AlfalfaGEDB | Msa1349550

M. sativa cultivar zhongmu-4 / Msa1349550

KEGG: K02947|K09422
GO: GO:0000028 GO:0001763 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003735 GO:0005198 GO:0005488 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005840 GO:0005844 GO:0006996 GO:0007275 GO:0008150 GO:0009507 GO:0009536 GO:0009653 GO:0009888 GO:0009933 GO:0009987 GO:0010014 GO:0010016 GO:0010223 GO:0010252 GO:0010346 GO:0015935 GO:0016043 GO:0022603 GO:0022607 GO:0022613 GO:0022618 GO:0022626 GO:0022627 GO:0030312 GO:0032501 GO:0032502 GO:0032991 GO:0034622 GO:0042254 GO:0042255 GO:0042274 GO:0042592 GO:0042788 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043933 GO:0044085 GO:0044391 GO:0044422 GO:0044424 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0048367 GO:0048507 GO:0048532 GO:0048646 GO:0048731 GO:0048831 GO:0048856 GO:0048878 GO:0050789 GO:0050793 GO:0051239 GO:0060688 GO:0065003 GO:0065007 GO:0065008 GO:0070925 GO:0071826 GO:0071840 GO:0071944 GO:0090506 GO:0097159 GO:1900618 GO:1901363 GO:1905393 GO:1905428 GO:1990904 GO:2000026 GO:2000032
PFAM: PF00249.34

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1349550	XP_003611063.2	96.765	340	5	3	1	335	1	339	0.0	671

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1349550	sp\|Q8LPH6\|MYB86_ARATH	58.182	165	59	3	1	164	1	156	7.26e-63	206

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1349550	G7KC05	96.765	340	5	3	1	335	1	339	0.0	671

TFs/TRs:

Gene ID	Type	Classification
Msa1349550	TF	MYB

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0097090	Msa1349550	0.800442	1.438554e-48	-8.615850e-47
Msa1349550	Msa1353470	0.802181	6.335568e-49	-8.615850e-47
Msa0712590	Msa1349550	0.841719	4.005778e-58	-8.615850e-47
Msa0752940	Msa1349550	0.815888	7.338173e-52	-8.615850e-47
Msa0760130	Msa1349550	0.801601	8.336410e-49	-8.615850e-47
Msa0830510	Msa1349550	0.800724	1.259960e-48	-8.615850e-47
Msa0839190	Msa1349550	0.804033	2.622844e-49	-8.615850e-47
Msa0218810	Msa1349550	0.819925	8.992485e-53	-8.615850e-47
Msa0389880	Msa1349550	0.961287	1.581792e-119	-8.615850e-47
Msa0458480	Msa1349550	0.841458	4.694870e-58	-8.615850e-47
Msa1024740	Msa1349550	0.837294	5.657326e-57	-8.615850e-47
Msa1031930	Msa1349550	0.803566	3.279007e-49	-8.615850e-47
Msa1063500	Msa1349550	0.823468	1.362704e-53	-8.615850e-47
Msa1082500	Msa1349550	0.804377	2.224031e-49	-8.615850e-47
Msa0333070	Msa1349550	0.809494	1.840964e-50	-8.615850e-47
Msa1108790	Msa1349550	0.839428	1.594089e-57	-8.615850e-47
Msa1152510	Msa1349550	0.821961	3.055797e-53	-8.615850e-47
Msa0484780	Msa1349550	0.803790	2.946010e-49	-8.615850e-47
Msa0505140	Msa1349550	0.812883	3.387945e-51	-8.615850e-47
Msa0846530	Msa1349550	0.810871	9.292097e-51	-8.615850e-47
Msa0926890	Msa1349550	0.801525	8.641890e-49	-8.615850e-47
Msa0969520	Msa1349550	0.801628	8.232264e-49	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1349550	MtrunA17_Chr5g0397231	96.765	340	5	3	1	335	1	339	0.0	671
Msa1349550	MtrunA17_Chr8g0387421	62.029	345	87	15	1	333	1	313	4.69e-122	353
Msa1349550	MtrunA17_Chr8g0342521	72.180	133	36	1	1	133	1	132	3.85e-67	214
Msa1349550	MtrunA17_Chr8g0342541	78.448	116	25	0	1	116	1	116	1.19e-66	213
Msa1349550	MtrunA17_Chr2g0330041	47.368	247	90	5	1	219	1	235	2.87e-64	208
Msa1349550	MtrunA17_Chr4g0058631	52.475	202	67	4	1	178	1	197	3.48e-64	207
Msa1349550	MtrunA17_Chr1g0193371	72.269	119	33	0	1	119	1	119	2.09e-63	205
Msa1349550	MtrunA17_Chr1g0193801	71.186	118	34	0	1	118	1	118	6.92e-63	204
Msa1349550	MtrunA17_Chr7g0270891	72.034	118	33	0	1	118	1	118	4.20e-62	202
Msa1349550	MtrunA17_Chr2g0309911	74.138	116	29	1	1	116	1	115	1.87e-61	198
Msa1349550	MtrunA17_Chr8g0342481	68.148	135	40	3	1	134	1	133	2.69e-61	201
Msa1349550	MtrunA17_Chr1g0211161	62.238	143	44	1	3	145	4	136	3.76e-60	192
Msa1349550	MtrunA17_Chr3g0117091	70.339	118	35	0	1	118	1	118	1.22e-59	195
Msa1349550	MtrunA17_Chr5g0410961	55.844	154	67	1	1	154	1	153	6.63e-58	190
Msa1349550	MtrunA17_Chr7g0271241	72.477	109	30	0	1	109	1	109	1.91e-57	190
Msa1349550	MtrunA17_Chr2g0323411	45.413	218	97	4	1	218	1	196	9.66e-57	187
Msa1349550	MtrunA17_Chr1g0203411	66.387	119	40	0	1	119	1	119	2.57e-55	182
Msa1349550	MtrunA17_Chr3g0088461	67.273	110	36	0	8	117	18	127	4.54e-55	183
Msa1349550	MtrunA17_Chr4g0032401	50.556	180	71	5	11	172	16	195	1.47e-54	181
Msa1349550	MtrunA17_Chr4g0039971	58.647	133	54	1	1	133	2	133	1.27e-53	179
Msa1349550	MtrunA17_Chr2g0328771	58.696	138	53	2	12	145	20	157	3.11e-53	177
Msa1349550	MtrunA17_Chr8g0385321	65.517	116	40	0	1	116	1	116	8.95e-53	176
Msa1349550	MtrunA17_Chr6g0453471	61.864	118	45	0	1	118	1	118	9.11e-53	177
Msa1349550	MtrunA17_Chr5g0435101	63.717	113	41	0	6	118	5	117	3.34e-52	171
Msa1349550	MtrunA17_Chr4g0048511	55.479	146	57	2	1	145	1	139	4.18e-52	176
Msa1349550	MtrunA17_Chr3g0115821	60.345	116	46	0	1	116	1	116	4.35e-52	175
Msa1349550	MtrunA17_Chr3g0131121	62.069	116	44	0	1	116	1	116	1.10e-51	173
Msa1349550	MtrunA17_Chr2g0281071	63.025	119	43	1	1	118	1	119	2.03e-51	173
Msa1349550	MtrunA17_Chr1g0203441	66.055	109	37	0	11	119	12	120	2.46e-51	171
Msa1349550	MtrunA17_Chr4g0037141	61.207	116	45	0	1	116	1	116	2.76e-51	171
Msa1349550	MtrunA17_Chr3g0110351	61.864	118	45	0	1	118	1	118	1.29e-50	170
Msa1349550	MtrunA17_Chr1g0151941	61.538	117	44	1	1	116	1	117	1.75e-50	168
Msa1349550	MtrunA17_Chr7g0217741	60.169	118	47	0	1	118	1	118	2.25e-50	170
Msa1349550	MtrunA17_Chr5g0434571	61.864	118	45	0	1	118	37	154	3.10e-50	171
Msa1349550	MtrunA17_Chr7g0274581	42.995	207	102	5	1	206	1	192	6.20e-50	165
Msa1349550	MtrunA17_Chr4g0042671	56.391	133	57	1	1	133	1	132	6.61e-50	171
Msa1349550	MtrunA17_Chr4g0057031	62.712	118	44	0	1	118	1	118	7.71e-50	167
Msa1349550	MtrunA17_Chr7g0217221	61.157	121	47	0	1	121	1	121	1.23e-49	167
Msa1349550	MtrunA17_Chr5g0395281	59.524	126	50	1	8	133	8	132	1.58e-49	167
Msa1349550	MtrunA17_Chr7g0228891	62.393	117	44	0	1	117	1	117	1.85e-49	166
Msa1349550	MtrunA17_Chr4g0070611	53.623	138	64	0	1	138	1	138	1.86e-49	167
Msa1349550	MtrunA17_Chr1g0187761	58.647	133	53	1	1	131	1	133	2.51e-49	166
Msa1349550	MtrunA17_Chr8g0349261	55.102	147	63	3	1	145	1	146	3.89e-49	166
Msa1349550	MtrunA17_Chr4g0068061	61.207	116	45	0	1	116	1	116	1.00e-48	166
Msa1349550	MtrunA17_Chr8g0342531	72.340	94	26	0	1	94	1	94	1.05e-48	160
Msa1349550	MtrunA17_Chr4g0070641	53.623	138	64	0	1	138	1	138	1.28e-48	160
Msa1349550	MtrunA17_Chr7g0275911	58.974	117	48	0	1	117	1	117	1.45e-48	163
Msa1349550	MtrunA17_Chr8g0342511	77.011	87	20	0	1	87	1	87	2.86e-48	157
Msa1349550	MtrunA17_Chr6g0470971	65.138	109	38	0	11	119	13	121	3.21e-48	163
Msa1349550	MtrunA17_Chr4g0028311	51.948	154	66	2	1	153	1	147	1.09e-47	163
Msa1349550	MtrunA17_Chr3g0103281	59.483	116	47	0	1	116	1	116	5.38e-47	161
Msa1349550	MtrunA17_Chr8g0346561	52.174	138	62	1	1	138	1	134	5.75e-47	160
Msa1349550	MtrunA17_Chr4g0060721	53.191	141	62	1	1	141	2	138	5.97e-47	161
Msa1349550	MtrunA17_Chr2g0311221	62.385	109	41	0	2	110	4	112	1.09e-46	160
Msa1349550	MtrunA17_Chr2g0323351	52.593	135	62	1	7	139	7	141	1.10e-46	158
Msa1349550	MtrunA17_Chr7g0254411	59.322	118	48	0	1	118	1	118	7.42e-46	159
Msa1349550	MtrunA17_Chr3g0135311	59.829	117	46	1	1	116	1	117	8.35e-46	159
Msa1349550	MtrunA17_Chr1g0167661	53.125	128	60	0	1	128	1	128	8.83e-46	156
Msa1349550	MtrunA17_Chr7g0261281	57.759	116	49	0	1	116	1	116	1.29e-45	156
Msa1349550	MtrunA17_Chr7g0264641	58.120	117	48	1	1	116	1	117	2.25e-45	155
Msa1349550	MtrunA17_Chr1g0194951	52.174	138	66	0	1	138	1	138	2.35e-45	158
Msa1349550	MtrunA17_Chr4g0044421	57.500	120	51	0	1	120	1	120	2.66e-45	153
Msa1349550	MtrunA17_Chr1g0152011	58.120	117	48	1	1	116	1	117	3.65e-45	157
Msa1349550	MtrunA17_Chr7g0228231	57.258	124	51	1	1	122	1	124	3.72e-45	153
Msa1349550	MtrunA17_Chr4g0022931	58.036	112	47	0	5	116	6	117	4.50e-45	155
Msa1349550	MtrunA17_Chr6g0452271	37.692	260	142	5	1	259	1	241	4.55e-45	157
Msa1349550	MtrunA17_Chr2g0327351	59.459	111	44	1	1	110	1	111	4.62e-45	156
Msa1349550	MtrunA17_Chr1g0167691	57.759	116	49	0	1	116	1	116	5.05e-45	154
Msa1349550	MtrunA17_Chr8g0342461	69.474	95	28	1	1	94	1	95	6.73e-45	150
Msa1349550	MtrunA17_Chr3g0092401	58.475	118	49	0	1	118	2	119	7.14e-45	155
Msa1349550	MtrunA17_Chr5g0400821	58.120	117	48	1	1	116	1	117	7.39e-45	155
Msa1349550	MtrunA17_Chr3g0121241	58.559	111	46	0	6	116	36	146	7.65e-45	155
Msa1349550	MtrunA17_Chr8g0342471	70.652	92	26	1	1	91	1	92	2.05e-44	149
Msa1349550	MtrunA17_Chr6g0453211	61.321	106	41	0	6	111	6	111	2.52e-44	154
Msa1349550	MtrunA17_Chr4g0022911	56.757	111	48	0	5	115	6	116	9.63e-44	152
Msa1349550	MtrunA17_Chr4g0022901	57.658	111	47	0	5	115	6	116	9.70e-44	151
Msa1349550	MtrunA17_Chr4g0054391	60.000	110	43	1	1	109	1	110	5.07e-43	150
Msa1349550	MtrunA17_Chr4g0072751	59.459	111	44	1	1	110	1	111	8.72e-43	151
Msa1349550	MtrunA17_Chr6g0450101	56.667	120	50	1	1	118	1	120	8.89e-43	147
Msa1349550	MtrunA17_Chr1g0209661	57.273	110	47	0	9	118	24	133	1.43e-42	149
Msa1349550	MtrunA17_Chr6g0487491	52.672	131	53	2	1	122	1	131	8.99e-42	146
Msa1349550	MtrunA17_Chr8g0343831	56.881	109	47	0	10	118	6	114	1.86e-41	145
Msa1349550	MtrunA17_Chr7g0269831	58.621	116	48	0	1	116	1	116	4.48e-41	147
Msa1349550	MtrunA17_Chr4g0055981	59.813	107	43	0	9	115	52	158	5.22e-41	143
Msa1349550	MtrunA17_Chr5g0417821	59.048	105	43	0	12	116	7	111	9.36e-41	144
Msa1349550	MtrunA17_Chr1g0168661	52.500	120	57	0	4	123	13	132	4.97e-40	141
Msa1349550	MtrunA17_Chr3g0099131	57.944	107	45	0	12	118	41	147	5.42e-40	147
Msa1349550	MtrunA17_Chr1g0194291	54.701	117	53	0	2	118	11	127	6.40e-40	141
Msa1349550	MtrunA17_Chr4g0022881	56.075	107	47	0	8	114	8	114	1.57e-39	139
Msa1349550	MtrunA17_Chr4g0022891	55.660	106	47	0	8	113	8	113	2.06e-39	139
Msa1349550	MtrunA17_Chr8g0354661	56.604	106	46	0	12	117	37	142	3.28e-39	145
Msa1349550	MtrunA17_Chr3g0080861	56.604	106	46	0	12	117	37	142	4.85e-39	144
Msa1349550	MtrunA17_Chr1g0186061	52.101	119	57	0	5	123	13	131	5.87e-39	138
Msa1349550	MtrunA17_Chr1g0194301	55.140	107	48	0	12	118	33	139	3.64e-38	137
Msa1349550	MtrunA17_Chr7g0247131	74.324	74	19	0	44	117	10	83	5.16e-37	134
Msa1349550	MtrunA17_Chr1g0154031	55.660	106	47	0	12	117	76	181	7.78e-37	137
Msa1349550	MtrunA17_Chr4g0042611	59.091	88	36	0	1	88	1	88	5.70e-36	125
Msa1349550	MtrunA17_Chr8g0360111	55.340	103	46	0	8	110	21	123	8.71e-36	130
Msa1349550	MtrunA17_Chr7g0240821	56.000	100	44	0	17	116	6	105	2.34e-35	128
Msa1349550	MtrunA17_Chr2g0327821	45.238	126	65	1	9	134	3	124	3.31e-35	128
Msa1349550	MtrunA17_Chr4g0068921	59.223	103	42	0	12	114	24	126	3.64e-35	127
Msa1349550	MtrunA17_Chr1g0180391	47.826	115	60	0	3	117	10	124	1.15e-34	126
Msa1349550	MtrunA17_Chr2g0322521	55.660	106	47	0	12	117	29	134	1.43e-34	130
Msa1349550	MtrunA17_Chr2g0293911	57.009	107	46	0	12	118	24	130	1.87e-34	128
Msa1349550	MtrunA17_Chr7g0220341	44.681	141	74	2	8	144	21	161	2.51e-34	127
Msa1349550	MtrunA17_Chr5g0434911	49.091	110	56	0	7	116	16	125	5.12e-34	126
Msa1349550	MtrunA17_Chr5g0434931	50.476	105	52	0	12	116	35	139	1.85e-33	124
Msa1349550	MtrunA17_Chr8g0334881	49.565	115	57	1	4	117	2	116	2.17e-33	125
Msa1349550	MtrunA17_Chr4g0030881	47.009	117	55	1	6	115	1	117	2.94e-33	124
Msa1349550	MtrunA17_Chr1g0192411	41.212	165	86	3	11	171	11	168	4.25e-33	126
Msa1349550	MtrunA17_Chr5g0434831	50.476	105	52	0	12	116	7	111	4.10e-32	118
Msa1349550	MtrunA17_Chr4g0013361	49.533	107	53	1	12	117	10	116	6.50e-32	121
Msa1349550	MtrunA17_Chr7g0228991	49.533	107	54	0	10	116	27	133	9.76e-32	120
Msa1349550	MtrunA17_Chr5g0440781	49.074	108	53	2	12	118	12	118	3.31e-31	116
Msa1349550	MtrunA17_Chr2g0294811	55.682	88	39	0	1	88	1	88	3.89e-31	114
Msa1349550	MtrunA17_Chr5g0441141	45.378	119	64	1	12	129	12	130	8.38e-31	117
Msa1349550	MtrunA17_Chr5g0440761	45.763	118	63	1	13	129	13	130	9.47e-31	117
Msa1349550	MtrunA17_Chr5g0434841	47.664	107	56	0	10	116	18	124	1.32e-30	118
Msa1349550	MtrunA17_Chr5g0395221	62.338	77	29	0	12	88	12	88	1.77e-30	111
Msa1349550	MtrunA17_Chr2g0323321	54.651	86	39	0	7	92	6	91	2.29e-29	108
Msa1349550	MtrunA17_Chr5g0441131	39.474	152	85	3	12	162	9	154	5.32e-29	110
Msa1349550	MtrunA17_Chr5g0429661	39.744	156	83	4	14	169	122	266	1.90e-28	113
Msa1349550	MtrunA17_Chr5g0401731	48.696	115	56	2	3	115	2	115	3.25e-28	112
Msa1349550	MtrunA17_Chr3g0099141	50.575	87	43	0	8	94	36	122	5.79e-28	106
Msa1349550	MtrunA17_Chr4g0008551	50.476	105	50	2	11	115	36	138	8.80e-28	111
Msa1349550	MtrunA17_Chr6g0454921	51.961	102	48	1	14	115	15	115	1.10e-27	107
Msa1349550	MtrunA17_Chr4g0053431	50.980	102	49	1	14	115	5	105	3.12e-27	107
Msa1349550	MtrunA17_Chr6g0480581	45.161	124	58	3	14	134	4	120	1.14e-26	105
Msa1349550	MtrunA17_Chr4g0042501	43.802	121	62	2	2	122	98	212	7.04e-26	107
Msa1349550	MtrunA17_Chr5g0417621	45.536	112	60	1	11	122	131	241	1.36e-25	106
Msa1349550	MtrunA17_Chr6g0460661	44.860	107	56	2	17	122	19	123	3.20e-25	99.8
Msa1349550	MtrunA17_Chr3g0133601	48.182	110	54	2	8	115	29	137	6.48e-25	100
Msa1349550	MtrunA17_Chr5g0437321	44.800	125	59	3	8	128	14	132	9.58e-25	101
Msa1349550	MtrunA17_Chr7g0238631	47.573	103	53	1	14	116	113	214	1.66e-24	103
Msa1349550	MtrunA17_Chr4g0058991	43.119	109	61	1	12	120	207	314	2.55e-24	102
Msa1349550	MtrunA17_Chr3g0117511	42.478	113	62	2	14	124	183	294	2.93e-24	102
Msa1349550	MtrunA17_Chr3g0139671	46.602	103	54	1	14	116	85	186	1.62e-23	101
Msa1349550	MtrunA17_Chr3g0125801	49.074	108	52	2	14	120	16	121	2.82e-23	97.8
Msa1349550	MtrunA17_Chr7g0229101	57.143	70	30	0	44	113	4	73	3.60e-23	95.5
Msa1349550	MtrunA17_Chr1g0177901	37.313	134	83	1	25	158	5	137	5.50e-23	95.1
Msa1349550	MtrunA17_Chr7g0229131	54.167	72	33	0	45	116	5	76	5.62e-23	94.0
Msa1349550	MtrunA17_Chr1g0157731	45.631	103	55	1	14	116	91	192	1.10e-22	99.4
Msa1349550	MtrunA17_Chr7g0228531	32.353	204	112	7	12	194	218	416	4.58e-22	96.3
Msa1349550	MtrunA17_Chr5g0434901	58.462	65	27	0	46	110	7	71	6.82e-22	89.4
Msa1349550	MtrunA17_Chr6g0460671	43.119	109	61	1	14	122	99	206	1.30e-21	94.0
Msa1349550	MtrunA17_Chr6g0453751	46.154	91	40	2	12	93	20	110	3.05e-21	88.2
Msa1349550	MtrunA17_Chr3g0093811	52.055	73	35	0	44	116	14	86	3.56e-21	91.3
Msa1349550	MtrunA17_Chr5g0425591	48.780	82	41	1	13	93	10	91	5.51e-21	86.3
Msa1349550	MtrunA17_Chr5g0397841	45.098	102	54	2	8	109	105	204	8.60e-21	92.8
Msa1349550	MtrunA17_Chr7g0228401	45.545	101	51	2	25	125	290	386	1.42e-20	92.4
Msa1349550	MtrunA17_Chr7g0238651	36.290	124	77	1	14	135	7	130	1.03e-19	89.0
Msa1349550	MtrunA17_Chr7g0254261	41.026	117	63	2	1	117	81	191	1.59e-19	88.2
Msa1349550	MtrunA17_Chr7g0228481	28.856	201	123	5	12	194	218	416	2.09e-19	88.6
Msa1349550	MtrunA17_Chr7g0233061	43.000	100	48	4	14	110	180	273	3.57e-17	81.3
Msa1349550	MtrunA17_Chr5g0416341	34.862	109	70	1	17	125	29	136	3.69e-17	82.0
Msa1349550	MtrunA17_Chr1g0193901	55.000	60	26	1	10	68	9	68	2.90e-16	73.9
Msa1349550	MtrunA17_Chr1g0193891	55.000	60	26	1	10	68	9	68	2.90e-16	73.9
Msa1349550	MtrunA17_Chr1g0193871	55.000	60	26	1	10	68	9	68	2.90e-16	73.9
Msa1349550	MtrunA17_Chr1g0193881	55.000	60	26	1	10	68	9	68	2.90e-16	73.9
Msa1349550	MtrunA17_Chr8g0362231	35.398	113	70	2	17	127	25	136	1.30e-15	77.4
Msa1349550	MtrunA17_Chr3g0104491	34.211	76	46	1	53	124	1	76	9.91e-12	64.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1349550	AT1G63910.1	49.722	360	122	11	1	313	1	348	9.39e-98	294
Msa1349550	AT3G13890.2	77.586	116	26	0	1	116	1	116	6.39e-67	214
Msa1349550	AT5G26660.1	58.182	165	59	3	1	164	1	156	7.38e-64	206
Msa1349550	AT3G13890.1	72.000	125	26	1	1	116	1	125	1.12e-63	206
Msa1349550	AT4G01680.3	73.504	117	31	0	1	117	1	117	1.35e-63	202
Msa1349550	AT1G09540.1	73.729	118	31	0	1	118	1	118	3.06e-63	205
Msa1349550	AT4G01680.1	73.504	117	31	0	1	117	1	117	5.19e-63	204
Msa1349550	AT1G57560.1	71.186	118	34	0	1	118	1	118	1.40e-61	199
Msa1349550	AT1G57560.2	71.186	118	34	0	1	118	1	118	2.44e-61	197
Msa1349550	AT3G12720.1	74.138	116	29	1	1	116	12	126	3.77e-61	198
Msa1349550	AT4G01680.2	66.667	129	31	1	1	117	1	129	1.53e-59	195
Msa1349550	AT5G12870.1	66.372	113	38	0	10	122	16	128	8.25e-55	181
Msa1349550	AT3G01140.2	64.407	118	42	0	1	118	1	118	3.24e-54	181
Msa1349550	AT3G08500.1	63.559	118	40	1	3	117	18	135	1.49e-53	179
Msa1349550	AT3G02940.2	63.793	116	42	0	1	116	1	116	1.56e-53	178
Msa1349550	AT4G05100.1	63.866	119	42	1	1	118	1	119	2.47e-53	178
Msa1349550	AT3G02940.1	63.793	116	42	0	1	116	1	116	3.32e-53	178
Msa1349550	AT3G02940.3	63.793	116	42	0	1	116	1	116	3.32e-53	178
Msa1349550	AT5G16770.4	52.121	165	73	3	1	160	1	164	7.00e-53	177
Msa1349550	AT5G16770.3	52.121	165	73	3	1	160	1	164	7.00e-53	177
Msa1349550	AT5G15310.1	62.712	118	44	0	1	118	1	118	8.71e-53	177
Msa1349550	AT5G15310.4	62.712	118	44	0	1	118	1	118	1.05e-52	174
Msa1349550	AT5G15310.2	62.712	118	44	0	1	118	1	118	1.20e-52	176
Msa1349550	AT5G60890.1	61.017	118	46	0	6	123	6	123	1.30e-52	176
Msa1349550	AT5G16770.1	52.121	165	73	3	1	160	1	164	1.51e-52	176
Msa1349550	AT5G16770.2	52.121	165	73	3	1	160	1	164	1.51e-52	176
Msa1349550	AT3G01140.1	65.487	113	39	0	6	118	49	161	2.45e-52	177
Msa1349550	AT4G28110.1	62.185	119	45	0	1	119	1	119	6.34e-52	173
Msa1349550	AT4G21440.1	54.483	145	59	2	1	145	1	138	6.86e-52	175
Msa1349550	AT4G34990.1	62.931	116	43	0	1	116	1	116	1.18e-51	172
Msa1349550	AT2G16720.1	61.207	116	45	0	1	116	1	116	2.04e-51	171
Msa1349550	AT4G17785.2	63.248	117	42	1	1	116	1	117	2.90e-51	174
Msa1349550	AT4G38620.1	61.207	116	45	0	1	116	1	116	3.22e-51	171
Msa1349550	AT4G17785.1	63.248	117	42	1	1	116	1	117	4.06e-51	173
Msa1349550	AT5G65230.1	62.069	116	44	0	1	116	1	116	8.51e-51	171
Msa1349550	AT4G09460.1	59.483	116	47	0	1	116	1	116	1.52e-50	168
Msa1349550	AT1G34670.1	60.345	116	46	0	1	116	1	116	1.55e-50	172
Msa1349550	AT5G10280.1	58.621	116	48	0	1	116	1	116	2.16e-50	171
Msa1349550	AT1G22640.1	61.207	116	45	0	1	116	1	116	2.18e-50	169
Msa1349550	AT2G31180.1	40.278	216	117	2	1	204	1	216	2.22e-50	168
Msa1349550	AT1G66230.1	61.864	118	45	0	1	118	1	118	2.48e-50	169
Msa1349550	AT3G61250.1	61.207	116	45	0	1	116	1	116	2.80e-50	169
Msa1349550	AT4G12350.1	60.169	118	47	0	1	118	1	118	4.68e-50	169
Msa1349550	AT5G54230.1	63.559	118	43	0	1	118	1	118	9.06e-50	169
Msa1349550	AT3G23250.1	55.906	127	56	0	1	127	1	127	1.07e-49	167
Msa1349550	AT5G16600.1	61.017	118	46	0	1	118	1	118	1.70e-49	168
Msa1349550	AT1G06180.1	45.178	197	98	2	1	189	1	195	1.73e-49	166
Msa1349550	AT1G79180.1	58.594	128	53	0	2	129	4	131	2.37e-49	167
Msa1349550	AT1G18570.1	62.931	116	42	1	6	120	6	121	4.64e-49	168
Msa1349550	AT4G22680.1	60.169	118	47	0	1	118	1	118	8.06e-49	165
Msa1349550	AT5G49330.1	62.069	116	44	0	1	116	1	116	1.11e-48	167
Msa1349550	AT5G61420.2	59.483	116	47	0	1	116	1	116	1.14e-48	167
Msa1349550	AT5G07690.1	61.404	114	44	0	1	114	1	114	1.82e-48	166
Msa1349550	AT2G47460.1	59.524	126	47	1	1	122	1	126	5.61e-48	166
Msa1349550	AT1G35515.1	58.621	116	48	0	1	116	1	116	6.11e-48	160
Msa1349550	AT5G07700.1	59.483	116	47	0	1	116	1	116	1.70e-47	163
Msa1349550	AT5G07700.2	59.483	116	47	0	1	116	1	116	1.70e-47	163
Msa1349550	AT5G56110.1	59.483	116	47	0	1	116	1	116	1.72e-47	163
Msa1349550	AT1G08810.1	59.504	121	49	0	1	121	1	121	2.37e-47	161
Msa1349550	AT3G47600.1	59.016	122	50	0	1	122	1	122	2.48e-47	163
Msa1349550	AT5G23000.1	60.684	117	45	1	1	116	1	117	2.58e-47	162
Msa1349550	AT2G36890.1	55.882	136	51	2	1	135	1	128	9.03e-47	160
Msa1349550	AT3G62610.1	59.483	116	47	0	1	116	1	116	1.10e-46	161
Msa1349550	AT2G36890.2	55.882	136	51	2	1	135	42	169	1.33e-46	161
Msa1349550	AT1G74430.1	55.833	120	53	0	1	120	1	120	1.34e-46	159
Msa1349550	AT5G14340.1	59.829	117	47	0	1	117	13	129	1.37e-46	159
Msa1349550	AT5G62470.2	58.537	123	51	0	1	123	1	123	2.57e-46	160
Msa1349550	AT1G56160.1	60.000	115	46	0	2	116	4	118	2.88e-46	159
Msa1349550	AT1G74650.1	61.207	116	45	0	1	116	1	116	3.12e-46	160
Msa1349550	AT1G74080.1	51.799	139	61	1	6	138	6	144	4.82e-46	159
Msa1349550	AT3G27810.1	43.646	181	94	2	9	185	17	193	5.04e-46	156
Msa1349550	AT1G16490.1	57.480	127	50	1	2	128	4	126	5.54e-46	157
Msa1349550	AT5G57620.1	58.120	117	48	1	1	116	1	117	1.56e-45	158
Msa1349550	AT3G49690.1	58.974	117	47	1	1	116	1	117	2.69e-45	157
Msa1349550	AT3G28470.1	57.273	110	47	0	1	110	1	110	3.42e-45	157
Msa1349550	AT3G48920.1	57.798	109	46	0	8	116	14	122	9.83e-45	154
Msa1349550	AT3G28910.1	61.062	113	44	0	6	118	6	118	1.39e-44	155
Msa1349550	AT1G18710.1	50.000	146	63	1	1	146	1	136	1.46e-44	154
Msa1349550	AT5G62470.1	58.537	123	50	1	1	123	1	122	1.70e-44	156
Msa1349550	AT5G52260.1	52.083	144	50	1	9	133	9	152	1.72e-44	154
Msa1349550	AT4G25560.1	60.714	112	44	0	10	121	8	119	2.35e-44	154
Msa1349550	AT5G40350.1	55.556	126	54	1	11	134	16	141	3.38e-44	151
Msa1349550	AT3G13540.1	57.658	111	47	0	6	116	17	127	4.62e-44	152
Msa1349550	AT5G65790.1	57.265	117	49	1	1	116	1	117	4.74e-44	155
Msa1349550	AT5G35550.1	57.759	116	49	0	9	124	11	126	6.29e-44	152
Msa1349550	AT4G37780.1	54.032	124	56	1	1	123	1	124	1.36e-43	152
Msa1349550	AT5G62320.1	54.098	122	49	1	2	116	3	124	2.09e-43	150
Msa1349550	AT5G52600.1	57.522	113	48	0	12	124	12	124	2.88e-43	148
Msa1349550	AT3G01530.1	54.400	125	50	1	12	136	25	142	4.40e-43	148
Msa1349550	AT5G40330.1	56.481	108	47	0	9	116	9	116	5.56e-43	148
Msa1349550	AT3G12820.1	59.292	113	46	0	6	118	8	120	5.83e-43	149
Msa1349550	AT5G14750.1	57.692	104	44	0	13	116	17	120	6.66e-43	147
Msa1349550	AT3G27920.1	55.263	114	51	0	10	123	12	125	7.97e-43	148
Msa1349550	AT1G79180.2	46.584	161	53	1	2	129	4	164	9.33e-43	150
Msa1349550	AT4G13480.1	52.033	123	59	0	13	135	7	129	7.44e-41	144
Msa1349550	AT1G48000.1	48.630	146	72	2	11	154	31	175	9.61e-41	143
Msa1349550	AT2G32460.1	56.481	108	47	0	10	117	16	123	2.06e-40	148
Msa1349550	AT4G26930.1	57.944	107	45	0	12	118	19	125	2.26e-40	146
Msa1349550	AT2G32460.2	56.481	108	47	0	10	117	4	111	2.34e-40	147
Msa1349550	AT5G06100.1	58.491	106	44	0	12	117	32	137	4.94e-40	146
Msa1349550	AT3G24310.1	57.658	111	47	0	13	123	19	129	1.37e-39	140
Msa1349550	AT5G06100.5	58.491	106	44	0	12	117	32	137	1.77e-39	146
Msa1349550	AT5G06100.2	58.491	106	44	0	12	117	32	137	1.77e-39	146
Msa1349550	AT5G06100.3	58.491	106	44	0	12	117	32	137	1.77e-39	146
Msa1349550	AT5G06100.4	58.491	106	44	0	12	117	32	137	1.77e-39	146
Msa1349550	AT1G68320.1	56.881	109	47	0	10	118	17	125	2.51e-39	140
Msa1349550	AT3G30210.1	57.407	108	46	0	13	120	28	135	2.69e-39	140
Msa1349550	AT5G55020.1	55.140	107	48	0	12	118	26	132	7.23e-39	144
Msa1349550	AT3G11440.2	55.660	106	47	0	12	117	41	146	1.65e-38	142
Msa1349550	AT2G26960.1	42.384	151	73	2	9	145	17	167	3.56e-38	141
Msa1349550	AT2G47190.1	46.923	130	68	1	12	140	20	149	5.26e-38	137
Msa1349550	AT3G11440.3	52.586	116	55	0	2	117	31	146	7.54e-38	142
Msa1349550	AT3G11440.4	52.586	116	55	0	2	117	31	146	7.54e-38	142
Msa1349550	AT3G11440.1	52.586	116	55	0	2	117	31	146	7.54e-38	142
Msa1349550	AT5G26660.2	51.181	127	52	3	39	164	8	125	4.78e-37	135
Msa1349550	AT1G25340.1	45.455	143	73	2	13	154	19	157	5.79e-37	134
Msa1349550	AT3G06490.1	57.658	111	47	0	8	118	15	125	6.44e-36	132
Msa1349550	AT3G27810.2	44.138	145	73	2	45	185	4	144	4.35e-34	124
Msa1349550	AT5G59780.3	50.467	107	53	0	9	115	5	111	5.45e-34	125
Msa1349550	AT1G66370.1	45.113	133	63	1	10	132	6	138	7.10e-34	125
Msa1349550	AT5G49620.1	56.364	110	48	0	9	118	23	132	8.26e-34	126
Msa1349550	AT3G53200.1	50.467	107	53	0	9	115	6	112	9.18e-33	122
Msa1349550	AT3G46130.1	50.485	103	51	0	13	115	10	112	1.13e-32	122
Msa1349550	AT5G40350.2	59.783	92	35	1	45	134	5	96	2.32e-32	119
Msa1349550	AT3G60460.1	47.321	112	58	1	7	117	6	117	3.15e-32	122
Msa1349550	AT1G25340.2	43.357	143	71	3	13	154	19	152	5.25e-32	121
Msa1349550	AT1G25340.3	43.357	143	71	3	13	154	19	152	7.00e-32	121
Msa1349550	AT1G66380.1	52.885	104	49	0	12	115	8	111	2.66e-31	115
Msa1349550	AT3G47600.2	55.556	99	40	1	24	122	22	116	3.44e-31	120
Msa1349550	AT5G35550.2	62.500	80	30	0	45	124	50	129	1.27e-30	117
Msa1349550	AT2G26950.1	42.241	116	64	1	9	124	13	125	1.42e-30	119
Msa1349550	AT1G66390.1	51.887	106	51	0	10	115	6	111	1.62e-30	116
Msa1349550	AT1G56650.1	51.923	104	50	0	12	115	8	111	2.08e-30	116
Msa1349550	AT5G49620.2	50.000	124	48	1	9	118	23	146	2.72e-30	117
Msa1349550	AT5G14750.3	63.768	69	25	0	48	116	18	86	9.76e-29	109
Msa1349550	AT3G12820.2	67.606	71	23	0	48	118	2	72	2.20e-28	109
Msa1349550	AT3G46130.3	62.500	72	27	0	44	115	9	80	8.70e-28	108
Msa1349550	AT5G59780.2	61.644	73	28	0	43	115	18	90	9.89e-28	108
Msa1349550	AT1G69560.1	47.154	123	60	3	3	122	94	214	1.29e-27	110
Msa1349550	AT3G46130.4	61.644	73	28	0	43	115	18	90	1.82e-27	108
Msa1349550	AT1G69560.2	47.154	123	60	3	3	122	110	230	1.85e-27	110
Msa1349550	AT3G27785.1	42.241	116	66	1	12	127	187	301	4.55e-26	108
Msa1349550	AT5G58850.1	44.828	116	59	2	14	125	105	219	5.08e-26	107
Msa1349550	AT5G11050.1	36.943	157	92	3	10	160	101	256	8.30e-26	107
Msa1349550	AT1G26780.1	47.321	112	56	2	12	122	96	205	2.05e-25	103
Msa1349550	AT3G53200.2	58.904	73	30	0	43	115	7	79	2.05e-25	101
Msa1349550	AT1G26780.2	47.321	112	56	2	12	122	96	205	2.44e-25	105
Msa1349550	AT5G40360.1	31.609	174	113	4	12	180	156	328	2.81e-25	104
Msa1349550	AT1G17950.1	45.045	111	60	1	14	124	5	114	1.15e-24	100
Msa1349550	AT3G50060.1	43.200	125	68	2	14	138	6	127	1.17e-24	102
Msa1349550	AT4G18770.1	42.241	116	64	2	14	127	217	331	1.76e-24	103
Msa1349550	AT4G37260.1	49.074	108	53	2	8	115	8	113	2.03e-24	101
Msa1349550	AT5G02320.1	48.544	103	52	1	14	116	127	228	2.85e-24	103
Msa1349550	AT5G02320.2	48.544	103	52	1	14	116	127	228	2.85e-24	103
Msa1349550	AT2G39880.1	48.598	107	53	2	9	115	46	150	3.96e-24	101
Msa1349550	AT5G02320.3	48.544	103	52	1	14	116	67	168	4.06e-24	103
Msa1349550	AT5G67300.1	48.039	102	52	1	14	115	6	106	5.78e-24	100
Msa1349550	AT2G23290.1	50.980	102	49	1	14	115	13	113	6.89e-24	100
Msa1349550	AT3G55730.1	49.533	107	52	2	9	115	52	156	1.04e-23	100
Msa1349550	AT3G29020.1	42.202	109	62	1	14	122	65	172	2.96e-23	96.7
Msa1349550	AT3G09370.2	48.039	102	52	1	14	115	135	235	3.64e-23	100
Msa1349550	AT3G09370.1	48.039	102	52	1	14	115	130	230	3.88e-23	100
Msa1349550	AT3G29020.2	42.202	109	62	1	14	122	67	174	4.19e-23	97.8
Msa1349550	AT3G09370.3	48.039	102	52	1	14	115	143	243	4.72e-23	100
Msa1349550	AT3G09230.1	46.602	103	54	1	14	116	55	156	6.03e-23	98.6
Msa1349550	AT1G66380.3	59.155	71	29	0	45	115	8	78	6.68e-23	92.0
Msa1349550	AT4G33450.1	38.686	137	80	2	13	149	18	150	9.62e-23	95.5
Msa1349550	AT5G11510.3	38.621	145	81	3	14	158	81	217	1.33e-22	99.4
Msa1349550	AT5G11510.1	38.621	145	81	3	14	158	81	217	1.33e-22	99.4
Msa1349550	AT5G11510.4	38.621	145	81	3	14	158	81	217	1.33e-22	99.4
Msa1349550	AT5G11510.5	44.545	110	60	1	14	123	81	189	1.45e-22	99.0
Msa1349550	AT5G11510.2	44.545	110	60	1	14	123	81	189	1.56e-22	99.0
Msa1349550	AT1G22640.3	66.102	59	20	0	58	116	1	59	2.89e-22	93.2
Msa1349550	AT1G73410.1	45.794	107	57	1	14	120	6	111	3.84e-22	94.0
Msa1349550	AT3G23250.2	57.143	70	30	0	58	127	1	70	3.88e-22	93.6
Msa1349550	AT5G17800.1	41.176	119	69	1	1	119	80	197	4.64e-22	95.1
Msa1349550	AT1G73410.2	45.370	108	58	1	14	121	6	112	1.04e-21	91.7
Msa1349550	AT4G32730.5	44.660	103	56	1	14	116	87	188	1.08e-21	96.7
Msa1349550	AT4G32730.4	44.660	103	56	1	14	116	87	188	1.08e-21	96.7
Msa1349550	AT4G32730.3	44.660	103	56	1	14	116	87	188	1.08e-21	96.7
Msa1349550	AT4G32730.2	44.660	103	56	1	14	116	87	188	1.08e-21	96.7
Msa1349550	AT4G32730.1	44.660	103	56	1	14	116	87	188	1.44e-21	96.3
Msa1349550	AT1G18960.1	43.137	102	51	4	17	116	13	109	2.06e-21	93.2
Msa1349550	AT5G14750.4	57.627	59	25	0	58	116	1	59	7.44e-20	85.1
Msa1349550	AT5G14750.2	57.627	59	25	0	58	116	1	59	7.44e-20	85.1
Msa1349550	AT1G66380.2	41.584	101	58	1	8	107	4	104	1.09e-19	83.6
Msa1349550	AT2G25230.1	37.615	109	66	2	17	125	29	135	1.62e-19	86.7
Msa1349550	AT1G71030.2	48.529	68	35	0	51	118	5	72	2.34e-19	84.7
Msa1349550	AT1G71030.1	48.529	68	35	0	51	118	19	86	2.92e-19	84.7
Msa1349550	AT2G02820.3	36.697	109	68	1	17	125	33	140	7.06e-19	86.3
Msa1349550	AT2G02820.1	36.697	109	68	1	17	125	33	140	7.80e-19	87.4
Msa1349550	AT2G02820.2	36.697	109	68	1	17	125	33	140	1.21e-18	87.0
Msa1349550	AT2G37630.1	36.434	129	78	2	14	140	4	130	3.87e-18	84.7
Msa1349550	AT5G39700.1	38.596	114	69	1	9	122	51	163	3.98e-18	81.6
Msa1349550	AT1G14350.2	40.594	101	59	1	17	117	28	127	7.13e-18	84.3
Msa1349550	AT1G14350.1	40.594	101	59	1	17	117	28	127	7.13e-18	84.3
Msa1349550	AT4G00540.2	40.741	108	60	2	12	116	101	207	3.91e-17	82.0
Msa1349550	AT4G00540.1	40.741	108	60	2	12	116	99	205	6.70e-17	81.6
Msa1349550	AT5G40430.1	32.456	114	74	3	12	125	52	162	4.94e-15	74.3
Msa1349550	AT5G59780.1	57.143	49	21	0	70	118	1	49	2.40e-13	67.8
Msa1349550	AT3G46130.2	57.143	49	21	0	70	118	1	49	4.43e-13	67.4
Msa1349550	AT4G25560.2	58.824	51	21	0	71	121	3	53	7.33e-13	67.4
Msa1349550	AT3G28910.2	61.905	42	16	0	77	118	1	42	2.03e-11	63.5
Msa1349550	AT1G14350.3	43.548	62	35	0	56	117	23	84	2.35e-11	64.7
Msa1349550	AT1G14350.4	43.548	62	35	0	56	117	23	84	2.35e-11	64.7
Msa1349550	AT1G74650.3	65.000	40	14	0	77	116	1	40	2.73e-11	63.5

Find 78 sgRNAs with CRISPR-Local

Find 242 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TGAGATGGATAAATTATTTA+AGG	0.204522	tig0010967:+10507	Msa1349550:CDS
GTAATTATCTAGTTGATTAA+TGG	0.205543	tig0010967:-11298	None:intergenic
AGGACATGTTGATGAAAATA+AGG	0.261958	tig0010967:-11355	None:intergenic
GGAAAAGGAGAAAGTGAATT+AGG	0.280326	tig0010967:-11837	None:intergenic
ATAGTTGGTGTTGATAAATT+AGG	0.292324	tig0010967:-11237	None:intergenic
CTACTCATGGTTATGGTTGC+TGG	0.308659	tig0010967:+10338	Msa1349550:CDS
ATGAGTTTCTCATCTTCTTC+AGG	0.319747	tig0010967:-10304	None:intergenic
TCAAGTGCAATCTTGTAATA+TGG	0.345859	tig0010967:+11638	Msa1349550:CDS
AAAAGATGTATTCGATCATT+TGG	0.349983	tig0010967:+12156	Msa1349550:three_prime_UTR
AACCTTCCTCTTCTAATATC+AGG	0.359507	tig0010967:-10530	None:intergenic
TCATGATGGAATAGTACTTC+TGG	0.368020	tig0010967:-11441	None:intergenic
TACATTACTACTCATGGTTA+TGG	0.370666	tig0010967:+10331	Msa1349550:CDS
CAAATAACCTTTCCTTCTAC+AGG	0.382480	tig0010967:-12112	None:intergenic
TTCATGGGGTTGTTGGCAAC+AGG	0.386838	tig0010967:+10585	Msa1349550:CDS
GTAGCAAGCTCTTCCTAGTT+AGG	0.390166	tig0010967:-11926	None:intergenic
AAAGGTGTGGTAAAAGTTGT+AGG	0.396739	tig0010967:+10483	Msa1349550:CDS
AAGTTAATTATAAGCCTTCA+TGG	0.404335	tig0010967:+10569	Msa1349550:CDS
GGTACCAAACTCATCACATA+TGG	0.406647	tig0010967:+11809	Msa1349550:CDS
TCCACATTATTCTCTATCAA+TGG	0.410595	tig0010967:-11594	None:intergenic
GGAGAGTGTTGAAGGACAAA+TGG	0.424251	tig0010967:+11767	Msa1349550:CDS
ATAATTAACTTCTCCTCCTC+AGG	0.429297	tig0010967:-10557	None:intergenic
ATAAGCCTTCATGGGGTTGT+TGG	0.433560	tig0010967:+10578	Msa1349550:CDS
AGGAGGAGAGTTATTAACAT+TGG	0.435772	tig0010967:+11668	Msa1349550:CDS
CCATGATCATCATCAAGTTC+AGG	0.438689	tig0010967:+11503	Msa1349550:CDS
TTCAGCTGGGAGAGTGTTGA+AGG	0.456330	tig0010967:+11759	Msa1349550:CDS
AAGAGACACAAATGTTGAAA+AGG	0.464207	tig0010967:-12231	None:intergenic
AGGCGATTGAAACCTGTAGA+AGG	0.468057	tig0010967:+12100	Msa1349550:three_prime_UTR
GACAAGAAGAGTTGAATGAA+TGG	0.469944	tig0010967:+11703	Msa1349550:CDS
CTTGTGTCAAACATAAATAA+AGG	0.479629	tig0010967:-11375	None:intergenic
AAGTGCAGACCAGCTTTCTC+AGG	0.484684	tig0010967:-10370	None:intergenic
TTATCTCATAATAGTGAAGA+AGG	0.486146	tig0010967:-11858	None:intergenic
GTTCCCATATGTGATGAGTT+TGG	0.488784	tig0010967:-11813	None:intergenic
TCTGTTGATTGCAGCATGAA+TGG	0.499140	tig0010967:-10258	None:intergenic
AGTTAATTATAAGCCTTCAT+GGG	0.499739	tig0010967:+10570	Msa1349550:CDS
ATTTCATTGTCTGTTCTACC+AGG	0.510091	tig0010967:-11156	None:intergenic
AAAGCTATTGCAGCTGGATG+AGG	0.510638	tig0010967:-11534	None:intergenic
ATTAGATACATTACTACTCA+TGG	0.516384	tig0010967:+10325	Msa1349550:CDS
GGGAGGTGAAGAACAAGTAC+TGG	0.518630	tig0010967:+11788	Msa1349550:CDS
AGAAGGTTAAGAGAGGCCTT+TGG	0.525448	tig0010967:+10278	Msa1349550:CDS
GTTGTAAAAGCTATTGCAGC+TGG	0.529157	tig0010967:-11540	None:intergenic
CACATTGCAAGTCACTTGCC+TGG	0.531644	tig0010967:+11138	Msa1349550:CDS
CATAATAGTGAAGAAGGAAA+AGG	0.531961	tig0010967:-11852	None:intergenic
ACAAGAAGAGTTGAATGAAT+GGG	0.537109	tig0010967:+11704	Msa1349550:CDS
GCTATTGCAGCTGGATGAGG+AGG	0.542899	tig0010967:-11531	None:intergenic
GTAATAACTAGAGAGAAAGA+TGG	0.543659	tig0010967:+10231	Msa1349550:exon
GAGAGTGTTGAAGGACAAAT+GGG	0.544217	tig0010967:+11768	Msa1349550:CDS
GTAAAAGTTGTAGGTTGAGA+TGG	0.544435	tig0010967:+10492	Msa1349550:CDS
TTAATTATATCTACCTAACT+AGG	0.549785	tig0010967:+11913	Msa1349550:three_prime_UTR
CATCTTCTTCAGGTGACCAA+AGG	0.550800	tig0010967:-10294	None:intergenic
ACATTATTCTCTATCAATGG+TGG	0.555492	tig0010967:-11591	None:intergenic
GCAATCTTGTAATATGGATG+AGG	0.555592	tig0010967:+11644	Msa1349550:CDS
AGTGAAGTTCCTGAGAAAGC+TGG	0.559248	tig0010967:+10361	Msa1349550:CDS
TAATAACTAGAGAGAAAGAT+GGG	0.568512	tig0010967:+10232	Msa1349550:exon
TCAAACTCACAGTATCATGA+TGG	0.573341	tig0010967:-11455	None:intergenic
TGTAATATGGATGAGGAAGG+AGG	0.573816	tig0010967:+11651	Msa1349550:CDS
GTACCAAACTCATCACATAT+GGG	0.577270	tig0010967:+11810	Msa1349550:CDS
GTTAATTATAAGCCTTCATG+GGG	0.585238	tig0010967:+10571	Msa1349550:CDS
AAGAGGAAGGTTTACACCTG+AGG	0.591737	tig0010967:+10541	Msa1349550:CDS
CCTGAACTTGATGATGATCA+TGG	0.595567	tig0010967:-11503	None:intergenic
TGATGATGATGATCAATAGT+TGG	0.596624	tig0010967:-11252	None:intergenic
ATTGAAACCTGTAGAAGGAA+AGG	0.599497	tig0010967:+12105	Msa1349550:three_prime_UTR
TTAAGGCCTGATATTAGAAG+AGG	0.608039	tig0010967:+10524	Msa1349550:CDS
TGTTGCCAACAACCCCATGA+AGG	0.617109	tig0010967:-10583	None:intergenic
TCCCAGCTGAAAATAAAGCT+AGG	0.619685	tig0010967:-11747	None:intergenic
TCTTGTAATATGGATGAGGA+AGG	0.621073	tig0010967:+11648	Msa1349550:CDS
AGGAAGGTTTACACCTGAGG+AGG	0.624953	tig0010967:+10544	Msa1349550:CDS
AGAAGAGTTGAATGAATGGG+TGG	0.627654	tig0010967:+11707	Msa1349550:CDS
ACCATTGATAGAGAATAATG+TGG	0.633578	tig0010967:+11593	Msa1349550:CDS
GAATAATGTGGAAAACAGCA+TGG	0.636117	tig0010967:+11605	Msa1349550:CDS
TTCATGCTGCAATCAACAGA+AGG	0.642237	tig0010967:+10261	Msa1349550:CDS
GGCCTGATATTAGAAGAGGA+AGG	0.643800	tig0010967:+10528	Msa1349550:CDS
TATTTGACTGTACAAAGTGG+TGG	0.654421	tig0010967:+12179	Msa1349550:three_prime_UTR
AGTGTTGAAGGACAAATGGG+AGG	0.655479	tig0010967:+11771	Msa1349550:CDS
TGAGTTTGAGTTCTGACACA+TGG	0.664515	tig0010967:+11469	Msa1349550:CDS
GAACTGTAATTGATCAACTG+AGG	0.702739	tig0010967:-11276	None:intergenic
AATCAACAGAAGGTTAAGAG+AGG	0.703939	tig0010967:+10271	Msa1349550:CDS
TGGTATTTGACTGTACAAAG+TGG	0.732730	tig0010967:+12176	Msa1349550:three_prime_UTR
GTATATGTATATGTATAACG+AGG	0.736573	tig0010967:+12014	Msa1349550:three_prime_UTR

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTCTATATATTTTGTTTTTC+AGG	+	tig0010967:10455-10474	Msa1349550:intron	15.0%
!!!	TCTATATATTTTGTTTTTCA+GGG	+	tig0010967:10456-10475	Msa1349550:intron	15.0%
!!	ACAATGAAATAAAAAACTAT+TGG	+	tig0010967:11169-11188	Msa1349550:CDS	15.0%
!!	AGAAAGAGAAAAAAAAATAA+AGG	+	tig0010967:12080-12099	Msa1349550:three_prime_UTR	15.0%
!!!	TTTTTCTTGAATGATAATAA+TGG	+	tig0010967:12203-12222	Msa1349550:three_prime_UTR	15.0%
!!!	TTTTCTTGAATGATAATAAT+GGG	+	tig0010967:12204-12223	Msa1349550:three_prime_UTR	15.0%
!!!	TTCTATATATTTTGTTTTTC+AGG	+	tig0010967:10455-10474	Msa1349550:intron	15.0%
!!!	TCTATATATTTTGTTTTTCA+GGG	+	tig0010967:10456-10475	Msa1349550:intron	15.0%
!!	ACAATGAAATAAAAAACTAT+TGG	+	tig0010967:11169-11188	Msa1349550:CDS	15.0%
!!	AGAAAGAGAAAAAAAAATAA+AGG	+	tig0010967:12080-12099	Msa1349550:three_prime_UTR	15.0%
!!!	TTTTTCTTGAATGATAATAA+TGG	+	tig0010967:12203-12222	Msa1349550:three_prime_UTR	15.0%
!!!	TTTTCTTGAATGATAATAAT+GGG	+	tig0010967:12204-12223	Msa1349550:three_prime_UTR	15.0%
!!	TGAGATGGATAAATTATTTA+AGG	+	tig0010967:10507-10526	Msa1349550:CDS	20.0%
!!	AATGATTCAAATTGCTTAAT+TGG	-	tig0010967:10643-10662	None:intergenic	20.0%
!!	TTTATTCCAGATTTATCAAA+GGG	-	tig0010967:10704-10723	None:intergenic	20.0%
!!	ATTTATTCCAGATTTATCAA+AGG	-	tig0010967:10705-10724	None:intergenic	20.0%
!!	ATCAATATTAGGTAAAGAAA+AGG	+	tig0010967:10738-10757	Msa1349550:intron	20.0%
!!	ATTTATTAATGAAGCAATCT+TGG	+	tig0010967:10850-10869	Msa1349550:intron	20.0%
!!	AAATGTATGCTTATAAATCA+CGG	+	tig0010967:11026-11045	Msa1349550:intron	20.0%
!!	TAAAAAACTATTGGAATTCA+TGG	+	tig0010967:11178-11197	Msa1349550:CDS	20.0%
!!	GTAATTATCTAGTTGATTAA+TGG	-	tig0010967:11301-11320	None:intergenic	20.0%
!!	TTAATTATATCTACCTAACT+AGG	+	tig0010967:11913-11932	Msa1349550:three_prime_UTR	20.0%
!!	TGAGATGGATAAATTATTTA+AGG	+	tig0010967:10507-10526	Msa1349550:CDS	20.0%
!!	AATGATTCAAATTGCTTAAT+TGG	-	tig0010967:10643-10662	None:intergenic	20.0%
!!	TTTATTCCAGATTTATCAAA+GGG	-	tig0010967:10704-10723	None:intergenic	20.0%
!!	ATTTATTCCAGATTTATCAA+AGG	-	tig0010967:10705-10724	None:intergenic	20.0%
!!	ATCAATATTAGGTAAAGAAA+AGG	+	tig0010967:10738-10757	Msa1349550:intron	20.0%
!!	ATTTATTAATGAAGCAATCT+TGG	+	tig0010967:10850-10869	Msa1349550:intron	20.0%
!!	AAATGTATGCTTATAAATCA+CGG	+	tig0010967:11026-11045	Msa1349550:intron	20.0%
!!	TAAAAAACTATTGGAATTCA+TGG	+	tig0010967:11178-11197	Msa1349550:CDS	20.0%
!!	GTAATTATCTAGTTGATTAA+TGG	-	tig0010967:11301-11320	None:intergenic	20.0%
!!	TTAATTATATCTACCTAACT+AGG	+	tig0010967:11913-11932	Msa1349550:three_prime_UTR	20.0%
!	TTTACTAAAGAAAAAGAGAC+AGG	+	tig0010967:10189-10208	Msa1349550:five_prime_UTR	25.0%
!	TAATAACTAGAGAGAAAGAT+GGG	+	tig0010967:10232-10251	Msa1349550:exon	25.0%
!	ATTAGATACATTACTACTCA+TGG	+	tig0010967:10325-10344	Msa1349550:CDS	25.0%
!	AAGTTAATTATAAGCCTTCA+TGG	+	tig0010967:10569-10588	Msa1349550:CDS	25.0%
!	AGTTAATTATAAGCCTTCAT+GGG	+	tig0010967:10570-10589	Msa1349550:CDS	25.0%
!	AAATCCATATTACACAACAA+GGG	-	tig0010967:10666-10685	None:intergenic	25.0%
!	AAAATCCATATTACACAACA+AGG	-	tig0010967:10667-10686	None:intergenic	25.0%
!!	TGTTGTGTAATATGGATTTT+TGG	+	tig0010967:10667-10686	Msa1349550:intron	25.0%
!!!	AAAAGCATCGTATCAATATT+AGG	+	tig0010967:10727-10746	Msa1349550:intron	25.0%
!!!	AATTTTGTTGGTTGTGAAAA+AGG	-	tig0010967:10988-11007	None:intergenic	25.0%
!!	AAACATGACTAGAATTTTGT+TGG	-	tig0010967:11000-11019	None:intergenic	25.0%
!	TCATATATATACAATGCAGA+TGG	+	tig0010967:11112-11131	Msa1349550:intron	25.0%
!	CATATATATACAATGCAGAT+GGG	+	tig0010967:11113-11132	Msa1349550:intron	25.0%
!!!	ATAGTTGGTGTTGATAAATT+AGG	-	tig0010967:11240-11259	None:intergenic	25.0%
!!!	CTTTTGTTGTTACATTTTCT+TGG	-	tig0010967:11332-11351	None:intergenic	25.0%
!	CTTGTGTCAAACATAAATAA+AGG	-	tig0010967:11378-11397	None:intergenic	25.0%
!	TTATCTCATAATAGTGAAGA+AGG	-	tig0010967:11861-11880	None:intergenic	25.0%
!	GTATATGTATATGTATAACG+AGG	+	tig0010967:12014-12033	Msa1349550:three_prime_UTR	25.0%
!	AAAAGATGTATTCGATCATT+TGG	+	tig0010967:12156-12175	Msa1349550:three_prime_UTR	25.0%
!	TTTACTAAAGAAAAAGAGAC+AGG	+	tig0010967:10189-10208	Msa1349550:five_prime_UTR	25.0%
!	TAATAACTAGAGAGAAAGAT+GGG	+	tig0010967:10232-10251	Msa1349550:exon	25.0%
!	ATTAGATACATTACTACTCA+TGG	+	tig0010967:10325-10344	Msa1349550:CDS	25.0%
!	AAGTTAATTATAAGCCTTCA+TGG	+	tig0010967:10569-10588	Msa1349550:CDS	25.0%
!	AGTTAATTATAAGCCTTCAT+GGG	+	tig0010967:10570-10589	Msa1349550:CDS	25.0%
!	AAATCCATATTACACAACAA+GGG	-	tig0010967:10666-10685	None:intergenic	25.0%
!	AAAATCCATATTACACAACA+AGG	-	tig0010967:10667-10686	None:intergenic	25.0%
!!	TGTTGTGTAATATGGATTTT+TGG	+	tig0010967:10667-10686	Msa1349550:intron	25.0%
!!!	AAAAGCATCGTATCAATATT+AGG	+	tig0010967:10727-10746	Msa1349550:intron	25.0%
!!!	AATTTTGTTGGTTGTGAAAA+AGG	-	tig0010967:10988-11007	None:intergenic	25.0%
!!	AAACATGACTAGAATTTTGT+TGG	-	tig0010967:11000-11019	None:intergenic	25.0%
!	TCATATATATACAATGCAGA+TGG	+	tig0010967:11112-11131	Msa1349550:intron	25.0%
!	CATATATATACAATGCAGAT+GGG	+	tig0010967:11113-11132	Msa1349550:intron	25.0%
!!!	ATAGTTGGTGTTGATAAATT+AGG	-	tig0010967:11240-11259	None:intergenic	25.0%
!!!	CTTTTGTTGTTACATTTTCT+TGG	-	tig0010967:11332-11351	None:intergenic	25.0%
!	CTTGTGTCAAACATAAATAA+AGG	-	tig0010967:11378-11397	None:intergenic	25.0%
!	TTATCTCATAATAGTGAAGA+AGG	-	tig0010967:11861-11880	None:intergenic	25.0%
!	GTATATGTATATGTATAACG+AGG	+	tig0010967:12014-12033	Msa1349550:three_prime_UTR	25.0%
!	AAAAGATGTATTCGATCATT+TGG	+	tig0010967:12156-12175	Msa1349550:three_prime_UTR	25.0%
	GTAATAACTAGAGAGAAAGA+TGG	+	tig0010967:10231-10250	Msa1349550:exon	30.0%
	TACATTACTACTCATGGTTA+TGG	+	tig0010967:10331-10350	Msa1349550:CDS	30.0%
	GTTAATTATAAGCCTTCATG+GGG	+	tig0010967:10571-10590	Msa1349550:CDS	30.0%
	ATGAAACCCTTTGATAAATC+TGG	+	tig0010967:10695-10714	Msa1349550:intron	30.0%
	TTAAGCTATATCATGTAGCT+AGG	-	tig0010967:10799-10818	None:intergenic	30.0%
	TGCTAAACAAACACTGAAAA+CGG	-	tig0010967:10960-10979	None:intergenic	30.0%
!	TGATGATGATGATCAATAGT+TGG	-	tig0010967:11255-11274	None:intergenic	30.0%
!	TGTTGTTACATTTTCTTGGT+TGG	-	tig0010967:11328-11347	None:intergenic	30.0%
!	AGGACATGTTGATGAAAATA+AGG	-	tig0010967:11358-11377	None:intergenic	30.0%
	ACATTATTCTCTATCAATGG+TGG	-	tig0010967:11594-11613	None:intergenic	30.0%
	ACCATTGATAGAGAATAATG+TGG	+	tig0010967:11593-11612	Msa1349550:CDS	30.0%
	TCCACATTATTCTCTATCAA+TGG	-	tig0010967:11597-11616	None:intergenic	30.0%
	TCAAGTGCAATCTTGTAATA+TGG	+	tig0010967:11638-11657	Msa1349550:CDS	30.0%
	ACAAGAAGAGTTGAATGAAT+GGG	+	tig0010967:11704-11723	Msa1349550:CDS	30.0%
	CATAATAGTGAAGAAGGAAA+AGG	-	tig0010967:11855-11874	None:intergenic	30.0%
	ATCAGCAATCAAAAAAAGTG+TGG	-	tig0010967:11968-11987	None:intergenic	30.0%
!!!	CACTTTTTTTGATTGCTGAT+TGG	+	tig0010967:11968-11987	Msa1349550:three_prime_UTR	30.0%
!!!	TTTTGTTGAGTGTTTTGACA+AGG	+	tig0010967:12046-12065	Msa1349550:three_prime_UTR	30.0%
	GTAATAACTAGAGAGAAAGA+TGG	+	tig0010967:10231-10250	Msa1349550:exon	30.0%
	TACATTACTACTCATGGTTA+TGG	+	tig0010967:10331-10350	Msa1349550:CDS	30.0%
	GTTAATTATAAGCCTTCATG+GGG	+	tig0010967:10571-10590	Msa1349550:CDS	30.0%
	ATGAAACCCTTTGATAAATC+TGG	+	tig0010967:10695-10714	Msa1349550:intron	30.0%
	TTAAGCTATATCATGTAGCT+AGG	-	tig0010967:10799-10818	None:intergenic	30.0%
	TGCTAAACAAACACTGAAAA+CGG	-	tig0010967:10960-10979	None:intergenic	30.0%
!	TGATGATGATGATCAATAGT+TGG	-	tig0010967:11255-11274	None:intergenic	30.0%
!	TGTTGTTACATTTTCTTGGT+TGG	-	tig0010967:11328-11347	None:intergenic	30.0%
!	AGGACATGTTGATGAAAATA+AGG	-	tig0010967:11358-11377	None:intergenic	30.0%
	ACATTATTCTCTATCAATGG+TGG	-	tig0010967:11594-11613	None:intergenic	30.0%
	ACCATTGATAGAGAATAATG+TGG	+	tig0010967:11593-11612	Msa1349550:CDS	30.0%
	TCCACATTATTCTCTATCAA+TGG	-	tig0010967:11597-11616	None:intergenic	30.0%
	TCAAGTGCAATCTTGTAATA+TGG	+	tig0010967:11638-11657	Msa1349550:CDS	30.0%
	ACAAGAAGAGTTGAATGAAT+GGG	+	tig0010967:11704-11723	Msa1349550:CDS	30.0%
	CATAATAGTGAAGAAGGAAA+AGG	-	tig0010967:11855-11874	None:intergenic	30.0%
	ATCAGCAATCAAAAAAAGTG+TGG	-	tig0010967:11968-11987	None:intergenic	30.0%
!!!	CACTTTTTTTGATTGCTGAT+TGG	+	tig0010967:11968-11987	Msa1349550:three_prime_UTR	30.0%
!!!	TTTTGTTGAGTGTTTTGACA+AGG	+	tig0010967:12046-12065	Msa1349550:three_prime_UTR	30.0%
	AATCAACAGAAGGTTAAGAG+AGG	+	tig0010967:10271-10290	Msa1349550:CDS	35.0%
	ATGAGTTTCTCATCTTCTTC+AGG	-	tig0010967:10307-10326	None:intergenic	35.0%
!!!	TTTGTTTTTCAGGGCTTCAA+AGG	+	tig0010967:10465-10484	Msa1349550:intron	35.0%
!	AAAGGTGTGGTAAAAGTTGT+AGG	+	tig0010967:10483-10502	Msa1349550:CDS	35.0%
!	GTAAAAGTTGTAGGTTGAGA+TGG	+	tig0010967:10492-10511	Msa1349550:CDS	35.0%
	TTAAGGCCTGATATTAGAAG+AGG	+	tig0010967:10524-10543	Msa1349550:CDS	35.0%
	AACCTTCCTCTTCTAATATC+AGG	-	tig0010967:10533-10552	None:intergenic	35.0%
	ATAATTAACTTCTCCTCCTC+AGG	-	tig0010967:10560-10579	None:intergenic	35.0%
!	CATTCCCTTGTTGTGTAATA+TGG	+	tig0010967:10659-10678	Msa1349550:intron	35.0%
	AGCAATCTTGGTATGTATGA+AGG	+	tig0010967:10862-10881	Msa1349550:intron	35.0%
	ATTTCATTGTCTGTTCTACC+AGG	-	tig0010967:11159-11178	None:intergenic	35.0%
	GAACTGTAATTGATCAACTG+AGG	-	tig0010967:11279-11298	None:intergenic	35.0%
!	TCATGATGGAATAGTACTTC+TGG	-	tig0010967:11444-11463	None:intergenic	35.0%
	TCAAACTCACAGTATCATGA+TGG	-	tig0010967:11458-11477	None:intergenic	35.0%
	GAATAATGTGGAAAACAGCA+TGG	+	tig0010967:11605-11624	Msa1349550:CDS	35.0%
	GCAATCTTGTAATATGGATG+AGG	+	tig0010967:11644-11663	Msa1349550:CDS	35.0%
	TCTTGTAATATGGATGAGGA+AGG	+	tig0010967:11648-11667	Msa1349550:CDS	35.0%
	AGGAGGAGAGTTATTAACAT+TGG	+	tig0010967:11668-11687	Msa1349550:CDS	35.0%
	GACAAGAAGAGTTGAATGAA+TGG	+	tig0010967:11703-11722	Msa1349550:CDS	35.0%
!!!	TCCTAGCTTTATTTTCAGCT+GGG	+	tig0010967:11746-11765	Msa1349550:CDS	35.0%
	GTACCAAACTCATCACATAT+GGG	+	tig0010967:11810-11829	Msa1349550:CDS	35.0%
	GGAAAAGGAGAAAGTGAATT+AGG	-	tig0010967:11840-11859	None:intergenic	35.0%
	ATTGAAACCTGTAGAAGGAA+AGG	+	tig0010967:12105-12124	Msa1349550:three_prime_UTR	35.0%
	CAAATAACCTTTCCTTCTAC+AGG	-	tig0010967:12115-12134	None:intergenic	35.0%
	TGGTATTTGACTGTACAAAG+TGG	+	tig0010967:12176-12195	Msa1349550:three_prime_UTR	35.0%
	TATTTGACTGTACAAAGTGG+TGG	+	tig0010967:12179-12198	Msa1349550:three_prime_UTR	35.0%
	AATCAACAGAAGGTTAAGAG+AGG	+	tig0010967:10271-10290	Msa1349550:CDS	35.0%
	ATGAGTTTCTCATCTTCTTC+AGG	-	tig0010967:10307-10326	None:intergenic	35.0%
!!!	TTTGTTTTTCAGGGCTTCAA+AGG	+	tig0010967:10465-10484	Msa1349550:intron	35.0%
!	AAAGGTGTGGTAAAAGTTGT+AGG	+	tig0010967:10483-10502	Msa1349550:CDS	35.0%
!	GTAAAAGTTGTAGGTTGAGA+TGG	+	tig0010967:10492-10511	Msa1349550:CDS	35.0%
	TTAAGGCCTGATATTAGAAG+AGG	+	tig0010967:10524-10543	Msa1349550:CDS	35.0%
	AACCTTCCTCTTCTAATATC+AGG	-	tig0010967:10533-10552	None:intergenic	35.0%
	ATAATTAACTTCTCCTCCTC+AGG	-	tig0010967:10560-10579	None:intergenic	35.0%
!	CATTCCCTTGTTGTGTAATA+TGG	+	tig0010967:10659-10678	Msa1349550:intron	35.0%
	AGCAATCTTGGTATGTATGA+AGG	+	tig0010967:10862-10881	Msa1349550:intron	35.0%
	ATTTCATTGTCTGTTCTACC+AGG	-	tig0010967:11159-11178	None:intergenic	35.0%
	GAACTGTAATTGATCAACTG+AGG	-	tig0010967:11279-11298	None:intergenic	35.0%
!	TCATGATGGAATAGTACTTC+TGG	-	tig0010967:11444-11463	None:intergenic	35.0%
	TCAAACTCACAGTATCATGA+TGG	-	tig0010967:11458-11477	None:intergenic	35.0%
	GAATAATGTGGAAAACAGCA+TGG	+	tig0010967:11605-11624	Msa1349550:CDS	35.0%
	GCAATCTTGTAATATGGATG+AGG	+	tig0010967:11644-11663	Msa1349550:CDS	35.0%
	TCTTGTAATATGGATGAGGA+AGG	+	tig0010967:11648-11667	Msa1349550:CDS	35.0%
	AGGAGGAGAGTTATTAACAT+TGG	+	tig0010967:11668-11687	Msa1349550:CDS	35.0%
	GACAAGAAGAGTTGAATGAA+TGG	+	tig0010967:11703-11722	Msa1349550:CDS	35.0%
!!!	TCCTAGCTTTATTTTCAGCT+GGG	+	tig0010967:11746-11765	Msa1349550:CDS	35.0%
	GTACCAAACTCATCACATAT+GGG	+	tig0010967:11810-11829	Msa1349550:CDS	35.0%
	GGAAAAGGAGAAAGTGAATT+AGG	-	tig0010967:11840-11859	None:intergenic	35.0%
	ATTGAAACCTGTAGAAGGAA+AGG	+	tig0010967:12105-12124	Msa1349550:three_prime_UTR	35.0%
	CAAATAACCTTTCCTTCTAC+AGG	-	tig0010967:12115-12134	None:intergenic	35.0%
	TGGTATTTGACTGTACAAAG+TGG	+	tig0010967:12176-12195	Msa1349550:three_prime_UTR	35.0%
	TATTTGACTGTACAAAGTGG+TGG	+	tig0010967:12179-12198	Msa1349550:three_prime_UTR	35.0%
!	TCTGTTGATTGCAGCATGAA+TGG	-	tig0010967:10261-10280	None:intergenic	40.0%
	TTCATGCTGCAATCAACAGA+AGG	+	tig0010967:10261-10280	Msa1349550:CDS	40.0%
	CTATATCATGTAGCTAGGCT+TGG	-	tig0010967:10794-10813	None:intergenic	40.0%
!	TGAGTTTGAGTTCTGACACA+TGG	+	tig0010967:11469-11488	Msa1349550:CDS	40.0%
!!	CCTGAACTTGATGATGATCA+TGG	-	tig0010967:11506-11525	None:intergenic	40.0%
	CCATGATCATCATCAAGTTC+AGG	+	tig0010967:11503-11522	Msa1349550:CDS	40.0%
	GTTGTAAAAGCTATTGCAGC+TGG	-	tig0010967:11543-11562	None:intergenic	40.0%
	TGTAATATGGATGAGGAAGG+AGG	+	tig0010967:11651-11670	Msa1349550:CDS	40.0%
	AGAAGAGTTGAATGAATGGG+TGG	+	tig0010967:11707-11726	Msa1349550:CDS	40.0%
!!!	GTCCTAGCTTTATTTTCAGC+TGG	+	tig0010967:11745-11764	Msa1349550:CDS	40.0%
	TCCCAGCTGAAAATAAAGCT+AGG	-	tig0010967:11750-11769	None:intergenic	40.0%
!!	GAGAGTGTTGAAGGACAAAT+GGG	+	tig0010967:11768-11787	Msa1349550:CDS	40.0%
	GGTACCAAACTCATCACATA+TGG	+	tig0010967:11809-11828	Msa1349550:CDS	40.0%
	GTTCCCATATGTGATGAGTT+TGG	-	tig0010967:11816-11835	None:intergenic	40.0%
!!!	TGAGTGTTTTGACAAGGAAG+AGG	+	tig0010967:12052-12071	Msa1349550:three_prime_UTR	40.0%
!	TCTGTTGATTGCAGCATGAA+TGG	-	tig0010967:10261-10280	None:intergenic	40.0%
	TTCATGCTGCAATCAACAGA+AGG	+	tig0010967:10261-10280	Msa1349550:CDS	40.0%
	CTATATCATGTAGCTAGGCT+TGG	-	tig0010967:10794-10813	None:intergenic	40.0%
!	TGAGTTTGAGTTCTGACACA+TGG	+	tig0010967:11469-11488	Msa1349550:CDS	40.0%
!!	CCTGAACTTGATGATGATCA+TGG	-	tig0010967:11506-11525	None:intergenic	40.0%
	CCATGATCATCATCAAGTTC+AGG	+	tig0010967:11503-11522	Msa1349550:CDS	40.0%
	GTTGTAAAAGCTATTGCAGC+TGG	-	tig0010967:11543-11562	None:intergenic	40.0%
	TGTAATATGGATGAGGAAGG+AGG	+	tig0010967:11651-11670	Msa1349550:CDS	40.0%
	AGAAGAGTTGAATGAATGGG+TGG	+	tig0010967:11707-11726	Msa1349550:CDS	40.0%
!!!	GTCCTAGCTTTATTTTCAGC+TGG	+	tig0010967:11745-11764	Msa1349550:CDS	40.0%
	TCCCAGCTGAAAATAAAGCT+AGG	-	tig0010967:11750-11769	None:intergenic	40.0%
!!	GAGAGTGTTGAAGGACAAAT+GGG	+	tig0010967:11768-11787	Msa1349550:CDS	40.0%
	GGTACCAAACTCATCACATA+TGG	+	tig0010967:11809-11828	Msa1349550:CDS	40.0%
	GTTCCCATATGTGATGAGTT+TGG	-	tig0010967:11816-11835	None:intergenic	40.0%
!!!	TGAGTGTTTTGACAAGGAAG+AGG	+	tig0010967:12052-12071	Msa1349550:three_prime_UTR	40.0%
	AGAAGGTTAAGAGAGGCCTT+TGG	+	tig0010967:10278-10297	Msa1349550:CDS	45.0%
	CATCTTCTTCAGGTGACCAA+AGG	-	tig0010967:10297-10316	None:intergenic	45.0%
	CTACTCATGGTTATGGTTGC+TGG	+	tig0010967:10338-10357	Msa1349550:CDS	45.0%
	AGTGAAGTTCCTGAGAAAGC+TGG	+	tig0010967:10361-10380	Msa1349550:CDS	45.0%
!!	TTTTCAGGGCTTCAAAGGTG+TGG	+	tig0010967:10470-10489	Msa1349550:intron	45.0%
	GGCCTGATATTAGAAGAGGA+AGG	+	tig0010967:10528-10547	Msa1349550:CDS	45.0%
	AAGAGGAAGGTTTACACCTG+AGG	+	tig0010967:10541-10560	Msa1349550:CDS	45.0%
	ATAAGCCTTCATGGGGTTGT+TGG	+	tig0010967:10578-10597	Msa1349550:CDS	45.0%
	AGCAATCAACCTCGTAGCTA+TGG	+	tig0010967:10885-10904	Msa1349550:intron	45.0%
	CAACCTCGTAGCTATGGTTT+CGG	+	tig0010967:10891-10910	Msa1349550:intron	45.0%
	AACCTCGTAGCTATGGTTTC+GGG	+	tig0010967:10892-10911	Msa1349550:intron	45.0%
	TGGTTTCGGGGAAGTTAAGA+TGG	+	tig0010967:10905-10924	Msa1349550:intron	45.0%
	AAAGCTATTGCAGCTGGATG+AGG	-	tig0010967:11537-11556	None:intergenic	45.0%
!!	GGAGAGTGTTGAAGGACAAA+TGG	+	tig0010967:11767-11786	Msa1349550:CDS	45.0%
!	AGTGTTGAAGGACAAATGGG+AGG	+	tig0010967:11771-11790	Msa1349550:CDS	45.0%
	GTAGCAAGCTCTTCCTAGTT+AGG	-	tig0010967:11929-11948	None:intergenic	45.0%
	AGGCGATTGAAACCTGTAGA+AGG	+	tig0010967:12100-12119	Msa1349550:three_prime_UTR	45.0%
	AGAAGGTTAAGAGAGGCCTT+TGG	+	tig0010967:10278-10297	Msa1349550:CDS	45.0%
	CATCTTCTTCAGGTGACCAA+AGG	-	tig0010967:10297-10316	None:intergenic	45.0%
	CTACTCATGGTTATGGTTGC+TGG	+	tig0010967:10338-10357	Msa1349550:CDS	45.0%
	AGTGAAGTTCCTGAGAAAGC+TGG	+	tig0010967:10361-10380	Msa1349550:CDS	45.0%
!!	TTTTCAGGGCTTCAAAGGTG+TGG	+	tig0010967:10470-10489	Msa1349550:intron	45.0%
	GGCCTGATATTAGAAGAGGA+AGG	+	tig0010967:10528-10547	Msa1349550:CDS	45.0%
	AAGAGGAAGGTTTACACCTG+AGG	+	tig0010967:10541-10560	Msa1349550:CDS	45.0%
	ATAAGCCTTCATGGGGTTGT+TGG	+	tig0010967:10578-10597	Msa1349550:CDS	45.0%
	AGCAATCAACCTCGTAGCTA+TGG	+	tig0010967:10885-10904	Msa1349550:intron	45.0%
	CAACCTCGTAGCTATGGTTT+CGG	+	tig0010967:10891-10910	Msa1349550:intron	45.0%
	AACCTCGTAGCTATGGTTTC+GGG	+	tig0010967:10892-10911	Msa1349550:intron	45.0%
	TGGTTTCGGGGAAGTTAAGA+TGG	+	tig0010967:10905-10924	Msa1349550:intron	45.0%
	AAAGCTATTGCAGCTGGATG+AGG	-	tig0010967:11537-11556	None:intergenic	45.0%
!!	GGAGAGTGTTGAAGGACAAA+TGG	+	tig0010967:11767-11786	Msa1349550:CDS	45.0%
!	AGTGTTGAAGGACAAATGGG+AGG	+	tig0010967:11771-11790	Msa1349550:CDS	45.0%
	GTAGCAAGCTCTTCCTAGTT+AGG	-	tig0010967:11929-11948	None:intergenic	45.0%
	AGGCGATTGAAACCTGTAGA+AGG	+	tig0010967:12100-12119	Msa1349550:three_prime_UTR	45.0%
	AAGTGCAGACCAGCTTTCTC+AGG	-	tig0010967:10373-10392	None:intergenic	50.0%
	AGGAAGGTTTACACCTGAGG+AGG	+	tig0010967:10544-10563	Msa1349550:CDS	50.0%
	TGTTGCCAACAACCCCATGA+AGG	-	tig0010967:10586-10605	None:intergenic	50.0%
	TTCATGGGGTTGTTGGCAAC+AGG	+	tig0010967:10585-10604	Msa1349550:CDS	50.0%
	ACCTCGTAGCTATGGTTTCG+GGG	+	tig0010967:10893-10912	Msa1349550:intron	50.0%
	CACATTGCAAGTCACTTGCC+TGG	+	tig0010967:11138-11157	Msa1349550:CDS	50.0%
!!	TTCAGCTGGGAGAGTGTTGA+AGG	+	tig0010967:11759-11778	Msa1349550:CDS	50.0%
	GGGAGGTGAAGAACAAGTAC+TGG	+	tig0010967:11788-11807	Msa1349550:CDS	50.0%
	AAGTGCAGACCAGCTTTCTC+AGG	-	tig0010967:10373-10392	None:intergenic	50.0%
	AGGAAGGTTTACACCTGAGG+AGG	+	tig0010967:10544-10563	Msa1349550:CDS	50.0%
	TGTTGCCAACAACCCCATGA+AGG	-	tig0010967:10586-10605	None:intergenic	50.0%
	TTCATGGGGTTGTTGGCAAC+AGG	+	tig0010967:10585-10604	Msa1349550:CDS	50.0%
	ACCTCGTAGCTATGGTTTCG+GGG	+	tig0010967:10893-10912	Msa1349550:intron	50.0%
	CACATTGCAAGTCACTTGCC+TGG	+	tig0010967:11138-11157	Msa1349550:CDS	50.0%
!!	TTCAGCTGGGAGAGTGTTGA+AGG	+	tig0010967:11759-11778	Msa1349550:CDS	50.0%
	GGGAGGTGAAGAACAAGTAC+TGG	+	tig0010967:11788-11807	Msa1349550:CDS	50.0%
	TCCCCGAAACCATAGCTACG+AGG	-	tig0010967:10897-10916	None:intergenic	55.0%
	GCTATTGCAGCTGGATGAGG+AGG	-	tig0010967:11534-11553	None:intergenic	55.0%
	TCCCCGAAACCATAGCTACG+AGG	-	tig0010967:10897-10916	None:intergenic	55.0%
	GCTATTGCAGCTGGATGAGG+AGG	-	tig0010967:11534-11553	None:intergenic	55.0%

Chromosome	Type	Strat	End	Strand	Name
tig0010967	gene	10158	12241	10158	ID=Msa1349550;Name=Msa1349550
tig0010967	mRNA	10158	12241	10158	ID=Msa1349550-mRNA-1;Parent=Msa1349550;Name=Msa1349550-mRNA-1;_AED=0.04;_eAED=0.04;_QI=92\|1\|1\|1\|1\|1\|3\|366\|335
tig0010967	exon	10158	10382	10158	ID=Msa1349550-mRNA-1:exon:7011;Parent=Msa1349550-mRNA-1
tig0010967	exon	10477	10606	10477	ID=Msa1349550-mRNA-1:exon:7012;Parent=Msa1349550-mRNA-1
tig0010967	exon	11131	12241	11131	ID=Msa1349550-mRNA-1:exon:7013;Parent=Msa1349550-mRNA-1
tig0010967	five_prime_UTR	10158	10249	10158	ID=Msa1349550-mRNA-1:five_prime_utr;Parent=Msa1349550-mRNA-1
tig0010967	CDS	10250	10382	10250	ID=Msa1349550-mRNA-1:cds;Parent=Msa1349550-mRNA-1
tig0010967	CDS	10477	10606	10477	ID=Msa1349550-mRNA-1:cds;Parent=Msa1349550-mRNA-1
tig0010967	CDS	11131	11875	11131	ID=Msa1349550-mRNA-1:cds;Parent=Msa1349550-mRNA-1
tig0010967	three_prime_UTR	11876	12241	11876	ID=Msa1349550-mRNA-1:three_prime_utr;Parent=Msa1349550-mRNA-1

Gene Sequence

>Msa1349550

ATGGGTCACCATTCATGCTGCAATCAACAGAAGGTTAAGAGAGGCCTTTGGTCACCTGAAGAAGATGAGAAACTCATTAGATACATTACTACTCATGGTTATGGTTGCTGGAGTGAAGTTCCTGAGAAAGCTGGGCTTCAAAGGTGTGGTAAAAGTTGTAGGTTGAGATGGATAAATTATTTAAGGCCTGATATTAGAAGAGGAAGGTTTACACCTGAGGAGGAGAAGTTAATTATAAGCCTTCATGGGGTTGTTGGCAACAGATGGGCTCACATTGCAAGTCACTTGCCTGGTAGAACAGACAATGAAATAAAAAACTATTGGAATTCATGGATCAAAAAGAAAATTAGAAAGTCTTCTTCTTCTGCTCCTAATTTATCAACACCAACTATTGATCATCATCATCATCCTCAGTTGATCAATTACAGTTCCATTAATCAACTAGATAATTACTTTACCAACCAAGAAAATGTAACAACAAAAGAAACCTTATTTTCATCAACATGTCCTTTATTTATGTTTGACACAAGTTCACTACATGAAACAACAGCAACAGACACAAATGTAATAAGACCAGAAGTACTATTCCATCATGATACTGTGAGTTTGAGTTCTGACACATGGAACTTGAATCACCATGATCATCATCAAGTTCAGGCATTTCCTCCTCATCCAGCTGCAATAGCTTTTACAACAATTCATGATACTAGTAATTATAATCTTCCACCATTGATAGAGAATAATGTGGAAAACAGCATGGTGCAAATTGATCAAGTGCAATCTTGTAATATGGATGAGGAAGGAGGAGAGTTATTAACATTGGAGTCATTGCAAAGACAAGAAGAGTTGAATGAATGGGTGGAAACTCAACAACAGTGTCCTAGCTTTATTTTCAGCTGGGAGAGTGTTGAAGGACAAATGGGAGGTGAAGAACAAGTACTGGTACCAAACTCATCACATATGGGAACACCTAATTCACTTTCTCCTTTTCCTTCTTCACTATTATGA

Protein sequence

>Msa1349550

MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHGVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKKIRKSSSSAPNLSTPTIDHHHHPQLINYSSINQLDNYFTNQENVTTKETLFSSTCPLFMFDTSSLHETTATDTNVIRPEVLFHHDTVSLSSDTWNLNHHDHHQVQAFPPHPAAIAFTTIHDTSNYNLPPLIENNVENSMVQIDQVQSCNMDEEGGELLTLESLQRQEELNEWVETQQQCPSFIFSWESVEGQMGGEEQVLVPNSSHMGTPNSLSPFPSSLL*