Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0846530 | XP_024639127.1 | 98.802 | 501 | 5 | 1 | 1 | 501 | 5 | 504 | 0.0 | 1021 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0846530 | A0A072UPS9 | 98.802 | 501 | 5 | 1 | 1 | 501 | 5 | 504 | 0.0 | 1021 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0389880 | Msa0846530 | 0.844544 | 7.081329e-59 | -8.615850e-47 |
| Msa0846530 | Msa1349550 | 0.810871 | 9.292097e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0846530 | MtrunA17_Chr5g0418171 | 98.802 | 501 | 5 | 1 | 1 | 501 | 5 | 504 | 0.0 | 1021 |
| Msa0846530 | MtrunA17_Chr7g0218061 | 50.725 | 552 | 204 | 8 | 14 | 499 | 1 | 550 | 0.0 | 534 |
| Msa0846530 | MtrunA17_Chr5g0415321 | 43.778 | 450 | 206 | 8 | 85 | 492 | 38 | 482 | 3.90e-112 | 340 |
| Msa0846530 | MtrunA17_Chr6g0452251 | 39.655 | 406 | 241 | 2 | 87 | 492 | 37 | 438 | 1.76e-98 | 304 |
| Msa0846530 | MtrunA17_Chr4g0065381 | 26.122 | 245 | 138 | 10 | 244 | 484 | 468 | 673 | 9.42e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0846530 | AT1G13970.1 | 54.753 | 526 | 171 | 11 | 14 | 497 | 1 | 501 | 0.0 | 526 |
| Msa0846530 | AT3G29180.3 | 53.463 | 462 | 143 | 6 | 107 | 500 | 51 | 508 | 1.28e-166 | 481 |
| Msa0846530 | AT3G29180.1 | 53.463 | 462 | 143 | 6 | 107 | 500 | 51 | 508 | 1.28e-166 | 481 |
| Msa0846530 | AT3G29180.2 | 53.463 | 462 | 143 | 6 | 107 | 500 | 51 | 508 | 1.28e-166 | 481 |
| Msa0846530 | AT5G39430.1 | 51.134 | 485 | 162 | 7 | 85 | 500 | 27 | 505 | 9.43e-155 | 451 |
| Msa0846530 | AT1G59650.1 | 44.213 | 432 | 188 | 7 | 111 | 492 | 57 | 485 | 1.39e-118 | 357 |
| Msa0846530 | AT1G10410.1 | 51.877 | 293 | 141 | 0 | 200 | 492 | 188 | 480 | 1.61e-106 | 326 |
Find 128 sgRNAs with CRISPR-Local
Find 254 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACTGGAGTAACTGGGTATT+TGG | 0.136527 | 5_4:-26724422 | None:intergenic |
| TCCTCAACACCAATTCTTTA+AGG | 0.142848 | 5_4:+26726116 | Msa0846530:CDS |
| TAGAGAAAGACTCAAAATTT+TGG | 0.181148 | 5_4:+26726005 | Msa0846530:CDS |
| TAATATTACACAACACAATT+TGG | 0.218679 | 5_4:-26727589 | None:intergenic |
| AACTTTCATACTGGAGTAAC+TGG | 0.240183 | 5_4:-26724430 | None:intergenic |
| GGAAAGGAAGGAAAGATTTC+TGG | 0.263361 | 5_4:+26727389 | Msa0846530:three_prime_UTR |
| TCATCCTGCTTTGTAGATTC+AGG | 0.266123 | 5_4:+26724452 | Msa0846530:CDS |
| CATTGGTATCTATTTGACTA+TGG | 0.304264 | 5_4:-26723511 | None:intergenic |
| CTCCATTCTTATCTATCTTA+AGG | 0.319291 | 5_4:-26724505 | None:intergenic |
| GATGAGATGGAAAAGGTTAA+AGG | 0.325650 | 5_4:+26725955 | Msa0846530:CDS |
| TAGTTGATCAATGGGGAAAA+TGG | 0.333557 | 5_4:+26727363 | Msa0846530:three_prime_UTR |
| TGACCCTTGCTCTTCCCATT+TGG | 0.338669 | 5_4:-26723275 | None:intergenic |
| TCAACACCAATTGGTTTGTA+AGG | 0.339629 | 5_4:-26725219 | None:intergenic |
| TGGTCAAATTCCTACCATTA+TGG | 0.345688 | 5_4:+26727311 | Msa0846530:CDS |
| TTGTATATACCTTAAAGAAT+TGG | 0.357864 | 5_4:-26726125 | None:intergenic |
| GCAATGTGATTTATCTTCCT+TGG | 0.359342 | 5_4:-26725255 | None:intergenic |
| GATGACTTTAGTAGTGTTCA+TGG | 0.363557 | 5_4:+26724258 | Msa0846530:CDS |
| ACTTCTCATTGTTAATATAC+AGG | 0.364918 | 5_4:+26725326 | Msa0846530:CDS |
| AAAAGGCATTCCCTGGTTCC+TGG | 0.378446 | 5_4:+26724944 | Msa0846530:CDS |
| GGTTTGTAAGGGCAGACATC+TGG | 0.386041 | 5_4:-26725207 | None:intergenic |
| GAACTCAGATTAAGGTCTTC+CGG | 0.386301 | 5_4:-26726042 | None:intergenic |
| ATGAGAAGTGAAGGTACATT+TGG | 0.388684 | 5_4:-26725312 | None:intergenic |
| ACAAATAAATCAACACCAAT+TGG | 0.393642 | 5_4:-26725228 | None:intergenic |
| ACTGGAGTAACTGGGTATTT+GGG | 0.402938 | 5_4:-26724421 | None:intergenic |
| AAAAGAAGGAGTCATAAATC+TGG | 0.410525 | 5_4:+26723299 | Msa0846530:CDS |
| CAATGAGTTAGTTGATCAAT+GGG | 0.411742 | 5_4:+26727355 | Msa0846530:three_prime_UTR |
| ACAATGAGTTAGTTGATCAA+TGG | 0.412291 | 5_4:+26727354 | Msa0846530:three_prime_UTR |
| CATCCTGCTTTGTAGATTCA+GGG | 0.413151 | 5_4:+26724453 | Msa0846530:CDS |
| TCTCTGCAGAACTCAGATTA+AGG | 0.418630 | 5_4:-26726050 | None:intergenic |
| TTCCAGAGTTGCCATTGAAA+AGG | 0.421683 | 5_4:+26723351 | Msa0846530:CDS |
| TTTCTTTATCGTCCGAGAGC+AGG | 0.427390 | 5_4:+26724895 | Msa0846530:CDS |
| ATTTCCCATGGCGTTGCCGC+TGG | 0.431870 | 5_4:-26724396 | None:intergenic |
| TCCAGTTTCAACTCAAGAAA+AGG | 0.437886 | 5_4:+26724927 | Msa0846530:CDS |
| TATATCTTAATATGTGATGA+TGG | 0.443248 | 5_4:+26727528 | Msa0846530:three_prime_UTR |
| TTTGTCTTCAAGAGCCATAA+TGG | 0.456248 | 5_4:-26727325 | None:intergenic |
| ATGAAAACCAAAATGTTGGC+TGG | 0.456829 | 5_4:+26723203 | None:intergenic |
| TTGAAAAGGGTTAGCAATGC+AGG | 0.457507 | 5_4:+26723365 | Msa0846530:CDS |
| AGGTCTATCTCAAAGTAGTT+AGG | 0.458243 | 5_4:-26726669 | None:intergenic |
| AGTTGTGGTTCAAAACCAAA+TGG | 0.458980 | 5_4:+26723260 | Msa0846530:CDS |
| AGCAGGATGAACTTTCATAC+TGG | 0.460053 | 5_4:-26724439 | None:intergenic |
| ATTGGTTTGACAGAGATTAG+TGG | 0.462765 | 5_4:+26725930 | Msa0846530:intron |
| TCCAGAGTTGCCATTGAAAA+GGG | 0.466355 | 5_4:+26723352 | Msa0846530:CDS |
| CTTCGAGACCGTGTAAAGAA+TGG | 0.470132 | 5_4:+26726738 | Msa0846530:CDS |
| TTTCGCCAGCGGCAACGCCA+TGG | 0.474812 | 5_4:+26724391 | Msa0846530:CDS |
| TATCCTGCTAGCATGTTCAT+TGG | 0.475103 | 5_4:+26725485 | Msa0846530:CDS |
| AAGAATGGAATACTTGATGT+TGG | 0.478006 | 5_4:+26726753 | Msa0846530:CDS |
| AATTATGCAAAGTAACATAT+AGG | 0.478112 | 5_4:-26727560 | None:intergenic |
| ATGAGATGGAAAAGGTTAAA+GGG | 0.481261 | 5_4:+26725956 | Msa0846530:CDS |
| TTCTTTATCGTCCGAGAGCA+GGG | 0.483123 | 5_4:+26724896 | Msa0846530:CDS |
| AAGTTAGCTTCTACCACAAT+GGG | 0.484343 | 5_4:+26723236 | Msa0846530:CDS |
| TCCTCGATATATAGCTAAAA+CGG | 0.484530 | 5_4:-26726701 | None:intergenic |
| GTCTGCCCTTACAAACCAAT+TGG | 0.485570 | 5_4:+26725213 | Msa0846530:CDS |
| TCTCAGTGAATTTGTTCACC+TGG | 0.488032 | 5_4:+26723409 | Msa0846530:CDS |
| GTTGTCAGAGAATTTCGAAA+AGG | 0.488281 | 5_4:+26725550 | Msa0846530:CDS |
| TTTGACTATGGTATTGAACC+TGG | 0.496024 | 5_4:-26723499 | None:intergenic |
| ACTAAAGTCATCATCTGAAT+CGG | 0.496214 | 5_4:-26724247 | None:intergenic |
| TTTGGCTGGAGTAGTTAATC+CGG | 0.496798 | 5_4:+26726023 | Msa0846530:CDS |
| GAAATTACAGACCAGGAACC+AGG | 0.499193 | 5_4:-26724955 | None:intergenic |
| AGAGCAAGGGTCACAAAAGA+AGG | 0.502944 | 5_4:+26723285 | Msa0846530:CDS |
| TTCGCCAGCGGCAACGCCAT+GGG | 0.506780 | 5_4:+26724392 | Msa0846530:CDS |
| ATTGGTGATGCCAATGGAGA+AGG | 0.509060 | 5_4:+26725503 | Msa0846530:CDS |
| AGTCAAACCATGCATCCTCT+TGG | 0.515815 | 5_4:-26724203 | None:intergenic |
| TTGATTTATTTGTGAGTCCA+AGG | 0.519202 | 5_4:+26725238 | Msa0846530:CDS |
| AAGCAACACAACACTTGCTC+AGG | 0.519810 | 5_4:-26727258 | None:intergenic |
| TTTACAGGCACAAAAGGAAG+AGG | 0.525168 | 5_4:+26727230 | Msa0846530:intron |
| AAGGCTCAAGCCTTCTCCAT+TGG | 0.526944 | 5_4:-26725513 | None:intergenic |
| GTGTTGAGGACGCGAAAGCA+CGG | 0.533305 | 5_4:-26726103 | None:intergenic |
| AGATTCAGGGTGCAAATATG+AGG | 0.535593 | 5_4:+26724466 | Msa0846530:CDS |
| AGTGGATGATGAGATGGAAA+AGG | 0.536497 | 5_4:+26725948 | Msa0846530:CDS |
| TGATGTTGGATTAACTATCC+AGG | 0.538342 | 5_4:+26726767 | Msa0846530:CDS |
| ACTCAAGAAAAGGCATTCCC+TGG | 0.539875 | 5_4:+26724937 | Msa0846530:CDS |
| GAGATTAGTGGATGATGAGA+TGG | 0.540497 | 5_4:+26725942 | Msa0846530:intron |
| AAAATTGACTTTGTTAACCA+TGG | 0.541173 | 5_4:+26727291 | Msa0846530:CDS |
| TGTTGAGGACGCGAAAGCAC+GGG | 0.543844 | 5_4:-26726102 | None:intergenic |
| TCACCAATGAACATGCTAGC+AGG | 0.549372 | 5_4:-26725488 | None:intergenic |
| ATGGCGTTGCCGCTGGCGAA+AGG | 0.551383 | 5_4:-26724389 | None:intergenic |
| TTTGGATGTTCACCGACACT+TGG | 0.551399 | 5_4:-26725294 | None:intergenic |
| CAACACCAATTGGTTTGTAA+GGG | 0.551510 | 5_4:-26725218 | None:intergenic |
| AACCACCTTTGTCAAAATCC+AGG | 0.552169 | 5_4:-26723427 | None:intergenic |
| TGAAACCTCTGATCTCCTAC+AGG | 0.552393 | 5_4:-26723456 | None:intergenic |
| CTGCGGAGCTTGAACACTGA+AGG | 0.553302 | 5_4:-26724979 | None:intergenic |
| GCACCCTGAATCTACAAAGC+AGG | 0.559784 | 5_4:-26724456 | None:intergenic |
| CAAGTATTCCATTCTTTACA+CGG | 0.563804 | 5_4:-26726746 | None:intergenic |
| GTTGTGGTTCAAAACCAAAT+GGG | 0.565547 | 5_4:+26723261 | Msa0846530:CDS |
| AAAATGTTGGACTTAAGAGA+AGG | 0.568369 | 5_4:-26727502 | None:intergenic |
| GGTATTTGGGACATTTCCCA+TGG | 0.571921 | 5_4:-26724408 | None:intergenic |
| GATCAATGGGGAAAATGGAA+AGG | 0.573677 | 5_4:+26727368 | Msa0846530:three_prime_UTR |
| TACCTTAAGATAGATAAGAA+TGG | 0.574499 | 5_4:+26724503 | Msa0846530:CDS |
| TCTTCAAGAGCCATAATGGT+AGG | 0.575430 | 5_4:-26727321 | None:intergenic |
| TAAGGGCAGACATCTGGAGC+AGG | 0.575624 | 5_4:-26725201 | None:intergenic |
| GGAACTTGAATCCCTGCTCT+CGG | 0.580440 | 5_4:-26724907 | None:intergenic |
| GAAGTTAGCTTCTACCACAA+TGG | 0.581341 | 5_4:+26723235 | Msa0846530:CDS |
| GAGTATACCAAGAGGATGCA+TGG | 0.588884 | 5_4:+26724196 | Msa0846530:CDS |
| TTGACTATGGTATTGAACCT+GGG | 0.589577 | 5_4:-26723498 | None:intergenic |
| TTTATGTAGAGATAAGCAAA+AGG | 0.589636 | 5_4:+26725176 | Msa0846530:intron |
| ACCTTAAAGAATTGGTGTTG+AGG | 0.589868 | 5_4:-26726117 | None:intergenic |
| AAAACCAAATGGGAAGAGCA+AGG | 0.596794 | 5_4:+26723271 | Msa0846530:CDS |
| AACATGCTAGCAGGATATGT+AGG | 0.599426 | 5_4:-26725479 | None:intergenic |
| TTTAGCTATATATCGAGGAA+GGG | 0.604329 | 5_4:+26726705 | Msa0846530:CDS |
| AAACCAAATGGGAAGAGCAA+GGG | 0.607442 | 5_4:+26723272 | Msa0846530:CDS |
| GGAAAATGGAAAGGAAAGGA+AGG | 0.607610 | 5_4:+26727377 | Msa0846530:three_prime_UTR |
| ATGGGGAAAATGGAAAGGAA+AGG | 0.612063 | 5_4:+26727373 | Msa0846530:three_prime_UTR |
| CATATTGAACTTCCAAGTGT+CGG | 0.612685 | 5_4:+26725282 | Msa0846530:CDS |
| TGTCAAGTTTCATCTTACCC+AGG | 0.615127 | 5_4:+26723481 | Msa0846530:CDS |
| AGCTAAAACGGTGTATGTCG+AGG | 0.615162 | 5_4:-26726689 | None:intergenic |
| ACAACTTAAAATATAGTACA+AGG | 0.619074 | 5_4:-26725532 | None:intergenic |
| GGCTGCCTGTAGGAGATCAG+AGG | 0.619461 | 5_4:+26723451 | Msa0846530:CDS |
| TCTACCACAATGGGAAGTTG+TGG | 0.627755 | 5_4:+26723245 | Msa0846530:CDS |
| CATAGTCAAATAGATACCAA+TGG | 0.629508 | 5_4:+26723512 | Msa0846530:CDS |
| ATGTTCATTGGTGATGCCAA+TGG | 0.630081 | 5_4:+26725497 | Msa0846530:CDS |
| TGAAGGCGAAATTACAGACC+AGG | 0.634925 | 5_4:-26724962 | None:intergenic |
| AAACTTATACATGCTTACAA+TGG | 0.638264 | 5_4:+26726075 | Msa0846530:CDS |
| AAGGTGGTTCGGCTGCCTGT+AGG | 0.648103 | 5_4:+26723441 | Msa0846530:CDS |
| ATATTAACAATGAGAAGTGA+AGG | 0.651751 | 5_4:-26725321 | None:intergenic |
| ACTTTCATACTGGAGTAACT+GGG | 0.653433 | 5_4:-26724429 | None:intergenic |
| TAATGGTAGGAATTTGACCA+TGG | 0.659554 | 5_4:-26727308 | None:intergenic |
| TGAACCACAACTTCCCATTG+TGG | 0.662536 | 5_4:-26723249 | None:intergenic |
| AAAGGTTAAAGGGTACGCAA+AGG | 0.665305 | 5_4:+26725966 | Msa0846530:CDS |
| AGCAATGCAGGAAACCGCGT+GGG | 0.670211 | 5_4:+26723377 | Msa0846530:CDS |
| TTGATCTTATCCTGAAAACA+CGG | 0.674237 | 5_4:-26725581 | None:intergenic |
| AAATTACAGACCAGGAACCA+GGG | 0.679337 | 5_4:-26724954 | None:intergenic |
| TGGCAACTCTGGAAGCGCAG+AGG | 0.680202 | 5_4:-26723342 | None:intergenic |
| CATAAATCTGGAAAGCGCAG+AGG | 0.689757 | 5_4:+26723311 | Msa0846530:CDS |
| TAGCAATGCAGGAAACCGCG+TGG | 0.700351 | 5_4:+26723376 | Msa0846530:CDS |
| TTAATCTGAGTTCTGCAGAG+AGG | 0.720842 | 5_4:+26726052 | Msa0846530:CDS |
| AATGAGTTAGTTGATCAATG+GGG | 0.746559 | 5_4:+26727356 | Msa0846530:three_prime_UTR |
| GACTTTAGTAGTGTTCATGG+AGG | 0.769441 | 5_4:+26724261 | Msa0846530:CDS |
| TGAGATTAAAATCTCCCACG+CGG | 0.794497 | 5_4:-26723391 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATTTATATATTCCTTTA+TGG | + | chr5_4:26724350-26724369 | Msa0846530:intron | 10.0% |
| !! | TAATAATTTAAGAAAATAGA+AGG | - | chr5_4:26725743-26725762 | None:intergenic | 10.0% |
| !!! | TATTAATGTATTTTAAATAC+AGG | + | chr5_4:26726644-26726663 | Msa0846530:intron | 10.0% |
| !!! | ATTAATGTATTTTAAATACA+GGG | + | chr5_4:26726645-26726664 | Msa0846530:intron | 10.0% |
| !! | ATTTGTTTAATAAAAAGTAA+TGG | - | chr5_4:26727061-26727080 | None:intergenic | 10.0% |
| !! | TTAAGATATAAAAAAAATGT+TGG | - | chr5_4:26727518-26727537 | None:intergenic | 10.0% |
| !! | AAAATTTGTGTATTCATTAT+TGG | + | chr5_4:26724099-26724118 | Msa0846530:intron | 15.0% |
| !!! | CATATATAAATACCAATTTT+TGG | - | chr5_4:26725149-26725168 | None:intergenic | 15.0% |
| !!! | ATTTTTCAACATTTTCAAAT+AGG | - | chr5_4:26725420-26725439 | None:intergenic | 15.0% |
| !! | AAAACATGAAATGAAAACAA+AGG | - | chr5_4:26724649-26724668 | None:intergenic | 20.0% |
| !! | GAATGATAGACATAAATTAT+TGG | - | chr5_4:26724702-26724721 | None:intergenic | 20.0% |
| !!! | TATTCAATTCAGTTTTGTTA+TGG | + | chr5_4:26725373-26725392 | Msa0846530:intron | 20.0% |
| !! | TTGATCACATAATTTAATCA+CGG | + | chr5_4:26725439-26725458 | Msa0846530:intron | 20.0% |
| !! | ACAACTTAAAATATAGTACA+AGG | - | chr5_4:26725535-26725554 | None:intergenic | 20.0% |
| !! | TTCAATCAAGTAAATATTGA+TGG | - | chr5_4:26725624-26725643 | None:intergenic | 20.0% |
| !! | AATTGAATCTAACTTTATGT+TGG | - | chr5_4:26725720-26725739 | None:intergenic | 20.0% |
| !! | TTGTATATACCTTAAAGAAT+TGG | - | chr5_4:26726128-26726147 | None:intergenic | 20.0% |
| !! | ATACAAATTTATGTCTTGAT+CGG | + | chr5_4:26726142-26726161 | Msa0846530:intron | 20.0% |
| !!! | CTCATCATTTTAAATTATGT+AGG | - | chr5_4:26726472-26726491 | None:intergenic | 20.0% |
| !! | CAACTATTATAAGTTTATAG+TGG | - | chr5_4:26726500-26726519 | None:intergenic | 20.0% |
| !! | TTGATAAAACTTATTAATCC+CGG | - | chr5_4:26727098-26727117 | None:intergenic | 20.0% |
| !! | CCTGTAAAAACATAAATATA+GGG | - | chr5_4:26727218-26727237 | None:intergenic | 20.0% |
| !! | TATATCTTAATATGTGATGA+TGG | + | chr5_4:26727528-26727547 | Msa0846530:three_prime_UTR | 20.0% |
| !! | AATTATGCAAAGTAACATAT+AGG | - | chr5_4:26727563-26727582 | None:intergenic | 20.0% |
| !! | TAATATTACACAACACAATT+TGG | - | chr5_4:26727592-26727611 | None:intergenic | 20.0% |
| ! | AAAGCTAAAAATAACACCAA+AGG | - | chr5_4:26723551-26723570 | None:intergenic | 25.0% |
| ! | TGTCATTATCTTGTCAAAAA+AGG | - | chr5_4:26723624-26723643 | None:intergenic | 25.0% |
| ! | AAAATACAAAGTTGAAACGT+GGG | - | chr5_4:26723737-26723756 | None:intergenic | 25.0% |
| ! | TAATGCAAACAATACAATGT+CGG | - | chr5_4:26724015-26724034 | None:intergenic | 25.0% |
| ! | TTTGTGTATTCATTATTGGA+AGG | + | chr5_4:26724103-26724122 | Msa0846530:intron | 25.0% |
| ! | TATTCATTATTGGAAGGAAT+CGG | + | chr5_4:26724109-26724128 | Msa0846530:intron | 25.0% |
| ! | AGTAAGTTATGTTAACTCTA+AGG | - | chr5_4:26724139-26724158 | None:intergenic | 25.0% |
| ! | TACCTTAAGATAGATAAGAA+TGG | + | chr5_4:26724503-26724522 | Msa0846530:CDS | 25.0% |
| ! | TGTTAAAGCCTAAAAACATT+CGG | + | chr5_4:26724792-26724811 | Msa0846530:intron | 25.0% |
| !! | ATTAACTTCCGAATGTTTTT+AGG | - | chr5_4:26724803-26724822 | None:intergenic | 25.0% |
| ! | ACAATAATGAATTGTTGAAC+AGG | + | chr5_4:26724859-26724878 | Msa0846530:intron | 25.0% |
| ! | GTTCATTTACTTCCAAAAAT+TGG | + | chr5_4:26725134-26725153 | Msa0846530:intron | 25.0% |
| ! | TTTATGTAGAGATAAGCAAA+AGG | + | chr5_4:26725176-26725195 | Msa0846530:intron | 25.0% |
| ! | ACAAATAAATCAACACCAAT+TGG | - | chr5_4:26725231-26725250 | None:intergenic | 25.0% |
| ! | ATATTAACAATGAGAAGTGA+AGG | - | chr5_4:26725324-26725343 | None:intergenic | 25.0% |
| ! | ACTTCTCATTGTTAATATAC+AGG | + | chr5_4:26725326-26725345 | Msa0846530:CDS | 25.0% |
| !! | TTCATAGGTTGAAAATTCTA+GGG | + | chr5_4:26725808-26725827 | Msa0846530:intron | 25.0% |
| ! | TCTAATGAGAATGTCATATT+AGG | - | chr5_4:26725854-26725873 | None:intergenic | 25.0% |
| !!! | ATTTTGAGTCTTTCTCTAAA+GGG | - | chr5_4:26726003-26726022 | None:intergenic | 25.0% |
| !!! | AATTTTGAGTCTTTCTCTAA+AGG | - | chr5_4:26726004-26726023 | None:intergenic | 25.0% |
| !! | TAGAGAAAGACTCAAAATTT+TGG | + | chr5_4:26726005-26726024 | Msa0846530:CDS | 25.0% |
| ! | AAACTTATACATGCTTACAA+TGG | + | chr5_4:26726075-26726094 | Msa0846530:CDS | 25.0% |
| ! | TTGAATCTGATTATTCAGAA+AGG | + | chr5_4:26726206-26726225 | Msa0846530:intron | 25.0% |
| ! | TGAATCTGATTATTCAGAAA+GGG | + | chr5_4:26726207-26726226 | Msa0846530:intron | 25.0% |
| !! | CTTAGAATCTGATTTTTGTA+TGG | + | chr5_4:26726349-26726368 | Msa0846530:intron | 25.0% |
| ! | TAATAATGTGTGAAATCACA+TGG | - | chr5_4:26726629-26726648 | None:intergenic | 25.0% |
| ! | AATAGCATATGAACTTATAG+CGG | - | chr5_4:26727020-26727039 | None:intergenic | 25.0% |
| !!! | CCCTATATTTATGTTTTTAC+AGG | + | chr5_4:26727215-26727234 | Msa0846530:intron | 25.0% |
| ! | GCCTGTAAAAACATAAATAT+AGG | - | chr5_4:26727219-26727238 | None:intergenic | 25.0% |
| !! | AAAATTGACTTTGTTAACCA+TGG | + | chr5_4:26727291-26727310 | Msa0846530:CDS | 25.0% |
| !!! | TATGATTTTGATTATGAGAG+AGG | + | chr5_4:26727612-26727631 | Msa0846530:three_prime_UTR | 25.0% |
| AAAAGAAGGAGTCATAAATC+TGG | + | chr5_4:26723299-26723318 | Msa0846530:CDS | 30.0% | |
| CATTGGTATCTATTTGACTA+TGG | - | chr5_4:26723514-26723533 | None:intergenic | 30.0% | |
| CATAGTCAAATAGATACCAA+TGG | + | chr5_4:26723512-26723531 | Msa0846530:CDS | 30.0% | |
| CCATCATAACAATATCATCA+AGG | - | chr5_4:26723578-26723597 | None:intergenic | 30.0% | |
| ! | CCTTGATGATATTGTTATGA+TGG | + | chr5_4:26723575-26723594 | Msa0846530:intron | 30.0% |
| GATAATGACAATGAACTTGT+TGG | + | chr5_4:26723634-26723653 | Msa0846530:intron | 30.0% | |
| !! | ACAATGAACTTGTTGGATTT+CGG | + | chr5_4:26723641-26723660 | Msa0846530:intron | 30.0% |
| CAAAATACAAAGTTGAAACG+TGG | - | chr5_4:26723738-26723757 | None:intergenic | 30.0% | |
| TAGTCAAAGAAACAATCGTT+TGG | - | chr5_4:26723830-26723849 | None:intergenic | 30.0% | |
| ATTTGCATGAAAATAGCAAC+AGG | + | chr5_4:26723912-26723931 | Msa0846530:intron | 30.0% | |
| ACTAAAGTCATCATCTGAAT+CGG | - | chr5_4:26724250-26724269 | None:intergenic | 30.0% | |
| CTCCATTCTTATCTATCTTA+AGG | - | chr5_4:26724508-26724527 | None:intergenic | 30.0% | |
| TTGATTTATTTGTGAGTCCA+AGG | + | chr5_4:26725238-26725257 | Msa0846530:CDS | 30.0% | |
| TTGATCTTATCCTGAAAACA+CGG | - | chr5_4:26725584-26725603 | None:intergenic | 30.0% | |
| ! | CTTCATAGGTTGAAAATTCT+AGG | + | chr5_4:26725807-26725826 | Msa0846530:intron | 30.0% |
| !!! | TAGGGTACATTTTTTGAAGT+TGG | + | chr5_4:26725826-26725845 | Msa0846530:intron | 30.0% |
| ATGAGATGGAAAAGGTTAAA+GGG | + | chr5_4:26725956-26725975 | Msa0846530:CDS | 30.0% | |
| GAATCTGATTATTCAGAAAG+GGG | + | chr5_4:26726208-26726227 | Msa0846530:intron | 30.0% | |
| AATGGTTCAAATCAACTTTG+AGG | + | chr5_4:26726252-26726271 | Msa0846530:intron | 30.0% | |
| !! | AACTATTTGATAACTTGCTC+AGG | - | chr5_4:26726578-26726597 | None:intergenic | 30.0% |
| TCCTCGATATATAGCTAAAA+CGG | - | chr5_4:26726704-26726723 | None:intergenic | 30.0% | |
| !! | TTTTAGCTATATATCGAGGA+AGG | + | chr5_4:26726704-26726723 | Msa0846530:CDS | 30.0% |
| TTTAGCTATATATCGAGGAA+GGG | + | chr5_4:26726705-26726724 | Msa0846530:CDS | 30.0% | |
| CAAGTATTCCATTCTTTACA+CGG | - | chr5_4:26726749-26726768 | None:intergenic | 30.0% | |
| AAGAATGGAATACTTGATGT+TGG | + | chr5_4:26726753-26726772 | Msa0846530:CDS | 30.0% | |
| ACTTCAAACTAACGATTTCA+AGG | - | chr5_4:26726804-26726823 | None:intergenic | 30.0% | |
| !! | ATGTTAATTCAGTTCTAGAG+AGG | + | chr5_4:26726868-26726887 | Msa0846530:intron | 30.0% |
| !! | TATGTTTTTACAGGCACAAA+AGG | + | chr5_4:26727224-26727243 | Msa0846530:intron | 30.0% |
| ACAATGAGTTAGTTGATCAA+TGG | + | chr5_4:26727354-26727373 | Msa0846530:three_prime_UTR | 30.0% | |
| CAATGAGTTAGTTGATCAAT+GGG | + | chr5_4:26727355-26727374 | Msa0846530:three_prime_UTR | 30.0% | |
| AATGAGTTAGTTGATCAATG+GGG | + | chr5_4:26727356-26727375 | Msa0846530:three_prime_UTR | 30.0% | |
| AAAATGTTGGACTTAAGAGA+AGG | - | chr5_4:26727505-26727524 | None:intergenic | 30.0% | |
| ! | AAGTTAGCTTCTACCACAAT+GGG | + | chr5_4:26723236-26723255 | Msa0846530:CDS | 35.0% |
| AGTTGTGGTTCAAAACCAAA+TGG | + | chr5_4:26723260-26723279 | Msa0846530:CDS | 35.0% | |
| GTTGTGGTTCAAAACCAAAT+GGG | + | chr5_4:26723261-26723280 | Msa0846530:CDS | 35.0% | |
| ! | TTGACTATGGTATTGAACCT+GGG | - | chr5_4:26723501-26723520 | None:intergenic | 35.0% |
| ! | TTTGACTATGGTATTGAACC+TGG | - | chr5_4:26723502-26723521 | None:intergenic | 35.0% |
| AGGAGCAAAAAAGTTACCAT+TGG | - | chr5_4:26723531-26723550 | None:intergenic | 35.0% | |
| !!! | TGGTAACTTTTTTGCTCCTT+TGG | + | chr5_4:26723532-26723551 | Msa0846530:intron | 35.0% |
| !! | AACTTGTTGGATTTCGGATT+TGG | + | chr5_4:26723647-26723666 | Msa0846530:intron | 35.0% |
| AATCACACTATCTTCAATGC+TGG | + | chr5_4:26723689-26723708 | Msa0846530:intron | 35.0% | |
| TTGACCTGATTTACCAAAGT+TGG | + | chr5_4:26723755-26723774 | Msa0846530:intron | 35.0% | |
| ATTTACCAAAGTTGGAACGT+GGG | + | chr5_4:26723763-26723782 | Msa0846530:intron | 35.0% | |
| CTTGTTTATCAAAGAAGCCA+TGG | - | chr5_4:26723875-26723894 | None:intergenic | 35.0% | |
| ATCGATTAGACAATCCAGAT+CGG | - | chr5_4:26723971-26723990 | None:intergenic | 35.0% | |
| TCTAATCGATCAAGACCAAA+TGG | + | chr5_4:26723981-26724000 | Msa0846530:intron | 35.0% | |
| AACAATACAATGTCGGAATG+TGG | - | chr5_4:26724008-26724027 | None:intergenic | 35.0% | |
| ! | GACAGTTGACATTCGAATTT+TGG | - | chr5_4:26724042-26724061 | None:intergenic | 35.0% |
| ! | ACAAATTTTGTGCAGTCATG+TGG | - | chr5_4:26724088-26724107 | None:intergenic | 35.0% |
| GATGACTTTAGTAGTGTTCA+TGG | + | chr5_4:26724258-26724277 | Msa0846530:CDS | 35.0% | |
| ! | CTATTGACTATGTTGAGCAT+TGG | + | chr5_4:26724305-26724324 | Msa0846530:intron | 35.0% |
| AACAATCTGTTCGACCATAA+AGG | - | chr5_4:26724367-26724386 | None:intergenic | 35.0% | |
| ACTTTCATACTGGAGTAACT+GGG | - | chr5_4:26724432-26724451 | None:intergenic | 35.0% | |
| AACTTTCATACTGGAGTAAC+TGG | - | chr5_4:26724433-26724452 | None:intergenic | 35.0% | |
| TCCAGTTTCAACTCAAGAAA+AGG | + | chr5_4:26724927-26724946 | Msa0846530:CDS | 35.0% | |
| ACTCCTTCTATGTGAATTGT+CGG | - | chr5_4:26725056-26725075 | None:intergenic | 35.0% | |
| ACGACTGTGTCAATGTTATT+CGG | - | chr5_4:26725111-26725130 | None:intergenic | 35.0% | |
| !! | CAACACCAATTGGTTTGTAA+GGG | - | chr5_4:26725221-26725240 | None:intergenic | 35.0% |
| !! | TCAACACCAATTGGTTTGTA+AGG | - | chr5_4:26725222-26725241 | None:intergenic | 35.0% |
| GCAATGTGATTTATCTTCCT+TGG | - | chr5_4:26725258-26725277 | None:intergenic | 35.0% | |
| CATATTGAACTTCCAAGTGT+CGG | + | chr5_4:26725282-26725301 | Msa0846530:CDS | 35.0% | |
| ! | ATGAGAAGTGAAGGTACATT+TGG | - | chr5_4:26725315-26725334 | None:intergenic | 35.0% |
| GTTGTCAGAGAATTTCGAAA+AGG | + | chr5_4:26725550-26725569 | Msa0846530:CDS | 35.0% | |
| !! | GTGTTTTCAGGATAAGATCA+AGG | + | chr5_4:26725583-26725602 | Msa0846530:CDS | 35.0% |
| GCACTTTCAATATGAAGTGT+CGG | - | chr5_4:26725677-26725696 | None:intergenic | 35.0% | |
| ! | ATTTTCAACCTATGAAGCAC+TGG | - | chr5_4:26725804-26725823 | None:intergenic | 35.0% |
| !! | ATTGGTTTGACAGAGATTAG+TGG | + | chr5_4:26725930-26725949 | Msa0846530:intron | 35.0% |
| GATGAGATGGAAAAGGTTAA+AGG | + | chr5_4:26725955-26725974 | Msa0846530:CDS | 35.0% | |
| !! | GAAAGACTCAAAATTTTGGC+TGG | + | chr5_4:26726009-26726028 | Msa0846530:CDS | 35.0% |
| TCCTCAACACCAATTCTTTA+AGG | + | chr5_4:26726116-26726135 | Msa0846530:CDS | 35.0% | |
| !! | ACCTTAAAGAATTGGTGTTG+AGG | - | chr5_4:26726120-26726139 | None:intergenic | 35.0% |
| TCTACTTCTCAAAGAACTGT+TGG | + | chr5_4:26726178-26726197 | Msa0846530:intron | 35.0% | |
| !!! | GCACTATTCTGTGGTTTTAA+TGG | + | chr5_4:26726234-26726253 | Msa0846530:intron | 35.0% |
| ! | AGTTGATTCAAACCAGCTTA+TGG | - | chr5_4:26726391-26726410 | None:intergenic | 35.0% |
| CATGGACAAGAAGAATCATT+CGG | - | chr5_4:26726611-26726630 | None:intergenic | 35.0% | |
| AGGTCTATCTCAAAGTAGTT+AGG | - | chr5_4:26726672-26726691 | None:intergenic | 35.0% | |
| !!! | ACCGTTTTAGCTATATATCG+AGG | + | chr5_4:26726700-26726719 | Msa0846530:CDS | 35.0% |
| TGATGTTGGATTAACTATCC+AGG | + | chr5_4:26726767-26726786 | Msa0846530:CDS | 35.0% | |
| TTCAAGGATCAAACTATACC+TGG | - | chr5_4:26726788-26726807 | None:intergenic | 35.0% | |
| GACTTTAGACTAAAGTCGTT+AGG | + | chr5_4:26726912-26726931 | Msa0846530:intron | 35.0% | |
| CAAATTAAACCTTGCATGTC+CGG | + | chr5_4:26727076-26727095 | Msa0846530:intron | 35.0% | |
| AAATTAAACCTTGCATGTCC+GGG | + | chr5_4:26727077-26727096 | Msa0846530:intron | 35.0% | |
| TATTAGCCAATGTGAGACTA+GGG | + | chr5_4:26727127-26727146 | Msa0846530:intron | 35.0% | |
| TAATGGTAGGAATTTGACCA+TGG | - | chr5_4:26727311-26727330 | None:intergenic | 35.0% | |
| TGGTCAAATTCCTACCATTA+TGG | + | chr5_4:26727311-26727330 | Msa0846530:CDS | 35.0% | |
| TTTGTCTTCAAGAGCCATAA+TGG | - | chr5_4:26727328-26727347 | None:intergenic | 35.0% | |
| TAGTTGATCAATGGGGAAAA+TGG | + | chr5_4:26727363-26727382 | Msa0846530:three_prime_UTR | 35.0% | |
| ! | GAAGTTAGCTTCTACCACAA+TGG | + | chr5_4:26723235-26723254 | Msa0846530:CDS | 40.0% |
| AAAACCAAATGGGAAGAGCA+AGG | + | chr5_4:26723271-26723290 | Msa0846530:CDS | 40.0% | |
| AAACCAAATGGGAAGAGCAA+GGG | + | chr5_4:26723272-26723291 | Msa0846530:CDS | 40.0% | |
| TTCCAGAGTTGCCATTGAAA+AGG | + | chr5_4:26723351-26723370 | Msa0846530:CDS | 40.0% | |
| TCCAGAGTTGCCATTGAAAA+GGG | + | chr5_4:26723352-26723371 | Msa0846530:CDS | 40.0% | |
| ! | GCATTGCTAACCCTTTTCAA+TGG | - | chr5_4:26723365-26723384 | None:intergenic | 40.0% |
| ! | TTGAAAAGGGTTAGCAATGC+AGG | + | chr5_4:26723365-26723384 | Msa0846530:CDS | 40.0% |
| TGAGATTAAAATCTCCCACG+CGG | - | chr5_4:26723394-26723413 | None:intergenic | 40.0% | |
| ! | TCTCAGTGAATTTGTTCACC+TGG | + | chr5_4:26723409-26723428 | Msa0846530:CDS | 40.0% |
| !! | GTTCACCTGGATTTTGACAA+AGG | + | chr5_4:26723422-26723441 | Msa0846530:CDS | 40.0% |
| AACCACCTTTGTCAAAATCC+AGG | - | chr5_4:26723430-26723449 | None:intergenic | 40.0% | |
| !! | GGATTTTGACAAAGGTGGTT+CGG | + | chr5_4:26723430-26723449 | Msa0846530:CDS | 40.0% |
| TGTCAAGTTTCATCTTACCC+AGG | + | chr5_4:26723481-26723500 | Msa0846530:CDS | 40.0% | |
| CGTTCCAACTTTGGTAAATC+AGG | - | chr5_4:26723762-26723781 | None:intergenic | 40.0% | |
| GATTTACCAAAGTTGGAACG+TGG | + | chr5_4:26723762-26723781 | Msa0846530:intron | 40.0% | |
| GAAAATAGCAACAGGATCCA+TGG | + | chr5_4:26723920-26723939 | Msa0846530:intron | 40.0% | |
| TGCATAACTCAGTCAAACCA+TGG | - | chr5_4:26723940-26723959 | None:intergenic | 40.0% | |
| TCGATTAGACAATCCAGATC+GGG | - | chr5_4:26723970-26723989 | None:intergenic | 40.0% | |
| ACTGTCTGATCTTGATCAGA+CGG | + | chr5_4:26724056-26724075 | Msa0846530:intron | 40.0% | |
| ! | AGCACTTGTGTACATTTTGC+AGG | + | chr5_4:26724174-26724193 | Msa0846530:intron | 40.0% |
| !! | TTTTGCAGGAGTATACCAAG+AGG | + | chr5_4:26724188-26724207 | Msa0846530:intron | 40.0% |
| GACTTTAGTAGTGTTCATGG+AGG | + | chr5_4:26724261-26724280 | Msa0846530:CDS | 40.0% | |
| ACTGGAGTAACTGGGTATTT+GGG | - | chr5_4:26724424-26724443 | None:intergenic | 40.0% | |
| TACTGGAGTAACTGGGTATT+TGG | - | chr5_4:26724425-26724444 | None:intergenic | 40.0% | |
| AGCAGGATGAACTTTCATAC+TGG | - | chr5_4:26724442-26724461 | None:intergenic | 40.0% | |
| TCATCCTGCTTTGTAGATTC+AGG | + | chr5_4:26724452-26724471 | Msa0846530:CDS | 40.0% | |
| CATCCTGCTTTGTAGATTCA+GGG | + | chr5_4:26724453-26724472 | Msa0846530:CDS | 40.0% | |
| AGATTCAGGGTGCAAATATG+AGG | + | chr5_4:26724466-26724485 | Msa0846530:CDS | 40.0% | |
| !!! | GCCTTTTCTTGAGTTGAAAC+TGG | - | chr5_4:26724931-26724950 | None:intergenic | 40.0% |
| AAATTACAGACCAGGAACCA+GGG | - | chr5_4:26724957-26724976 | None:intergenic | 40.0% | |
| ACCTGAAAAATGTTTCGCTG+CGG | - | chr5_4:26724999-26725018 | None:intergenic | 40.0% | |
| TAGAAGGAGTTTCTGTTGTC+TGG | + | chr5_4:26725066-26725085 | Msa0846530:intron | 40.0% | |
| AACATGCTAGCAGGATATGT+AGG | - | chr5_4:26725482-26725501 | None:intergenic | 40.0% | |
| TATCCTGCTAGCATGTTCAT+TGG | + | chr5_4:26725485-26725504 | Msa0846530:CDS | 40.0% | |
| !! | ATGTTCATTGGTGATGCCAA+TGG | + | chr5_4:26725497-26725516 | Msa0846530:CDS | 40.0% |
| ! | GAGATTAGTGGATGATGAGA+TGG | + | chr5_4:26725942-26725961 | Msa0846530:intron | 40.0% |
| AGTGGATGATGAGATGGAAA+AGG | + | chr5_4:26725948-26725967 | Msa0846530:CDS | 40.0% | |
| ! | AAAGGTTAAAGGGTACGCAA+AGG | + | chr5_4:26725966-26725985 | Msa0846530:CDS | 40.0% |
| TTTGGCTGGAGTAGTTAATC+CGG | + | chr5_4:26726023-26726042 | Msa0846530:CDS | 40.0% | |
| GAACTCAGATTAAGGTCTTC+CGG | - | chr5_4:26726045-26726064 | None:intergenic | 40.0% | |
| TCTCTGCAGAACTCAGATTA+AGG | - | chr5_4:26726053-26726072 | None:intergenic | 40.0% | |
| TTAATCTGAGTTCTGCAGAG+AGG | + | chr5_4:26726052-26726071 | Msa0846530:CDS | 40.0% | |
| AAACTCGCTTTACCATAAGC+TGG | + | chr5_4:26726376-26726395 | Msa0846530:intron | 40.0% | |
| TTATTAATCCCGGACATGCA+AGG | - | chr5_4:26727088-26727107 | None:intergenic | 40.0% | |
| CTATTAGCCAATGTGAGACT+AGG | + | chr5_4:26727126-26727145 | Msa0846530:intron | 40.0% | |
| GAAAAACCCTAGTCTCACAT+TGG | - | chr5_4:26727136-26727155 | None:intergenic | 40.0% | |
| TTTACAGGCACAAAAGGAAG+AGG | + | chr5_4:26727230-26727249 | Msa0846530:intron | 40.0% | |
| TCTTCAAGAGCCATAATGGT+AGG | - | chr5_4:26727324-26727343 | None:intergenic | 40.0% | |
| GATCAATGGGGAAAATGGAA+AGG | + | chr5_4:26727368-26727387 | Msa0846530:three_prime_UTR | 40.0% | |
| ATGGGGAAAATGGAAAGGAA+AGG | + | chr5_4:26727373-26727392 | Msa0846530:three_prime_UTR | 40.0% | |
| GGAAAATGGAAAGGAAAGGA+AGG | + | chr5_4:26727377-26727396 | Msa0846530:three_prime_UTR | 40.0% | |
| GGAAAGGAAGGAAAGATTTC+TGG | + | chr5_4:26727389-26727408 | Msa0846530:three_prime_UTR | 40.0% | |
| !! | TGAGAGAGGCTTTTTAGTAG+TGG | + | chr5_4:26727626-26727645 | Msa0846530:three_prime_UTR | 40.0% |
| TCTACCACAATGGGAAGTTG+TGG | + | chr5_4:26723245-26723264 | Msa0846530:CDS | 45.0% | |
| TGAACCACAACTTCCCATTG+TGG | - | chr5_4:26723252-26723271 | None:intergenic | 45.0% | |
| AGAGCAAGGGTCACAAAAGA+AGG | + | chr5_4:26723285-26723304 | Msa0846530:CDS | 45.0% | |
| ! | CATAAATCTGGAAAGCGCAG+AGG | + | chr5_4:26723311-26723330 | Msa0846530:CDS | 45.0% |
| ! | ACCCTTTTCAATGGCAACTC+TGG | - | chr5_4:26723356-26723375 | None:intergenic | 45.0% |
| !! | CACCTGGATTTTGACAAAGG+TGG | + | chr5_4:26723425-26723444 | Msa0846530:CDS | 45.0% |
| TGAAACCTCTGATCTCCTAC+AGG | - | chr5_4:26723459-26723478 | None:intergenic | 45.0% | |
| GATAACCCACGTTCCAACTT+TGG | - | chr5_4:26723771-26723790 | None:intergenic | 45.0% | |
| TGAATTTGATCTGATGCGCC+AGG | + | chr5_4:26723791-26723810 | Msa0846530:intron | 45.0% | |
| AAGAAGCCATGGCAACTCTA+CGG | - | chr5_4:26723864-26723883 | None:intergenic | 45.0% | |
| CGATTAGACAATCCAGATCG+GGG | - | chr5_4:26723969-26723988 | None:intergenic | 45.0% | |
| ATGTCGGAATGTGGACCATT+TGG | - | chr5_4:26723999-26724018 | None:intergenic | 45.0% | |
| GAGTATACCAAGAGGATGCA+TGG | + | chr5_4:26724196-26724215 | Msa0846530:CDS | 45.0% | |
| AGTCAAACCATGCATCCTCT+TGG | - | chr5_4:26724206-26724225 | None:intergenic | 45.0% | |
| ! | GATTGTTTTCCTTTCGCCAG+CGG | + | chr5_4:26724380-26724399 | Msa0846530:intron | 45.0% |
| ! | GGTATTTGGGACATTTCCCA+TGG | - | chr5_4:26724411-26724430 | None:intergenic | 45.0% |
| TTTCTTTATCGTCCGAGAGC+AGG | + | chr5_4:26724895-26724914 | Msa0846530:CDS | 45.0% | |
| TTCTTTATCGTCCGAGAGCA+GGG | + | chr5_4:26724896-26724915 | Msa0846530:CDS | 45.0% | |
| !! | ACTCAAGAAAAGGCATTCCC+TGG | + | chr5_4:26724937-26724956 | Msa0846530:CDS | 45.0% |
| GAAATTACAGACCAGGAACC+AGG | - | chr5_4:26724958-26724977 | None:intergenic | 45.0% | |
| TGAAGGCGAAATTACAGACC+AGG | - | chr5_4:26724965-26724984 | None:intergenic | 45.0% | |
| ! | TCCGCAGCGAAACATTTTTC+AGG | + | chr5_4:26724995-26725014 | Msa0846530:CDS | 45.0% |
| ! | GCACCGACAATTCACATAGA+AGG | + | chr5_4:26725050-26725069 | Msa0846530:intron | 45.0% |
| GTCTGCCCTTACAAACCAAT+TGG | + | chr5_4:26725213-26725232 | Msa0846530:CDS | 45.0% | |
| TTTGGATGTTCACCGACACT+TGG | - | chr5_4:26725297-26725316 | None:intergenic | 45.0% | |
| TCACCAATGAACATGCTAGC+AGG | - | chr5_4:26725491-26725510 | None:intergenic | 45.0% | |
| !! | ATTGGTGATGCCAATGGAGA+AGG | + | chr5_4:26725503-26725522 | Msa0846530:CDS | 45.0% |
| !! | TGAAGCACTGGTGCAAACAT+TGG | - | chr5_4:26725792-26725811 | None:intergenic | 45.0% |
| TGTTTGCACCAGTGCTTCAT+AGG | + | chr5_4:26725793-26725812 | Msa0846530:intron | 45.0% | |
| AAGGGGTTTGCACTATTCTG+TGG | + | chr5_4:26726225-26726244 | Msa0846530:intron | 45.0% | |
| AGCTAAAACGGTGTATGTCG+AGG | - | chr5_4:26726692-26726711 | None:intergenic | 45.0% | |
| CTTCGAGACCGTGTAAAGAA+TGG | + | chr5_4:26726738-26726757 | Msa0846530:CDS | 45.0% | |
| AAGCAACACAACACTTGCTC+AGG | - | chr5_4:26727261-26727280 | None:intergenic | 45.0% | |
| !!! | ATTTTAAGAAAAAATTATAT+TGG | + | chr5_4:26725912-26725931 | Msa0846530:intron | 5.0% |
| TGACCCTTGCTCTTCCCATT+TGG | - | chr5_4:26723278-26723297 | None:intergenic | 50.0% | |
| ! | TTTGGTGCAGTCACATGACC+TGG | - | chr5_4:26723812-26723831 | None:intergenic | 50.0% |
| TATGCAATCATGCCCCGATC+TGG | + | chr5_4:26723954-26723973 | Msa0846530:intron | 50.0% | |
| GCACCCTGAATCTACAAAGC+AGG | - | chr5_4:26724459-26724478 | None:intergenic | 50.0% | |
| GGAACTTGAATCCCTGCTCT+CGG | - | chr5_4:26724910-26724929 | None:intergenic | 50.0% | |
| !! | AAAAGGCATTCCCTGGTTCC+TGG | + | chr5_4:26724944-26724963 | Msa0846530:CDS | 50.0% |
| GGTTTGTAAGGGCAGACATC+TGG | - | chr5_4:26725210-26725229 | None:intergenic | 50.0% | |
| AAGGCTCAAGCCTTCTCCAT+TGG | - | chr5_4:26725516-26725535 | None:intergenic | 50.0% | |
| TAGCAATGCAGGAAACCGCG+TGG | + | chr5_4:26723376-26723395 | Msa0846530:CDS | 55.0% | |
| AGCAATGCAGGAAACCGCGT+GGG | + | chr5_4:26723377-26723396 | Msa0846530:CDS | 55.0% | |
| AATCCGCCGTAGAGTTGCCA+TGG | + | chr5_4:26723855-26723874 | Msa0846530:intron | 55.0% | |
| AAGCCATGGCAACTCTACGG+CGG | - | chr5_4:26723861-26723880 | None:intergenic | 55.0% | |
| CTGCGGAGCTTGAACACTGA+AGG | - | chr5_4:26724982-26725001 | None:intergenic | 55.0% | |
| ! | TAAGGGCAGACATCTGGAGC+AGG | - | chr5_4:26725204-26725223 | None:intergenic | 55.0% |
| ! | GGAGATCTCGCCGTGTTTTC+AGG | + | chr5_4:26725571-26725590 | Msa0846530:CDS | 55.0% |
| ! | TGTTGAGGACGCGAAAGCAC+GGG | - | chr5_4:26726105-26726124 | None:intergenic | 55.0% |
| GTGTTGAGGACGCGAAAGCA+CGG | - | chr5_4:26726106-26726125 | None:intergenic | 55.0% | |
| ! | TGGCAACTCTGGAAGCGCAG+AGG | - | chr5_4:26723345-26723364 | None:intergenic | 60.0% |
| ! | AAGGTGGTTCGGCTGCCTGT+AGG | + | chr5_4:26723441-26723460 | Msa0846530:CDS | 60.0% |
| GGCTGCCTGTAGGAGATCAG+AGG | + | chr5_4:26723451-26723470 | Msa0846530:CDS | 60.0% | |
| ATTTCCCATGGCGTTGCCGC+TGG | - | chr5_4:26724399-26724418 | None:intergenic | 60.0% | |
| ATGGCGTTGCCGCTGGCGAA+AGG | - | chr5_4:26724392-26724411 | None:intergenic | 65.0% | |
| TTTCGCCAGCGGCAACGCCA+TGG | + | chr5_4:26724391-26724410 | Msa0846530:CDS | 65.0% | |
| TTCGCCAGCGGCAACGCCAT+GGG | + | chr5_4:26724392-26724411 | Msa0846530:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 26723215 | 26727649 | 26723215 | ID=Msa0846530;Name=Msa0846530 |
| chr5_4 | mRNA | 26723215 | 26727649 | 26723215 | ID=Msa0846530-mRNA-1;Parent=Msa0846530;Name=Msa0846530-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|0.62|0.33|1|1|1|9|299|501 |
| chr5_4 | exon | 26723215 | 26723533 | 26723215 | ID=Msa0846530-mRNA-1:exon:10435;Parent=Msa0846530-mRNA-1 |
| chr5_4 | exon | 26724196 | 26724282 | 26724196 | ID=Msa0846530-mRNA-1:exon:10436;Parent=Msa0846530-mRNA-1 |
| chr5_4 | exon | 26724381 | 26724620 | 26724381 | ID=Msa0846530-mRNA-1:exon:10437;Parent=Msa0846530-mRNA-1 |
| chr5_4 | exon | 26724881 | 26725016 | 26724881 | ID=Msa0846530-mRNA-1:exon:10438;Parent=Msa0846530-mRNA-1 |
| chr5_4 | exon | 26725185 | 26725347 | 26725185 | ID=Msa0846530-mRNA-1:exon:10439;Parent=Msa0846530-mRNA-1 |
| chr5_4 | exon | 26725476 | 26725604 | 26725476 | ID=Msa0846530-mRNA-1:exon:10440;Parent=Msa0846530-mRNA-1 |
| chr5_4 | exon | 26725943 | 26726137 | 26725943 | ID=Msa0846530-mRNA-1:exon:10441;Parent=Msa0846530-mRNA-1 |
| chr5_4 | exon | 26726666 | 26726788 | 26726666 | ID=Msa0846530-mRNA-1:exon:10442;Parent=Msa0846530-mRNA-1 |
| chr5_4 | exon | 26727237 | 26727649 | 26727237 | ID=Msa0846530-mRNA-1:exon:10443;Parent=Msa0846530-mRNA-1 |
| chr5_4 | CDS | 26723215 | 26723533 | 26723215 | ID=Msa0846530-mRNA-1:cds;Parent=Msa0846530-mRNA-1 |
| chr5_4 | CDS | 26724196 | 26724282 | 26724196 | ID=Msa0846530-mRNA-1:cds;Parent=Msa0846530-mRNA-1 |
| chr5_4 | CDS | 26724381 | 26724620 | 26724381 | ID=Msa0846530-mRNA-1:cds;Parent=Msa0846530-mRNA-1 |
| chr5_4 | CDS | 26724881 | 26725016 | 26724881 | ID=Msa0846530-mRNA-1:cds;Parent=Msa0846530-mRNA-1 |
| chr5_4 | CDS | 26725185 | 26725347 | 26725185 | ID=Msa0846530-mRNA-1:cds;Parent=Msa0846530-mRNA-1 |
| chr5_4 | CDS | 26725476 | 26725604 | 26725476 | ID=Msa0846530-mRNA-1:cds;Parent=Msa0846530-mRNA-1 |
| chr5_4 | CDS | 26725943 | 26726137 | 26725943 | ID=Msa0846530-mRNA-1:cds;Parent=Msa0846530-mRNA-1 |
| chr5_4 | CDS | 26726666 | 26726788 | 26726666 | ID=Msa0846530-mRNA-1:cds;Parent=Msa0846530-mRNA-1 |
| chr5_4 | CDS | 26727237 | 26727350 | 26727237 | ID=Msa0846530-mRNA-1:cds;Parent=Msa0846530-mRNA-1 |
| chr5_4 | three_prime_UTR | 26727351 | 26727649 | 26727351 | ID=Msa0846530-mRNA-1:three_prime_utr;Parent=Msa0846530-mRNA-1 |
| Gene Sequence |
| Protein sequence |
