | 0.516658 | 5_4:-19275405 | None:intergenic |
TTTATGAGCACCCACTATGC+TGG | 0.516937 | 5_4:+19277004 | Msa0842260:CDS |
AGATGTGAGATCTTGCTTAA+CGG | 0.517376 | 5_4:-19273174 | None:intergenic |
GAACTTACAGAGAGGCAAGT+TGG | 0.518644 | 5_4:-19273206 | None:intergenic |
GACATTTACAAGTCCAAGAC+GGG | 0.518790 | 5_4:+19273724 | Msa0842260:CDS |
ATGCATACATTGGTCTAGCT+TGG | 0.520047 | 5_4:+19273863 | Msa0842260:CDS |
AGATATTAGGCAAAGAAGAA+TGG | 0.520707 | 5_4:+19272780 | Msa0842260:CDS |
ATGGATATAAATCGGTGTAA+TGG | 0.521708 | 5_4:-19278501 | None:intergenic |
ATGGATTCCATGCCTTGGTA+TGG | 0.521822 | 5_4:-19275445 | None:intergenic |
AGCATTAGAGGCACTTGCTA+GGG | 0.522110 | 5_4:-19275072 | None:intergenic |
CCTAGTGTTCATTTGGTGAA+AGG | 0.522899 | 5_4:+19279058 | Msa0842260:CDS |
ATGGAATCCATGGATTGTAT+TGG | 0.525539 | 5_4:+19279017 | Msa0842260:CDS |
TGCTGCTAATGCTGAACTGC+AGG | 0.525967 | 5_4:+19278781 | Msa0842260:CDS |
AATCACACACATTCAAGTAT+TGG | 0.528677 | 5_4:-19279173 | None:intergenic |
TGTAGGAAGCACCATGCACT+TGG | 0.530253 | 5_4:+19278122 | Msa0842260:intron |
GTTTAGAGACTAACTGGTCT+GGG | 0.531581 | 5_4:-19274590 | None:intergenic |
CTCTCCTTCTTCGAATTGGA+TGG | 0.533026 | 5_4:-19273422 | None:intergenic |
AAATCGTGAAAATTCTCAGC+AGG | 0.533726 | 5_4:+19271499 | Msa0842260:CDS |
TCAATACTCCATGGAGAACC+AGG | 0.539835 | 5_4:+19273058 | Msa0842260:CDS |
TATCGAATGAAGTCAAAAGT+TGG | 0.541219 | 5_4:+19277255 | Msa0842260:CDS |
TGATTTGTTGTAAAGTAAGG+AGG | 0.542159 | 5_4:-19278965 | None:intergenic |
TAATCCTCAATTTAAGGGAG+AGG | 0.542455 | 5_4:+19272873 | Msa0842260:CDS |
CTGTAATCTCCAATGTAGCC+AGG | 0.543078 | 5_4:-19277768 | None:intergenic |
ATGGATTCCATGCCTAGGTA+TGG | 0.543118 | 5_4:-19279005 | None:intergenic |
ACAGTTGGGCCATTTCTTGG+AGG | 0.543249 | 5_4:-19274474 | None:intergenic |
AGGAATATCATATTCTGGAA+TGG | 0.543447 | 5_4:+19271914 | Msa0842260:CDS |
TTTCAGGTGGTGATTAGCAA+TGG | 0.543809 | 5_4:+19271849 | Msa0842260:intron |
TACTTCACAACAAAGAGAAT+AGG | 0.544075 | 5_4:+19275411 | Msa0842260:CDS |
CTACATCTTTGCCAGCATAG+TGG | 0.545256 | 5_4:-19277015 | None:intergenic |
ATTCTTACATTGGTCTAGCT+AGG | 0.545919 | 5_4:+19277515 | Msa0842260:CDS |
TAAACAACCAATATAATCCA+TGG | 0.550594 | 5_4:-19275464 | None:intergenic |
GATTAATAGGTACTTTGATG+TGG | 0.551487 | 5_4:+19272095 | Msa0842260:intron |
AATCCATGGATTCCATGCCT+TGG | 0.552884 | 5_4:-19275450 | None:intergenic |
CTACGTCTTTGCCAGCATAG+TGG | 0.552968 | 5_4:-19273399 | None:intergenic |
AGGGTTCCACGTTGATTAGG+TGG | 0.553836 | 5_4:-19273696 | None:intergenic |
AATTATATATGCAGGAGCAC+AGG | 0.554184 | 5_4:+19274966 | Msa0842260:intron |
AACACAGAACGAGAATATAG+TGG | 0.554593 | 5_4:+19272292 | Msa0842260:CDS |
CAGCATTAGCAGCACTTGCA+AGG | 0.557190 | 5_4:-19278772 | None:intergenic |
TGTATACAACTTGTTTGCAT+GGG | 0.558248 | 5_4:+19277743 | Msa0842260:CDS |
TTGTAATCTCCAATATAGCC+AGG | 0.558313 | 5_4:-19274097 | None:intergenic |
TATCGACTGAACTCAAAAGT+TGG | 0.559908 | 5_4:+19273640 | Msa0842260:CDS |
AGGGCATGGAGTTCTTCTAT+GGG | 0.567553 | 5_4:+19272329 | Msa0842260:CDS |
AGCATTAGCAGCACTTGCAA+GGG | 0.568661 | 5_4:-19278771 | None:intergenic |
CCATTGCGGAACTCATTACT+CGG | 0.568971 | 5_4:-19273146 | None:intergenic |
TATACAACCAATACAATCCA+TGG | 0.569693 | 5_4:-19279024 | None:intergenic |
AGTGACCGAAGATTGAGCAT+TGG | 0.570391 | 5_4:-19271474 | None:intergenic |
GATGTTTACATGTCCAAGAC+CGG | 0.581570 | 5_4:+19277339 | Msa0842260:CDS |
GTAGCCATCCAATTCGAAGA+AGG | 0.581707 | 5_4:+19273418 | Msa0842260:CDS |
TTAGTGACTATCGAAAGGAT+TGG | 0.584024 | 5_4:+19274857 | Msa0842260:CDS |
ATCATGGCAGAGAGAAAGCA+AGG | 0.584093 | 5_4:+19273900 | Msa0842260:CDS |
AGTAATGAGTTCCGCAATGG+TGG | 0.585879 | 5_4:+19273149 | Msa0842260:CDS |
AATGCTAAGAATGCATACAT+TGG | 0.588205 | 5_4:+19273853 | Msa0842260:CDS |
ACTGGTATATACAGGATCAC+AGG | 0.588720 | 5_4:+19278662 | Msa0842260:intron |
TATGCTAAGAATTCTTACAT+TGG | 0.589980 | 5_4:+19277505 | Msa0842260:CDS |
AGAGTTGGGCCATTTCTTGG+AGG | 0.590167 | 5_4:-19278162 | None:intergenic |
TGACAAATATCAATACTCCA+TGG | 0.594273 | 5_4:+19273049 | Msa0842260:CDS |
GATAATGCCATACCAAGGCA+TGG | 0.596345 | 5_4:+19275438 | Msa0842260:CDS |
TTGGATATAATTCACTGTAA+CGG | 0.596441 | 5_4:-19274807 | None:intergenic |
AGGACAACCAAGTTAATGGA+TGG | 0.599745 | 5_4:+19273078 | Msa0842260:CDS |
TACAAGTGAATCCAAGTGCA+TGG | 0.600543 | 5_4:-19278133 | None:intergenic |
TGGTGTTAGTGACTATCGAA+AGG | 0.601145 | 5_4:+19274852 | Msa0842260:CDS |
GAAATAAAGATGATGATAGA+GGG | 0.602750 | 5_4:+19271955 | Msa0842260:CDS |
CGACTGAGAAACTTGTCCCA+TGG | 0.602865 | 5_4:-19272268 | None:intergenic |
AATCCATGGATTCCATGCCT+AGG | 0.606105 | 5_4:-19279010 | None:intergenic |
GAACATGGTGCTGTAATAAG+TGG | 0.609088 | 5_4:+19275029 | Msa0842260:CDS |
TTCAAATATAATCTTCCATG+TGG | 0.609462 | 5_4:-19278705 | None:intergenic |
ATAAATTTCAAGCAACCACA+TGG | 0.612722 | 5_4:+19274994 | Msa0842260:CDS |
ATTACCATTGCAGAGTCCAT+GGG | 0.612929 | 5_4:+19272252 | Msa0842260:intron |
CAGTGAATTATATCCAACTC+AGG | 0.615215 | 5_4:+19274813 | Msa0842260:CDS |
TTCAAATATAATCTTCCATG+TGG | 0.615855 | 5_4:-19275009 | None:intergenic |
CTGTTCACGAGGTTAGCGTA+AGG | 0.616934 | 5_4:-19274549 | None:intergenic |
GATAGTGCCATACCTAGGCA+TGG | 0.617720 | 5_4:+19278998 | Msa0842260:CDS |
CAAGATCTCACATCTCATGT+TGG | 0.624859 | 5_4:+19273182 | Msa0842260:CDS |
CATTGGTCTAGCTTGGCCTG+GGG | 0.625777 | 5_4:+19273870 | Msa0842260:CDS |
TCCCTATAAACATAGACCAA+AGG | 0.628590 | 5_4:+19272363 | Msa0842260:CDS |
AAACACTCCAAGCAACCACA+TGG | 0.631664 | 5_4:+19278690 | Msa0842260:CDS |
GTGTAAACAAGATCCTGAGT+TGG | 0.634528 | 5_4:-19274826 | None:intergenic |
GGACATTTACAAGTCCAAGA+CGG | 0.637789 | 5_4:+19273723 | Msa0842260:CDS |
ATTACTTTGGCAAATCCTGG+GGG | 0.637961 | 5_4:+19271882 | Msa0842260:CDS |
CCGAGTAATGAGTTCCGCAA+TGG | 0.639316 | 5_4:+19273146 | Msa0842260:CDS |
TCAACGAAAGATAGAGATGA+CGG | 0.641457 | 5_4:+19272805 | Msa0842260:CDS |
TCTCCAATTACAATTAAACC+AGG | 0.641476 | 5_4:+19274127 | Msa0842260:CDS |
GAGATGATAGTGCCATACCT+AGG | 0.643528 | 5_4:+19278993 | Msa0842260:CDS |
GCAAACAAGTTGTATACACC+AGG | 0.645916 | 5_4:-19277738 | None:intergenic |
TGGAAGATTATATTTGAACA+TGG | 0.652999 | 5_4:+19275014 | Msa0842260:CDS |
GCTTAACGGGTCCACCATTG+CGG | 0.655063 | 5_4:-19273160 | None:intergenic |
GCAAACAAGTTGTATGACCC+AGG | 0.663552 | 5_4:-19274067 | None:intergenic |
TTGTGAATAATCTGTTCACG+AGG | 0.667192 | 5_4:-19274560 | None:intergenic |
CATTGGTCTAGCTAGGCCTG+GGG | 0.670641 | 5_4:+19277522 | Msa0842260:CDS |
GTAGCCATAGAATTCCAAGA+AGG | 0.671086 | 5_4:+19277034 | Msa0842260:CDS |
GATGAAATCATCATTAAACA+AGG | 0.671581 | 5_4:+19277798 | Msa0842260:CDS |
CTTGAAAATGATGTATTGAG+TGG | 0.676762 | 5_4:+19278728 | Msa0842260:CDS |
TTACTTTGGCAAATCCTGGG+GGG | 0.691393 | 5_4:+19271883 | Msa0842260:CDS |
GAGATGATAATGCCATACCA+AGG | 0.698348 | 5_4:+19275433 | Msa0842260:CDS |
ACAGAACGAGAATATAGTGG+AGG | 0.712115 | 5_4:+19272295 | Msa0842260:CDS |
TTTGGTGAAAGGAAGCAACA+CGG | 0.712178 | 5_4:+19279069 | Msa0842260:CDS |
TTCATTCCACCTAATCAACG+TGG | 0.715096 | 5_4:+19273690 | Msa0842260:CDS |
TTTGTTCGACCTAATCTACG+GGG | 0.768985 | 5_4:+19277305 | Msa0842260:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATTCTTAATTATATTATTG+TGG | + | chr5_4:19271613-19271632 | Msa0842260:intron | 10.0% |
!! | GAATTTATTTAATAAGAAAT+AGG | - | chr5_4:19271983-19272002 | None:intergenic | 10.0% |
!!! | AAATAAATTCTATTCAATTT+TGG | + | chr5_4:19271993-19272012 | Msa0842260:intron | 10.0% |
!! | TTTGATTGAATAAAATTATA+AGG | - | chr5_4:19273666-19273685 | None:intergenic | 10.0% |
!!! | ATAACAAGATAATATTTTAA+AGG | - | chr5_4:19275162-19275181 | None:intergenic | 10.0% |
!!! | TTTATCTTTATTTTTACATT+CGG | + | chr5_4:19276101-19276120 | Msa0842260:intron | 10.0% |
!! | TTTCAATTTAAAAAAACCAA+CGG | + | chr5_4:19271279-19271298 | Msa0842260:intron | 15.0% |
!!! | TAGTAAAGAAATATTTTGAT+TGG | + | chr5_4:19271589-19271608 | Msa0842260:intron | 15.0% |
!!! | AAATTTTCTTAATGATTTTC+AGG | + | chr5_4:19271833-19271852 | Msa0842260:intron | 15.0% |
!!! | TTTTATTTTATCAGTGAAAT+TGG | - | chr5_4:19273314-19273333 | None:intergenic | 15.0% |
!! | TTATAAAAAATATTGTACCT+GGG | + | chr5_4:19274050-19274069 | Msa0842260:CDS | 15.0% |
!!! | TGTGATATTATTTTGATTAT+TGG | - | chr5_4:19274173-19274192 | None:intergenic | 15.0% |
!! | TGAAATATATATTCTATGAT+AGG | + | chr5_4:19274761-19274780 | Msa0842260:intron | 15.0% |
!! | AAAAAGAAAATTAATTACCT+TGG | - | chr5_4:19274898-19274917 | None:intergenic | 15.0% |
!!! | TAATATTAACTTGCAATTTT+TGG | + | chr5_4:19275340-19275359 | Msa0842260:intron | 15.0% |
!!! | ATCTTCTCATATTTAATTTA+TGG | + | chr5_4:19275686-19275705 | Msa0842260:intron | 15.0% |
!! | TTAATAAAACTTTCTGTTAA+TGG | - | chr5_4:19276310-19276329 | None:intergenic | 15.0% |
!!! | AATAGGTTTATATTGATTTA+TGG | + | chr5_4:19276589-19276608 | Msa0842260:intron | 15.0% |
!!! | TTTTATTGAACAATTTTTCT+AGG | - | chr5_4:19276732-19276751 | None:intergenic | 15.0% |
!!! | TTATTTAATATTGATTTGGT+AGG | - | chr5_4:19276822-19276841 | None:intergenic | 15.0% |
!!! | GACATTATTTAATATTGATT+TGG | - | chr5_4:19276826-19276845 | None:intergenic | 15.0% |
!!! | TATATGAATTTTATTAGACA+TGG | - | chr5_4:19276898-19276917 | None:intergenic | 15.0% |
!!! | CAATTCAAATAATTTTTAGT+TGG | - | chr5_4:19277643-19277662 | None:intergenic | 15.0% |
!! | CAATAAAGTTAAAATTACAT+TGG | - | chr5_4:19278093-19278112 | None:intergenic | 15.0% |
!! | AAATGAGATGTATATAAAAA+GGG | + | chr5_4:19278383-19278402 | Msa0842260:intron | 15.0% |
!! | AAATACATTGTATAAGTAAT+TGG | - | chr5_4:19278445-19278464 | None:intergenic | 15.0% |
!!! | ATATACTTGCATATTTTTTT+TGG | + | chr5_4:19278900-19278919 | Msa0842260:intron | 15.0% |
!! | ATTGTAAATCTTTATATTGC+TGG | + | chr5_4:19271640-19271659 | Msa0842260:intron | 20.0% |
!!! | TATGCTTTGTTATGATTAAT+AGG | + | chr5_4:19272082-19272101 | Msa0842260:intron | 20.0% |
!! | AGGTTTATATTATTAGTACA+TGG | + | chr5_4:19272960-19272979 | Msa0842260:intron | 20.0% |
!! | CATGCAAATAAATTTATGAA+TGG | + | chr5_4:19273005-19273024 | Msa0842260:intron | 20.0% |
!!! | AGACTTATAAAAAGGTTTTT+GGG | + | chr5_4:19273443-19273462 | Msa0842260:CDS | 20.0% |
!! | AAGATCAATTTAAATCTCTA+TGG | + | chr5_4:19273500-19273519 | Msa0842260:CDS | 20.0% |
!! | GAGAGTAAAAAAATAAATCA+TGG | - | chr5_4:19273567-19273586 | None:intergenic | 20.0% |
!! | TTTCTTTACCATATTCATTA+GGG | + | chr5_4:19273816-19273835 | Msa0842260:intron | 20.0% |
!! | TGAATTATATACAAATTCAC+AGG | + | chr5_4:19273985-19274004 | Msa0842260:intron | 20.0% |
!! | GAATTATATACAAATTCACA+GGG | + | chr5_4:19273986-19274005 | Msa0842260:intron | 20.0% |
!!! | TTATAACAAAGTTTCCATTT+TGG | - | chr5_4:19274036-19274055 | None:intergenic | 20.0% |
!! | GTTATAAAAAATATTGTACC+TGG | + | chr5_4:19274049-19274068 | Msa0842260:CDS | 20.0% |
!! | TAACTGTTTAGTTAATAGTT+TGG | - | chr5_4:19274257-19274276 | None:intergenic | 20.0% |
!!! | AATAGTTTGTTGTAATTAGT+TGG | + | chr5_4:19274280-19274299 | Msa0842260:intron | 20.0% |
!! | ATATATTCTATGATAGGTTT+AGG | + | chr5_4:19274767-19274786 | Msa0842260:intron | 20.0% |
!! | TAAACTTCAATTATATATGC+AGG | + | chr5_4:19274958-19274977 | Msa0842260:intron | 20.0% |
!! | AAGGACTGAAAATATATTTA+GGG | - | chr5_4:19275143-19275162 | None:intergenic | 20.0% |
!! | AAAGGACTGAAAATATATTT+AGG | - | chr5_4:19275144-19275163 | None:intergenic | 20.0% |
!! | GAATATAGATTAACTTACAT+CGG | - | chr5_4:19275313-19275332 | None:intergenic | 20.0% |
!!! | TTTTAGGAAAAAAATAAAGC+TGG | + | chr5_4:19275734-19275753 | Msa0842260:intron | 20.0% |
!! | TTGTGTACATATATGTATTA+TGG | + | chr5_4:19275793-19275812 | Msa0842260:intron | 20.0% |
!! | GAGTTGAAAATTTGAATTAT+TGG | + | chr5_4:19276170-19276189 | Msa0842260:intron | 20.0% |
!! | TTGAAATTAACCATAGAAAT+AGG | + | chr5_4:19276572-19276591 | Msa0842260:intron | 20.0% |
!!! | TCAATATAAACCTATTTCTA+TGG | - | chr5_4:19276585-19276604 | None:intergenic | 20.0% |
!!! | TAGACATTTTTTCAATTAGT+TGG | - | chr5_4:19276676-19276695 | None:intergenic | 20.0% |
!! | AAGATCAATTTAAATCTCTA+TGG | + | chr5_4:19273500-19273519 | Msa0842260:CDS | 20.0% |
!! | CATTAAACAAGGTAATTATA+TGG | + | chr5_4:19277809-19277828 | Msa0842260:intron | 20.0% |
!! | ACAATCAAAATAATATCACA+TGG | + | chr5_4:19277846-19277865 | Msa0842260:intron | 20.0% |
!!! | AATTGTTTACTAATGGATTA+TGG | - | chr5_4:19278296-19278315 | None:intergenic | 20.0% |
!! | TCACATAAATTGTTTACTAA+TGG | - | chr5_4:19278303-19278322 | None:intergenic | 20.0% |
!! | TGTAAAGATGCTTATAAAAA+TGG | - | chr5_4:19278364-19278383 | None:intergenic | 20.0% |
!! | CAAATGAGATGTATATAAAA+AGG | + | chr5_4:19278382-19278401 | Msa0842260:intron | 20.0% |
!! | CAATGTATTTATTCTATGAT+AGG | + | chr5_4:19278455-19278474 | Msa0842260:intron | 20.0% |
!! | ATTTATTCTATGATAGGTTT+AGG | + | chr5_4:19278461-19278480 | Msa0842260:intron | 20.0% |
!! | ATCATGATATGGATATAAAT+CGG | - | chr5_4:19278512-19278531 | None:intergenic | 20.0% |
!! | TTGATAAATATCAAAAGGAT+TGG | + | chr5_4:19278551-19278570 | Msa0842260:CDS | 20.0% |
!! | TTAACAAAACTAATTTACCT+GGG | - | chr5_4:19278592-19278611 | None:intergenic | 20.0% |
!! | ATTAACAAAACTAATTTACC+TGG | - | chr5_4:19278593-19278612 | None:intergenic | 20.0% |
!!! | ATAATTGTCCTTTTTTTTTG+TGG | + | chr5_4:19278618-19278637 | Msa0842260:intron | 20.0% |
!!! | ATTTGATTTGTTGTAAAGTA+AGG | - | chr5_4:19278971-19278990 | None:intergenic | 20.0% |
!! | TACTTTACAACAAATCAAAT+AGG | + | chr5_4:19278971-19278990 | Msa0842260:CDS | 20.0% |
!!! | AGATATGAATCATTTTTCAA+AGG | + | chr5_4:19279109-19279128 | Msa0842260:CDS | 20.0% |
! | AGGTTAATTATATACTAGCT+AGG | + | chr5_4:19271519-19271538 | Msa0842260:intron | 25.0% |
! | CTGCAATGTAACAAATTTAA+AGG | - | chr5_4:19271718-19271737 | None:intergenic | 25.0% |
! | ACTCTGATTCAAAAAAAGAT+AGG | + | chr5_4:19271756-19271775 | Msa0842260:intron | 25.0% |
!!! | TTTTCTTAATGATTTTCAGG+TGG | + | chr5_4:19271836-19271855 | Msa0842260:intron | 25.0% |
! | GAAATAAAGATGATGATAGA+GGG | + | chr5_4:19271955-19271974 | Msa0842260:CDS | 25.0% |
!!! | TTTTTGGCAAAACATTTCAA+AGG | + | chr5_4:19272118-19272137 | Msa0842260:CDS | 25.0% |
! | TTAGTTATGAACATGTTTCT+TGG | + | chr5_4:19272426-19272445 | Msa0842260:intron | 25.0% |
! | TATAGGTATATTGTGAGAAA+AGG | + | chr5_4:19272513-19272532 | Msa0842260:intron | 25.0% |
!! | CTATTAAAGTTGGTCAAATA+AGG | + | chr5_4:19272589-19272608 | Msa0842260:CDS | 25.0% |
!!! | AATTTTGATAGTTAGTTACC+TGG | - | chr5_4:19272637-19272656 | None:intergenic | 25.0% |
! | TTGTAACAAGAGCTAATATT+TGG | - | chr5_4:19272701-19272720 | None:intergenic | 25.0% |
! | ATATGGCAATATCAGATATT+AGG | + | chr5_4:19272767-19272786 | Msa0842260:CDS | 25.0% |
!! | GAGACTTATAAAAAGGTTTT+TGG | + | chr5_4:19273442-19273461 | Msa0842260:CDS | 25.0% |
! | GAATTCAAGTAAACAAAGAT+AGG | - | chr5_4:19273469-19273488 | None:intergenic | 25.0% |
! | CTTTCTTTACCATATTCATT+AGG | + | chr5_4:19273815-19273834 | Msa0842260:intron | 25.0% |
! | TTCTTTACCATATTCATTAG+GGG | + | chr5_4:19273817-19273836 | Msa0842260:intron | 25.0% |
! | TTACCTGGTTTAATTGTAAT+TGG | - | chr5_4:19274133-19274152 | None:intergenic | 25.0% |
! | ATTTATTTGCAAACTTTACC+TGG | - | chr5_4:19274148-19274167 | None:intergenic | 25.0% |
!! | CGTCACTAGTAATAATTTTT+CGG | - | chr5_4:19274202-19274221 | None:intergenic | 25.0% |
! | GTAACAATGTGTATATATGT+AGG | + | chr5_4:19274417-19274436 | Msa0842260:intron | 25.0% |
!! | ATATATTTCATTCGAGTTAG+TGG | - | chr5_4:19274751-19274770 | None:intergenic | 25.0% |
! | TTGGATATAATTCACTGTAA+CGG | - | chr5_4:19274810-19274829 | None:intergenic | 25.0% |
! | TTGAAGTTTAGACCAAAAAA+TGG | - | chr5_4:19274948-19274967 | None:intergenic | 25.0% |
! | TTCAAATATAATCTTCCATG+TGG | - | chr5_4:19275012-19275031 | None:intergenic | 25.0% |
! | TGGAAGATTATATTTGAACA+TGG | + | chr5_4:19275014-19275033 | Msa0842260:CDS | 25.0% |
! | TTTATTGATAAAACTCTCTG+TGG | - | chr5_4:19275283-19275302 | None:intergenic | 25.0% |
! | TAAACAACCAATATAATCCA+TGG | - | chr5_4:19275467-19275486 | None:intergenic | 25.0% |
!! | AATCAAGATATGACTCATTT+TGG | + | chr5_4:19275544-19275563 | Msa0842260:intron | 25.0% |
! | TGAGAAGATAATTTATTCCT+AGG | - | chr5_4:19275675-19275694 | None:intergenic | 25.0% |
!!! | CTAGAAAGCATATAGATTTT+AGG | + | chr5_4:19275718-19275737 | Msa0842260:intron | 25.0% |
! | GTACACAATACAACTAATTA+TGG | - | chr5_4:19275781-19275800 | None:intergenic | 25.0% |
! | AAAATGAAAGAAACAGAGTT+AGG | + | chr5_4:19276013-19276032 | Msa0842260:intron | 25.0% |
! | TGTTCAATAAAATCTCATGT+TGG | + | chr5_4:19276740-19276759 | Msa0842260:intron | 25.0% |
!! | ATTTTATTGAACTTACAGAG+AGG | - | chr5_4:19276799-19276818 | None:intergenic | 25.0% |
! | GAATTCAAGTAAACAAAGAT+AGG | - | chr5_4:19273469-19273488 | None:intergenic | 25.0% |
!!! | GAACAAAATCTTTTGATTGA+GGG | - | chr5_4:19277292-19277311 | None:intergenic | 25.0% |
! | TTTGCTTTACCATATTCATT+AGG | + | chr5_4:19277467-19277486 | Msa0842260:intron | 25.0% |
! | TTGCTTTACCATATTCATTA+GGG | + | chr5_4:19277468-19277487 | Msa0842260:intron | 25.0% |
! | TATGCTAAGAATTCTTACAT+TGG | + | chr5_4:19277505-19277524 | Msa0842260:CDS | 25.0% |
! | GATGAAATCATCATTAAACA+AGG | + | chr5_4:19277798-19277817 | Msa0842260:CDS | 25.0% |
! | AACAAGGTAATTATATGGAT+AGG | + | chr5_4:19277814-19277833 | Msa0842260:intron | 25.0% |
!! | AATCAGACAACTCAAAATTT+TGG | + | chr5_4:19277878-19277897 | Msa0842260:intron | 25.0% |
!! | TTTTGTATAATCTGTTCATG+AGG | - | chr5_4:19278251-19278270 | None:intergenic | 25.0% |
!!! | TGGTGTTGATAAATATCAAA+AGG | + | chr5_4:19278546-19278565 | Msa0842260:CDS | 25.0% |
! | AAACAATGCCACAAAAAAAA+AGG | - | chr5_4:19278629-19278648 | None:intergenic | 25.0% |
! | TTCAAATATAATCTTCCATG+TGG | - | chr5_4:19275012-19275031 | None:intergenic | 25.0% |
!!! | TGCATATTTTTTTTGGATGA+TGG | + | chr5_4:19278907-19278926 | Msa0842260:intron | 25.0% |
!!! | GCATATTTTTTTTGGATGAT+GGG | + | chr5_4:19278908-19278927 | Msa0842260:intron | 25.0% |
ATCAAATGAAATATCTCCGT+TGG | - | chr5_4:19271298-19271317 | None:intergenic | 30.0% | |
TATTGCTGGAAAAAATCCAA+CGG | + | chr5_4:19271654-19271673 | Msa0842260:intron | 30.0% | |
GTCTTAGGAATATCATATTC+TGG | + | chr5_4:19271909-19271928 | Msa0842260:CDS | 30.0% | |
! | AGGAATATCATATTCTGGAA+TGG | + | chr5_4:19271914-19271933 | Msa0842260:CDS | 30.0% |
GGAAATAAAGATGATGATAG+AGG | + | chr5_4:19271954-19271973 | Msa0842260:CDS | 30.0% | |
TGTTACTGAATATAAGCTTG+TGG | - | chr5_4:19272028-19272047 | None:intergenic | 30.0% | |
GATTAATAGGTACTTTGATG+TGG | + | chr5_4:19272095-19272114 | Msa0842260:intron | 30.0% | |
!! | TAGTGGAGGTTTCATTTTTA+AGG | + | chr5_4:19272309-19272328 | Msa0842260:CDS | 30.0% |
!! | AGTGGAGGTTTCATTTTTAA+GGG | + | chr5_4:19272310-19272329 | Msa0842260:CDS | 30.0% |
ACCTTTGGTCTATGTTTATA+GGG | - | chr5_4:19272367-19272386 | None:intergenic | 30.0% | |
AAATCCTAGTCCCAATTATT+TGG | + | chr5_4:19272388-19272407 | Msa0842260:intron | 30.0% | |
ACAAACTGTGCCAAATAATT+GGG | - | chr5_4:19272401-19272420 | None:intergenic | 30.0% | |
! | TTAATAGCAGGAAATCCTTT+TGG | - | chr5_4:19272576-19272595 | None:intergenic | 30.0% |
ATTTGACCAACTTTAATAGC+AGG | - | chr5_4:19272588-19272607 | None:intergenic | 30.0% | |
AGATATTAGGCAAAGAAGAA+TGG | + | chr5_4:19272780-19272799 | Msa0842260:CDS | 30.0% | |
TCCATCTAATCCTCAATTTA+AGG | + | chr5_4:19272867-19272886 | Msa0842260:CDS | 30.0% | |
CCATCTAATCCTCAATTTAA+GGG | + | chr5_4:19272868-19272887 | Msa0842260:CDS | 30.0% | |
GGAGAGGTAACTAAATAAAT+AGG | + | chr5_4:19272889-19272908 | Msa0842260:intron | 30.0% | |
ATTAATAGCACCAAATTGAG+TGG | - | chr5_4:19272940-19272959 | None:intergenic | 30.0% | |
!! | CTCAATTTGGTGCTATTAAT+AGG | + | chr5_4:19272940-19272959 | Msa0842260:intron | 30.0% |
TGACAAATATCAATACTCCA+TGG | + | chr5_4:19273049-19273068 | Msa0842260:CDS | 30.0% | |
TAAGTTCAACACATCAAAGA+TGG | + | chr5_4:19273222-19273241 | Msa0842260:intron | 30.0% | |
AAGTTCAACACATCAAAGAT+GGG | + | chr5_4:19273223-19273242 | Msa0842260:intron | 30.0% | |
CATGAAAAACCAGAACTAAA+CGG | - | chr5_4:19273288-19273307 | None:intergenic | 30.0% | |
AGAAGGAGAGACTTATAAAA+AGG | + | chr5_4:19273435-19273454 | Msa0842260:CDS | 30.0% | |
TCTTTACCATATTCATTAGG+GGG | + | chr5_4:19273818-19273837 | Msa0842260:intron | 30.0% | |
AATGCTAAGAATGCATACAT+TGG | + | chr5_4:19273853-19273872 | Msa0842260:CDS | 30.0% | |
TCTCCAATTACAATTAAACC+AGG | + | chr5_4:19274127-19274146 | Msa0842260:CDS | 30.0% | |
GTATATAATCCTCCAAGAAA+TGG | + | chr5_4:19274465-19274484 | Msa0842260:CDS | 30.0% | |
ATTATGGTTTAGAGACTAAC+TGG | - | chr5_4:19274599-19274618 | None:intergenic | 30.0% | |
GCGCGTCAATTATTTAATTA+TGG | - | chr5_4:19274615-19274634 | None:intergenic | 30.0% | |
! | ATGCTCGCATCAAATATTTT+TGG | - | chr5_4:19274641-19274660 | None:intergenic | 30.0% |
! | CTCTTTTGCGCTTATAATTA+AGG | - | chr5_4:19274677-19274696 | None:intergenic | 30.0% |
TATGATAGGTTTAGGCAATA+TGG | + | chr5_4:19274775-19274794 | Msa0842260:intron | 30.0% | |
ATAAATTTCAAGCAACCACA+TGG | + | chr5_4:19274994-19275013 | Msa0842260:CDS | 30.0% | |
! | TTTTTGGATGATGTATGATC+AGG | + | chr5_4:19275356-19275375 | Msa0842260:intron | 30.0% |
! | ATTCTCTTTGTTGTGAAGTA+GGG | - | chr5_4:19275411-19275430 | None:intergenic | 30.0% |
! | TATTCTCTTTGTTGTGAAGT+AGG | - | chr5_4:19275412-19275431 | None:intergenic | 30.0% |
TACTTCACAACAAAGAGAAT+AGG | + | chr5_4:19275411-19275430 | Msa0842260:CDS | 30.0% | |
! | ATGGAATCCATGGATTATAT+TGG | + | chr5_4:19275457-19275476 | Msa0842260:CDS | 30.0% |
ATGAATACTTGGTACTTCTA+TGG | - | chr5_4:19275490-19275509 | None:intergenic | 30.0% | |
!! | AGAAGTACCAAGTATTCATT+TGG | + | chr5_4:19275491-19275510 | Msa0842260:CDS | 30.0% |
! | CCTTTTACCAAATGAATACT+TGG | - | chr5_4:19275501-19275520 | None:intergenic | 30.0% |
CCAAGTATTCATTTGGTAAA+AGG | + | chr5_4:19275498-19275517 | Msa0842260:intron | 30.0% | |
ATAATTTATTCCTAGGCAAG+CGG | - | chr5_4:19275668-19275687 | None:intergenic | 30.0% | |
! | CTGCAATTGATAACAACATA+AGG | - | chr5_4:19275859-19275878 | None:intergenic | 30.0% |
TACTTCACAACAAAACCTTT+GGG | - | chr5_4:19276421-19276440 | None:intergenic | 30.0% | |
TTACTTCACAACAAAACCTT+TGG | - | chr5_4:19276422-19276441 | None:intergenic | 30.0% | |
! | TTTGTTGTGAAGTAAGTTAG+CGG | + | chr5_4:19276427-19276446 | Msa0842260:intron | 30.0% |
!! | GTTATTTCTCAAGAGCATAT+GGG | - | chr5_4:19276501-19276520 | None:intergenic | 30.0% |
!! | TGTTATTTCTCAAGAGCATA+TGG | - | chr5_4:19276502-19276521 | None:intergenic | 30.0% |
ATAATTACCAAGATTCTAGC+AGG | - | chr5_4:19276545-19276564 | None:intergenic | 30.0% | |
! | GAGACTTATAAGAAGGTTTT+CGG | + | chr5_4:19277058-19277077 | Msa0842260:CDS | 30.0% |
! | AGACTTATAAGAAGGTTTTC+GGG | + | chr5_4:19277059-19277078 | Msa0842260:CDS | 30.0% |
! | GACACATAATTTTCCTTCTT+TGG | + | chr5_4:19277223-19277242 | Msa0842260:intron | 30.0% |
TATCGAATGAAGTCAAAAGT+TGG | + | chr5_4:19277255-19277274 | Msa0842260:CDS | 30.0% | |
TTTGATTGAGGGAAATCATA+AGG | - | chr5_4:19277281-19277300 | None:intergenic | 30.0% | |
!! | CGAACAAAATCTTTTGATTG+AGG | - | chr5_4:19277293-19277312 | None:intergenic | 30.0% |
! | ATTTTGTTCGACCTAATCTA+CGG | + | chr5_4:19277303-19277322 | Msa0842260:CDS | 30.0% |
CTATCGTCAAAAAGATATAC+CGG | - | chr5_4:19277361-19277380 | None:intergenic | 30.0% | |
TGCTTTACCATATTCATTAG+GGG | + | chr5_4:19277469-19277488 | Msa0842260:intron | 30.0% | |
! | AATCACAGGGATATCAATTT+TGG | + | chr5_4:19277670-19277689 | Msa0842260:intron | 30.0% |
GTCATAAAAAACATTGTACC+TGG | + | chr5_4:19277720-19277739 | Msa0842260:CDS | 30.0% | |
! | TGTATACAACTTGTTTGCAT+GGG | + | chr5_4:19277743-19277762 | Msa0842260:CDS | 30.0% |
!!! | TTTTGAGTTGTCTGATTTTG+TGG | - | chr5_4:19277875-19277894 | None:intergenic | 30.0% |
AGAACACTTAACCCATAAAT+CGG | - | chr5_4:19277943-19277962 | None:intergenic | 30.0% | |
AATACAATGTAGTCACTTCT+AGG | - | chr5_4:19278047-19278066 | None:intergenic | 30.0% | |
CTTTATTGCAATGTACATGT+AGG | + | chr5_4:19278105-19278124 | Msa0842260:intron | 30.0% | |
GTATATAATCCTCCAAGAAA+TGG | + | chr5_4:19274465-19274484 | Msa0842260:CDS | 30.0% | |
TATAATCTGTTCATGAGGTT+AGG | - | chr5_4:19278246-19278265 | None:intergenic | 30.0% | |
AAGATGCTTATAAAAATGGC+CGG | - | chr5_4:19278360-19278379 | None:intergenic | 30.0% | |
TATGATAGGTTTAGGCAATA+TGG | + | chr5_4:19274775-19274794 | Msa0842260:intron | 30.0% | |
ATGATAGGTTTAGGCAATAT+GGG | + | chr5_4:19274776-19274795 | Msa0842260:intron | 30.0% | |
ATGGATATAAATCGGTGTAA+TGG | - | chr5_4:19278504-19278523 | None:intergenic | 30.0% | |
GTGTAAACAAGATCATGATA+TGG | - | chr5_4:19278523-19278542 | None:intergenic | 30.0% | |
!!! | TGTTTTAGTCTAAACTTCAC+TGG | + | chr5_4:19278644-19278663 | Msa0842260:intron | 30.0% |
TAAACTTCACTGGTATATAC+AGG | + | chr5_4:19278654-19278673 | Msa0842260:intron | 30.0% | |
CTTGAAAATGATGTATTGAG+TGG | + | chr5_4:19278728-19278747 | Msa0842260:CDS | 30.0% | |
!! | TGATTTGTTGTAAAGTAAGG+AGG | - | chr5_4:19278968-19278987 | None:intergenic | 30.0% |
TATACAACCAATACAATCCA+TGG | - | chr5_4:19279027-19279046 | None:intergenic | 30.0% | |
AAATCGTGAAAATTCTCAGC+AGG | + | chr5_4:19271499-19271518 | Msa0842260:CDS | 35.0% | |
! | TGGCATCTTTTCCATTACTT+TGG | + | chr5_4:19271869-19271888 | Msa0842260:CDS | 35.0% |
ATGGAAAATGTACTTGAAGC+TGG | + | chr5_4:19271933-19271952 | Msa0842260:CDS | 35.0% | |
! | AGGTACTTTGATGTGGTTTT+TGG | + | chr5_4:19272102-19272121 | Msa0842260:intron | 35.0% |
AACACAGAACGAGAATATAG+TGG | + | chr5_4:19272292-19272311 | Msa0842260:CDS | 35.0% | |
!! | AGGTTTCATTTTTAAGGGCA+TGG | + | chr5_4:19272315-19272334 | Msa0842260:CDS | 35.0% |
TCCCTATAAACATAGACCAA+AGG | + | chr5_4:19272363-19272382 | Msa0842260:CDS | 35.0% | |
CACCTTTGGTCTATGTTTAT+AGG | - | chr5_4:19272368-19272387 | None:intergenic | 35.0% | |
CACAAACTGTGCCAAATAAT+TGG | - | chr5_4:19272402-19272421 | None:intergenic | 35.0% | |
GTGATATTTGAACGACCAAA+AGG | + | chr5_4:19272558-19272577 | Msa0842260:CDS | 35.0% | |
GGATTTCCTGCTATTAAAGT+TGG | + | chr5_4:19272579-19272598 | Msa0842260:CDS | 35.0% | |
!!! | AAGGACTGTTTTTAAACCCA+AGG | + | chr5_4:19272608-19272627 | Msa0842260:CDS | 35.0% |
TCAACGAAAGATAGAGATGA+CGG | + | chr5_4:19272805-19272824 | Msa0842260:CDS | 35.0% | |
! | TAGAGATGACGGTCAAAAAT+TGG | + | chr5_4:19272816-19272835 | Msa0842260:CDS | 35.0% |
CCCTTAAATTGAGGATTAGA+TGG | - | chr5_4:19272871-19272890 | None:intergenic | 35.0% | |
TAATCCTCAATTTAAGGGAG+AGG | + | chr5_4:19272873-19272892 | Msa0842260:CDS | 35.0% | |
GAATGGTTTATGTTGCACTT+AGG | + | chr5_4:19273022-19273041 | Msa0842260:intron | 35.0% | |
CTGTAATCCATCCATTAACT+TGG | - | chr5_4:19273088-19273107 | None:intergenic | 35.0% | |
TGTTATGATCCAAAAACCCA+CGG | - | chr5_4:19273126-19273145 | None:intergenic | 35.0% | |
AGATGTGAGATCTTGCTTAA+CGG | - | chr5_4:19273177-19273196 | None:intergenic | 35.0% | |
ATGGACAGATGCTAAACAAA+AGG | + | chr5_4:19273519-19273538 | Msa0842260:CDS | 35.0% | |
! | TATCGACTGAACTCAAAAGT+TGG | + | chr5_4:19273640-19273659 | Msa0842260:CDS | 35.0% |
CTTTACCATATTCATTAGGG+GGG | + | chr5_4:19273819-19273838 | Msa0842260:intron | 35.0% | |
TTTACCATATTCATTAGGGG+GGG | + | chr5_4:19273820-19273839 | Msa0842260:intron | 35.0% | |
! | ATTCACAGGGCTATCAATTT+TGG | + | chr5_4:19273999-19274018 | Msa0842260:intron | 35.0% |
! | GTCATACAACTTGTTTGCAT+GGG | + | chr5_4:19274072-19274091 | Msa0842260:CDS | 35.0% |
TTGTAATCTCCAATATAGCC+AGG | - | chr5_4:19274100-19274119 | None:intergenic | 35.0% | |
ATTGCGTCTCTAATAAAGTC+AGG | + | chr5_4:19274321-19274340 | Msa0842260:intron | 35.0% | |
!! | TACGAGTGAATTCAAGTTGA+TGG | - | chr5_4:19274448-19274467 | None:intergenic | 35.0% |
TTGTGAATAATCTGTTCACG+AGG | - | chr5_4:19274563-19274582 | None:intergenic | 35.0% | |
GCGCTTATAATTAAGGACAA+AGG | - | chr5_4:19274670-19274689 | None:intergenic | 35.0% | |
GCAAAAGAGTCGTTATATGA+AGG | + | chr5_4:19274688-19274707 | Msa0842260:intron | 35.0% | |
AAAGAGTCGTTATATGAAGG+AGG | + | chr5_4:19274691-19274710 | Msa0842260:intron | 35.0% | |
AAGAGTCGTTATATGAAGGA+GGG | + | chr5_4:19274692-19274711 | Msa0842260:intron | 35.0% | |
CAGTGAATTATATCCAACTC+AGG | + | chr5_4:19274813-19274832 | Msa0842260:CDS | 35.0% | |
TTAGTGACTATCGAAAGGAT+TGG | + | chr5_4:19274857-19274876 | Msa0842260:CDS | 35.0% | |
!!! | CATGTGTAAGTGCCATTTTT+TGG | + | chr5_4:19274933-19274952 | Msa0842260:intron | 35.0% |
! | AATTATATATGCAGGAGCAC+AGG | + | chr5_4:19274966-19274985 | Msa0842260:intron | 35.0% |
GACTAACAAGCATCTTAGAA+AGG | - | chr5_4:19275219-19275238 | None:intergenic | 35.0% | |
!! | AGATATGACTCATTTTGGCA+AGG | + | chr5_4:19275549-19275568 | Msa0842260:intron | 35.0% |
TAGTTGAAGGACTTTCTAAG+CGG | - | chr5_4:19275593-19275612 | None:intergenic | 35.0% | |
CTTCAAAACTGCAAGAATCA+CGG | - | chr5_4:19275627-19275646 | None:intergenic | 35.0% | |
TGAAAGAAACAGAGTTAGGT+CGG | + | chr5_4:19276017-19276036 | Msa0842260:intron | 35.0% | |
CGTAGTGAATTTGGCAAATT+CGG | + | chr5_4:19276047-19276066 | Msa0842260:intron | 35.0% | |
GTAGTGAATTTGGCAAATTC+GGG | + | chr5_4:19276048-19276067 | Msa0842260:intron | 35.0% | |
!! | TTGAAAGTTCTGAGATGCTT+TGG | - | chr5_4:19276335-19276354 | None:intergenic | 35.0% |
! | AAGCTTTTGATACATTGGAG+TGG | - | chr5_4:19276367-19276386 | None:intergenic | 35.0% |
CTCCAATGTATCAAAAGCTT+TGG | + | chr5_4:19276367-19276386 | Msa0842260:intron | 35.0% | |
! | CACCAAAGCTTTTGATACAT+TGG | - | chr5_4:19276372-19276391 | None:intergenic | 35.0% |
ACTTCACAACAAAACCTTTG+GGG | - | chr5_4:19276420-19276439 | None:intergenic | 35.0% | |
TGCTCTTGAGAAATAACAGA+AGG | + | chr5_4:19276504-19276523 | Msa0842260:intron | 35.0% | |
ATTTATGGTGATAGCATCAG+AGG | + | chr5_4:19276604-19276623 | Msa0842260:intron | 35.0% | |
TCTTATAAGTCTCTCCTTCT+TGG | - | chr5_4:19277051-19277070 | None:intergenic | 35.0% | |
AGAAGGAGAGACTTATAAGA+AGG | + | chr5_4:19277051-19277070 | Msa0842260:CDS | 35.0% | |
ATGGTCAGATGCTAAACAAA+AGG | + | chr5_4:19277135-19277154 | Msa0842260:CDS | 35.0% | |
GATAGCTGATTAACCAAAGA+AGG | - | chr5_4:19277239-19277258 | None:intergenic | 35.0% | |
! | TTTTGTTCGACCTAATCTAC+GGG | + | chr5_4:19277304-19277323 | Msa0842260:CDS | 35.0% |
TAATCTACGGGGAACATTAA+CGG | + | chr5_4:19277316-19277335 | Msa0842260:CDS | 35.0% | |
TCAAAAAGATATACCGGTCT+TGG | - | chr5_4:19277355-19277374 | None:intergenic | 35.0% | |
GCTTTACCATATTCATTAGG+GGG | + | chr5_4:19277470-19277489 | Msa0842260:intron | 35.0% | |
CTTTACCATATTCATTAGGG+GGG | + | chr5_4:19273819-19273838 | Msa0842260:intron | 35.0% | |
! | ATTCTTACATTGGTCTAGCT+AGG | + | chr5_4:19277515-19277534 | Msa0842260:CDS | 35.0% |
TGAATTGTGTGTCAAATCAC+AGG | + | chr5_4:19277656-19277675 | Msa0842260:intron | 35.0% | |
GAATTGTGTGTCAAATCACA+GGG | + | chr5_4:19277657-19277676 | Msa0842260:intron | 35.0% | |
! | AGGGATATCAATTTTGGACT+CGG | + | chr5_4:19277676-19277695 | Msa0842260:intron | 35.0% |
! | GTGTATACAACTTGTTTGCA+TGG | + | chr5_4:19277742-19277761 | Msa0842260:CDS | 35.0% |
!! | ATTTTGGCGTTTGTTTTCTG+TGG | + | chr5_4:19277894-19277913 | Msa0842260:intron | 35.0% |
!! | TTTTGGCGTTTGTTTTCTGT+GGG | + | chr5_4:19277895-19277914 | Msa0842260:intron | 35.0% |
GAACACTTAACCCATAAATC+GGG | - | chr5_4:19277942-19277961 | None:intergenic | 35.0% | |
TGTTCATGAGGTTAGGATAA+GGG | - | chr5_4:19278239-19278258 | None:intergenic | 35.0% | |
! | GTTTAGGCAATATGGGTTAT+GGG | + | chr5_4:19278477-19278496 | Msa0842260:CDS | 35.0% |
! | CATGATCTTGTTTACACTGT+TGG | + | chr5_4:19278526-19278545 | Msa0842260:CDS | 35.0% |
! | ATGGAATCCATGGATTGTAT+TGG | + | chr5_4:19279017-19279036 | Msa0842260:CDS | 35.0% |
! | TGAAGTACCTAGTGTTCATT+TGG | + | chr5_4:19279051-19279070 | Msa0842260:CDS | 35.0% |
ATTGCCCAATGCTCAATCTT+CGG | + | chr5_4:19271469-19271488 | Msa0842260:CDS | 40.0% | |
AGAGTTCGAAATCACAACTG+TGG | - | chr5_4:19271741-19271760 | None:intergenic | 40.0% | |
! | TTTCAGGTGGTGATTAGCAA+TGG | + | chr5_4:19271849-19271868 | Msa0842260:intron | 40.0% |
TCCATTACTTTGGCAAATCC+TGG | + | chr5_4:19271879-19271898 | Msa0842260:CDS | 40.0% | |
CCATTACTTTGGCAAATCCT+GGG | + | chr5_4:19271880-19271899 | Msa0842260:CDS | 40.0% | |
CATTACTTTGGCAAATCCTG+GGG | + | chr5_4:19271881-19271900 | Msa0842260:CDS | 40.0% | |
ATTACTTTGGCAAATCCTGG+GGG | + | chr5_4:19271882-19271901 | Msa0842260:CDS | 40.0% | |
AATTACCATTGCAGAGTCCA+TGG | + | chr5_4:19272251-19272270 | Msa0842260:intron | 40.0% | |
ATTACCATTGCAGAGTCCAT+GGG | + | chr5_4:19272252-19272271 | Msa0842260:intron | 40.0% | |
ACAGAACGAGAATATAGTGG+AGG | + | chr5_4:19272295-19272314 | Msa0842260:CDS | 40.0% | |
TGTGCCAAATAATTGGGACT+AGG | - | chr5_4:19272395-19272414 | None:intergenic | 40.0% | |
ATGATTGACACTCTGCGATT+TGG | + | chr5_4:19272454-19272473 | Msa0842260:intron | 40.0% | |
ATTGTGAGAAAAGGCGATTC+TGG | + | chr5_4:19272522-19272541 | Msa0842260:CDS | 40.0% | |
! | TTTTTAAACCCAAGGAAGCC+AGG | + | chr5_4:19272616-19272635 | Msa0842260:CDS | 40.0% |
TGCATGCAGCTTCAACTATA+TGG | + | chr5_4:19272750-19272769 | Msa0842260:intron | 40.0% | |
TGTGTTAAGAGAACAGCTTC+AGG | - | chr5_4:19272847-19272866 | None:intergenic | 40.0% | |
GTTACCTCTCCCTTAAATTG+AGG | - | chr5_4:19272880-19272899 | None:intergenic | 40.0% | |
!! | TGTGCCATTTCCACTCAATT+TGG | + | chr5_4:19272927-19272946 | Msa0842260:intron | 40.0% |
AGCACCAAATTGAGTGGAAA+TGG | - | chr5_4:19272934-19272953 | None:intergenic | 40.0% | |
TGGTTTATGTTGCACTTAGG+TGG | + | chr5_4:19273025-19273044 | Msa0842260:intron | 40.0% | |
AACCAGGACAACCAAGTTAA+TGG | + | chr5_4:19273074-19273093 | Msa0842260:CDS | 40.0% | |
! | ATCCATTAACTTGGTTGTCC+TGG | - | chr5_4:19273079-19273098 | None:intergenic | 40.0% |
AGGACAACCAAGTTAATGGA+TGG | + | chr5_4:19273078-19273097 | Msa0842260:CDS | 40.0% | |
GTTATGATCCAAAAACCCAC+GGG | - | chr5_4:19273125-19273144 | None:intergenic | 40.0% | |
GATGTGAGATCTTGCTTAAC+GGG | - | chr5_4:19273176-19273195 | None:intergenic | 40.0% | |
CAAGATCTCACATCTCATGT+TGG | + | chr5_4:19273182-19273201 | Msa0842260:CDS | 40.0% | |
AACTTACAGAGAGGCAAGTT+GGG | - | chr5_4:19273208-19273227 | None:intergenic | 40.0% | |
GATGTGTTGAACTTACAGAG+AGG | - | chr5_4:19273217-19273236 | None:intergenic | 40.0% | |
! | ACATATCGTCCGTTTAGTTC+TGG | + | chr5_4:19273276-19273295 | Msa0842260:intron | 40.0% |
AAGTCTCTCCTTCTTCGAAT+TGG | - | chr5_4:19273429-19273448 | None:intergenic | 40.0% | |
TTCATTCCACCTAATCAACG+TGG | + | chr5_4:19273690-19273709 | Msa0842260:CDS | 40.0% | |
GACTTGTAAATGTCCGGTTA+GGG | - | chr5_4:19273718-19273737 | None:intergenic | 40.0% | |
GTCTTGGACTTGTAAATGTC+CGG | - | chr5_4:19273724-19273743 | None:intergenic | 40.0% | |
GGACATTTACAAGTCCAAGA+CGG | + | chr5_4:19273723-19273742 | Msa0842260:CDS | 40.0% | |
GACATTTACAAGTCCAAGAC+GGG | + | chr5_4:19273724-19273743 | Msa0842260:CDS | 40.0% | |
TCGTTAATGTATACCCGTCT+TGG | - | chr5_4:19273740-19273759 | None:intergenic | 40.0% | |
! | ATGCATACATTGGTCTAGCT+TGG | + | chr5_4:19273863-19273882 | Msa0842260:CDS | 40.0% |
! | GGTCATACAACTTGTTTGCA+TGG | + | chr5_4:19274071-19274090 | Msa0842260:CDS | 40.0% |
AAGAAATGGCCCAACTGTTT+GGG | + | chr5_4:19274479-19274498 | Msa0842260:CDS | 40.0% | |
TGCCAATTTCCCAAACAGTT+GGG | - | chr5_4:19274491-19274510 | None:intergenic | 40.0% | |
ATGCCAATTTCCCAAACAGT+TGG | - | chr5_4:19274492-19274511 | None:intergenic | 40.0% | |
! | GTTTAGAGACTAACTGGTCT+GGG | - | chr5_4:19274593-19274612 | None:intergenic | 40.0% |
GTTATATGAAGGAGGGACAA+AGG | + | chr5_4:19274699-19274718 | Msa0842260:intron | 40.0% | |
GGTTTAGGCAATATGGTCTA+TGG | + | chr5_4:19274782-19274801 | Msa0842260:intron | 40.0% | |
GTGTAAACAAGATCCTGAGT+TGG | - | chr5_4:19274829-19274848 | None:intergenic | 40.0% | |
! | CAGGATCTTGTTTACACAGT+TGG | + | chr5_4:19274832-19274851 | Msa0842260:CDS | 40.0% |
! | TGGTGTTAGTGACTATCGAA+AGG | + | chr5_4:19274852-19274871 | Msa0842260:CDS | 40.0% |
!! | GGTTTTATGCTCATGTTCCA+AGG | + | chr5_4:19274878-19274897 | Msa0842260:CDS | 40.0% |
!! | GAACATGGTGCTGTAATAAG+TGG | + | chr5_4:19275029-19275048 | Msa0842260:CDS | 40.0% |
GTTAGTCGTGTATCTCTATG+CGG | + | chr5_4:19275232-19275251 | Msa0842260:intron | 40.0% | |
GGATGATGTATGATCAGGTT+TGG | + | chr5_4:19275361-19275380 | Msa0842260:intron | 40.0% | |
! | GAGATGATAATGCCATACCA+AGG | + | chr5_4:19275433-19275452 | Msa0842260:CDS | 40.0% |
! | GGTTTCAACTTGGTAGTTGA+AGG | - | chr5_4:19275606-19275625 | None:intergenic | 40.0% |
CAAGAATCACGGTTTCAACT+TGG | - | chr5_4:19275616-19275635 | None:intergenic | 40.0% | |
!! | CGTGATTCTTGCAGTTTTGA+AGG | + | chr5_4:19275625-19275644 | Msa0842260:intron | 40.0% |
GGCAATCTTGCTCTCAAAAT+TGG | - | chr5_4:19276398-19276417 | None:intergenic | 40.0% | |
CTTCACAACAAAACCTTTGG+GGG | - | chr5_4:19276419-19276438 | None:intergenic | 40.0% | |
GTGATAGCATCAGAGGAATT+TGG | + | chr5_4:19276611-19276630 | Msa0842260:intron | 40.0% | |
GGAATTTGGAAGCAAAGCAA+TGG | + | chr5_4:19276625-19276644 | Msa0842260:intron | 40.0% | |
AACTTACAGAGAGGCAAGTT+GGG | - | chr5_4:19273208-19273227 | None:intergenic | 40.0% | |
TACATCTTTGCCAGCATAGT+GGG | - | chr5_4:19277017-19277036 | None:intergenic | 40.0% | |
GTAGCCATAGAATTCCAAGA+AGG | + | chr5_4:19277034-19277053 | Msa0842260:CDS | 40.0% | |
CTCTCCTTCTTGGAATTCTA+TGG | - | chr5_4:19277041-19277060 | None:intergenic | 40.0% | |
TTTGTTCGACCTAATCTACG+GGG | + | chr5_4:19277305-19277324 | Msa0842260:CDS | 40.0% | |
GTTAATGTTCCCCGTAGATT+AGG | - | chr5_4:19277317-19277336 | None:intergenic | 40.0% | |
AATCTACGGGGAACATTAAC+GGG | + | chr5_4:19277317-19277336 | Msa0842260:CDS | 40.0% | |
GATGTTTACATGTCCAAGAC+CGG | + | chr5_4:19277339-19277358 | Msa0842260:CDS | 40.0% | |
TTTGTCCCCCCTAATGAATA+TGG | - | chr5_4:19277479-19277498 | None:intergenic | 40.0% | |
ATCATGGCAAAAAGAGAGCA+AGG | + | chr5_4:19277552-19277571 | Msa0842260:CDS | 40.0% | |
GCAAACAAGTTGTATACACC+AGG | - | chr5_4:19277741-19277760 | None:intergenic | 40.0% | |
!! | TTTGGCGTTTGTTTTCTGTG+GGG | + | chr5_4:19277896-19277915 | Msa0842260:intron | 40.0% |
ATAAATCGGGCAGAGTACAA+GGG | - | chr5_4:19277929-19277948 | None:intergenic | 40.0% | |
TTGTACTCTGCCCGATTTAT+GGG | + | chr5_4:19277929-19277948 | Msa0842260:intron | 40.0% | |
TACAAGTGAATCCAAGTGCA+TGG | - | chr5_4:19278136-19278155 | None:intergenic | 40.0% | |
AAGAAATGGCCCAACTCTTT+GGG | + | chr5_4:19278167-19278186 | Msa0842260:CDS | 40.0% | |
TGCCAATTTCCCAAAGAGTT+GGG | - | chr5_4:19278179-19278198 | None:intergenic | 40.0% | |
ATGCCAATTTCCCAAAGAGT+TGG | - | chr5_4:19278180-19278199 | None:intergenic | 40.0% | |
ATGAGGTTAGGATAAGGGTT+TGG | - | chr5_4:19278234-19278253 | None:intergenic | 40.0% | |
CTGTTCATGAGGTTAGGATA+AGG | - | chr5_4:19278240-19278259 | None:intergenic | 40.0% | |
TTATAAAAATGGCCGGAGGT+AGG | - | chr5_4:19278353-19278372 | None:intergenic | 40.0% | |
ATGCTTATAAAAATGGCCGG+AGG | - | chr5_4:19278357-19278376 | None:intergenic | 40.0% | |
! | GGTTTAGGCAATATGGGTTA+TGG | + | chr5_4:19278476-19278495 | Msa0842260:intron | 40.0% |
ACTGGTATATACAGGATCAC+AGG | + | chr5_4:19278662-19278681 | Msa0842260:intron | 40.0% | |
TAATCTTCCATGTGGTTGCT+TGG | - | chr5_4:19275004-19275023 | None:intergenic | 40.0% | |
ATATGTGTGTGTGTGTGTGT+GGG | - | chr5_4:19278836-19278855 | None:intergenic | 40.0% | |
TATATGTGTGTGTGTGTGTG+TGG | - | chr5_4:19278837-19278856 | None:intergenic | 40.0% | |
!!! | TTTTTGGATGATGGGTGAAC+AGG | + | chr5_4:19278916-19278935 | Msa0842260:intron | 40.0% |
CCTTTCACCAAATGAACACT+AGG | - | chr5_4:19279061-19279080 | None:intergenic | 40.0% | |
! | CCTAGTGTTCATTTGGTGAA+AGG | + | chr5_4:19279058-19279077 | Msa0842260:CDS | 40.0% |
TTTGGTGAAAGGAAGCAACA+CGG | + | chr5_4:19279069-19279088 | Msa0842260:CDS | 40.0% | |
TCTTACGCTTCTTCTGCAAG+TGG | - | chr5_4:19271447-19271466 | None:intergenic | 45.0% | |
! | ACTTGCAGAAGAAGCGTAAG+AGG | + | chr5_4:19271446-19271465 | Msa0842260:intron | 45.0% |
GTGACCGAAGATTGAGCATT+GGG | - | chr5_4:19271476-19271495 | None:intergenic | 45.0% | |
AGTGACCGAAGATTGAGCAT+TGG | - | chr5_4:19271477-19271496 | None:intergenic | 45.0% | |
CCCAGGATTTGCCAAAGTAA+TGG | - | chr5_4:19271883-19271902 | None:intergenic | 45.0% | |
TTACTTTGGCAAATCCTGGG+GGG | + | chr5_4:19271883-19271902 | Msa0842260:CDS | 45.0% | |
! | AAGGGCATGGAGTTCTTCTA+TGG | + | chr5_4:19272328-19272347 | Msa0842260:CDS | 45.0% |
AGGGCATGGAGTTCTTCTAT+GGG | + | chr5_4:19272329-19272348 | Msa0842260:CDS | 45.0% | |
TGGGACTAGGATTTCACCTT+TGG | - | chr5_4:19272382-19272401 | None:intergenic | 45.0% | |
GTTAGTTACCTGGCTTCCTT+GGG | - | chr5_4:19272627-19272646 | None:intergenic | 45.0% | |
AGTTAGTTACCTGGCTTCCT+TGG | - | chr5_4:19272628-19272647 | None:intergenic | 45.0% | |
GTTGAAGCTGCATGCATCAT+TGG | - | chr5_4:19272746-19272765 | None:intergenic | 45.0% | |
TCAATACTCCATGGAGAACC+AGG | + | chr5_4:19273058-19273077 | Msa0842260:CDS | 45.0% | |
! | AGCAGATTCTGAAAAACCCG+TGG | + | chr5_4:19273106-19273125 | Msa0842260:CDS | 45.0% |
! | GCAGATTCTGAAAAACCCGT+GGG | + | chr5_4:19273107-19273126 | Msa0842260:CDS | 45.0% |
! | CTGAAAAACCCGTGGGTTTT+TGG | + | chr5_4:19273114-19273133 | Msa0842260:CDS | 45.0% |
CCATTGCGGAACTCATTACT+CGG | - | chr5_4:19273149-19273168 | None:intergenic | 45.0% | |
AGTAATGAGTTCCGCAATGG+TGG | + | chr5_4:19273149-19273168 | Msa0842260:CDS | 45.0% | |
GAACTTACAGAGAGGCAAGT+TGG | - | chr5_4:19273209-19273228 | None:intergenic | 45.0% | |
TTTGTAAGCTCCCACTATGC+TGG | + | chr5_4:19273388-19273407 | Msa0842260:CDS | 45.0% | |
TACGTCTTTGCCAGCATAGT+GGG | - | chr5_4:19273401-19273420 | None:intergenic | 45.0% | |
GTAGCCATCCAATTCGAAGA+AGG | + | chr5_4:19273418-19273437 | Msa0842260:CDS | 45.0% | |
CTCTCCTTCTTCGAATTGGA+TGG | - | chr5_4:19273425-19273444 | None:intergenic | 45.0% | |
! | GTTAGGGTTCCACGTTGATT+AGG | - | chr5_4:19273702-19273721 | None:intergenic | 45.0% |
AATCAACGTGGAACCCTAAC+CGG | + | chr5_4:19273702-19273721 | Msa0842260:CDS | 45.0% | |
GGACTTGTAAATGTCCGGTT+AGG | - | chr5_4:19273719-19273738 | None:intergenic | 45.0% | |
TTTGCCCCCCCTAATGAATA+TGG | - | chr5_4:19273827-19273846 | None:intergenic | 45.0% | |
ATCATGGCAGAGAGAAAGCA+AGG | + | chr5_4:19273900-19273919 | Msa0842260:CDS | 45.0% | |
! | TGGACTAGAGCAGACCAAAA+TGG | + | chr5_4:19274019-19274038 | Msa0842260:CDS | 45.0% |
GCAAACAAGTTGTATGACCC+AGG | - | chr5_4:19274070-19274089 | None:intergenic | 45.0% | |
! | AACTTGTTTGCATGGGTTCC+TGG | + | chr5_4:19274079-19274098 | Msa0842260:CDS | 45.0% |
CAAACAGTTGGGCCATTTCT+TGG | - | chr5_4:19274480-19274499 | None:intergenic | 45.0% | |
CAAGAAATGGCCCAACTGTT+TGG | + | chr5_4:19274478-19274497 | Msa0842260:CDS | 45.0% | |
GGTTTAGAGACTAACTGGTC+TGG | - | chr5_4:19274594-19274613 | None:intergenic | 45.0% | |
!! | AGCATTAGAGGCACTTGCTA+GGG | - | chr5_4:19275075-19275094 | None:intergenic | 45.0% |
TACCTGCACTTCAGCATTAG+AGG | - | chr5_4:19275087-19275106 | None:intergenic | 45.0% | |
TGTTGTGAAGTAGGGAGGAT+TGG | - | chr5_4:19275403-19275422 | None:intergenic | 45.0% | |
! | CTCTTTGTTGTGAAGTAGGG+AGG | - | chr5_4:19275408-19275427 | None:intergenic | 45.0% |
GATAATGCCATACCAAGGCA+TGG | + | chr5_4:19275438-19275457 | Msa0842260:CDS | 45.0% | |
ATGGATTCCATGCCTTGGTA+TGG | - | chr5_4:19275448-19275467 | None:intergenic | 45.0% | |
ATACCAAGGCATGGAATCCA+TGG | + | chr5_4:19275447-19275466 | Msa0842260:CDS | 45.0% | |
AATCCATGGATTCCATGCCT+TGG | - | chr5_4:19275453-19275472 | None:intergenic | 45.0% | |
AGAAACAGAGTTAGGTCGGA+TGG | + | chr5_4:19276021-19276040 | Msa0842260:intron | 45.0% | |
GAAACAGAGTTAGGTCGGAT+GGG | + | chr5_4:19276022-19276041 | Msa0842260:intron | 45.0% | |
AAGCAAGCCTGCTAGAATCT+TGG | + | chr5_4:19276535-19276554 | Msa0842260:intron | 45.0% | |
CAACATGAGATGTGAGGTGT+GGG | - | chr5_4:19276766-19276785 | None:intergenic | 45.0% | |
GAACTTACAGAGAGGCAAGT+TGG | - | chr5_4:19273209-19273228 | None:intergenic | 45.0% | |
TTTATGAGCACCCACTATGC+TGG | + | chr5_4:19277004-19277023 | Msa0842260:CDS | 45.0% | |
CTACATCTTTGCCAGCATAG+TGG | - | chr5_4:19277018-19277037 | None:intergenic | 45.0% | |
GAGCAAGGTACATCTGATGT+TGG | + | chr5_4:19277567-19277586 | Msa0842260:intron | 45.0% | |
TGGACTCGGACAGACAAAAA+TGG | + | chr5_4:19277690-19277709 | Msa0842260:CDS | 45.0% | |
! | AACTTGTTTGCATGGGTTCC+TGG | + | chr5_4:19274079-19274098 | Msa0842260:CDS | 45.0% |
CTGTAATCTCCAATGTAGCC+AGG | - | chr5_4:19277771-19277790 | None:intergenic | 45.0% | |
TAAATCGGGCAGAGTACAAG+GGG | - | chr5_4:19277928-19277947 | None:intergenic | 45.0% | |
CATAAATCGGGCAGAGTACA+AGG | - | chr5_4:19277930-19277949 | None:intergenic | 45.0% | |
CTTGTACTCTGCCCGATTTA+TGG | + | chr5_4:19277928-19277947 | Msa0842260:intron | 45.0% | |
CAAAGAGTTGGGCCATTTCT+TGG | - | chr5_4:19278168-19278187 | None:intergenic | 45.0% | |
CAAGAAATGGCCCAACTCTT+TGG | + | chr5_4:19278166-19278185 | Msa0842260:CDS | 45.0% | |
! | ATGCTCGATTTTCCTACCTC+CGG | + | chr5_4:19278338-19278357 | Msa0842260:intron | 45.0% |
!!! | GGTTTTTTGCTCATGTTCCC+AGG | + | chr5_4:19278572-19278591 | Msa0842260:CDS | 45.0% |
AAACACTCCAAGCAACCACA+TGG | + | chr5_4:19278690-19278709 | Msa0842260:CDS | 45.0% | |
AGCATTAGCAGCACTTGCAA+GGG | - | chr5_4:19278774-19278793 | None:intergenic | 45.0% | |
! | GAGATGATAGTGCCATACCT+AGG | + | chr5_4:19278993-19279012 | Msa0842260:CDS | 45.0% |
ATGGATTCCATGCCTAGGTA+TGG | - | chr5_4:19279008-19279027 | None:intergenic | 45.0% | |
ATACCTAGGCATGGAATCCA+TGG | + | chr5_4:19279007-19279026 | Msa0842260:CDS | 45.0% | |
AATCCATGGATTCCATGCCT+AGG | - | chr5_4:19275453-19275472 | None:intergenic | 45.0% | |
!!! | TTGAATAAATATATTTTTAT+AGG | + | chr5_4:19272496-19272515 | Msa0842260:intron | 5.0% |
! | AATCCTGGGGGGTATGTCTT+AGG | + | chr5_4:19271894-19271913 | Msa0842260:CDS | 50.0% |
ATTCCTAAGACATACCCCCC+AGG | - | chr5_4:19271900-19271919 | None:intergenic | 50.0% | |
TTGTCCCATGGACTCTGCAA+TGG | - | chr5_4:19272259-19272278 | None:intergenic | 50.0% | |
CGACTGAGAAACTTGTCCCA+TGG | - | chr5_4:19272271-19272290 | None:intergenic | 50.0% | |
! | TTGGTTGTCCTGGTTCTCCA+TGG | - | chr5_4:19273069-19273088 | None:intergenic | 50.0% |
CCGAGTAATGAGTTCCGCAA+TGG | + | chr5_4:19273146-19273165 | Msa0842260:CDS | 50.0% | |
CTACGTCTTTGCCAGCATAG+TGG | - | chr5_4:19273402-19273421 | None:intergenic | 50.0% | |
! | AGGGTTCCACGTTGATTAGG+TGG | - | chr5_4:19273699-19273718 | None:intergenic | 50.0% |
! | TACATTGGTCTAGCTTGGCC+TGG | + | chr5_4:19273868-19273887 | Msa0842260:CDS | 50.0% |
! | ACATTGGTCTAGCTTGGCCT+GGG | + | chr5_4:19273869-19273888 | Msa0842260:CDS | 50.0% |
GCATGGGTTCCTGGCTATAT+TGG | + | chr5_4:19274088-19274107 | Msa0842260:CDS | 50.0% | |
ACAGTTGGGCCATTTCTTGG+AGG | - | chr5_4:19274477-19274496 | None:intergenic | 50.0% | |
GGCCCAACTGTTTGGGAAAT+TGG | + | chr5_4:19274486-19274505 | Msa0842260:CDS | 50.0% | |
AATTCTCCAGCTGAGCGATC+TGG | - | chr5_4:19274516-19274535 | None:intergenic | 50.0% | |
ACGAGGTTAGCGTAAGGCTT+TGG | - | chr5_4:19274546-19274565 | None:intergenic | 50.0% | |
CTGTTCACGAGGTTAGCGTA+AGG | - | chr5_4:19274552-19274571 | None:intergenic | 50.0% | |
!! | CAGCATTAGAGGCACTTGCT+AGG | - | chr5_4:19275076-19275095 | None:intergenic | 50.0% |
TGCCTCTAATGCTGAAGTGC+AGG | + | chr5_4:19275082-19275101 | Msa0842260:CDS | 50.0% | |
! | AGAAGTATGACCGCTTGCCT+AGG | + | chr5_4:19275655-19275674 | Msa0842260:intron | 50.0% |
! | GGATGGGCTCGTAGTGAATT+TGG | + | chr5_4:19276038-19276057 | Msa0842260:intron | 50.0% |
CCAACATGAGATGTGAGGTG+TGG | - | chr5_4:19276767-19276786 | None:intergenic | 50.0% | |
CCACACCTCACATCTCATGT+TGG | + | chr5_4:19276764-19276783 | Msa0842260:intron | 50.0% | |
TTGGGCCAACATGAGATGTG+AGG | - | chr5_4:19273190-19273209 | None:intergenic | 50.0% | |
! | TACATTGGTCTAGCTAGGCC+TGG | + | chr5_4:19277520-19277539 | Msa0842260:CDS | 50.0% |
! | ACATTGGTCTAGCTAGGCCT+GGG | + | chr5_4:19277521-19277540 | Msa0842260:CDS | 50.0% |
!! | TGTAGGAAGCACCATGCACT+TGG | + | chr5_4:19278122-19278141 | Msa0842260:intron | 50.0% |
AGAGTTGGGCCATTTCTTGG+AGG | - | chr5_4:19278165-19278184 | None:intergenic | 50.0% | |
! | GGCCCAACTCTTTGGGAAAT+TGG | + | chr5_4:19278174-19278193 | Msa0842260:CDS | 50.0% |
AATTCTCCAGCTGAGCGATC+TGG | - | chr5_4:19274516-19274535 | None:intergenic | 50.0% | |
CAGCATTAGCAGCACTTGCA+AGG | - | chr5_4:19278775-19278794 | None:intergenic | 50.0% | |
TGCTGCTAATGCTGAACTGC+AGG | + | chr5_4:19278781-19278800 | Msa0842260:CDS | 50.0% | |
!! | GGATGATGGGTGAACAGGTT+TGG | + | chr5_4:19278921-19278940 | Msa0842260:intron | 50.0% |
GATAGTGCCATACCTAGGCA+TGG | + | chr5_4:19278998-19279017 | Msa0842260:CDS | 50.0% | |
GCGATTGCGATCATGTCCGT+TGG | - | chr5_4:19271673-19271692 | None:intergenic | 55.0% | |
! | GCTTAACGGGTCCACCATTG+CGG | - | chr5_4:19273163-19273182 | None:intergenic | 55.0% |
! | CATTGGTCTAGCTTGGCCTG+GGG | + | chr5_4:19273870-19273889 | Msa0842260:CDS | 55.0% |
GAGAGCAAGATTGCCCCCAA+AGG | + | chr5_4:19276403-19276422 | Msa0842260:intron | 55.0% | |
! | CATTGGTCTAGCTAGGCCTG+GGG | + | chr5_4:19277522-19277541 | Msa0842260:CDS | 55.0% |
GCATGGGTTCCTGGCTACAT+TGG | + | chr5_4:19277759-19277778 | Msa0842260:CDS | 55.0% | |
TGCCATGATCCTGCATCCCC+AGG | - | chr5_4:19273889-19273908 | None:intergenic | 60.0% | |
GGCATTCCAGATCGCTCAGC+TGG | + | chr5_4:19274507-19274526 | Msa0842260:CDS | 60.0% | |
GGCATTCCAGATCGCTCAGC+TGG | + | chr5_4:19274507-19274526 | Msa0842260:CDS | 60.0% | |
CTAGCTTGGCCTGGGGATGC+AGG | + | chr5_4:19273877-19273896 | Msa0842260:CDS | 65.0% | |
GGCCTGGGGATGCAGGATCA+TGG | + | chr5_4:19273884-19273903 | Msa0842260:CDS | 65.0% | |
TGCCATGATCCTGCAGCCCC+AGG | - | chr5_4:19277541-19277560 | None:intergenic | 65.0% | |
CTAGCTAGGCCTGGGGCTGC+AGG | + | chr5_4:19277529-19277548 | Msa0842260:CDS | 70.0% | |
GGCCTGGGGCTGCAGGATCA+TGG | + | chr5_4:19277536-19277555 | Msa0842260:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_4 | gene | 19271206 | 19279183 | 19271206 | ID=Msa0842260;Name=Msa0842260 |
chr5_4 | mRNA | 19271206 | 19279183 | 19271206 | ID=Msa0842260-mRNA-1;Parent=Msa0842260;Name=Msa0842260-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0.13|0.04|0.95|0.95|0.95|24|0|983 |
chr5_4 | exon | 19271206 | 19271213 | 19271206 | ID=Msa0842260-mRNA-1:exon:7992;Parent=Msa0842260-mRNA-1 |
chr5_4 | exon | 19271454 | 19271520 | 19271454 | ID=Msa0842260-mRNA-1:exon:7993;Parent=Msa0842260-mRNA-1 |
chr5_4 | exon | 19271855 | 19271976 | 19271855 | ID=Msa0842260-mRNA-1:exon:7994;Parent=Msa0842260-mRNA-1 |
chr5_4 | exon | 19272104 | 19272139 | 19272104 | ID=Msa0842260-mRNA-1:exon:7995;Parent=Msa0842260-mRNA-1 |
chr5_4 | exon | 19272265 | 19272384 | 19272265 | ID=Msa0842260-mRNA-1:exon:7996;Parent=Msa0842260-mRNA-1 |
chr5_4 | exon | 19272518 | 19272637 | 19272518 | ID=Msa0842260-mRNA-1:exon:7997;Parent=Msa0842260-mRNA-1 |
chr5_4 | exon | 19272759 | 19272894 | 19272759 | ID=Msa0842260-mRNA-1:exon:7998;Parent=Msa0842260-mRNA-1 |
chr5_4 | exon | 19273044 | 19273220 | 19273044 | ID=Msa0842260-mRNA-1:exon:7999;Parent=Msa0842260-mRNA-1 |
chr5_4 | exon | 19273385 | 19273540 | 19273385 | ID=Msa0842260-mRNA-1:exon:8000;Parent=Msa0842260-mRNA-1 |
chr5_4 | exon | 19273639 | 19273745 | 19273639 | ID=Msa0842260-mRNA-1:exon:8001;Parent=Msa0842260-mRNA-1 |
chr5_4 | exon | 19273837 | 19273921 | 19273837 | ID=Msa0842260-mRNA-1:exon:8002;Parent=Msa0842260-mRNA-1 |
chr5_4 | exon | 19274007 | 19274148 | 19274007 | ID=Msa0842260-mRNA-1:exon:8003;Parent=Msa0842260-mRNA-1 |
chr5_4 | exon | 19274439 | 19274598 | 19274439 | ID=Msa0842260-mRNA-1:exon:8004;Parent=Msa0842260-mRNA-1 |
chr5_4 | exon | 19274783 | 19274899 | 19274783 | ID=Msa0842260-mRNA-1:exon:8005;Parent=Msa0842260-mRNA-1 |
chr5_4 | exon | 19274980 | 19275103 | 19274980 | ID=Msa0842260-mRNA-1:exon:8006;Parent=Msa0842260-mRNA-1 |
chr5_4 | exon | 19275378 | 19275512 | 19275378 | ID=Msa0842260-mRNA-1:exon:8007;Parent=Msa0842260-mRNA-1 |
chr5_4 | exon | 19277001 | 19277156 | 19277001 | ID=Msa0842260-mRNA-1:exon:8008;Parent=Msa0842260-mRNA-1 |
chr5_4 | exon | 19277254 | 19277360 | 19277254 | ID=Msa0842260-mRNA-1:exon:8009;Parent=Msa0842260-mRNA-1 |
chr5_4 | exon | 19277489 | 19277573 | 19277489 | ID=Msa0842260-mRNA-1:exon:8010;Parent=Msa0842260-mRNA-1 |
chr5_4 | exon | 19277678 | 19277819 | 19277678 | ID=Msa0842260-mRNA-1:exon:8011;Parent=Msa0842260-mRNA-1 |
chr5_4 | exon | 19278127 | 19278286 | 19278127 | ID=Msa0842260-mRNA-1:exon:8012;Parent=Msa0842260-mRNA-1 |
chr5_4 | exon | 19278477 | 19278593 | 19278477 | ID=Msa0842260-mRNA-1:exon:8013;Parent=Msa0842260-mRNA-1 |
chr5_4 | exon | 19278676 | 19278802 | 19278676 | ID=Msa0842260-mRNA-1:exon:8014;Parent=Msa0842260-mRNA-1 |
chr5_4 | exon | 19278938 | 19279183 | 19278938 | ID=Msa0842260-mRNA-1:exon:8015;Parent=Msa0842260-mRNA-1 |
chr5_4 | CDS | 19271206 | 19271213 | 19271206 | ID=Msa0842260-mRNA-1:cds;Parent=Msa0842260-mRNA-1 |
chr5_4 | CDS | 19271454 | 19271520 | 19271454 | ID=Msa0842260-mRNA-1:cds;Parent=Msa0842260-mRNA-1 |
chr5_4 | CDS | 19271855 | 19271976 | 19271855 | ID=Msa0842260-mRNA-1:cds;Parent=Msa0842260-mRNA-1 |
chr5_4 | CDS | 19272104 | 19272139 | 19272104 | ID=Msa0842260-mRNA-1:cds;Parent=Msa0842260-mRNA-1 |
chr5_4 | CDS | 19272265 | 19272384 | 19272265 | ID=Msa0842260-mRNA-1:cds;Parent=Msa0842260-mRNA-1 |
chr5_4 | CDS | 19272518 | 19272637 | 19272518 | ID=Msa0842260-mRNA-1:cds;Parent=Msa0842260-mRNA-1 |
chr5_4 | CDS | 19272759 | 19272894 | 19272759 | ID=Msa0842260-mRNA-1:cds;Parent=Msa0842260-mRNA-1 |
chr5_4 | CDS | 19273044 | 19273220 | 19273044 | ID=Msa0842260-mRNA-1:cds;Parent=Msa0842260-mRNA-1 |
chr5_4 | CDS | 19273385 | 19273540 | 19273385 | ID=Msa0842260-mRNA-1:cds;Parent=Msa0842260-mRNA-1 |
chr5_4 | CDS | 19273639 | 19273745 | 19273639 | ID=Msa0842260-mRNA-1:cds;Parent=Msa0842260-mRNA-1 |
chr5_4 | CDS | 19273837 | 19273921 | 19273837 | ID=Msa0842260-mRNA-1:cds;Parent=Msa0842260-mRNA-1 |
chr5_4 | CDS | 19274007 | 19274148 | 19274007 | ID=Msa0842260-mRNA-1:cds;Parent=Msa0842260-mRNA-1 |
chr5_4 | CDS | 19274439 | 19274598 | 19274439 | ID=Msa0842260-mRNA-1:cds;Parent=Msa0842260-mRNA-1 |
chr5_4 | CDS | 19274783 | 19274899 | 19274783 | ID=Msa0842260-mRNA-1:cds;Parent=Msa0842260-mRNA-1 |
chr5_4 | CDS | 19274980 | 19275103 | 19274980 | ID=Msa0842260-mRNA-1:cds;Parent=Msa0842260-mRNA-1 |
chr5_4 | CDS | 19275378 | 19275512 | 19275378 | ID=Msa0842260-mRNA-1:cds;Parent=Msa0842260-mRNA-1 |
chr5_4 | CDS | 19277001 | 19277156 | 19277001 | ID=Msa0842260-mRNA-1:cds;Parent=Msa0842260-mRNA-1 |
chr5_4 | CDS | 19277254 | 19277360 | 19277254 | ID=Msa0842260-mRNA-1:cds;Parent=Msa0842260-mRNA-1 |
chr5_4 | CDS | 19277489 | 19277573 | 19277489 | ID=Msa0842260-mRNA-1:cds;Parent=Msa0842260-mRNA-1 |
chr5_4 | CDS | 19277678 | 19277819 | 19277678 | ID=Msa0842260-mRNA-1:cds;Parent=Msa0842260-mRNA-1 |
chr5_4 | CDS | 19278127 | 19278286 | 19278127 | ID=Msa0842260-mRNA-1:cds;Parent=Msa0842260-mRNA-1 |
chr5_4 | CDS | 19278477 | 19278593 | 19278477 | ID=Msa0842260-mRNA-1:cds;Parent=Msa0842260-mRNA-1 |
chr5_4 | CDS | 19278676 | 19278802 | 19278676 | ID=Msa0842260-mRNA-1:cds;Parent=Msa0842260-mRNA-1 |
chr5_4 | CDS | 19278938 | 19279183 | 19278938 | ID=Msa0842260-mRNA-1:cds;Parent=Msa0842260-mRNA-1 |
Gene Sequence |
Protein sequence |