Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0761430 | XP_003612971.3 | 95.691 | 673 | 29 | 0 | 1 | 673 | 1 | 673 | 0.0 | 1334 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0761430 | sp|Q8RJP2|RHIE_DICD3 | 24.956 | 565 | 325 | 23 | 116 | 667 | 99 | 577 | 4.89e-30 | 129 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0761430 | A0A396HNJ7 | 95.691 | 673 | 29 | 0 | 1 | 673 | 1 | 673 | 0.0 | 1334 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0018060 | Msa0761430 | 0.824430 | 8.108010e-54 | -8.615850e-47 |
| Msa0052380 | Msa0761430 | 0.820786 | 5.704973e-53 | -8.615850e-47 |
| Msa0097390 | Msa0761430 | 0.812740 | 3.642088e-51 | -8.615850e-47 |
| Msa0618050 | Msa0761430 | 0.824797 | 6.642898e-54 | -8.615850e-47 |
| Msa0710160 | Msa0761430 | 0.858754 | 6.631621e-63 | -8.615850e-47 |
| Msa0761430 | Msa0804360 | 0.869945 | 2.116070e-66 | -8.615850e-47 |
| Msa0761430 | Msa0842030 | 0.861127 | 1.276136e-63 | -8.615850e-47 |
| Msa0761430 | Msa0842260 | 0.805612 | 1.227553e-49 | -8.615850e-47 |
| Msa0761430 | Msa1418990 | 0.811558 | 6.592977e-51 | -8.615850e-47 |
| Msa0485970 | Msa0761430 | 0.820128 | 8.076935e-53 | -8.615850e-47 |
| Msa0564950 | Msa0761430 | 0.838249 | 3.216562e-57 | -8.615850e-47 |
| Msa0580580 | Msa0761430 | 0.833850 | 4.208382e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0761430 | MtrunA17_Chr5g0411781 | 95.691 | 673 | 29 | 0 | 1 | 673 | 1 | 673 | 0.0 | 1334 |
| Msa0761430 | MtrunA17_Chr8g0367141 | 62.463 | 682 | 240 | 6 | 1 | 667 | 16 | 696 | 0.0 | 879 |
| Msa0761430 | MtrunA17_Chr8g0367111 | 61.739 | 690 | 241 | 8 | 1 | 670 | 2 | 688 | 0.0 | 864 |
| Msa0761430 | MtrunA17_Chr8g0367101 | 62.719 | 684 | 238 | 7 | 1 | 669 | 1 | 682 | 0.0 | 858 |
| Msa0761430 | MtrunA17_Chr5g0427851 | 52.987 | 636 | 278 | 8 | 52 | 667 | 9 | 643 | 0.0 | 674 |
| Msa0761430 | MtrunA17_Chr3g0141191 | 53.662 | 628 | 276 | 7 | 52 | 667 | 25 | 649 | 0.0 | 670 |
| Msa0761430 | MtrunA17_Chr3g0141181 | 51.030 | 631 | 292 | 8 | 56 | 672 | 13 | 640 | 0.0 | 657 |
| Msa0761430 | MtrunA17_Chr3g0141171 | 51.712 | 555 | 247 | 6 | 58 | 592 | 29 | 582 | 0.0 | 559 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0761430 | AT2G22620.1 | 54.675 | 631 | 273 | 6 | 48 | 670 | 52 | 677 | 0.0 | 708 |
| Msa0761430 | AT2G22620.3 | 54.675 | 631 | 273 | 6 | 48 | 670 | 52 | 677 | 0.0 | 708 |
| Msa0761430 | AT1G09890.4 | 53.045 | 624 | 277 | 9 | 57 | 668 | 14 | 633 | 0.0 | 662 |
| Msa0761430 | AT1G09890.1 | 52.979 | 621 | 276 | 9 | 60 | 668 | 1 | 617 | 0.0 | 658 |
| Msa0761430 | AT1G09890.5 | 52.885 | 624 | 273 | 10 | 57 | 668 | 14 | 628 | 0.0 | 652 |
| Msa0761430 | AT1G09890.3 | 51.080 | 648 | 277 | 10 | 57 | 668 | 14 | 657 | 0.0 | 648 |
| Msa0761430 | AT1G09910.1 | 49.681 | 626 | 301 | 7 | 54 | 669 | 54 | 675 | 0.0 | 641 |
| Msa0761430 | AT1G09910.3 | 49.681 | 626 | 301 | 7 | 54 | 669 | 11 | 632 | 0.0 | 639 |
| Msa0761430 | AT1G09910.2 | 49.681 | 626 | 301 | 7 | 54 | 669 | 11 | 632 | 0.0 | 639 |
| Msa0761430 | AT4G37950.2 | 51.406 | 640 | 286 | 10 | 44 | 668 | 47 | 676 | 0.0 | 637 |
| Msa0761430 | AT4G37950.1 | 51.406 | 640 | 286 | 10 | 44 | 668 | 47 | 676 | 0.0 | 637 |
| Msa0761430 | AT1G09880.3 | 47.626 | 674 | 325 | 10 | 14 | 669 | 41 | 704 | 0.0 | 636 |
| Msa0761430 | AT4G38030.1 | 49.603 | 629 | 292 | 10 | 53 | 668 | 49 | 665 | 0.0 | 636 |
| Msa0761430 | AT1G09880.2 | 47.626 | 674 | 325 | 10 | 14 | 669 | 27 | 690 | 0.0 | 635 |
| Msa0761430 | AT1G09880.4 | 48.402 | 657 | 316 | 9 | 31 | 669 | 7 | 658 | 0.0 | 634 |
| Msa0761430 | AT1G09880.1 | 49.682 | 628 | 294 | 8 | 60 | 669 | 1 | 624 | 0.0 | 629 |
| Msa0761430 | AT4G24430.1 | 51.014 | 641 | 291 | 11 | 45 | 667 | 4 | 639 | 0.0 | 622 |
| Msa0761430 | AT2G22620.4 | 55.882 | 510 | 214 | 4 | 48 | 550 | 52 | 557 | 0.0 | 600 |
| Msa0761430 | AT2G22620.2 | 57.873 | 489 | 200 | 4 | 185 | 670 | 112 | 597 | 0.0 | 585 |
| Msa0761430 | AT1G09890.2 | 51.509 | 530 | 219 | 8 | 57 | 551 | 14 | 540 | 0.0 | 538 |
| Msa0761430 | AT4G24430.2 | 51.908 | 524 | 240 | 8 | 153 | 667 | 1 | 521 | 0.0 | 536 |
| Msa0761430 | AT2G22620.5 | 52.791 | 430 | 190 | 5 | 48 | 470 | 52 | 475 | 1.96e-156 | 460 |
| Msa0761430 | AT1G65210.1 | 54.545 | 187 | 82 | 3 | 483 | 668 | 62 | 246 | 2.52e-60 | 202 |
Find 164 sgRNAs with CRISPR-Local
Find 383 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCCCAACTGTTTGGGAAAT+TGG | 0.140397 | 5_2:+18745820 | Msa0761430:CDS |
| ATTCACAGGGCTATCAATTT+TGG | 0.141260 | 5_2:+18745273 | Msa0761430:intron |
| AATCAAGATTTGACTCATTT+TGG | 0.163949 | 5_2:+18746930 | Msa0761430:CDS |
| TTACCTGGTTTAATTGTAAT+TGG | 0.186445 | 5_2:-18745404 | None:intergenic |
| CACCTTTGGTCTATGTTTAT+AGG | 0.189602 | 5_2:-18743660 | None:intergenic |
| CCTAGTGTTCATTTGGTAAA+AGG | 0.192340 | 5_2:+18746884 | Msa0761430:CDS |
| TTTGATTGAATAAAATTATA+AGG | 0.246769 | 5_2:-18744937 | None:intergenic |
| AACCAATTCAACCAAGTTAA+TGG | 0.247948 | 5_2:+18744348 | Msa0761430:CDS |
| CAAACAGTTGGGCCATTTCT+TGG | 0.250334 | 5_2:-18745811 | None:intergenic |
| AACTTGTTTGCATGGGTTCC+TGG | 0.258856 | 5_2:+18745353 | Msa0761430:CDS |
| ACCTTTGGTCTATGTTTATA+GGG | 0.259445 | 5_2:-18743659 | None:intergenic |
| CCTTTAAATTGTGGATTTGA+TGG | 0.262502 | 5_2:-18744144 | None:intergenic |
| ATCCATTAACTTGGTTGAAT+TGG | 0.263435 | 5_2:-18744350 | None:intergenic |
| TCTTTGCCTAATATCTGATA+TGG | 0.276974 | 5_2:-18744049 | None:intergenic |
| TTATAACAAAGTTTCCATTT+TGG | 0.284242 | 5_2:-18745307 | None:intergenic |
| CCATCAAATCCACAATTTAA+AGG | 0.285485 | 5_2:+18744144 | Msa0761430:CDS |
| AGAAGGAGAGACTTATAAAA+AGG | 0.289826 | 5_2:+18744709 | Msa0761430:CDS |
| AAGGGCATGGAGTTCTTCTA+TGG | 0.291408 | 5_2:+18743623 | Msa0761430:CDS |
| AAGTCTCTCCTTCTTGGAAT+TGG | 0.315514 | 5_2:-18744700 | None:intergenic |
| CAAGAAATGGCCCAACTGTT+TGG | 0.318768 | 5_2:+18745812 | Msa0761430:CDS |
| GAATGAGATATGTTCTAAAT+AGG | 0.320276 | 5_2:-18741171 | None:intergenic |
| ATAGTGAGAAAAGGCGATTC+TGG | 0.321658 | 5_2:+18743801 | Msa0761430:CDS |
| GGACTTGTAAATGTCCGGTT+AGG | 0.325730 | 5_2:-18744990 | None:intergenic |
| AGTTAGTTACCTGGCTTCCT+TGG | 0.327065 | 5_2:-18743904 | None:intergenic |
| GTGGTTGCTTGAAATTTATT+AGG | 0.329354 | 5_2:-18746340 | None:intergenic |
| CTATTAAAGTTGATCAAATA+AGG | 0.330734 | 5_2:+18743868 | Msa0761430:CDS |
| ATTTAGAACATATCTCATTC+AGG | 0.330871 | 5_2:+18741174 | Msa0761430:CDS |
| TGCATGCAGCTTCAACTATA+TGG | 0.332495 | 5_2:+18744026 | Msa0761430:intron |
| ATGGAATCCATGGATTATAT+TGG | 0.336026 | 5_2:+18746843 | Msa0761430:CDS |
| TTAATAGCAGGGAATCCTTT+TGG | 0.336570 | 5_2:-18743852 | None:intergenic |
| GTCTTAGGAATATCATATTC+TGG | 0.344765 | 5_2:+18743223 | Msa0761430:CDS |
| AAGATCAATTTAAATCTCTA+TGG | 0.348047 | 5_2:+18744774 | Msa0761430:CDS |
| GTTAGGGTTCCACGTTGATT+AGG | 0.350575 | 5_2:-18744973 | None:intergenic |
| TACATTGGTCTAGCTTGGCC+TGG | 0.352021 | 5_2:+18745142 | Msa0761430:CDS |
| TGGACTAGAGCAGACCAAAA+TGG | 0.352907 | 5_2:+18745293 | Msa0761430:CDS |
| TACCTGCACTTCAGCATTAG+AGG | 0.353948 | 5_2:-18746434 | None:intergenic |
| GCATGGGTTCCTGGCTATAT+TGG | 0.358022 | 5_2:+18745362 | Msa0761430:CDS |
| TATGATAGGTTTAGGCAATA+TGG | 0.358897 | 5_2:+18746125 | Msa0761430:intron |
| TTGCAACTTTGTTTCACGTT+TGG | 0.371024 | 5_2:+18741146 | Msa0761430:CDS |
| TCCCTTACTTTGGCCAATCC+CGG | 0.375484 | 5_2:+18743193 | Msa0761430:CDS |
| ATGGAAAATGTACTTGAATC+TGG | 0.376558 | 5_2:+18743247 | Msa0761430:CDS |
| AAGAAATGGCCCAACTGTTT+GGG | 0.377978 | 5_2:+18745813 | Msa0761430:CDS |
| GGTTTAGGCAATATGGTCTA+TGG | 0.378350 | 5_2:+18746132 | Msa0761430:intron |
| GGAAATGAAGATGATGATAG+AGG | 0.381623 | 5_2:+18743268 | Msa0761430:CDS |
| CTAGCTTGGCCTGGGGATGC+AGG | 0.388413 | 5_2:+18745151 | Msa0761430:CDS |
| TGCCATGATCCTGCATCCCC+AGG | 0.390903 | 5_2:-18745160 | None:intergenic |
| GTGACTGGAGATTGAGCATT+AGG | 0.391971 | 5_2:-18742779 | None:intergenic |
| CTTGTTGTGGTGGTACATAA+TGG | 0.394702 | 5_2:+18741121 | Msa0761430:CDS |
| TACGAGTGAATTCAAGTTGA+TGG | 0.396239 | 5_2:-18745779 | None:intergenic |
| TATTCTCTTTGTTGTGAAGT+AGG | 0.402262 | 5_2:-18746795 | None:intergenic |
| ATGAACACTAGGTACTTCTA+TGG | 0.404001 | 5_2:-18746873 | None:intergenic |
| ACATTGGTCTAGCTTGGCCT+GGG | 0.407469 | 5_2:+18745143 | Msa0761430:CDS |
| AGAAGTACCTAGTGTTCATT+TGG | 0.408895 | 5_2:+18746877 | Msa0761430:CDS |
| GTTAGTTACCTGGCTTCCTT+GGG | 0.409083 | 5_2:-18743903 | None:intergenic |
| CCCTTACTTTGGCCAATCCC+GGG | 0.410428 | 5_2:+18743194 | Msa0761430:CDS |
| ATTCTCTTTGTTGTGAAGTA+GGG | 0.410957 | 5_2:-18746794 | None:intergenic |
| AACTTACAGAGAGGCAAGTT+GGG | 0.416244 | 5_2:-18744479 | None:intergenic |
| AATTCTCCAGCTGAGCGATC+TGG | 0.416473 | 5_2:-18745847 | None:intergenic |
| TGTGTTAAGAGAACAGCTTC+AGG | 0.421768 | 5_2:-18744120 | None:intergenic |
| GGTTTCAACTTGGTTGTTGA+AGG | 0.423549 | 5_2:-18746989 | None:intergenic |
| GGTTTAGAGACTAACTGGTC+TGG | 0.426955 | 5_2:-18745925 | None:intergenic |
| ATATGGCCATATCAGATATT+AGG | 0.428625 | 5_2:+18744043 | Msa0761430:CDS |
| GTATATAATCCTCCAAGAAA+TGG | 0.429167 | 5_2:+18745799 | Msa0761430:CDS |
| GATGTGAGATCTTGCTTAAC+GGG | 0.429375 | 5_2:-18744447 | None:intergenic |
| CCCCGGGATTGGCCAAAGTA+AGG | 0.431786 | 5_2:-18743195 | None:intergenic |
| GAATTCAAGTAAACAAAGAT+AGG | 0.433996 | 5_2:-18744740 | None:intergenic |
| AATCAACGTGGAACCCTAAC+CGG | 0.443227 | 5_2:+18744976 | Msa0761430:CDS |
| ATTTGATCAACTTTAATAGC+AGG | 0.447303 | 5_2:-18743864 | None:intergenic |
| CAAGAATCATGGTTTCAACT+TGG | 0.451846 | 5_2:-18746999 | None:intergenic |
| GTCTTGGACTTGTAAATGTC+CGG | 0.451859 | 5_2:-18744995 | None:intergenic |
| ACGAGGTTAGCGTAAGGCTT+TGG | 0.452758 | 5_2:-18745877 | None:intergenic |
| GGCCTGGGGATGCAGGATCA+TGG | 0.454305 | 5_2:+18745158 | Msa0761430:CDS |
| ACTTGCAGAAGAAGCGTAAG+AGG | 0.454799 | 5_2:+18742752 | Msa0761430:intron |
| TATAGGTATATAGTGAGAAA+AGG | 0.454887 | 5_2:+18743792 | Msa0761430:intron |
| GGTCATACAACTTGTTTGCA+TGG | 0.455272 | 5_2:+18745345 | Msa0761430:CDS |
| CAGGATCTTGTTTACACAGT+TGG | 0.455563 | 5_2:+18746182 | Msa0761430:CDS |
| CTGTAATCCATCCATTAACT+TGG | 0.457832 | 5_2:-18744359 | None:intergenic |
| GTTACCTCTCCTTTAAATTG+TGG | 0.459036 | 5_2:-18744153 | None:intergenic |
| GACTTGTAAATGTCCGGTTA+GGG | 0.463817 | 5_2:-18744989 | None:intergenic |
| TGCCAATTTCCCAAACAGTT+GGG | 0.472457 | 5_2:-18745822 | None:intergenic |
| GGCATTCCAGATCGCTCAGC+TGG | 0.474004 | 5_2:+18745841 | Msa0761430:CDS |
| TGGAAGATTATATTTGATCA+TGG | 0.475105 | 5_2:+18746364 | Msa0761430:CDS |
| TGGTATCATGTCCCTTACTT+TGG | 0.476275 | 5_2:+18743183 | Msa0761430:CDS |
| TGTTGTGAAGTAGGGAGGAT+TGG | 0.476508 | 5_2:-18746786 | None:intergenic |
| TTGTTGAAGGACTTTCTAAC+CGG | 0.476797 | 5_2:-18746976 | None:intergenic |
| GTCATACAACTTGTTTGCAT+GGG | 0.477226 | 5_2:+18745346 | Msa0761430:CDS |
| GAGTTCTATATGATTATATC+CGG | 0.480910 | 5_2:+18746957 | Msa0761430:CDS |
| CAGCATTAGAGGCACTTGCT+AGG | 0.490093 | 5_2:-18746423 | None:intergenic |
| TCGTTAATGTATACCCGTCT+TGG | 0.490306 | 5_2:-18745011 | None:intergenic |
| ATGCCAATTTCCCAAACAGT+TGG | 0.493759 | 5_2:-18745823 | None:intergenic |
| TGCCTCTAATGCTGAAGTGC+AGG | 0.498076 | 5_2:+18746432 | Msa0761430:CDS |
| GTGGTATTTGAACGACCAAA+AGG | 0.498149 | 5_2:+18743837 | Msa0761430:CDS |
| TTAGTAACTATCGAAAGGAT+TGG | 0.501373 | 5_2:+18746207 | Msa0761430:CDS |
| TACGTCTTTGCCAGCATAGT+GGG | 0.502430 | 5_2:-18744672 | None:intergenic |
| ATGGACAGATGCTAAACAAA+AGG | 0.504220 | 5_2:+18744793 | Msa0761430:CDS |
| TTTGTAAGCACCCACTATGC+TGG | 0.510502 | 5_2:+18744662 | Msa0761430:CDS |
| ATACCAAGGCATGGAATCCA+TGG | 0.511293 | 5_2:+18746833 | Msa0761430:CDS |
| CCTTACTTTGGCCAATCCCG+GGG | 0.512227 | 5_2:+18743195 | Msa0761430:CDS |
| GTTTAGAGACTAACTGGTCT+GGG | 0.514147 | 5_2:-18745924 | None:intergenic |
| AATTCAACCAAGTTAATGGA+TGG | 0.514278 | 5_2:+18744352 | Msa0761430:CDS |
| TTTGATCAACTTTAATAGCA+GGG | 0.515830 | 5_2:-18743863 | None:intergenic |
| CTCTTTGTTGTGAAGTAGGG+AGG | 0.516658 | 5_2:-18746791 | None:intergenic |
| AGATGTGAGATCTTGCTTAA+CGG | 0.517376 | 5_2:-18744448 | None:intergenic |
| GAACTTACAGAGAGGCAAGT+TGG | 0.518644 | 5_2:-18744480 | None:intergenic |
| GACATTTACAAGTCCAAGAC+GGG | 0.518790 | 5_2:+18744998 | Msa0761430:CDS |
| ATGCATACATTGGTCTAGCT+TGG | 0.520047 | 5_2:+18745137 | Msa0761430:CDS |
| AGATATTAGGCAAAGAAGAA+TGG | 0.520707 | 5_2:+18744056 | Msa0761430:CDS |
| AATTACCATTGCAGAGTCCA+TGG | 0.521344 | 5_2:+18743546 | Msa0761430:intron |
| ATGGATTCCATGCCTTGGTA+TGG | 0.521822 | 5_2:-18746831 | None:intergenic |
| AGCATTAGAGGCACTTGCTA+GGG | 0.522110 | 5_2:-18746422 | None:intergenic |
| CGACTGAGAAACTTGTTCCA+TGG | 0.523830 | 5_2:-18743563 | None:intergenic |
| CTCTCCTTCTTGGAATTGGA+TGG | 0.525171 | 5_2:-18744696 | None:intergenic |
| TAATCGTCAAAATTCACAGC+AGG | 0.533295 | 5_2:+18742805 | Msa0761430:CDS |
| CCCGGGATTGGCCAAAGTAA+GGG | 0.535246 | 5_2:-18743194 | None:intergenic |
| TTTCAGGTGGTGATTAGCAA+TGG | 0.535627 | 5_2:+18743163 | Msa0761430:intron |
| ACAGTTGGGCCATTTCTTGG+AGG | 0.543249 | 5_2:-18745808 | None:intergenic |
| AGGAATATCATATTCTGGAA+TGG | 0.543447 | 5_2:+18743228 | Msa0761430:CDS |
| TACTTCACAACAAAGAGAAT+AGG | 0.544075 | 5_2:+18746797 | Msa0761430:CDS |
| TAAACAACCAATATAATCCA+TGG | 0.550594 | 5_2:-18746850 | None:intergenic |
| AATCCATGGATTCCATGCCT+TGG | 0.552884 | 5_2:-18746836 | None:intergenic |
| AGGGTTCCACGTTGATTAGG+TGG | 0.553836 | 5_2:-18744970 | None:intergenic |
| AACACAGAACGAGAATATAG+TGG | 0.554593 | 5_2:+18743587 | Msa0761430:CDS |
| AATTATATATGCAGGAGCAC+AGG | 0.555646 | 5_2:+18746316 | Msa0761430:intron |
| TTGTAATCTCCAATATAGCC+AGG | 0.558313 | 5_2:-18745371 | None:intergenic |
| TATCGACTGAACTCAAAAGT+TGG | 0.559908 | 5_2:+18744914 | Msa0761430:CDS |
| AGGGCATGGAGTTCTTCTAT+GGG | 0.567553 | 5_2:+18743624 | Msa0761430:CDS |
| GTGGAAGGGTTCTCTTGTTG+TGG | 0.568195 | 5_2:+18741108 | Msa0761430:CDS |
| CCATTGCGGAACTCATTACT+CGG | 0.568971 | 5_2:-18744420 | None:intergenic |
| ATCATGGCAGAGAGAAAGCA+AGG | 0.584093 | 5_2:+18745174 | Msa0761430:CDS |
| AGTAATGAGTTCCGCAATGG+TGG | 0.585879 | 5_2:+18744423 | Msa0761430:CDS |
| AATGCTAAGAATGCATACAT+TGG | 0.588205 | 5_2:+18745127 | Msa0761430:CDS |
| CTACGTCTTTGCCAGCATAG+TGG | 0.588233 | 5_2:-18744673 | None:intergenic |
| GAAGGGTTCTCTTGTTGTGG+TGG | 0.588623 | 5_2:+18741111 | Msa0761430:CDS |
| GAAATGAAGATGATGATAGA+GGG | 0.589688 | 5_2:+18743269 | Msa0761430:CDS |
| TTGGTTGAATTGGTTCTCAG+TGG | 0.592830 | 5_2:-18744340 | None:intergenic |
| TGAAGATGAACATGTGTGGA+AGG | 0.595773 | 5_2:+18741093 | Msa0761430:CDS |
| TGGTGTTAGTAACTATCGAA+AGG | 0.597830 | 5_2:+18746202 | Msa0761430:CDS |
| CAGCGATCTATATCCAACTC+AGG | 0.603667 | 5_2:+18746163 | Msa0761430:CDS |
| TTGGATATAGATCGCTGTAA+CGG | 0.603733 | 5_2:-18746157 | None:intergenic |
| AAATCCACAATTTAAAGGAG+AGG | 0.612404 | 5_2:+18744149 | Msa0761430:CDS |
| GATAGTGCCATACCAAGGCA+TGG | 0.612532 | 5_2:+18746824 | Msa0761430:CDS |
| ATAAATTTCAAGCAACCACA+TGG | 0.612722 | 5_2:+18746344 | Msa0761430:CDS |
| GATCATGGTGCTGTAATAAG+TGG | 0.615908 | 5_2:+18746379 | Msa0761430:CDS |
| CTGTTCACGAGGTTAGCGTA+AGG | 0.616934 | 5_2:-18745883 | None:intergenic |
| CAAGATCTCACATCTCATGT+TGG | 0.624859 | 5_2:+18744456 | Msa0761430:CDS |
| CATTGGTCTAGCTTGGCCTG+GGG | 0.625777 | 5_2:+18745144 | Msa0761430:CDS |
| TCCCTATAAACATAGACCAA+AGG | 0.628590 | 5_2:+18743658 | Msa0761430:CDS |
| CTTACTTTGGCCAATCCCGG+GGG | 0.630640 | 5_2:+18743196 | Msa0761430:CDS |
| GTGTAAACAAGATCCTGAGT+TGG | 0.634528 | 5_2:-18746176 | None:intergenic |
| GGACATTTACAAGTCCAAGA+CGG | 0.637789 | 5_2:+18744997 | Msa0761430:CDS |
| CCGAGTAATGAGTTCCGCAA+TGG | 0.639316 | 5_2:+18744420 | Msa0761430:CDS |
| ATCAAATATAATCTTCCATG+TGG | 0.640692 | 5_2:-18746359 | None:intergenic |
| TCTCCAATTACAATTAAACC+AGG | 0.641476 | 5_2:+18745401 | Msa0761430:CDS |
| TCAATGAAAGATAGAGATGA+CGG | 0.642085 | 5_2:+18744081 | Msa0761430:CDS |
| GTAGCCATCCAATTCCAAGA+AGG | 0.653857 | 5_2:+18744692 | Msa0761430:CDS |
| GCTTAACGGGTCCACCATTG+CGG | 0.655063 | 5_2:-18744434 | None:intergenic |
| GCAAACAAGTTGTATGACCC+AGG | 0.663552 | 5_2:-18745341 | None:intergenic |
| TTGTGAATAATCTGTTCACG+AGG | 0.667192 | 5_2:-18745894 | None:intergenic |
| AAGATGAAGATGAACATGTG+TGG | 0.685236 | 5_2:+18741089 | None:intergenic |
| GAAGATGAACATGTGTGGAA+GGG | 0.691411 | 5_2:+18741094 | Msa0761430:CDS |
| GAGATGATAGTGCCATACCA+AGG | 0.696169 | 5_2:+18746819 | Msa0761430:CDS |
| TTACTTTGGCCAATCCCGGG+GGG | 0.703417 | 5_2:+18743197 | Msa0761430:CDS |
| ACAGAACGAGAATATAGTGG+AGG | 0.712115 | 5_2:+18743590 | Msa0761430:CDS |
| TTCATTCCACCTAATCAACG+TGG | 0.715096 | 5_2:+18744964 | Msa0761430:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAAAAATATAAAATAAA+GGG | - | chr5_2:18741674-18741693 | None:intergenic | 0.0% |
| !! | TATATATATATATATATATA+TGG | - | chr5_2:18741839-18741858 | None:intergenic | 0.0% |
| !! | TATATATATATATATATATA+TGG | + | chr5_2:18741839-18741858 | Msa0761430:intron | 0.0% |
| !!! | AAATATAATTCTTTTTCTTT+TGG | + | chr5_2:18742328-18742347 | Msa0761430:intron | 10.0% |
| !!! | AATATAATTCTTTTTCTTTT+GGG | + | chr5_2:18742329-18742348 | Msa0761430:intron | 10.0% |
| !! | TAAAAATAAAGTAATTAAAC+AGG | + | chr5_2:18742401-18742420 | Msa0761430:intron | 10.0% |
| !!! | CATATTAGATATTTTAATTA+TGG | - | chr5_2:18742614-18742633 | None:intergenic | 10.0% |
| !! | TTAATTATATACTAATTACT+AGG | + | chr5_2:18742828-18742847 | Msa0761430:intron | 10.0% |
| !! | TAATTATAAACATATTAATG+TGG | + | chr5_2:18742928-18742947 | Msa0761430:intron | 10.0% |
| !! | TTTGATTGAATAAAATTATA+AGG | - | chr5_2:18744940-18744959 | None:intergenic | 10.0% |
| !! | AAAAAATAGGTTTATAATTA+GGG | - | chr5_2:18746012-18746031 | None:intergenic | 10.0% |
| !! | AAAAAAATAGGTTTATAATT+AGG | - | chr5_2:18746013-18746032 | None:intergenic | 10.0% |
| !!! | AGATAATGAAATTATTTTAA+AGG | - | chr5_2:18746542-18746561 | None:intergenic | 10.0% |
| !! | AAAAGAAAGATTAAGAAATA+TGG | - | chr5_2:18741204-18741223 | None:intergenic | 15.0% |
| !! | AAAACATAGAAGATAAATAA+AGG | - | chr5_2:18741729-18741748 | None:intergenic | 15.0% |
| !!! | CTATGTTTTTTATTTTTTTG+TGG | + | chr5_2:18741740-18741759 | Msa0761430:intron | 15.0% |
| !! | TAATCAAAATTGTGAATTAA+TGG | - | chr5_2:18742036-18742055 | None:intergenic | 15.0% |
| !!! | ATATAATTCTTTTTCTTTTG+GGG | + | chr5_2:18742330-18742349 | Msa0761430:intron | 15.0% |
| !!! | TTTGTTGTTATACAAATATA+AGG | + | chr5_2:18742361-18742380 | Msa0761430:intron | 15.0% |
| !!! | TTGTTGTTATACAAATATAA+GGG | + | chr5_2:18742362-18742381 | Msa0761430:intron | 15.0% |
| !!! | AAAAGGGTATTTTATTTTAA+AGG | + | chr5_2:18742527-18742546 | Msa0761430:intron | 15.0% |
| !!! | AAAGGGTATTTTATTTTAAA+GGG | + | chr5_2:18742528-18742547 | Msa0761430:intron | 15.0% |
| !!! | ATTTTATTTTAAAGGGAAAT+TGG | + | chr5_2:18742535-18742554 | Msa0761430:intron | 15.0% |
| !!! | GATATTTTAATTATGGTAAA+GGG | - | chr5_2:18742607-18742626 | None:intergenic | 15.0% |
| !!! | AGATATTTTAATTATGGTAA+AGG | - | chr5_2:18742608-18742627 | None:intergenic | 15.0% |
| !!! | TAAAATATCTAATATGCTTT+TGG | + | chr5_2:18742618-18742637 | Msa0761430:intron | 15.0% |
| !!! | AATAATTTTGCCAAATAATT+GGG | - | chr5_2:18743696-18743715 | None:intergenic | 15.0% |
| !!! | AAATAATTTTGCCAAATAAT+TGG | - | chr5_2:18743697-18743716 | None:intergenic | 15.0% |
| !!! | TTCTCTAAGTTTTATTTTAT+CGG | - | chr5_2:18744597-18744616 | None:intergenic | 15.0% |
| !! | TTTCTTTACAATATTCATTA+GGG | + | chr5_2:18745090-18745109 | Msa0761430:intron | 15.0% |
| !! | TTATAAAAAATATTGTACCT+GGG | + | chr5_2:18745324-18745343 | Msa0761430:CDS | 15.0% |
| !!! | TGTGATATTATTTTGATTAT+TGG | - | chr5_2:18745447-18745466 | None:intergenic | 15.0% |
| !! | TGAAATATATATTCTATGAT+AGG | + | chr5_2:18746111-18746130 | Msa0761430:intron | 15.0% |
| !!! | TAATATATACTTGAATGTTT+TGG | + | chr5_2:18746726-18746745 | Msa0761430:intron | 15.0% |
| !! | TTGAGACAAATAAAATCATA+AGG | + | chr5_2:18741292-18741311 | Msa0761430:intron | 20.0% |
| !! | AAATGACTCTTTATTACAAT+TGG | + | chr5_2:18741972-18741991 | Msa0761430:intron | 20.0% |
| !! | CAATTATACTATATCAACAA+TGG | + | chr5_2:18742003-18742022 | Msa0761430:intron | 20.0% |
| !!! | TATAATTCTTTTTCTTTTGG+GGG | + | chr5_2:18742331-18742350 | Msa0761430:intron | 20.0% |
| !!! | TTCTTTTCCTATTAGTTTTA+GGG | - | chr5_2:18742577-18742596 | None:intergenic | 20.0% |
| !!! | TTTCTTTTCCTATTAGTTTT+AGG | - | chr5_2:18742578-18742597 | None:intergenic | 20.0% |
| !! | AATAGGACAAATATACAAAA+AGG | - | chr5_2:18742656-18742675 | None:intergenic | 20.0% |
| !!! | AAAAAGTAGCATTGAAAAAT+AGG | - | chr5_2:18742690-18742709 | None:intergenic | 20.0% |
| !!! | TTTTGAAACAAAAATGCTTA+AGG | + | chr5_2:18742852-18742871 | Msa0761430:intron | 20.0% |
| !!! | TAGTGAAGAAATATTTTGAT+TGG | + | chr5_2:18742898-18742917 | Msa0761430:intron | 20.0% |
| !! | ATTGTAAATCTTTATATTGC+TGG | + | chr5_2:18742955-18742974 | Msa0761430:intron | 20.0% |
| !!! | GATTTTCTTAAATGATTTTC+AGG | + | chr5_2:18743147-18743166 | Msa0761430:intron | 20.0% |
| !! | AATTAAGTCCAAAATTGAAT+AGG | - | chr5_2:18743297-18743316 | None:intergenic | 20.0% |
| !!! | TATGCTTTGTTATTATTACT+AGG | + | chr5_2:18743375-18743394 | Msa0761430:intron | 20.0% |
| !! | TTATTTATGAACATGTTTCT+TGG | + | chr5_2:18743711-18743730 | Msa0761430:intron | 20.0% |
| !!! | CTATTAAAGTTGATCAAATA+AGG | + | chr5_2:18743868-18743887 | Msa0761430:CDS | 20.0% |
| !!! | TTTTTTTATAGTTAGTTACC+TGG | - | chr5_2:18743916-18743935 | None:intergenic | 20.0% |
| !! | ATATAACAAGAGCTAATATT+TGG | - | chr5_2:18743982-18744001 | None:intergenic | 20.0% |
| !!! | AATAGGTTTATGCTTTTTTT+TGG | + | chr5_2:18744182-18744201 | Msa0761430:intron | 20.0% |
| !!! | ATAGGTTTATGCTTTTTTTT+GGG | + | chr5_2:18744183-18744202 | Msa0761430:intron | 20.0% |
| !! | AATAGGTTTATATTAGTACA+TGG | + | chr5_2:18744234-18744253 | Msa0761430:intron | 20.0% |
| !! | CATGCAAATAAATTTATGAA+TGG | + | chr5_2:18744279-18744298 | Msa0761430:intron | 20.0% |
| !!! | TTTTATTTTATCGGTGAAAT+TGG | - | chr5_2:18744588-18744607 | None:intergenic | 20.0% |
| !!! | AGACTTATAAAAAGGTTTTT+GGG | + | chr5_2:18744717-18744736 | Msa0761430:CDS | 20.0% |
| !! | AAGATCAATTTAAATCTCTA+TGG | + | chr5_2:18744774-18744793 | Msa0761430:CDS | 20.0% |
| !! | CTTTCTTTACAATATTCATT+AGG | + | chr5_2:18745089-18745108 | Msa0761430:intron | 20.0% |
| !! | TTCTTTACAATATTCATTAG+GGG | + | chr5_2:18745091-18745110 | Msa0761430:intron | 20.0% |
| !! | TGAATTATATACAAATTCAC+AGG | + | chr5_2:18745259-18745278 | Msa0761430:intron | 20.0% |
| !! | GAATTATATACAAATTCACA+GGG | + | chr5_2:18745260-18745279 | Msa0761430:intron | 20.0% |
| !!! | TTATAACAAAGTTTCCATTT+TGG | - | chr5_2:18745310-18745329 | None:intergenic | 20.0% |
| !! | GTTATAAAAAATATTGTACC+TGG | + | chr5_2:18745323-18745342 | Msa0761430:CDS | 20.0% |
| !! | TAACTGTTTAGTTAATAGTT+TGG | - | chr5_2:18745531-18745550 | None:intergenic | 20.0% |
| !! | AGAGTTGTTATATATAAAGA+AGG | + | chr5_2:18746041-18746060 | Msa0761430:intron | 20.0% |
| !! | GAGTTGTTATATATAAAGAA+GGG | + | chr5_2:18746042-18746061 | Msa0761430:intron | 20.0% |
| !! | ATATATTCTATGATAGGTTT+AGG | + | chr5_2:18746117-18746136 | Msa0761430:intron | 20.0% |
| !! | TAAACTTCAATTATATATGC+AGG | + | chr5_2:18746308-18746327 | Msa0761430:intron | 20.0% |
| !! | GAGAATATATTATCTTACAT+TGG | - | chr5_2:18746701-18746720 | None:intergenic | 20.0% |
| !! | GAATGAGATATGTTCTAAAT+AGG | - | chr5_2:18741174-18741193 | None:intergenic | 25.0% |
| !! | ATTTAGAACATATCTCATTC+AGG | + | chr5_2:18741174-18741193 | Msa0761430:CDS | 25.0% |
| !!! | CTGCTTAGAGTTTTAAATAA+CGG | + | chr5_2:18741340-18741359 | Msa0761430:intron | 25.0% |
| !! | ATGTAATCCTTCTCTATTTT+TGG | - | chr5_2:18741556-18741575 | None:intergenic | 25.0% |
| !! | CCATGATTCTTCTATTTTAT+TGG | - | chr5_2:18741596-18741615 | None:intergenic | 25.0% |
| ! | CCAATAAAATAGAAGAATCA+TGG | + | chr5_2:18741593-18741612 | Msa0761430:intron | 25.0% |
| !!! | AGAATCATGGTTTTAGTATA+TGG | + | chr5_2:18741606-18741625 | Msa0761430:intron | 25.0% |
| !!! | AATTTTTTCTGAGAAGACAT+GGG | - | chr5_2:18741638-18741657 | None:intergenic | 25.0% |
| !!! | AAATTTTTTCTGAGAAGACA+TGG | - | chr5_2:18741639-18741658 | None:intergenic | 25.0% |
| ! | TCTTTATTACAATTGGATAC+AGG | + | chr5_2:18741979-18741998 | Msa0761430:intron | 25.0% |
| !!! | TCCTATAGACTTTACTTTTA+CGG | + | chr5_2:18742099-18742118 | Msa0761430:intron | 25.0% |
| ! | AATAAAATCATAGTGCTTTG+AGG | - | chr5_2:18742153-18742172 | None:intergenic | 25.0% |
| ! | AGTAATTAAACAGGATGTAT+AGG | + | chr5_2:18742410-18742429 | Msa0761430:intron | 25.0% |
| ! | AGATTCCAATATTCCAATAT+AGG | + | chr5_2:18742498-18742517 | Msa0761430:intron | 25.0% |
| ! | GATTCCAATATTCCAATATA+GGG | + | chr5_2:18742499-18742518 | Msa0761430:intron | 25.0% |
| !!! | TTATTTTAAAGGGAAATTGG+AGG | + | chr5_2:18742538-18742557 | Msa0761430:intron | 25.0% |
| !! | TAGCATTGAAAAATAGGAAA+GGG | - | chr5_2:18742684-18742703 | None:intergenic | 25.0% |
| ! | AACTGCGATTCAAAATATAT+AGG | + | chr5_2:18743069-18743088 | Msa0761430:intron | 25.0% |
| !!! | TTTCTTAAATGATTTTCAGG+TGG | + | chr5_2:18743150-18743169 | Msa0761430:intron | 25.0% |
| !!! | TTTTTGGCAAAACATTTCAA+AGG | + | chr5_2:18743411-18743430 | Msa0761430:CDS | 25.0% |
| ! | TATAGGTATATAGTGAGAAA+AGG | + | chr5_2:18743792-18743811 | Msa0761430:intron | 25.0% |
| ! | TTTGATCAACTTTAATAGCA+GGG | - | chr5_2:18743866-18743885 | None:intergenic | 25.0% |
| ! | ATTTGATCAACTTTAATAGC+AGG | - | chr5_2:18743867-18743886 | None:intergenic | 25.0% |
| !! | GAGACTTATAAAAAGGTTTT+TGG | + | chr5_2:18744716-18744735 | Msa0761430:CDS | 25.0% |
| ! | GAATTCAAGTAAACAAAGAT+AGG | - | chr5_2:18744743-18744762 | None:intergenic | 25.0% |
| ! | GGGAGTAAATAAATAAATCA+TGG | - | chr5_2:18744841-18744860 | None:intergenic | 25.0% |
| ! | GTCATTGCATACTAATAAAT+GGG | - | chr5_2:18744861-18744880 | None:intergenic | 25.0% |
| ! | TGTCATTGCATACTAATAAA+TGG | - | chr5_2:18744862-18744881 | None:intergenic | 25.0% |
| ! | TCTTTACAATATTCATTAGG+GGG | + | chr5_2:18745092-18745111 | Msa0761430:intron | 25.0% |
| ! | TTACCTGGTTTAATTGTAAT+TGG | - | chr5_2:18745407-18745426 | None:intergenic | 25.0% |
| ! | ATTTATTTGCAAACTTTACC+TGG | - | chr5_2:18745422-18745441 | None:intergenic | 25.0% |
| !! | CGTCACTAGTAATAATTTTT+CGG | - | chr5_2:18745476-18745495 | None:intergenic | 25.0% |
| ! | GACGTAATTAGTTAATAAGT+TGG | + | chr5_2:18745492-18745511 | Msa0761430:intron | 25.0% |
| ! | AATTTACGAACTAACAAGAT+AGG | + | chr5_2:18745582-18745601 | Msa0761430:intron | 25.0% |
| ! | GTAACAATGTGTATATATGT+AGG | + | chr5_2:18745751-18745770 | Msa0761430:intron | 25.0% |
| ! | GAACGTCAACTATTTAATAA+TGG | - | chr5_2:18745949-18745968 | None:intergenic | 25.0% |
| !! | ATATATTTCATTCGAGTTAG+TGG | - | chr5_2:18746101-18746120 | None:intergenic | 25.0% |
| ! | ATCAAATATAATCTTCCATG+TGG | - | chr5_2:18746362-18746381 | None:intergenic | 25.0% |
| ! | TGGAAGATTATATTTGATCA+TGG | + | chr5_2:18746364-18746383 | Msa0761430:CDS | 25.0% |
| ! | TATTGGTAAAACTTTCTTTG+TGG | - | chr5_2:18746669-18746688 | None:intergenic | 25.0% |
| ! | TACATTGGAGTATACTTTAT+TGG | - | chr5_2:18746686-18746705 | None:intergenic | 25.0% |
| ! | TAAACAACCAATATAATCCA+TGG | - | chr5_2:18746853-18746872 | None:intergenic | 25.0% |
| !! | AATCAAGATTTGACTCATTT+TGG | + | chr5_2:18746930-18746949 | Msa0761430:CDS | 25.0% |
| ! | GAGTTCTATATGATTATATC+CGG | + | chr5_2:18746957-18746976 | Msa0761430:CDS | 25.0% |
| TAGAGAATCACAATCAAATG+CGG | + | chr5_2:18741404-18741423 | Msa0761430:intron | 30.0% | |
| TTCAAATTGCAACACAATCA+CGG | - | chr5_2:18741445-18741464 | None:intergenic | 30.0% | |
| TTTGAACAACCATTACATTG+CGG | + | chr5_2:18741459-18741478 | Msa0761430:intron | 30.0% | |
| ! | GCATGCACATTTTTAAACAA+AGG | - | chr5_2:18741507-18741526 | None:intergenic | 30.0% |
| !!! | AATCCTTCTCTATTTTTGGT+AGG | - | chr5_2:18741552-18741571 | None:intergenic | 30.0% |
| !!! | ATCATGGTTTTAGTATATGG+TGG | + | chr5_2:18741609-18741628 | Msa0761430:intron | 30.0% |
| ACCGTAAAAGTAAAGTCTAT+AGG | - | chr5_2:18742103-18742122 | None:intergenic | 30.0% | |
| AGAATAACGATATTTGCACT+TGG | - | chr5_2:18742443-18742462 | None:intergenic | 30.0% | |
| AAGCATTCCCTAAAACTAAT+AGG | + | chr5_2:18742567-18742586 | Msa0761430:intron | 30.0% | |
| ! | AGCATTGAAAAATAGGAAAG+GGG | - | chr5_2:18742683-18742702 | None:intergenic | 30.0% |
| ! | GTAGCATTGAAAAATAGGAA+AGG | - | chr5_2:18742685-18742704 | None:intergenic | 30.0% |
| ! | TTTTGACGATTAATAGTGAC+TGG | - | chr5_2:18742797-18742816 | None:intergenic | 30.0% |
| ATATTGCTGGAAAAATCCAA+CGG | + | chr5_2:18742968-18742987 | Msa0761430:intron | 30.0% | |
| GTCTTAGGAATATCATATTC+TGG | + | chr5_2:18743223-18743242 | Msa0761430:CDS | 30.0% | |
| ! | AGGAATATCATATTCTGGAA+TGG | + | chr5_2:18743228-18743247 | Msa0761430:CDS | 30.0% |
| ATGGAAAATGTACTTGAATC+TGG | + | chr5_2:18743247-18743266 | Msa0761430:CDS | 30.0% | |
| GAAATGAAGATGATGATAGA+GGG | + | chr5_2:18743269-18743288 | Msa0761430:CDS | 30.0% | |
| ! | TGTTGATGAATATAAGCTTG+TGG | - | chr5_2:18743321-18743340 | None:intergenic | 30.0% |
| !! | TAGTGGAGGTTTCATTTTTA+AGG | + | chr5_2:18743604-18743623 | Msa0761430:CDS | 30.0% |
| !! | AGTGGAGGTTTCATTTTTAA+GGG | + | chr5_2:18743605-18743624 | Msa0761430:CDS | 30.0% |
| ACCTTTGGTCTATGTTTATA+GGG | - | chr5_2:18743662-18743681 | None:intergenic | 30.0% | |
| AAATCCTAGTCCCAATTATT+TGG | + | chr5_2:18743683-18743702 | Msa0761430:intron | 30.0% | |
| ATATGGCCATATCAGATATT+AGG | + | chr5_2:18744043-18744062 | Msa0761430:CDS | 30.0% | |
| TCTTTGCCTAATATCTGATA+TGG | - | chr5_2:18744052-18744071 | None:intergenic | 30.0% | |
| AGATATTAGGCAAAGAAGAA+TGG | + | chr5_2:18744056-18744075 | Msa0761430:CDS | 30.0% | |
| TCAATGAAAGATAGAGATGA+CGG | + | chr5_2:18744081-18744100 | Msa0761430:CDS | 30.0% | |
| CCTTTAAATTGTGGATTTGA+TGG | - | chr5_2:18744147-18744166 | None:intergenic | 30.0% | |
| CCATCAAATCCACAATTTAA+AGG | + | chr5_2:18744144-18744163 | Msa0761430:CDS | 30.0% | |
| AAATCCACAATTTAAAGGAG+AGG | + | chr5_2:18744149-18744168 | Msa0761430:CDS | 30.0% | |
| GGAGAGGTAACTAAATAAAT+AGG | + | chr5_2:18744165-18744184 | Msa0761430:intron | 30.0% | |
| !! | CTCAATTTGGTGCTATTAAT+AGG | + | chr5_2:18744217-18744236 | Msa0761430:intron | 30.0% |
| AACCAATTCAACCAAGTTAA+TGG | + | chr5_2:18744348-18744367 | Msa0761430:CDS | 30.0% | |
| ! | ATCCATTAACTTGGTTGAAT+TGG | - | chr5_2:18744353-18744372 | None:intergenic | 30.0% |
| AATTCAACCAAGTTAATGGA+TGG | + | chr5_2:18744352-18744371 | Msa0761430:CDS | 30.0% | |
| TAAGTTCAACACATCAAAGA+TGG | + | chr5_2:18744496-18744515 | Msa0761430:intron | 30.0% | |
| AAGTTCAACACATCAAAGAT+GGG | + | chr5_2:18744497-18744516 | Msa0761430:intron | 30.0% | |
| CATGAAAAACCAGAACTAAA+CGG | - | chr5_2:18744562-18744581 | None:intergenic | 30.0% | |
| ! | TTTTATAAGTCTCTCCTTCT+TGG | - | chr5_2:18744709-18744728 | None:intergenic | 30.0% |
| AGAAGGAGAGACTTATAAAA+AGG | + | chr5_2:18744709-18744728 | Msa0761430:CDS | 30.0% | |
| CTTTACAATATTCATTAGGG+GGG | + | chr5_2:18745093-18745112 | Msa0761430:intron | 30.0% | |
| TTTACAATATTCATTAGGGG+GGG | + | chr5_2:18745094-18745113 | Msa0761430:intron | 30.0% | |
| AATGCTAAGAATGCATACAT+TGG | + | chr5_2:18745127-18745146 | Msa0761430:CDS | 30.0% | |
| TCTCCAATTACAATTAAACC+AGG | + | chr5_2:18745401-18745420 | Msa0761430:CDS | 30.0% | |
| GTATATAATCCTCCAAGAAA+TGG | + | chr5_2:18745799-18745818 | Msa0761430:CDS | 30.0% | |
| ATAATGGTTTAGAGACTAAC+TGG | - | chr5_2:18745933-18745952 | None:intergenic | 30.0% | |
| ! | CTCTTTTGCGCTAAAAAAAT+AGG | - | chr5_2:18746025-18746044 | None:intergenic | 30.0% |
| TATATATAAAGAAGGGACAG+AGG | + | chr5_2:18746049-18746068 | Msa0761430:intron | 30.0% | |
| TATGATAGGTTTAGGCAATA+TGG | + | chr5_2:18746125-18746144 | Msa0761430:intron | 30.0% | |
| TTAGTAACTATCGAAAGGAT+TGG | + | chr5_2:18746207-18746226 | Msa0761430:CDS | 30.0% | |
| ! | CTTGTTTAAGTGTCATGTTT+TGG | + | chr5_2:18746283-18746302 | Msa0761430:intron | 30.0% |
| GTGGTTGCTTGAAATTTATT+AGG | - | chr5_2:18746343-18746362 | None:intergenic | 30.0% | |
| ATAAATTTCAAGCAACCACA+TGG | + | chr5_2:18746344-18746363 | Msa0761430:CDS | 30.0% | |
| CGAGGACTGAAAATATATTT+AGG | - | chr5_2:18746494-18746513 | None:intergenic | 30.0% | |
| ! | TATTTTCAGTCCTCGAAATA+CGG | + | chr5_2:18746499-18746518 | Msa0761430:intron | 30.0% |
| ! | AATACGGTAGTTATTGCTTT+TGG | + | chr5_2:18746515-18746534 | Msa0761430:intron | 30.0% |
| ! | ATTCTCTTTGTTGTGAAGTA+GGG | - | chr5_2:18746797-18746816 | None:intergenic | 30.0% |
| ! | TATTCTCTTTGTTGTGAAGT+AGG | - | chr5_2:18746798-18746817 | None:intergenic | 30.0% |
| TACTTCACAACAAAGAGAAT+AGG | + | chr5_2:18746797-18746816 | Msa0761430:CDS | 30.0% | |
| ! | ATGGAATCCATGGATTATAT+TGG | + | chr5_2:18746843-18746862 | Msa0761430:CDS | 30.0% |
| ! | TTGCAACTTTGTTTCACGTT+TGG | + | chr5_2:18741146-18741165 | Msa0761430:CDS | 35.0% |
| GAAGCAAGATCAAGCAAATA+TGG | - | chr5_2:18741235-18741254 | None:intergenic | 35.0% | |
| CTTCCTACCAAAAATAGAGA+AGG | + | chr5_2:18741546-18741565 | Msa0761430:intron | 35.0% | |
| !! | TGCAATTACTTTTACACGTC+TGG | + | chr5_2:18741918-18741937 | Msa0761430:intron | 35.0% |
| ! | ACTATATGAGAGTGTGTCAT+GGG | - | chr5_2:18742180-18742199 | None:intergenic | 35.0% |
| ! | TACTATATGAGAGTGTGTCA+TGG | - | chr5_2:18742181-18742200 | None:intergenic | 35.0% |
| ! | TCGTTATTCTGTCACTTCTA+AGG | + | chr5_2:18742453-18742472 | Msa0761430:intron | 35.0% |
| ! | CGTTATTCTGTCACTTCTAA+GGG | + | chr5_2:18742454-18742473 | Msa0761430:intron | 35.0% |
| ! | GTTATTCTGTCACTTCTAAG+GGG | + | chr5_2:18742455-18742474 | Msa0761430:intron | 35.0% |
| AGCACCCTATATTGGAATAT+TGG | - | chr5_2:18742506-18742525 | None:intergenic | 35.0% | |
| ! | TCCAATATAGGGTGCTAAAA+AGG | + | chr5_2:18742510-18742529 | Msa0761430:intron | 35.0% |
| ! | CCAATATAGGGTGCTAAAAA+GGG | + | chr5_2:18742511-18742530 | Msa0761430:intron | 35.0% |
| AATAGGAAAGGGGAAACAAT+AGG | - | chr5_2:18742673-18742692 | None:intergenic | 35.0% | |
| TAATCGTCAAAATTCACAGC+AGG | + | chr5_2:18742805-18742824 | Msa0761430:CDS | 35.0% | |
| GGAAATGAAGATGATGATAG+AGG | + | chr5_2:18743268-18743287 | Msa0761430:CDS | 35.0% | |
| !!! | AGAGGGTACCTATTCAATTT+TGG | + | chr5_2:18743286-18743305 | Msa0761430:intron | 35.0% |
| !! | AGGTACTTTGACGTTGTTTT+TGG | + | chr5_2:18743395-18743414 | Msa0761430:intron | 35.0% |
| AACACAGAACGAGAATATAG+TGG | + | chr5_2:18743587-18743606 | Msa0761430:CDS | 35.0% | |
| !! | AGGTTTCATTTTTAAGGGCA+TGG | + | chr5_2:18743610-18743629 | Msa0761430:CDS | 35.0% |
| TCCCTATAAACATAGACCAA+AGG | + | chr5_2:18743658-18743677 | Msa0761430:CDS | 35.0% | |
| CACCTTTGGTCTATGTTTAT+AGG | - | chr5_2:18743663-18743682 | None:intergenic | 35.0% | |
| TTTGCCAAATAATTGGGACT+AGG | - | chr5_2:18743690-18743709 | None:intergenic | 35.0% | |
| ! | TTCTGGATTTTACACTTACG+TGG | + | chr5_2:18743818-18743837 | Msa0761430:CDS | 35.0% |
| ! | TTAATAGCAGGGAATCCTTT+TGG | - | chr5_2:18743855-18743874 | None:intergenic | 35.0% |
| ! | TAGAGATGACGGTCAAAAAT+TGG | + | chr5_2:18744092-18744111 | Msa0761430:CDS | 35.0% |
| GTTACCTCTCCTTTAAATTG+TGG | - | chr5_2:18744156-18744175 | None:intergenic | 35.0% | |
| !! | GGTGTCATTTCTACTCAATT+TGG | + | chr5_2:18744204-18744223 | Msa0761430:intron | 35.0% |
| GAATGGTTTATGTTGCACTT+AGG | + | chr5_2:18744296-18744315 | Msa0761430:intron | 35.0% | |
| CTGTAATCCATCCATTAACT+TGG | - | chr5_2:18744362-18744381 | None:intergenic | 35.0% | |
| AGATGTGAGATCTTGCTTAA+CGG | - | chr5_2:18744451-18744470 | None:intergenic | 35.0% | |
| ATGGACAGATGCTAAACAAA+AGG | + | chr5_2:18744793-18744812 | Msa0761430:CDS | 35.0% | |
| ! | TATCGACTGAACTCAAAAGT+TGG | + | chr5_2:18744914-18744933 | Msa0761430:CDS | 35.0% |
| ! | ATTCACAGGGCTATCAATTT+TGG | + | chr5_2:18745273-18745292 | Msa0761430:intron | 35.0% |
| ! | GTCATACAACTTGTTTGCAT+GGG | + | chr5_2:18745346-18745365 | Msa0761430:CDS | 35.0% |
| TTGTAATCTCCAATATAGCC+AGG | - | chr5_2:18745374-18745393 | None:intergenic | 35.0% | |
| AGATAGGATAACCGTAGAAA+TGG | + | chr5_2:18745598-18745617 | Msa0761430:intron | 35.0% | |
| ACTTTATTAGAGACGCAATG+GGG | - | chr5_2:18745653-18745672 | None:intergenic | 35.0% | |
| GACTTTATTAGAGACGCAAT+GGG | - | chr5_2:18745654-18745673 | None:intergenic | 35.0% | |
| TGACTTTATTAGAGACGCAA+TGG | - | chr5_2:18745655-18745674 | None:intergenic | 35.0% | |
| ATTGCGTCTCTAATAAAGTC+AGG | + | chr5_2:18745654-18745673 | Msa0761430:intron | 35.0% | |
| !! | TACGAGTGAATTCAAGTTGA+TGG | - | chr5_2:18745782-18745801 | None:intergenic | 35.0% |
| TTGTGAATAATCTGTTCACG+AGG | - | chr5_2:18745897-18745916 | None:intergenic | 35.0% | |
| TTGGATATAGATCGCTGTAA+CGG | - | chr5_2:18746160-18746179 | None:intergenic | 35.0% | |
| ! | TGGTGTTAGTAACTATCGAA+AGG | + | chr5_2:18746202-18746221 | Msa0761430:CDS | 35.0% |
| CAACAGAAAGCTAATTACCT+TGG | - | chr5_2:18746248-18746267 | None:intergenic | 35.0% | |
| ! | AATTATATATGCAGGAGCAC+AGG | + | chr5_2:18746316-18746335 | Msa0761430:intron | 35.0% |
| ATGAACACTAGGTACTTCTA+TGG | - | chr5_2:18746876-18746895 | None:intergenic | 35.0% | |
| !! | AGAAGTACCTAGTGTTCATT+TGG | + | chr5_2:18746877-18746896 | Msa0761430:CDS | 35.0% |
| ! | CCTTTTACCAAATGAACACT+AGG | - | chr5_2:18746887-18746906 | None:intergenic | 35.0% |
| CCTAGTGTTCATTTGGTAAA+AGG | + | chr5_2:18746884-18746903 | Msa0761430:CDS | 35.0% | |
| !! | AGATTTGACTCATTTTGGCA+AGG | + | chr5_2:18746935-18746954 | Msa0761430:CDS | 35.0% |
| TTGTTGAAGGACTTTCTAAC+CGG | - | chr5_2:18746979-18746998 | None:intergenic | 35.0% | |
| TGAAGATGAACATGTGTGGA+AGG | + | chr5_2:18741093-18741112 | Msa0761430:CDS | 40.0% | |
| GAAGATGAACATGTGTGGAA+GGG | + | chr5_2:18741094-18741113 | Msa0761430:CDS | 40.0% | |
| ! | CTTGTTGTGGTGGTACATAA+TGG | + | chr5_2:18741121-18741140 | Msa0761430:CDS | 40.0% |
| GGTTGCACTAACAATTGCAA+CGG | + | chr5_2:18741361-18741380 | Msa0761430:intron | 40.0% | |
| CAATCTGAACCGCAATGTAA+TGG | - | chr5_2:18741471-18741490 | None:intergenic | 40.0% | |
| AGTGAAATGTTGCATGCAGA+TGG | - | chr5_2:18741700-18741719 | None:intergenic | 40.0% | |
| TATGGACACACATTGTCAGA+TGG | - | chr5_2:18741821-18741840 | None:intergenic | 40.0% | |
| !! | AGGAGCATTCAATGTGTATG+TGG | - | chr5_2:18742133-18742152 | None:intergenic | 40.0% |
| !! | CCCTTTTTAGCACCCTATAT+TGG | - | chr5_2:18742514-18742533 | None:intergenic | 40.0% |
| ! | TTTCAGGTGGTGATTAGCAA+TGG | + | chr5_2:18743163-18743182 | Msa0761430:intron | 40.0% |
| TGGTATCATGTCCCTTACTT+TGG | + | chr5_2:18743183-18743202 | Msa0761430:CDS | 40.0% | |
| AATTACCATTGCAGAGTCCA+TGG | + | chr5_2:18743546-18743565 | Msa0761430:intron | 40.0% | |
| ACAGAACGAGAATATAGTGG+AGG | + | chr5_2:18743590-18743609 | Msa0761430:CDS | 40.0% | |
| ATAGTGAGAAAAGGCGATTC+TGG | + | chr5_2:18743801-18743820 | Msa0761430:CDS | 40.0% | |
| GTGGTATTTGAACGACCAAA+AGG | + | chr5_2:18743837-18743856 | Msa0761430:CDS | 40.0% | |
| !! | AAGGACCGTTTTTAAACCCA+AGG | + | chr5_2:18743887-18743906 | Msa0761430:CDS | 40.0% |
| GGCTTCCTTGGGTTTAAAAA+CGG | - | chr5_2:18743895-18743914 | None:intergenic | 40.0% | |
| ! | TTTTTAAACCCAAGGAAGCC+AGG | + | chr5_2:18743895-18743914 | Msa0761430:CDS | 40.0% |
| TGCATGCAGCTTCAACTATA+TGG | + | chr5_2:18744026-18744045 | Msa0761430:intron | 40.0% | |
| TGTGTTAAGAGAACAGCTTC+AGG | - | chr5_2:18744123-18744142 | None:intergenic | 40.0% | |
| TGGTTTATGTTGCACTTAGG+TGG | + | chr5_2:18744299-18744318 | Msa0761430:intron | 40.0% | |
| ! | TTGGTTGAATTGGTTCTCAG+TGG | - | chr5_2:18744343-18744362 | None:intergenic | 40.0% |
| ! | AGCAGATTCTGAAAAACCTG+TGG | + | chr5_2:18744380-18744399 | Msa0761430:CDS | 40.0% |
| ! | GCAGATTCTGAAAAACCTGT+GGG | + | chr5_2:18744381-18744400 | Msa0761430:CDS | 40.0% |
| ! | CTGAAAAACCTGTGGGTTTT+TGG | + | chr5_2:18744388-18744407 | Msa0761430:CDS | 40.0% |
| GTTATGATCCAAAAACCCAC+AGG | - | chr5_2:18744399-18744418 | None:intergenic | 40.0% | |
| GATGTGAGATCTTGCTTAAC+GGG | - | chr5_2:18744450-18744469 | None:intergenic | 40.0% | |
| CAAGATCTCACATCTCATGT+TGG | + | chr5_2:18744456-18744475 | Msa0761430:CDS | 40.0% | |
| AACTTACAGAGAGGCAAGTT+GGG | - | chr5_2:18744482-18744501 | None:intergenic | 40.0% | |
| GATGTGTTGAACTTACAGAG+AGG | - | chr5_2:18744491-18744510 | None:intergenic | 40.0% | |
| ! | ACATATCGTCCGTTTAGTTC+TGG | + | chr5_2:18744550-18744569 | Msa0761430:intron | 40.0% |
| AAGTCTCTCCTTCTTGGAAT+TGG | - | chr5_2:18744703-18744722 | None:intergenic | 40.0% | |
| TTCATTCCACCTAATCAACG+TGG | + | chr5_2:18744964-18744983 | Msa0761430:CDS | 40.0% | |
| GACTTGTAAATGTCCGGTTA+GGG | - | chr5_2:18744992-18745011 | None:intergenic | 40.0% | |
| GTCTTGGACTTGTAAATGTC+CGG | - | chr5_2:18744998-18745017 | None:intergenic | 40.0% | |
| GGACATTTACAAGTCCAAGA+CGG | + | chr5_2:18744997-18745016 | Msa0761430:CDS | 40.0% | |
| GACATTTACAAGTCCAAGAC+GGG | + | chr5_2:18744998-18745017 | Msa0761430:CDS | 40.0% | |
| TCGTTAATGTATACCCGTCT+TGG | - | chr5_2:18745014-18745033 | None:intergenic | 40.0% | |
| ! | ATGCATACATTGGTCTAGCT+TGG | + | chr5_2:18745137-18745156 | Msa0761430:CDS | 40.0% |
| ! | GGTCATACAACTTGTTTGCA+TGG | + | chr5_2:18745345-18745364 | Msa0761430:CDS | 40.0% |
| TAGGATAACCGTAGAAATGG+TGG | + | chr5_2:18745601-18745620 | Msa0761430:intron | 40.0% | |
| AGGATAACCGTAGAAATGGT+GGG | + | chr5_2:18745602-18745621 | Msa0761430:intron | 40.0% | |
| AAGAAATGGCCCAACTGTTT+GGG | + | chr5_2:18745813-18745832 | Msa0761430:CDS | 40.0% | |
| TGCCAATTTCCCAAACAGTT+GGG | - | chr5_2:18745825-18745844 | None:intergenic | 40.0% | |
| ATGCCAATTTCCCAAACAGT+TGG | - | chr5_2:18745826-18745845 | None:intergenic | 40.0% | |
| ! | GTTTAGAGACTAACTGGTCT+GGG | - | chr5_2:18745927-18745946 | None:intergenic | 40.0% |
| GGACAGAGATAGTAGAAACT+GGG | - | chr5_2:18745991-18746010 | None:intergenic | 40.0% | |
| ATATAAAGAAGGGACAGAGG+TGG | + | chr5_2:18746052-18746071 | Msa0761430:intron | 40.0% | |
| GGTTTAGGCAATATGGTCTA+TGG | + | chr5_2:18746132-18746151 | Msa0761430:intron | 40.0% | |
| GTGTAAACAAGATCCTGAGT+TGG | - | chr5_2:18746179-18746198 | None:intergenic | 40.0% | |
| ! | CAGGATCTTGTTTACACAGT+TGG | + | chr5_2:18746182-18746201 | Msa0761430:CDS | 40.0% |
| !! | GGTTTTATGCTCATGTTCCA+AGG | + | chr5_2:18746228-18746247 | Msa0761430:CDS | 40.0% |
| !! | GATCATGGTGCTGTAATAAG+TGG | + | chr5_2:18746379-18746398 | Msa0761430:CDS | 40.0% |
| GCAATAACTACCGTATTTCG+AGG | - | chr5_2:18746512-18746531 | None:intergenic | 40.0% | |
| ACTGACAAGCATCATAGAGA+GGG | - | chr5_2:18746604-18746623 | None:intergenic | 40.0% | |
| GTCAGTCATGTATCTCTATG+TGG | + | chr5_2:18746618-18746637 | Msa0761430:intron | 40.0% | |
| !! | GTTTTGGATGATGTGTGATC+AGG | + | chr5_2:18746742-18746761 | Msa0761430:intron | 40.0% |
| GGTTTCAACTTGGTTGTTGA+AGG | - | chr5_2:18746992-18747011 | None:intergenic | 40.0% | |
| TTGCAACACAATCACGGTTG+AGG | - | chr5_2:18741439-18741458 | None:intergenic | 45.0% | |
| AGATGGTGCAGGGGAATATT+TGG | - | chr5_2:18741804-18741823 | None:intergenic | 45.0% | |
| ACACATTGTCAGATGGTGCA+GGG | - | chr5_2:18741814-18741833 | None:intergenic | 45.0% | |
| ! | ATATGAGAGTGTGTCATGGG+TGG | - | chr5_2:18742177-18742196 | None:intergenic | 45.0% |
| ! | ATTCTGTCACTTCTAAGGGG+TGG | + | chr5_2:18742458-18742477 | Msa0761430:intron | 45.0% |
| CTGCAAGTGGAAACAATGCA+AGG | - | chr5_2:18742740-18742759 | None:intergenic | 45.0% | |
| TCTTACGCTTCTTCTGCAAG+TGG | - | chr5_2:18742753-18742772 | None:intergenic | 45.0% | |
| ! | ACTTGCAGAAGAAGCGTAAG+AGG | + | chr5_2:18742752-18742771 | Msa0761430:intron | 45.0% |
| GTGACTGGAGATTGAGCATT+AGG | - | chr5_2:18742782-18742801 | None:intergenic | 45.0% | |
| ! | GCAGTTTGAAGTCACAACTG+CGG | - | chr5_2:18743055-18743074 | None:intergenic | 45.0% |
| TATTCCTAAGACATACCCCC+CGG | - | chr5_2:18743215-18743234 | None:intergenic | 45.0% | |
| TTGTTCCATGGACTCTGCAA+TGG | - | chr5_2:18743554-18743573 | None:intergenic | 45.0% | |
| ! | CGACTGAGAAACTTGTTCCA+TGG | - | chr5_2:18743566-18743585 | None:intergenic | 45.0% |
| ! | AAGGGCATGGAGTTCTTCTA+TGG | + | chr5_2:18743623-18743642 | Msa0761430:CDS | 45.0% |
| AGGGCATGGAGTTCTTCTAT+GGG | + | chr5_2:18743624-18743643 | Msa0761430:CDS | 45.0% | |
| TGGGACTAGGATTTCACCTT+TGG | - | chr5_2:18743677-18743696 | None:intergenic | 45.0% | |
| GTTAGTTACCTGGCTTCCTT+GGG | - | chr5_2:18743906-18743925 | None:intergenic | 45.0% | |
| AGTTAGTTACCTGGCTTCCT+TGG | - | chr5_2:18743907-18743926 | None:intergenic | 45.0% | |
| GTTGAAGCTGCATGCATCAT+TGG | - | chr5_2:18744022-18744041 | None:intergenic | 45.0% | |
| CCATTGCGGAACTCATTACT+CGG | - | chr5_2:18744423-18744442 | None:intergenic | 45.0% | |
| AGTAATGAGTTCCGCAATGG+TGG | + | chr5_2:18744423-18744442 | Msa0761430:CDS | 45.0% | |
| GAACTTACAGAGAGGCAAGT+TGG | - | chr5_2:18744483-18744502 | None:intergenic | 45.0% | |
| TTTGTAAGCACCCACTATGC+TGG | + | chr5_2:18744662-18744681 | Msa0761430:CDS | 45.0% | |
| TACGTCTTTGCCAGCATAGT+GGG | - | chr5_2:18744675-18744694 | None:intergenic | 45.0% | |
| GTAGCCATCCAATTCCAAGA+AGG | + | chr5_2:18744692-18744711 | Msa0761430:CDS | 45.0% | |
| CTCTCCTTCTTGGAATTGGA+TGG | - | chr5_2:18744699-18744718 | None:intergenic | 45.0% | |
| ! | GTTAGGGTTCCACGTTGATT+AGG | - | chr5_2:18744976-18744995 | None:intergenic | 45.0% |
| AATCAACGTGGAACCCTAAC+CGG | + | chr5_2:18744976-18744995 | Msa0761430:CDS | 45.0% | |
| GGACTTGTAAATGTCCGGTT+AGG | - | chr5_2:18744993-18745012 | None:intergenic | 45.0% | |
| ATCATGGCAGAGAGAAAGCA+AGG | + | chr5_2:18745174-18745193 | Msa0761430:CDS | 45.0% | |
| ! | TGGACTAGAGCAGACCAAAA+TGG | + | chr5_2:18745293-18745312 | Msa0761430:CDS | 45.0% |
| GCAAACAAGTTGTATGACCC+AGG | - | chr5_2:18745344-18745363 | None:intergenic | 45.0% | |
| ! | AACTTGTTTGCATGGGTTCC+TGG | + | chr5_2:18745353-18745372 | Msa0761430:CDS | 45.0% |
| GGATAACCGTAGAAATGGTG+GGG | + | chr5_2:18745603-18745622 | Msa0761430:intron | 45.0% | |
| GATAACCGTAGAAATGGTGG+GGG | + | chr5_2:18745604-18745623 | Msa0761430:intron | 45.0% | |
| ! | ATAACCGTAGAAATGGTGGG+GGG | + | chr5_2:18745605-18745624 | Msa0761430:intron | 45.0% |
| TTAGAGACGCAATGGGGAAA+GGG | - | chr5_2:18745647-18745666 | None:intergenic | 45.0% | |
| ATTAGAGACGCAATGGGGAA+AGG | - | chr5_2:18745648-18745667 | None:intergenic | 45.0% | |
| CAAACAGTTGGGCCATTTCT+TGG | - | chr5_2:18745814-18745833 | None:intergenic | 45.0% | |
| CAAGAAATGGCCCAACTGTT+TGG | + | chr5_2:18745812-18745831 | Msa0761430:CDS | 45.0% | |
| GGTTTAGAGACTAACTGGTC+TGG | - | chr5_2:18745928-18745947 | None:intergenic | 45.0% | |
| GGGACAGAGATAGTAGAAAC+TGG | - | chr5_2:18745992-18746011 | None:intergenic | 45.0% | |
| CAGCGATCTATATCCAACTC+AGG | + | chr5_2:18746163-18746182 | Msa0761430:CDS | 45.0% | |
| !! | AGCATTAGAGGCACTTGCTA+GGG | - | chr5_2:18746425-18746444 | None:intergenic | 45.0% |
| TACCTGCACTTCAGCATTAG+AGG | - | chr5_2:18746437-18746456 | None:intergenic | 45.0% | |
| GACTGACAAGCATCATAGAG+AGG | - | chr5_2:18746605-18746624 | None:intergenic | 45.0% | |
| GGATGATGTGTGATCAGGTT+TGG | + | chr5_2:18746747-18746766 | Msa0761430:intron | 45.0% | |
| TGTTGTGAAGTAGGGAGGAT+TGG | - | chr5_2:18746789-18746808 | None:intergenic | 45.0% | |
| ! | CTCTTTGTTGTGAAGTAGGG+AGG | - | chr5_2:18746794-18746813 | None:intergenic | 45.0% |
| ! | GAGATGATAGTGCCATACCA+AGG | + | chr5_2:18746819-18746838 | Msa0761430:CDS | 45.0% |
| ATGGATTCCATGCCTTGGTA+TGG | - | chr5_2:18746834-18746853 | None:intergenic | 45.0% | |
| ATACCAAGGCATGGAATCCA+TGG | + | chr5_2:18746833-18746852 | Msa0761430:CDS | 45.0% | |
| AATCCATGGATTCCATGCCT+TGG | - | chr5_2:18746839-18746858 | None:intergenic | 45.0% | |
| !! | CAATAAAAAATATAAAATAA+AGG | - | chr5_2:18741675-18741694 | None:intergenic | 5.0% |
| !!! | TTGAATAAATATATTTTTAT+AGG | + | chr5_2:18743775-18743794 | Msa0761430:intron | 5.0% |
| GTGGAAGGGTTCTCTTGTTG+TGG | + | chr5_2:18741108-18741127 | Msa0761430:CDS | 50.0% | |
| ! | GAAGGGTTCTCTTGTTGTGG+TGG | + | chr5_2:18741111-18741130 | Msa0761430:CDS | 50.0% |
| CACATTGTCAGATGGTGCAG+GGG | - | chr5_2:18741813-18741832 | None:intergenic | 50.0% | |
| CACACATTGTCAGATGGTGC+AGG | - | chr5_2:18741815-18741834 | None:intergenic | 50.0% | |
| GTGATTGCGATCATCTCCGT+TGG | - | chr5_2:18742987-18743006 | None:intergenic | 50.0% | |
| TCCCTTACTTTGGCCAATCC+CGG | + | chr5_2:18743193-18743212 | Msa0761430:CDS | 50.0% | |
| ATTCCTAAGACATACCCCCC+GGG | - | chr5_2:18743214-18743233 | None:intergenic | 50.0% | |
| CCGAGTAATGAGTTCCGCAA+TGG | + | chr5_2:18744420-18744439 | Msa0761430:CDS | 50.0% | |
| CTACGTCTTTGCCAGCATAG+TGG | - | chr5_2:18744676-18744695 | None:intergenic | 50.0% | |
| ! | AGGGTTCCACGTTGATTAGG+TGG | - | chr5_2:18744973-18744992 | None:intergenic | 50.0% |
| ! | TACATTGGTCTAGCTTGGCC+TGG | + | chr5_2:18745142-18745161 | Msa0761430:CDS | 50.0% |
| ! | ACATTGGTCTAGCTTGGCCT+GGG | + | chr5_2:18745143-18745162 | Msa0761430:CDS | 50.0% |
| GCATGGGTTCCTGGCTATAT+TGG | + | chr5_2:18745362-18745381 | Msa0761430:CDS | 50.0% | |
| TAGAGACGCAATGGGGAAAG+GGG | - | chr5_2:18745646-18745665 | None:intergenic | 50.0% | |
| ACAGTTGGGCCATTTCTTGG+AGG | - | chr5_2:18745811-18745830 | None:intergenic | 50.0% | |
| GGCCCAACTGTTTGGGAAAT+TGG | + | chr5_2:18745820-18745839 | Msa0761430:CDS | 50.0% | |
| AATTCTCCAGCTGAGCGATC+TGG | - | chr5_2:18745850-18745869 | None:intergenic | 50.0% | |
| ACGAGGTTAGCGTAAGGCTT+TGG | - | chr5_2:18745880-18745899 | None:intergenic | 50.0% | |
| CTGTTCACGAGGTTAGCGTA+AGG | - | chr5_2:18745886-18745905 | None:intergenic | 50.0% | |
| !! | CAGCATTAGAGGCACTTGCT+AGG | - | chr5_2:18746426-18746445 | None:intergenic | 50.0% |
| TGCCTCTAATGCTGAAGTGC+AGG | + | chr5_2:18746432-18746451 | Msa0761430:CDS | 50.0% | |
| GATAGTGCCATACCAAGGCA+TGG | + | chr5_2:18746824-18746843 | Msa0761430:CDS | 50.0% | |
| !! | CCCGGGATTGGCCAAAGTAA+GGG | - | chr5_2:18743197-18743216 | None:intergenic | 55.0% |
| CCCTTACTTTGGCCAATCCC+GGG | + | chr5_2:18743194-18743213 | Msa0761430:CDS | 55.0% | |
| CCTTACTTTGGCCAATCCCG+GGG | + | chr5_2:18743195-18743214 | Msa0761430:CDS | 55.0% | |
| CTTACTTTGGCCAATCCCGG+GGG | + | chr5_2:18743196-18743215 | Msa0761430:CDS | 55.0% | |
| TTACTTTGGCCAATCCCGGG+GGG | + | chr5_2:18743197-18743216 | Msa0761430:CDS | 55.0% | |
| TAAGACATACCCCCCGGGAT+TGG | - | chr5_2:18743209-18743228 | None:intergenic | 55.0% | |
| ! | AATCCCGGGGGGTATGTCTT+AGG | + | chr5_2:18743208-18743227 | Msa0761430:CDS | 55.0% |
| ! | GCTTAACGGGTCCACCATTG+CGG | - | chr5_2:18744437-18744456 | None:intergenic | 55.0% |
| ! | CATTGGTCTAGCTTGGCCTG+GGG | + | chr5_2:18745144-18745163 | Msa0761430:CDS | 55.0% |
| AGAGACGCAATGGGGAAAGG+GGG | - | chr5_2:18745645-18745664 | None:intergenic | 55.0% | |
| !! | CCCCGGGATTGGCCAAAGTA+AGG | - | chr5_2:18743198-18743217 | None:intergenic | 60.0% |
| TGCCATGATCCTGCATCCCC+AGG | - | chr5_2:18745163-18745182 | None:intergenic | 60.0% | |
| AGGGCCCCCCACCATTTCTA+CGG | - | chr5_2:18745612-18745631 | None:intergenic | 60.0% | |
| GGCATTCCAGATCGCTCAGC+TGG | + | chr5_2:18745841-18745860 | Msa0761430:CDS | 60.0% | |
| CTAGCTTGGCCTGGGGATGC+AGG | + | chr5_2:18745151-18745170 | Msa0761430:CDS | 65.0% | |
| GGCCTGGGGATGCAGGATCA+TGG | + | chr5_2:18745158-18745177 | Msa0761430:CDS | 65.0% | |
| AATGGGGAAAGGGGGAGCGG+CGG | - | chr5_2:18745637-18745656 | None:intergenic | 65.0% | |
| CGCAATGGGGAAAGGGGGAG+CGG | - | chr5_2:18745640-18745659 | None:intergenic | 65.0% | |
| ATGGGGAAAGGGGGAGCGGC+GGG | - | chr5_2:18745636-18745655 | None:intergenic | 70.0% | |
| GAAAGGGGGAGCGGCGGGGA+GGG | - | chr5_2:18745631-18745650 | None:intergenic | 75.0% | |
| TGGGGAAAGGGGGAGCGGCG+GGG | - | chr5_2:18745635-18745654 | None:intergenic | 75.0% | |
| ! | GGAAAGGGGGAGCGGCGGGG+AGG | - | chr5_2:18745632-18745651 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 18741092 | 18747015 | 18741092 | ID=Msa0761430;Name=Msa0761430 |
| chr5_2 | mRNA | 18741092 | 18747015 | 18741092 | ID=Msa0761430-mRNA-1;Parent=Msa0761430;Name=Msa0761430-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0.13|0.06|1|1|1|16|0|674 |
| chr5_2 | exon | 18741092 | 18741195 | 18741092 | ID=Msa0761430-mRNA-1:exon:8080;Parent=Msa0761430-mRNA-1 |
| chr5_2 | exon | 18742760 | 18742826 | 18742760 | ID=Msa0761430-mRNA-1:exon:8081;Parent=Msa0761430-mRNA-1 |
| chr5_2 | exon | 18743169 | 18743290 | 18743169 | ID=Msa0761430-mRNA-1:exon:8082;Parent=Msa0761430-mRNA-1 |
| chr5_2 | exon | 18743397 | 18743432 | 18743397 | ID=Msa0761430-mRNA-1:exon:8083;Parent=Msa0761430-mRNA-1 |
| chr5_2 | exon | 18743560 | 18743679 | 18743560 | ID=Msa0761430-mRNA-1:exon:8084;Parent=Msa0761430-mRNA-1 |
| chr5_2 | exon | 18743797 | 18743916 | 18743797 | ID=Msa0761430-mRNA-1:exon:8085;Parent=Msa0761430-mRNA-1 |
| chr5_2 | exon | 18744035 | 18744170 | 18744035 | ID=Msa0761430-mRNA-1:exon:8086;Parent=Msa0761430-mRNA-1 |
| chr5_2 | exon | 18744318 | 18744494 | 18744318 | ID=Msa0761430-mRNA-1:exon:8087;Parent=Msa0761430-mRNA-1 |
| chr5_2 | exon | 18744659 | 18744814 | 18744659 | ID=Msa0761430-mRNA-1:exon:8088;Parent=Msa0761430-mRNA-1 |
| chr5_2 | exon | 18744913 | 18745019 | 18744913 | ID=Msa0761430-mRNA-1:exon:8089;Parent=Msa0761430-mRNA-1 |
| chr5_2 | exon | 18745111 | 18745195 | 18745111 | ID=Msa0761430-mRNA-1:exon:8090;Parent=Msa0761430-mRNA-1 |
| chr5_2 | exon | 18745281 | 18745422 | 18745281 | ID=Msa0761430-mRNA-1:exon:8091;Parent=Msa0761430-mRNA-1 |
| chr5_2 | exon | 18745773 | 18745932 | 18745773 | ID=Msa0761430-mRNA-1:exon:8092;Parent=Msa0761430-mRNA-1 |
| chr5_2 | exon | 18746133 | 18746249 | 18746133 | ID=Msa0761430-mRNA-1:exon:8093;Parent=Msa0761430-mRNA-1 |
| chr5_2 | exon | 18746330 | 18746453 | 18746330 | ID=Msa0761430-mRNA-1:exon:8094;Parent=Msa0761430-mRNA-1 |
| chr5_2 | exon | 18746764 | 18747015 | 18746764 | ID=Msa0761430-mRNA-1:exon:8095;Parent=Msa0761430-mRNA-1 |
| chr5_2 | CDS | 18741092 | 18741195 | 18741092 | ID=Msa0761430-mRNA-1:cds;Parent=Msa0761430-mRNA-1 |
| chr5_2 | CDS | 18742760 | 18742826 | 18742760 | ID=Msa0761430-mRNA-1:cds;Parent=Msa0761430-mRNA-1 |
| chr5_2 | CDS | 18743169 | 18743290 | 18743169 | ID=Msa0761430-mRNA-1:cds;Parent=Msa0761430-mRNA-1 |
| chr5_2 | CDS | 18743397 | 18743432 | 18743397 | ID=Msa0761430-mRNA-1:cds;Parent=Msa0761430-mRNA-1 |
| chr5_2 | CDS | 18743560 | 18743679 | 18743560 | ID=Msa0761430-mRNA-1:cds;Parent=Msa0761430-mRNA-1 |
| chr5_2 | CDS | 18743797 | 18743916 | 18743797 | ID=Msa0761430-mRNA-1:cds;Parent=Msa0761430-mRNA-1 |
| chr5_2 | CDS | 18744035 | 18744170 | 18744035 | ID=Msa0761430-mRNA-1:cds;Parent=Msa0761430-mRNA-1 |
| chr5_2 | CDS | 18744318 | 18744494 | 18744318 | ID=Msa0761430-mRNA-1:cds;Parent=Msa0761430-mRNA-1 |
| chr5_2 | CDS | 18744659 | 18744814 | 18744659 | ID=Msa0761430-mRNA-1:cds;Parent=Msa0761430-mRNA-1 |
| chr5_2 | CDS | 18744913 | 18745019 | 18744913 | ID=Msa0761430-mRNA-1:cds;Parent=Msa0761430-mRNA-1 |
| chr5_2 | CDS | 18745111 | 18745195 | 18745111 | ID=Msa0761430-mRNA-1:cds;Parent=Msa0761430-mRNA-1 |
| chr5_2 | CDS | 18745281 | 18745422 | 18745281 | ID=Msa0761430-mRNA-1:cds;Parent=Msa0761430-mRNA-1 |
| chr5_2 | CDS | 18745773 | 18745932 | 18745773 | ID=Msa0761430-mRNA-1:cds;Parent=Msa0761430-mRNA-1 |
| chr5_2 | CDS | 18746133 | 18746249 | 18746133 | ID=Msa0761430-mRNA-1:cds;Parent=Msa0761430-mRNA-1 |
| chr5_2 | CDS | 18746330 | 18746453 | 18746330 | ID=Msa0761430-mRNA-1:cds;Parent=Msa0761430-mRNA-1 |
| chr5_2 | CDS | 18746764 | 18747015 | 18746764 | ID=Msa0761430-mRNA-1:cds;Parent=Msa0761430-mRNA-1 |
| Gene Sequence |
| Protein sequence |
