Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0845150 | XP_003613660.1 | 98.214 | 168 | 3 | 0 | 1 | 168 | 1 | 168 | 8.31e-117 | 341 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0845150 | sp|Q8LDR3|CYP23_ARATH | 79.878 | 164 | 31 | 1 | 7 | 168 | 11 | 174 | 6.32e-96 | 281 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0845150 | B7FMU5 | 98.214 | 168 | 3 | 0 | 1 | 168 | 1 | 168 | 3.97e-117 | 341 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0174450 | Msa0845150 | 0.804041 | 2.613207e-49 | -8.615850e-47 |
| Msa0485240 | Msa0845150 | 0.805278 | 1.442272e-49 | -8.615850e-47 |
| Msa0845150 | Msa1418240 | 0.811169 | 8.006617e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0845150 | MtrunA17_Chr5g0416441 | 98.214 | 168 | 3 | 0 | 1 | 168 | 1 | 168 | 1.95e-120 | 341 |
| Msa0845150 | MtrunA17_Chr8g0351571 | 31.690 | 142 | 85 | 4 | 28 | 165 | 3 | 136 | 9.03e-13 | 63.5 |
| Msa0845150 | MtrunA17_Chr7g0266721 | 31.944 | 144 | 90 | 4 | 24 | 165 | 8 | 145 | 1.34e-12 | 63.2 |
| Msa0845150 | MtrunA17_Chr2g0321111 | 29.697 | 165 | 103 | 5 | 9 | 169 | 446 | 601 | 1.29e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0845150 | AT1G26940.1 | 79.878 | 164 | 31 | 1 | 7 | 168 | 11 | 174 | 6.43e-97 | 281 |
| Msa0845150 | AT1G26940.2 | 85.106 | 141 | 21 | 0 | 28 | 168 | 3 | 143 | 1.17e-89 | 261 |
| Msa0845150 | AT3G44600.1 | 32.192 | 146 | 87 | 4 | 28 | 169 | 478 | 615 | 1.06e-12 | 66.6 |
| Msa0845150 | AT2G36130.1 | 30.667 | 150 | 96 | 4 | 18 | 165 | 2 | 145 | 6.28e-12 | 61.6 |
| Msa0845150 | AT1G01940.1 | 31.690 | 142 | 85 | 4 | 28 | 165 | 3 | 136 | 7.46e-12 | 61.6 |
Find 50 sgRNAs with CRISPR-Local
Find 312 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCAACCCGTGTCGTCTTTC+AGG | 0.193928 | 5_4:-23970274 | Msa0845150:intron |
| TTAAATGAATTTACATTTCT+TGG | 0.194143 | 5_4:-23968029 | Msa0845150:CDS |
| TCTTCTTTGTTCCTCATTCA+TGG | 0.236324 | 5_4:+23968835 | None:intergenic |
| TAACACCAATCATTTCTTTC+GGG | 0.252702 | 5_4:-23969035 | Msa0845150:intron |
| ATGACAAATATTCCTCTTTA+CGG | 0.301519 | 5_4:+23968123 | None:intergenic |
| GAAAATGTGGTCAACTGTTT+TGG | 0.306456 | 5_4:+23969081 | None:intergenic |
| TCGTGAATGCAGACAAATTA+TGG | 0.318879 | 5_4:-23969139 | Msa0845150:intron |
| ATAACACCAATCATTTCTTT+CGG | 0.318939 | 5_4:-23969036 | Msa0845150:CDS |
| AATTATGGAGATATTGAGTT+TGG | 0.330974 | 5_4:-23969124 | Msa0845150:CDS |
| CCAACAAAAGAATGAATCTT+AGG | 0.339809 | 5_4:+23970337 | None:intergenic |
| AAAGAGGATCCACCACTATC+TGG | 0.341326 | 5_4:+23968329 | None:intergenic |
| GACACGGGTTGATCCCATTT+GGG | 0.346004 | 5_4:+23970284 | None:intergenic |
| CATTCGCAACATCTGCTACT+TGG | 0.346902 | 5_4:+23968870 | None:intergenic |
| CTTCTTTGTTCCTCATTCAT+GGG | 0.373755 | 5_4:+23968836 | None:intergenic |
| TTCAATGCTTAGGTAGATAA+GGG | 0.376717 | 5_4:-23968902 | Msa0845150:intron |
| GGAAATTCTCCTCATCTTGA+TGG | 0.385053 | 5_4:-23968293 | Msa0845150:CDS |
| CGACACGGGTTGATCCCATT+TGG | 0.393811 | 5_4:+23970283 | None:intergenic |
| TGACAAATATTCCTCTTTAC+GGG | 0.410544 | 5_4:+23968124 | None:intergenic |
| TTCAAGCTTGTGAGACTTGG+AGG | 0.430497 | 5_4:-23969061 | Msa0845150:CDS |
| ATTCAATGCTTAGGTAGATA+AGG | 0.434823 | 5_4:-23968903 | Msa0845150:intron |
| GAAGCTGAAAAGACAGTTGT+TGG | 0.436934 | 5_4:-23968812 | Msa0845150:CDS |
| ATTCGCAACATCTGCTACTT+GGG | 0.441969 | 5_4:+23968871 | None:intergenic |
| TAGCGATGTCAAACATGTCC+GGG | 0.481197 | 5_4:-23968783 | Msa0845150:CDS |
| TGTCCGGGGTATTCTTTCCA+TGG | 0.486863 | 5_4:-23968768 | Msa0845150:CDS |
| TTAGCGATGTCAAACATGTC+CGG | 0.487431 | 5_4:-23968784 | Msa0845150:CDS |
| TTCTCCTCATCTTGATGGAA+AGG | 0.495324 | 5_4:-23968288 | Msa0845150:intron |
| GTCTCACAAGCTTGAAAATG+TGG | 0.508296 | 5_4:+23969068 | None:intergenic |
| AATGACTGAACATTAAATGA+AGG | 0.509192 | 5_4:+23968054 | None:intergenic |
| GGGGTATTCTTTCCATGGGA+AGG | 0.525012 | 5_4:-23968763 | Msa0845150:intron |
| ACACGGGTTGATCCCATTTG+GGG | 0.531482 | 5_4:+23970285 | None:intergenic |
| ATATTTGGAAAAGTTACTAA+AGG | 0.532245 | 5_4:-23968182 | Msa0845150:CDS |
| GCAACTACCCACCCGTAAAG+AGG | 0.532412 | 5_4:-23968135 | Msa0845150:CDS |
| GTCCGGGGTATTCTTTCCAT+GGG | 0.540623 | 5_4:-23968767 | Msa0845150:CDS |
| CAAATATTCCTCTTTACGGG+TGG | 0.544692 | 5_4:+23968127 | None:intergenic |
| ATGACTGAACATTAAATGAA+GGG | 0.556632 | 5_4:+23968055 | None:intergenic |
| AGGCACGACGATCCAGATAG+TGG | 0.560872 | 5_4:-23968341 | Msa0845150:CDS |
| CAGTACCCGAAAGAAATGAT+TGG | 0.581364 | 5_4:+23969030 | None:intergenic |
| AAGATCTGCTCCCATGAATG+AGG | 0.588977 | 5_4:-23968846 | Msa0845150:CDS |
| AAATATTCCTCTTTACGGGT+GGG | 0.591696 | 5_4:+23968128 | None:intergenic |
| TGACTGAACATTAAATGAAG+GGG | 0.593242 | 5_4:+23968056 | None:intergenic |
| TAAGAAACCTAACCTTCCCA+TGG | 0.596016 | 5_4:+23968751 | None:intergenic |
| CAAGTAGCAGATGTTGCGAA+TGG | 0.600359 | 5_4:-23968869 | Msa0845150:CDS |
| CTCACCTTTCCATCAAGATG+AGG | 0.623174 | 5_4:+23968284 | None:intergenic |
| GTAAAGAGGAATATTTGTCA+TGG | 0.626446 | 5_4:-23968121 | Msa0845150:CDS |
| GACTGAACATTAAATGAAGG+GGG | 0.635190 | 5_4:+23968057 | None:intergenic |
| CACGACGATCCAGATAGTGG+TGG | 0.658792 | 5_4:-23968338 | Msa0845150:CDS |
| AGAAAACCTGAAAGACGACA+CGG | 0.659954 | 5_4:+23970268 | None:intergenic |
| GAAAACCTGAAAGACGACAC+GGG | 0.668948 | 5_4:+23970269 | None:intergenic |
| AGCGATGTCAAACATGTCCG+GGG | 0.691354 | 5_4:-23968782 | Msa0845150:CDS |
| TTCCCATGGAAAGAATACCC+CGG | 0.703104 | 5_4:+23968765 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GATATCGATAATTAAAAAAA+AGG | - | chr5_4:23968707-23968726 | Msa0845150:intron | 15.0% |
| !! | AACAATAAAATTGATATCAA+TGG | + | chr5_4:23968812-23968831 | None:intergenic | 15.0% |
| !!! | ATTGATATCAATTTTATTGT+TGG | - | chr5_4:23968811-23968830 | Msa0845150:CDS | 15.0% |
| !! | AATAAACAACTTATTTATGT+GGG | - | chr5_4:23968849-23968868 | Msa0845150:CDS | 15.0% |
| !! | TGATTATTTATAAAGTTGTT+TGG | - | chr5_4:23969391-23969410 | Msa0845150:intron | 15.0% |
| !! | TTAAATGAATTTACATTTCT+TGG | - | chr5_4:23970335-23970354 | Msa0845150:CDS | 15.0% |
| !! | GATATCGATAATTAAAAAAA+AGG | - | chr5_4:23968707-23968726 | Msa0845150:intron | 15.0% |
| !! | AACAATAAAATTGATATCAA+TGG | + | chr5_4:23968812-23968831 | None:intergenic | 15.0% |
| !!! | ATTGATATCAATTTTATTGT+TGG | - | chr5_4:23968811-23968830 | Msa0845150:CDS | 15.0% |
| !! | AATAAACAACTTATTTATGT+GGG | - | chr5_4:23968849-23968868 | Msa0845150:CDS | 15.0% |
| !! | TGATTATTTATAAAGTTGTT+TGG | - | chr5_4:23969391-23969410 | Msa0845150:intron | 15.0% |
| !! | TTAAATGAATTTACATTTCT+TGG | - | chr5_4:23970335-23970354 | Msa0845150:CDS | 15.0% |
| !!! | ATTTTCTGAATCAACAAAAT+GGG | + | chr5_4:23968251-23968270 | None:intergenic | 20.0% |
| !!! | AATTTTCTGAATCAACAAAA+TGG | + | chr5_4:23968252-23968271 | None:intergenic | 20.0% |
| !! | AGATCTTAGTTAGTTATATT+CGG | - | chr5_4:23968276-23968295 | Msa0845150:intron | 20.0% |
| !!! | AAGTTTGATATGGTTTTAAA+TGG | - | chr5_4:23968630-23968649 | Msa0845150:intron | 20.0% |
| !!! | AGTTTGATATGGTTTTAAAT+GGG | - | chr5_4:23968631-23968650 | Msa0845150:intron | 20.0% |
| !!! | ATCAATTTTATTGTTGGTTT+TGG | - | chr5_4:23968817-23968836 | Msa0845150:CDS | 20.0% |
| !! | GAATAAACAACTTATTTATG+TGG | - | chr5_4:23968848-23968867 | Msa0845150:CDS | 20.0% |
| !! | ACATATTAGTTAGATTGATT+AGG | - | chr5_4:23969014-23969033 | Msa0845150:intron | 20.0% |
| !! | ATATTTGGAAAAGTTACTAA+AGG | - | chr5_4:23970182-23970201 | Msa0845150:intron | 20.0% |
| !!! | ATTTTCTGAATCAACAAAAT+GGG | + | chr5_4:23968251-23968270 | None:intergenic | 20.0% |
| !!! | AATTTTCTGAATCAACAAAA+TGG | + | chr5_4:23968252-23968271 | None:intergenic | 20.0% |
| !! | AGATCTTAGTTAGTTATATT+CGG | - | chr5_4:23968276-23968295 | Msa0845150:intron | 20.0% |
| !!! | AAGTTTGATATGGTTTTAAA+TGG | - | chr5_4:23968630-23968649 | Msa0845150:intron | 20.0% |
| !!! | AGTTTGATATGGTTTTAAAT+GGG | - | chr5_4:23968631-23968650 | Msa0845150:intron | 20.0% |
| !!! | ATCAATTTTATTGTTGGTTT+TGG | - | chr5_4:23968817-23968836 | Msa0845150:CDS | 20.0% |
| !! | GAATAAACAACTTATTTATG+TGG | - | chr5_4:23968848-23968867 | Msa0845150:CDS | 20.0% |
| !! | ACATATTAGTTAGATTGATT+AGG | - | chr5_4:23969014-23969033 | Msa0845150:intron | 20.0% |
| !! | ATATTTGGAAAAGTTACTAA+AGG | - | chr5_4:23970182-23970201 | Msa0845150:intron | 20.0% |
| !! | TTTTCTGAATCAACAAAATG+GGG | + | chr5_4:23968250-23968269 | None:intergenic | 25.0% |
| ! | TGTTAGTACAAAGTTTGATA+TGG | - | chr5_4:23968620-23968639 | Msa0845150:intron | 25.0% |
| ! | TAAAAAAAAGGTAGCTCAAA+TGG | - | chr5_4:23968719-23968738 | Msa0845150:intron | 25.0% |
| !! | AAAAGTGTAGAAAAGTGAAA+TGG | + | chr5_4:23969119-23969138 | None:intergenic | 25.0% |
| !!! | GTTCATAAACATTTTTCAAC+TGG | + | chr5_4:23969183-23969202 | None:intergenic | 25.0% |
| ! | AATTATGGAGATATTGAGTT+TGG | - | chr5_4:23969240-23969259 | Msa0845150:intron | 25.0% |
| ! | ATAACACCAATCATTTCTTT+CGG | - | chr5_4:23969328-23969347 | Msa0845150:intron | 25.0% |
| !!! | TTTTGGTTAATTCAATGCTT+AGG | - | chr5_4:23969452-23969471 | Msa0845150:intron | 25.0% |
| !! | TCATCATTAAGTTGCATATA+TGG | - | chr5_4:23969710-23969729 | Msa0845150:intron | 25.0% |
| ! | ACTATAAACTCCAAACATTT+CGG | - | chr5_4:23970106-23970125 | Msa0845150:intron | 25.0% |
| !! | TGTTTTCAGTATGCAATATT+TGG | - | chr5_4:23970167-23970186 | Msa0845150:intron | 25.0% |
| ! | ATGACAAATATTCCTCTTTA+CGG | + | chr5_4:23970244-23970263 | None:intergenic | 25.0% |
| ! | ATGACTGAACATTAAATGAA+GGG | + | chr5_4:23970312-23970331 | None:intergenic | 25.0% |
| ! | AATGACTGAACATTAAATGA+AGG | + | chr5_4:23970313-23970332 | None:intergenic | 25.0% |
| !! | TTTTCTGAATCAACAAAATG+GGG | + | chr5_4:23968250-23968269 | None:intergenic | 25.0% |
| ! | TGTTAGTACAAAGTTTGATA+TGG | - | chr5_4:23968620-23968639 | Msa0845150:intron | 25.0% |
| ! | TAAAAAAAAGGTAGCTCAAA+TGG | - | chr5_4:23968719-23968738 | Msa0845150:intron | 25.0% |
| !! | AAAAGTGTAGAAAAGTGAAA+TGG | + | chr5_4:23969119-23969138 | None:intergenic | 25.0% |
| !!! | GTTCATAAACATTTTTCAAC+TGG | + | chr5_4:23969183-23969202 | None:intergenic | 25.0% |
| ! | AATTATGGAGATATTGAGTT+TGG | - | chr5_4:23969240-23969259 | Msa0845150:intron | 25.0% |
| ! | ATAACACCAATCATTTCTTT+CGG | - | chr5_4:23969328-23969347 | Msa0845150:intron | 25.0% |
| !!! | TTTTGGTTAATTCAATGCTT+AGG | - | chr5_4:23969452-23969471 | Msa0845150:intron | 25.0% |
| !! | TCATCATTAAGTTGCATATA+TGG | - | chr5_4:23969710-23969729 | Msa0845150:intron | 25.0% |
| ! | ACTATAAACTCCAAACATTT+CGG | - | chr5_4:23970106-23970125 | Msa0845150:intron | 25.0% |
| !! | TGTTTTCAGTATGCAATATT+TGG | - | chr5_4:23970167-23970186 | Msa0845150:intron | 25.0% |
| ! | ATGACAAATATTCCTCTTTA+CGG | + | chr5_4:23970244-23970263 | None:intergenic | 25.0% |
| ! | ATGACTGAACATTAAATGAA+GGG | + | chr5_4:23970312-23970331 | None:intergenic | 25.0% |
| ! | AATGACTGAACATTAAATGA+AGG | + | chr5_4:23970313-23970332 | None:intergenic | 25.0% |
| CCAACAAAAGAATGAATCTT+AGG | + | chr5_4:23968030-23968049 | None:intergenic | 30.0% | |
| ! | CCTAAGATTCATTCTTTTGT+TGG | - | chr5_4:23968027-23968046 | Msa0845150:CDS | 30.0% |
| CAAAAACTAACAGATAACCA+TGG | + | chr5_4:23968201-23968220 | None:intergenic | 30.0% | |
| TGATTGAAAAGCTCAAACTT+TGG | - | chr5_4:23968223-23968242 | Msa0845150:intron | 30.0% | |
| AATCAAGTAGTTCAATCAGT+GGG | - | chr5_4:23968315-23968334 | Msa0845150:CDS | 30.0% | |
| ! | TTAGTGCTAGTTAGTTTATG+TGG | - | chr5_4:23968397-23968416 | Msa0845150:intron | 30.0% |
| TCTGATACCATGTTGAAAAT+TGG | - | chr5_4:23968489-23968508 | Msa0845150:intron | 30.0% | |
| CTGATACCATGTTGAAAATT+GGG | - | chr5_4:23968490-23968509 | Msa0845150:intron | 30.0% | |
| TGATACCATGTTGAAAATTG+GGG | - | chr5_4:23968491-23968510 | Msa0845150:intron | 30.0% | |
| CTCACTCATCTTTATAAAAC+CGG | - | chr5_4:23968514-23968533 | Msa0845150:intron | 30.0% | |
| ! | AGAGTTCTATCTTTTCAATG+TGG | - | chr5_4:23968585-23968604 | Msa0845150:intron | 30.0% |
| ! | GAGTTCTATCTTTTCAATGT+GGG | - | chr5_4:23968586-23968605 | Msa0845150:intron | 30.0% |
| AATTATCGATATCTGACCTA+AGG | + | chr5_4:23968700-23968719 | None:intergenic | 30.0% | |
| CAAAATTTGCATAGCAAGAT+GGG | + | chr5_4:23968757-23968776 | None:intergenic | 30.0% | |
| ACATCGCAAATAGCTTATAT+AGG | + | chr5_4:23968983-23969002 | None:intergenic | 30.0% | |
| TAGTTAGATTGATTAGGAGT+TGG | - | chr5_4:23969020-23969039 | Msa0845150:intron | 30.0% | |
| TTACATCAAGTAGTACTTTG+AGG | + | chr5_4:23969068-23969087 | None:intergenic | 30.0% | |
| ! | AAAATGTGGTCAACTGTTTT+GGG | + | chr5_4:23969285-23969304 | None:intergenic | 30.0% |
| TAACACCAATCATTTCTTTC+GGG | - | chr5_4:23969329-23969348 | Msa0845150:intron | 30.0% | |
| ATTCAATGCTTAGGTAGATA+AGG | - | chr5_4:23969461-23969480 | Msa0845150:intron | 30.0% | |
| TTCAATGCTTAGGTAGATAA+GGG | - | chr5_4:23969462-23969481 | Msa0845150:intron | 30.0% | |
| ! | TTTCTTATGATGGTGATTGT+TGG | - | chr5_4:23969629-23969648 | Msa0845150:intron | 30.0% |
| CAAGAACTCGAAAAGAAATA+AGG | + | chr5_4:23969661-23969680 | None:intergenic | 30.0% | |
| !!! | CTTATTTCTTTTCGAGTTCT+TGG | - | chr5_4:23969659-23969678 | Msa0845150:intron | 30.0% |
| ATCAAAATTAAGCAACTAGC+AGG | + | chr5_4:23969810-23969829 | None:intergenic | 30.0% | |
| !! | TCTGAAACTATTTTCACCTT+TGG | - | chr5_4:23969955-23969974 | Msa0845150:intron | 30.0% |
| AAGAACAAACTGCATTCATT+AGG | + | chr5_4:23970001-23970020 | None:intergenic | 30.0% | |
| ! | TGAATGCAGTTTGTTCTTAT+AGG | - | chr5_4:23970003-23970022 | Msa0845150:intron | 30.0% |
| TGACAAATATTCCTCTTTAC+GGG | + | chr5_4:23970243-23970262 | None:intergenic | 30.0% | |
| GTAAAGAGGAATATTTGTCA+TGG | - | chr5_4:23970243-23970262 | Msa0845150:intron | 30.0% | |
| TGACTGAACATTAAATGAAG+GGG | + | chr5_4:23970311-23970330 | None:intergenic | 30.0% | |
| CCAACAAAAGAATGAATCTT+AGG | + | chr5_4:23968030-23968049 | None:intergenic | 30.0% | |
| ! | CCTAAGATTCATTCTTTTGT+TGG | - | chr5_4:23968027-23968046 | Msa0845150:CDS | 30.0% |
| CAAAAACTAACAGATAACCA+TGG | + | chr5_4:23968201-23968220 | None:intergenic | 30.0% | |
| TGATTGAAAAGCTCAAACTT+TGG | - | chr5_4:23968223-23968242 | Msa0845150:intron | 30.0% | |
| AATCAAGTAGTTCAATCAGT+GGG | - | chr5_4:23968315-23968334 | Msa0845150:CDS | 30.0% | |
| ! | TTAGTGCTAGTTAGTTTATG+TGG | - | chr5_4:23968397-23968416 | Msa0845150:intron | 30.0% |
| TCTGATACCATGTTGAAAAT+TGG | - | chr5_4:23968489-23968508 | Msa0845150:intron | 30.0% | |
| CTGATACCATGTTGAAAATT+GGG | - | chr5_4:23968490-23968509 | Msa0845150:intron | 30.0% | |
| TGATACCATGTTGAAAATTG+GGG | - | chr5_4:23968491-23968510 | Msa0845150:intron | 30.0% | |
| CTCACTCATCTTTATAAAAC+CGG | - | chr5_4:23968514-23968533 | Msa0845150:intron | 30.0% | |
| ! | AGAGTTCTATCTTTTCAATG+TGG | - | chr5_4:23968585-23968604 | Msa0845150:intron | 30.0% |
| ! | GAGTTCTATCTTTTCAATGT+GGG | - | chr5_4:23968586-23968605 | Msa0845150:intron | 30.0% |
| AATTATCGATATCTGACCTA+AGG | + | chr5_4:23968700-23968719 | None:intergenic | 30.0% | |
| CAAAATTTGCATAGCAAGAT+GGG | + | chr5_4:23968757-23968776 | None:intergenic | 30.0% | |
| ACATCGCAAATAGCTTATAT+AGG | + | chr5_4:23968983-23969002 | None:intergenic | 30.0% | |
| TAGTTAGATTGATTAGGAGT+TGG | - | chr5_4:23969020-23969039 | Msa0845150:intron | 30.0% | |
| TTACATCAAGTAGTACTTTG+AGG | + | chr5_4:23969068-23969087 | None:intergenic | 30.0% | |
| ! | AAAATGTGGTCAACTGTTTT+GGG | + | chr5_4:23969285-23969304 | None:intergenic | 30.0% |
| TAACACCAATCATTTCTTTC+GGG | - | chr5_4:23969329-23969348 | Msa0845150:intron | 30.0% | |
| ATTCAATGCTTAGGTAGATA+AGG | - | chr5_4:23969461-23969480 | Msa0845150:intron | 30.0% | |
| TTCAATGCTTAGGTAGATAA+GGG | - | chr5_4:23969462-23969481 | Msa0845150:intron | 30.0% | |
| ! | TTTCTTATGATGGTGATTGT+TGG | - | chr5_4:23969629-23969648 | Msa0845150:intron | 30.0% |
| CAAGAACTCGAAAAGAAATA+AGG | + | chr5_4:23969661-23969680 | None:intergenic | 30.0% | |
| !!! | CTTATTTCTTTTCGAGTTCT+TGG | - | chr5_4:23969659-23969678 | Msa0845150:intron | 30.0% |
| ATCAAAATTAAGCAACTAGC+AGG | + | chr5_4:23969810-23969829 | None:intergenic | 30.0% | |
| !! | TCTGAAACTATTTTCACCTT+TGG | - | chr5_4:23969955-23969974 | Msa0845150:intron | 30.0% |
| AAGAACAAACTGCATTCATT+AGG | + | chr5_4:23970001-23970020 | None:intergenic | 30.0% | |
| ! | TGAATGCAGTTTGTTCTTAT+AGG | - | chr5_4:23970003-23970022 | Msa0845150:intron | 30.0% |
| TGACAAATATTCCTCTTTAC+GGG | + | chr5_4:23970243-23970262 | None:intergenic | 30.0% | |
| GTAAAGAGGAATATTTGTCA+TGG | - | chr5_4:23970243-23970262 | Msa0845150:intron | 30.0% | |
| TGACTGAACATTAAATGAAG+GGG | + | chr5_4:23970311-23970330 | None:intergenic | 30.0% | |
| ! | TTCTTCTTTTGAACCCCAAA+TGG | - | chr5_4:23968066-23968085 | Msa0845150:CDS | 35.0% |
| ! | TCTTCTTTTGAACCCCAAAT+GGG | - | chr5_4:23968067-23968086 | Msa0845150:CDS | 35.0% |
| GAATCAAGTAGTTCAATCAG+TGG | - | chr5_4:23968314-23968333 | Msa0845150:CDS | 35.0% | |
| GTATCAGAGCATATCAATTC+GGG | + | chr5_4:23968477-23968496 | None:intergenic | 35.0% | |
| GGTATCAGAGCATATCAATT+CGG | + | chr5_4:23968478-23968497 | None:intergenic | 35.0% | |
| !! | CTTTATAAAACCGGCTTGTA+AGG | - | chr5_4:23968523-23968542 | Msa0845150:intron | 35.0% |
| GCAAAATTTGCATAGCAAGA+TGG | + | chr5_4:23968758-23968777 | None:intergenic | 35.0% | |
| ! | CTATGCAAATTTTGCTTGCT+TGG | - | chr5_4:23968763-23968782 | Msa0845150:intron | 35.0% |
| ! | TAGATTGATTAGGAGTTGGT+TGG | - | chr5_4:23969024-23969043 | Msa0845150:intron | 35.0% |
| TCGTGAATGCAGACAAATTA+TGG | - | chr5_4:23969225-23969244 | Msa0845150:intron | 35.0% | |
| ! | GAAAATGTGGTCAACTGTTT+TGG | + | chr5_4:23969286-23969305 | None:intergenic | 35.0% |
| !! | ATTTTCAAGCTTGTGAGACT+TGG | - | chr5_4:23969300-23969319 | Msa0845150:intron | 35.0% |
| CTTCTTTGTTCCTCATTCAT+GGG | + | chr5_4:23969531-23969550 | None:intergenic | 35.0% | |
| TCTTCTTTGTTCCTCATTCA+TGG | + | chr5_4:23969532-23969551 | None:intergenic | 35.0% | |
| GAAGGTTAGGTTTCTTATGA+TGG | - | chr5_4:23969619-23969638 | Msa0845150:intron | 35.0% | |
| !!! | ATCCTCTTTTTCAATGTTGC+TGG | - | chr5_4:23970049-23970068 | Msa0845150:intron | 35.0% |
| !!! | TCCTCTTTTTCAATGTTGCT+GGG | - | chr5_4:23970050-23970069 | Msa0845150:intron | 35.0% |
| ATAAACTCCAAACATTTCGG+AGG | - | chr5_4:23970109-23970128 | Msa0845150:intron | 35.0% | |
| ATAGAATCCTCCGAAATGTT+TGG | + | chr5_4:23970119-23970138 | None:intergenic | 35.0% | |
| AAATATTCCTCTTTACGGGT+GGG | + | chr5_4:23970239-23970258 | None:intergenic | 35.0% | |
| ACATTAAATGAAGGGGGAAA+AGG | + | chr5_4:23970304-23970323 | None:intergenic | 35.0% | |
| GACTGAACATTAAATGAAGG+GGG | + | chr5_4:23970310-23970329 | None:intergenic | 35.0% | |
| ! | TTCTTCTTTTGAACCCCAAA+TGG | - | chr5_4:23968066-23968085 | Msa0845150:CDS | 35.0% |
| ! | TCTTCTTTTGAACCCCAAAT+GGG | - | chr5_4:23968067-23968086 | Msa0845150:CDS | 35.0% |
| GAATCAAGTAGTTCAATCAG+TGG | - | chr5_4:23968314-23968333 | Msa0845150:CDS | 35.0% | |
| GTATCAGAGCATATCAATTC+GGG | + | chr5_4:23968477-23968496 | None:intergenic | 35.0% | |
| GGTATCAGAGCATATCAATT+CGG | + | chr5_4:23968478-23968497 | None:intergenic | 35.0% | |
| !! | CTTTATAAAACCGGCTTGTA+AGG | - | chr5_4:23968523-23968542 | Msa0845150:intron | 35.0% |
| GCAAAATTTGCATAGCAAGA+TGG | + | chr5_4:23968758-23968777 | None:intergenic | 35.0% | |
| ! | CTATGCAAATTTTGCTTGCT+TGG | - | chr5_4:23968763-23968782 | Msa0845150:intron | 35.0% |
| ! | TAGATTGATTAGGAGTTGGT+TGG | - | chr5_4:23969024-23969043 | Msa0845150:intron | 35.0% |
| TCGTGAATGCAGACAAATTA+TGG | - | chr5_4:23969225-23969244 | Msa0845150:intron | 35.0% | |
| ! | GAAAATGTGGTCAACTGTTT+TGG | + | chr5_4:23969286-23969305 | None:intergenic | 35.0% |
| !! | ATTTTCAAGCTTGTGAGACT+TGG | - | chr5_4:23969300-23969319 | Msa0845150:intron | 35.0% |
| CTTCTTTGTTCCTCATTCAT+GGG | + | chr5_4:23969531-23969550 | None:intergenic | 35.0% | |
| TCTTCTTTGTTCCTCATTCA+TGG | + | chr5_4:23969532-23969551 | None:intergenic | 35.0% | |
| GAAGGTTAGGTTTCTTATGA+TGG | - | chr5_4:23969619-23969638 | Msa0845150:intron | 35.0% | |
| !!! | ATCCTCTTTTTCAATGTTGC+TGG | - | chr5_4:23970049-23970068 | Msa0845150:intron | 35.0% |
| !!! | TCCTCTTTTTCAATGTTGCT+GGG | - | chr5_4:23970050-23970069 | Msa0845150:intron | 35.0% |
| ATAAACTCCAAACATTTCGG+AGG | - | chr5_4:23970109-23970128 | Msa0845150:intron | 35.0% | |
| ATAGAATCCTCCGAAATGTT+TGG | + | chr5_4:23970119-23970138 | None:intergenic | 35.0% | |
| AAATATTCCTCTTTACGGGT+GGG | + | chr5_4:23970239-23970258 | None:intergenic | 35.0% | |
| ACATTAAATGAAGGGGGAAA+AGG | + | chr5_4:23970304-23970323 | None:intergenic | 35.0% | |
| GACTGAACATTAAATGAAGG+GGG | + | chr5_4:23970310-23970329 | None:intergenic | 35.0% | |
| AGAAAACCTGAAAGACGACA+CGG | + | chr5_4:23968099-23968118 | None:intergenic | 40.0% | |
| GATTGATCCTCGAGATTAGT+CGG | - | chr5_4:23968673-23968692 | Msa0845150:intron | 40.0% | |
| !! | TAGGAGTTGGTTGGTCTAAT+TGG | - | chr5_4:23969033-23969052 | Msa0845150:intron | 40.0% |
| GTCTCACAAGCTTGAAAATG+TGG | + | chr5_4:23969299-23969318 | None:intergenic | 40.0% | |
| CAGTACCCGAAAGAAATGAT+TGG | + | chr5_4:23969337-23969356 | None:intergenic | 40.0% | |
| ! | GCAGTGAAAGTGAATGGTTT+TGG | - | chr5_4:23969435-23969454 | Msa0845150:intron | 40.0% |
| ! | ATTCGCAACATCTGCTACTT+GGG | + | chr5_4:23969496-23969515 | None:intergenic | 40.0% |
| GAAGCTGAAAAGACAGTTGT+TGG | - | chr5_4:23969552-23969571 | Msa0845150:intron | 40.0% | |
| TTAGCGATGTCAAACATGTC+CGG | - | chr5_4:23969580-23969599 | Msa0845150:intron | 40.0% | |
| ATTCTTTCCATGGGAAGGTT+AGG | - | chr5_4:23969606-23969625 | Msa0845150:intron | 40.0% | |
| TAAGAAACCTAACCTTCCCA+TGG | + | chr5_4:23969616-23969635 | None:intergenic | 40.0% | |
| CCAACAATTGCTCAAACCAA+AGG | + | chr5_4:23969974-23969993 | None:intergenic | 40.0% | |
| !! | CCTTTGGTTTGAGCAATTGT+TGG | - | chr5_4:23969971-23969990 | Msa0845150:intron | 40.0% |
| TCCCAGCAACATTGAAAAAG+AGG | + | chr5_4:23970054-23970073 | None:intergenic | 40.0% | |
| GGAAATTCTCCTCATCTTGA+TGG | - | chr5_4:23970071-23970090 | Msa0845150:intron | 40.0% | |
| TTCTCCTCATCTTGATGGAA+AGG | - | chr5_4:23970076-23970095 | Msa0845150:intron | 40.0% | |
| CAAATATTCCTCTTTACGGG+TGG | + | chr5_4:23970240-23970259 | None:intergenic | 40.0% | |
| AGAAAACCTGAAAGACGACA+CGG | + | chr5_4:23968099-23968118 | None:intergenic | 40.0% | |
| GATTGATCCTCGAGATTAGT+CGG | - | chr5_4:23968673-23968692 | Msa0845150:intron | 40.0% | |
| !! | TAGGAGTTGGTTGGTCTAAT+TGG | - | chr5_4:23969033-23969052 | Msa0845150:intron | 40.0% |
| GTCTCACAAGCTTGAAAATG+TGG | + | chr5_4:23969299-23969318 | None:intergenic | 40.0% | |
| CAGTACCCGAAAGAAATGAT+TGG | + | chr5_4:23969337-23969356 | None:intergenic | 40.0% | |
| ! | GCAGTGAAAGTGAATGGTTT+TGG | - | chr5_4:23969435-23969454 | Msa0845150:intron | 40.0% |
| ! | ATTCGCAACATCTGCTACTT+GGG | + | chr5_4:23969496-23969515 | None:intergenic | 40.0% |
| GAAGCTGAAAAGACAGTTGT+TGG | - | chr5_4:23969552-23969571 | Msa0845150:intron | 40.0% | |
| TTAGCGATGTCAAACATGTC+CGG | - | chr5_4:23969580-23969599 | Msa0845150:intron | 40.0% | |
| ATTCTTTCCATGGGAAGGTT+AGG | - | chr5_4:23969606-23969625 | Msa0845150:intron | 40.0% | |
| TAAGAAACCTAACCTTCCCA+TGG | + | chr5_4:23969616-23969635 | None:intergenic | 40.0% | |
| CCAACAATTGCTCAAACCAA+AGG | + | chr5_4:23969974-23969993 | None:intergenic | 40.0% | |
| !! | CCTTTGGTTTGAGCAATTGT+TGG | - | chr5_4:23969971-23969990 | Msa0845150:intron | 40.0% |
| TCCCAGCAACATTGAAAAAG+AGG | + | chr5_4:23970054-23970073 | None:intergenic | 40.0% | |
| GGAAATTCTCCTCATCTTGA+TGG | - | chr5_4:23970071-23970090 | Msa0845150:intron | 40.0% | |
| TTCTCCTCATCTTGATGGAA+AGG | - | chr5_4:23970076-23970095 | Msa0845150:intron | 40.0% | |
| CAAATATTCCTCTTTACGGG+TGG | + | chr5_4:23970240-23970259 | None:intergenic | 40.0% | |
| GAAAACCTGAAAGACGACAC+GGG | + | chr5_4:23968098-23968117 | None:intergenic | 45.0% | |
| ! | ATCCATTTCGAGTGCTTCCA+TGG | - | chr5_4:23968181-23968200 | Msa0845150:CDS | 45.0% |
| !! | AACCATGGAAGCACTCGAAA+TGG | + | chr5_4:23968186-23968205 | None:intergenic | 45.0% |
| !! | TAGTTCAATCAGTGGGCTGA+TGG | - | chr5_4:23968322-23968341 | Msa0845150:CDS | 45.0% |
| CAATAATGTAGGGCATGAGG+GGG | + | chr5_4:23968428-23968447 | None:intergenic | 45.0% | |
| CCAATAATGTAGGGCATGAG+GGG | + | chr5_4:23968429-23968448 | None:intergenic | 45.0% | |
| CCCAATAATGTAGGGCATGA+GGG | + | chr5_4:23968430-23968449 | None:intergenic | 45.0% | |
| CCCTCATGCCCTACATTATT+GGG | - | chr5_4:23968427-23968446 | Msa0845150:intron | 45.0% | |
| ATGCCCTACATTATTGGGCA+TGG | - | chr5_4:23968432-23968451 | Msa0845150:intron | 45.0% | |
| GCACCATGCCCAATAATGTA+GGG | + | chr5_4:23968438-23968457 | None:intergenic | 45.0% | |
| ! | GTGAGCCCCAATTTTCAACA+TGG | + | chr5_4:23968499-23968518 | None:intergenic | 45.0% |
| TTAATCCTCGCCTTACAAGC+CGG | + | chr5_4:23968536-23968555 | None:intergenic | 45.0% | |
| !! | ACTGTTTTGGGTGCAACAGT+TGG | + | chr5_4:23969273-23969292 | None:intergenic | 45.0% |
| TTCAAGCTTGTGAGACTTGG+AGG | - | chr5_4:23969303-23969322 | Msa0845150:intron | 45.0% | |
| GCTGTTGCAGTGAAAGTGAA+TGG | - | chr5_4:23969429-23969448 | Msa0845150:intron | 45.0% | |
| CATTCGCAACATCTGCTACT+TGG | + | chr5_4:23969497-23969516 | None:intergenic | 45.0% | |
| CAAGTAGCAGATGTTGCGAA+TGG | - | chr5_4:23969495-23969514 | Msa0845150:intron | 45.0% | |
| AAGATCTGCTCCCATGAATG+AGG | - | chr5_4:23969518-23969537 | Msa0845150:intron | 45.0% | |
| TAGCGATGTCAAACATGTCC+GGG | - | chr5_4:23969581-23969600 | Msa0845150:intron | 45.0% | |
| TTCCCATGGAAAGAATACCC+CGG | + | chr5_4:23969602-23969621 | None:intergenic | 45.0% | |
| AAAGAGGATCCACCACTATC+TGG | + | chr5_4:23970038-23970057 | None:intergenic | 45.0% | |
| CTCACCTTTCCATCAAGATG+AGG | + | chr5_4:23970083-23970102 | None:intergenic | 45.0% | |
| CTCATCTTGATGGAAAGGTG+AGG | - | chr5_4:23970081-23970100 | Msa0845150:intron | 45.0% | |
| GAAAACCTGAAAGACGACAC+GGG | + | chr5_4:23968098-23968117 | None:intergenic | 45.0% | |
| ! | ATCCATTTCGAGTGCTTCCA+TGG | - | chr5_4:23968181-23968200 | Msa0845150:CDS | 45.0% |
| !! | AACCATGGAAGCACTCGAAA+TGG | + | chr5_4:23968186-23968205 | None:intergenic | 45.0% |
| !! | TAGTTCAATCAGTGGGCTGA+TGG | - | chr5_4:23968322-23968341 | Msa0845150:CDS | 45.0% |
| CAATAATGTAGGGCATGAGG+GGG | + | chr5_4:23968428-23968447 | None:intergenic | 45.0% | |
| CCAATAATGTAGGGCATGAG+GGG | + | chr5_4:23968429-23968448 | None:intergenic | 45.0% | |
| CCCAATAATGTAGGGCATGA+GGG | + | chr5_4:23968430-23968449 | None:intergenic | 45.0% | |
| CCCTCATGCCCTACATTATT+GGG | - | chr5_4:23968427-23968446 | Msa0845150:intron | 45.0% | |
| ATGCCCTACATTATTGGGCA+TGG | - | chr5_4:23968432-23968451 | Msa0845150:intron | 45.0% | |
| GCACCATGCCCAATAATGTA+GGG | + | chr5_4:23968438-23968457 | None:intergenic | 45.0% | |
| ! | GTGAGCCCCAATTTTCAACA+TGG | + | chr5_4:23968499-23968518 | None:intergenic | 45.0% |
| TTAATCCTCGCCTTACAAGC+CGG | + | chr5_4:23968536-23968555 | None:intergenic | 45.0% | |
| !! | ACTGTTTTGGGTGCAACAGT+TGG | + | chr5_4:23969273-23969292 | None:intergenic | 45.0% |
| TTCAAGCTTGTGAGACTTGG+AGG | - | chr5_4:23969303-23969322 | Msa0845150:intron | 45.0% | |
| GCTGTTGCAGTGAAAGTGAA+TGG | - | chr5_4:23969429-23969448 | Msa0845150:intron | 45.0% | |
| CATTCGCAACATCTGCTACT+TGG | + | chr5_4:23969497-23969516 | None:intergenic | 45.0% | |
| CAAGTAGCAGATGTTGCGAA+TGG | - | chr5_4:23969495-23969514 | Msa0845150:intron | 45.0% | |
| AAGATCTGCTCCCATGAATG+AGG | - | chr5_4:23969518-23969537 | Msa0845150:intron | 45.0% | |
| TAGCGATGTCAAACATGTCC+GGG | - | chr5_4:23969581-23969600 | Msa0845150:intron | 45.0% | |
| TTCCCATGGAAAGAATACCC+CGG | + | chr5_4:23969602-23969621 | None:intergenic | 45.0% | |
| AAAGAGGATCCACCACTATC+TGG | + | chr5_4:23970038-23970057 | None:intergenic | 45.0% | |
| CTCACCTTTCCATCAAGATG+AGG | + | chr5_4:23970083-23970102 | None:intergenic | 45.0% | |
| CTCATCTTGATGGAAAGGTG+AGG | - | chr5_4:23970081-23970100 | Msa0845150:intron | 45.0% | |
| !! | ACACGGGTTGATCCCATTTG+GGG | + | chr5_4:23968082-23968101 | None:intergenic | 50.0% |
| !! | GACACGGGTTGATCCCATTT+GGG | + | chr5_4:23968083-23968102 | None:intergenic | 50.0% |
| ATCAACCCGTGTCGTCTTTC+AGG | - | chr5_4:23968090-23968109 | Msa0845150:CDS | 50.0% | |
| !! | AATCAGTGGGCTGATGGTGT+AGG | - | chr5_4:23968328-23968347 | Msa0845150:CDS | 50.0% |
| CCCCTCATGCCCTACATTAT+TGG | - | chr5_4:23968426-23968445 | Msa0845150:intron | 50.0% | |
| GCCCAATAATGTAGGGCATG+AGG | + | chr5_4:23968431-23968450 | None:intergenic | 50.0% | |
| CGCACCATGCCCAATAATGT+AGG | + | chr5_4:23968439-23968458 | None:intergenic | 50.0% | |
| ACATTATTGGGCATGGTGCG+TGG | - | chr5_4:23968439-23968458 | Msa0845150:intron | 50.0% | |
| !! | TAAAACCGGCTTGTAAGGCG+AGG | - | chr5_4:23968528-23968547 | Msa0845150:intron | 50.0% |
| GGCTTGTAAGGCGAGGATTA+AGG | - | chr5_4:23968535-23968554 | Msa0845150:intron | 50.0% | |
| ! | TTTTAAATGGGCCCCGCTAG+TGG | - | chr5_4:23968643-23968662 | Msa0845150:intron | 50.0% |
| CTAAGGACCGACTAATCTCG+AGG | + | chr5_4:23968683-23968702 | None:intergenic | 50.0% | |
| ! | CTCGAGATTAGTCGGTCCTT+AGG | - | chr5_4:23968681-23968700 | Msa0845150:intron | 50.0% |
| AGCGATGTCAAACATGTCCG+GGG | - | chr5_4:23969582-23969601 | Msa0845150:intron | 50.0% | |
| ! | TGTCCGGGGTATTCTTTCCA+TGG | - | chr5_4:23969596-23969615 | Msa0845150:intron | 50.0% |
| ! | GTCCGGGGTATTCTTTCCAT+GGG | - | chr5_4:23969597-23969616 | Msa0845150:intron | 50.0% |
| ! | GGGGTATTCTTTCCATGGGA+AGG | - | chr5_4:23969601-23969620 | Msa0845150:intron | 50.0% |
| !! | ACACGGGTTGATCCCATTTG+GGG | + | chr5_4:23968082-23968101 | None:intergenic | 50.0% |
| !! | GACACGGGTTGATCCCATTT+GGG | + | chr5_4:23968083-23968102 | None:intergenic | 50.0% |
| ATCAACCCGTGTCGTCTTTC+AGG | - | chr5_4:23968090-23968109 | Msa0845150:CDS | 50.0% | |
| !! | AATCAGTGGGCTGATGGTGT+AGG | - | chr5_4:23968328-23968347 | Msa0845150:CDS | 50.0% |
| CCCCTCATGCCCTACATTAT+TGG | - | chr5_4:23968426-23968445 | Msa0845150:intron | 50.0% | |
| GCCCAATAATGTAGGGCATG+AGG | + | chr5_4:23968431-23968450 | None:intergenic | 50.0% | |
| CGCACCATGCCCAATAATGT+AGG | + | chr5_4:23968439-23968458 | None:intergenic | 50.0% | |
| ACATTATTGGGCATGGTGCG+TGG | - | chr5_4:23968439-23968458 | Msa0845150:intron | 50.0% | |
| !! | TAAAACCGGCTTGTAAGGCG+AGG | - | chr5_4:23968528-23968547 | Msa0845150:intron | 50.0% |
| GGCTTGTAAGGCGAGGATTA+AGG | - | chr5_4:23968535-23968554 | Msa0845150:intron | 50.0% | |
| ! | TTTTAAATGGGCCCCGCTAG+TGG | - | chr5_4:23968643-23968662 | Msa0845150:intron | 50.0% |
| CTAAGGACCGACTAATCTCG+AGG | + | chr5_4:23968683-23968702 | None:intergenic | 50.0% | |
| ! | CTCGAGATTAGTCGGTCCTT+AGG | - | chr5_4:23968681-23968700 | Msa0845150:intron | 50.0% |
| AGCGATGTCAAACATGTCCG+GGG | - | chr5_4:23969582-23969601 | Msa0845150:intron | 50.0% | |
| ! | TGTCCGGGGTATTCTTTCCA+TGG | - | chr5_4:23969596-23969615 | Msa0845150:intron | 50.0% |
| ! | GTCCGGGGTATTCTTTCCAT+GGG | - | chr5_4:23969597-23969616 | Msa0845150:intron | 50.0% |
| ! | GGGGTATTCTTTCCATGGGA+AGG | - | chr5_4:23969601-23969620 | Msa0845150:intron | 50.0% |
| !! | CGACACGGGTTGATCCCATT+TGG | + | chr5_4:23968084-23968103 | None:intergenic | 55.0% |
| ! | CTTGCGAGGAGCACACTTCA+AGG | + | chr5_4:23968360-23968379 | None:intergenic | 55.0% |
| CTTGAAGTGTGCTCCTCGCA+AGG | - | chr5_4:23968358-23968377 | Msa0845150:intron | 55.0% | |
| ATTGGGCATGGTGCGTGGAT+AGG | - | chr5_4:23968444-23968463 | Msa0845150:intron | 55.0% | |
| TCAATCCCACCGTCCACTAG+CGG | + | chr5_4:23968659-23968678 | None:intergenic | 55.0% | |
| AGGCACGACGATCCAGATAG+TGG | - | chr5_4:23970023-23970042 | Msa0845150:intron | 55.0% | |
| ! | CACGACGATCCAGATAGTGG+TGG | - | chr5_4:23970026-23970045 | Msa0845150:intron | 55.0% |
| GCAACTACCCACCCGTAAAG+AGG | - | chr5_4:23970229-23970248 | Msa0845150:intron | 55.0% | |
| !! | CGACACGGGTTGATCCCATT+TGG | + | chr5_4:23968084-23968103 | None:intergenic | 55.0% |
| ! | CTTGCGAGGAGCACACTTCA+AGG | + | chr5_4:23968360-23968379 | None:intergenic | 55.0% |
| CTTGAAGTGTGCTCCTCGCA+AGG | - | chr5_4:23968358-23968377 | Msa0845150:intron | 55.0% | |
| ATTGGGCATGGTGCGTGGAT+AGG | - | chr5_4:23968444-23968463 | Msa0845150:intron | 55.0% | |
| TCAATCCCACCGTCCACTAG+CGG | + | chr5_4:23968659-23968678 | None:intergenic | 55.0% | |
| AGGCACGACGATCCAGATAG+TGG | - | chr5_4:23970023-23970042 | Msa0845150:intron | 55.0% | |
| ! | CACGACGATCCAGATAGTGG+TGG | - | chr5_4:23970026-23970045 | Msa0845150:intron | 55.0% |
| GCAACTACCCACCCGTAAAG+AGG | - | chr5_4:23970229-23970248 | Msa0845150:intron | 55.0% | |
| TGTGCTCCTCGCAAGGTCTC+AGG | - | chr5_4:23968365-23968384 | Msa0845150:intron | 60.0% | |
| GTGCTCCTCGCAAGGTCTCA+GGG | - | chr5_4:23968366-23968385 | Msa0845150:intron | 60.0% | |
| TCGAACCCTGAGACCTTGCG+AGG | + | chr5_4:23968374-23968393 | None:intergenic | 60.0% | |
| GGCATGGTGCGTGGATAGGT+AGG | - | chr5_4:23968448-23968467 | Msa0845150:intron | 60.0% | |
| AAATGGGCCCCGCTAGTGGA+CGG | - | chr5_4:23968647-23968666 | Msa0845150:intron | 60.0% | |
| AATCCCACCGTCCACTAGCG+GGG | + | chr5_4:23968657-23968676 | None:intergenic | 60.0% | |
| CAATCCCACCGTCCACTAGC+GGG | + | chr5_4:23968658-23968677 | None:intergenic | 60.0% | |
| TGTGCTCCTCGCAAGGTCTC+AGG | - | chr5_4:23968365-23968384 | Msa0845150:intron | 60.0% | |
| GTGCTCCTCGCAAGGTCTCA+GGG | - | chr5_4:23968366-23968385 | Msa0845150:intron | 60.0% | |
| TCGAACCCTGAGACCTTGCG+AGG | + | chr5_4:23968374-23968393 | None:intergenic | 60.0% | |
| GGCATGGTGCGTGGATAGGT+AGG | - | chr5_4:23968448-23968467 | Msa0845150:intron | 60.0% | |
| AAATGGGCCCCGCTAGTGGA+CGG | - | chr5_4:23968647-23968666 | Msa0845150:intron | 60.0% | |
| AATCCCACCGTCCACTAGCG+GGG | + | chr5_4:23968657-23968676 | None:intergenic | 60.0% | |
| CAATCCCACCGTCCACTAGC+GGG | + | chr5_4:23968658-23968677 | None:intergenic | 60.0% | |
| ! | TGGGCCCCGCTAGTGGACGG+TGG | - | chr5_4:23968650-23968669 | Msa0845150:intron | 75.0% |
| ! | GGGCCCCGCTAGTGGACGGT+GGG | - | chr5_4:23968651-23968670 | Msa0845150:intron | 75.0% |
| ! | TGGGCCCCGCTAGTGGACGG+TGG | - | chr5_4:23968650-23968669 | Msa0845150:intron | 75.0% |
| ! | GGGCCCCGCTAGTGGACGGT+GGG | - | chr5_4:23968651-23968670 | Msa0845150:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 23968019 | 23970367 | 23968019 | ID=Msa0845150;Name=Msa0845150 |
| chr5_4 | mRNA | 23968019 | 23970367 | 23968019 | ID=Msa0845150-mRNA-1;Parent=Msa0845150;Name=Msa0845150-mRNA-1;_AED=0.24;_eAED=0.24;_QI=0|0|0|1|1|1|5|0|206 |
| chr5_4 | exon | 23970275 | 23970367 | 23970275 | ID=Msa0845150-mRNA-1:exon:9765;Parent=Msa0845150-mRNA-1 |
| chr5_4 | exon | 23969036 | 23969149 | 23969036 | ID=Msa0845150-mRNA-1:exon:9764;Parent=Msa0845150-mRNA-1 |
| chr5_4 | exon | 23968764 | 23968912 | 23968764 | ID=Msa0845150-mRNA-1:exon:9763;Parent=Msa0845150-mRNA-1 |
| chr5_4 | exon | 23968289 | 23968361 | 23968289 | ID=Msa0845150-mRNA-1:exon:9762;Parent=Msa0845150-mRNA-1 |
| chr5_4 | exon | 23968019 | 23968210 | 23968019 | ID=Msa0845150-mRNA-1:exon:9761;Parent=Msa0845150-mRNA-1 |
| chr5_4 | CDS | 23970275 | 23970367 | 23970275 | ID=Msa0845150-mRNA-1:cds;Parent=Msa0845150-mRNA-1 |
| chr5_4 | CDS | 23969036 | 23969149 | 23969036 | ID=Msa0845150-mRNA-1:cds;Parent=Msa0845150-mRNA-1 |
| chr5_4 | CDS | 23968764 | 23968912 | 23968764 | ID=Msa0845150-mRNA-1:cds;Parent=Msa0845150-mRNA-1 |
| chr5_4 | CDS | 23968289 | 23968361 | 23968289 | ID=Msa0845150-mRNA-1:cds;Parent=Msa0845150-mRNA-1 |
| chr5_4 | CDS | 23968019 | 23968210 | 23968019 | ID=Msa0845150-mRNA-1:cds;Parent=Msa0845150-mRNA-1 |
| Gene Sequence |
| Protein sequence |
