AlfalfaGEDB | Msa0389880

M. sativa cultivar zhongmu-4 / Msa0389880

KEGG: K02947|K09422
GO: GO:0000028 GO:0001763 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003735 GO:0005198 GO:0005488 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005840 GO:0005844 GO:0006996 GO:0007275 GO:0008150 GO:0009507 GO:0009536 GO:0009653 GO:0009888 GO:0009933 GO:0009987 GO:0010014 GO:0010016 GO:0010223 GO:0010252 GO:0010346 GO:0015935 GO:0016043 GO:0022603 GO:0022607 GO:0022613 GO:0022618 GO:0022626 GO:0022627 GO:0030312 GO:0032501 GO:0032502 GO:0032991 GO:0034622 GO:0042254 GO:0042255 GO:0042274 GO:0042592 GO:0042788 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043933 GO:0044085 GO:0044391 GO:0044422 GO:0044424 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0048367 GO:0048507 GO:0048532 GO:0048646 GO:0048731 GO:0048831 GO:0048856 GO:0048878 GO:0050789 GO:0050793 GO:0051239 GO:0060688 GO:0065003 GO:0065007 GO:0065008 GO:0070925 GO:0071826 GO:0071840 GO:0071944 GO:0090506 GO:0097159 GO:1900618 GO:1901363 GO:1905393 GO:1905428 GO:1990904 GO:2000026 GO:2000032
PFAM: PF00249.34

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0389880	XP_003611063.2	96.765	340	5	3	1	335	1	339	0.0	670

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0389880	sp\|Q8LPH6\|MYB86_ARATH	58.182	165	59	3	1	164	1	156	7.34e-63	206

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0389880	G7KC05	96.765	340	5	3	1	335	1	339	0.0	670

TFs/TRs:

Gene ID	Type	Classification
Msa0389880	TF	MYB

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0018060	Msa0389880	0.839954	1.162998e-57	-8.615850e-47
Msa0052380	Msa0389880	0.823262	1.522991e-53	-8.615850e-47
Msa0097090	Msa0389880	0.814206	1.733819e-51	-8.615850e-47
Msa0097390	Msa0389880	0.813221	2.855971e-51	-8.615850e-47
Msa0186640	Msa0389880	0.816599	5.090572e-52	-8.615850e-47
Msa0199960	Msa0389880	0.811712	6.102391e-51	-8.615850e-47
Msa0218810	Msa0389880	0.824204	9.163720e-54	-8.615850e-47
Msa0389880	Msa0458480	0.848584	5.585084e-60	-8.615850e-47
Msa0389880	Msa0505140	0.809043	2.299294e-50	-8.615850e-47
Msa0389880	Msa0662340	0.803798	2.934801e-49	-8.615850e-47
Msa0389880	Msa0712590	0.847365	1.210687e-59	-8.615850e-47
Msa0389880	Msa0750240	0.803232	3.846151e-49	-8.615850e-47
Msa0389880	Msa0752940	0.825381	4.834847e-54	-8.615850e-47
Msa0389880	Msa0760130	0.810086	1.372883e-50	-8.615850e-47
Msa0389880	Msa0830510	0.815687	8.135690e-52	-8.615850e-47
Msa0389880	Msa0839190	0.811309	7.468313e-51	-8.615850e-47
Msa0389880	Msa0846530	0.844544	7.081329e-59	-8.615850e-47
Msa0389880	Msa0926890	0.810711	1.006448e-50	-8.615850e-47
Msa0389880	Msa0969520	0.805742	1.152584e-49	-8.615850e-47
Msa0389880	Msa1024740	0.851724	7.367353e-61	-8.615850e-47
Msa0389880	Msa1031930	0.821021	5.036928e-53	-8.615850e-47
Msa0389880	Msa1063500	0.830171	3.413276e-55	-8.615850e-47
Msa0389880	Msa1108790	0.847046	1.480975e-59	-8.615850e-47
Msa0389880	Msa1152510	0.844011	9.841610e-59	-8.615850e-47
Msa0389880	Msa1349550	0.961287	1.581792e-119	-8.615850e-47
Msa0389880	Msa1353470	0.807703	4.439744e-50	-8.615850e-47
Msa0389880	Msa1418990	0.831206	1.903879e-55	-8.615850e-47
Msa0389880	Msa1459050	0.800594	1.339160e-48	-8.615850e-47
Msa0242490	Msa0389880	0.815302	9.910762e-52	-8.615850e-47
Msa0243600	Msa0389880	0.816906	4.342577e-52	-8.615850e-47
Msa0255620	Msa0389880	0.818360	2.041527e-52	-8.615850e-47
Msa0333070	Msa0389880	0.830226	3.307885e-55	-8.615850e-47
Msa0358890	Msa0389880	0.815812	7.630147e-52	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0389880	MtrunA17_Chr5g0397231	96.765	340	5	3	1	335	1	339	0.0	670
Msa0389880	MtrunA17_Chr8g0387421	62.029	345	87	15	1	333	1	313	7.26e-122	353
Msa0389880	MtrunA17_Chr8g0342521	72.180	133	36	1	1	133	1	132	6.81e-67	214
Msa0389880	MtrunA17_Chr8g0342541	78.448	116	25	0	1	116	1	116	1.18e-66	213
Msa0389880	MtrunA17_Chr2g0330041	47.368	247	90	5	1	219	1	235	3.92e-64	208
Msa0389880	MtrunA17_Chr4g0058631	52.475	202	67	4	1	178	1	197	6.48e-64	206
Msa0389880	MtrunA17_Chr1g0193371	72.269	119	33	0	1	119	1	119	2.11e-63	205
Msa0389880	MtrunA17_Chr1g0193801	71.186	118	34	0	1	118	1	118	6.56e-63	204
Msa0389880	MtrunA17_Chr7g0270891	72.034	118	33	0	1	118	1	118	4.11e-62	202
Msa0389880	MtrunA17_Chr2g0309911	74.138	116	29	1	1	116	1	115	1.94e-61	198
Msa0389880	MtrunA17_Chr8g0342481	73.504	117	30	1	1	116	1	117	5.22e-61	200
Msa0389880	MtrunA17_Chr1g0211161	62.238	143	44	1	3	145	4	136	3.53e-60	192
Msa0389880	MtrunA17_Chr3g0117091	70.339	118	35	0	1	118	1	118	1.21e-59	195
Msa0389880	MtrunA17_Chr5g0410961	55.844	154	67	1	1	154	1	153	6.09e-58	190
Msa0389880	MtrunA17_Chr7g0271241	72.477	109	30	0	1	109	1	109	1.95e-57	190
Msa0389880	MtrunA17_Chr2g0323411	44.954	218	98	4	1	218	1	196	2.50e-56	186
Msa0389880	MtrunA17_Chr1g0203411	66.387	119	40	0	1	119	1	119	2.36e-55	182
Msa0389880	MtrunA17_Chr3g0088461	67.273	110	36	0	8	117	18	127	4.49e-55	183
Msa0389880	MtrunA17_Chr4g0032401	51.111	180	70	5	11	172	16	195	6.67e-55	182
Msa0389880	MtrunA17_Chr4g0039971	58.647	133	54	1	1	133	2	133	1.20e-53	179
Msa0389880	MtrunA17_Chr2g0328771	59.420	138	52	2	12	145	20	157	1.47e-53	178
Msa0389880	MtrunA17_Chr6g0452271	61.864	118	45	0	1	118	1	118	1.62e-53	179
Msa0389880	MtrunA17_Chr6g0453471	61.864	118	45	0	1	118	1	118	8.73e-53	177
Msa0389880	MtrunA17_Chr8g0385321	65.517	116	40	0	1	116	1	116	9.14e-53	176
Msa0389880	MtrunA17_Chr5g0435101	63.717	113	41	0	6	118	5	117	3.27e-52	171
Msa0389880	MtrunA17_Chr4g0048511	55.479	146	57	2	1	145	1	139	4.09e-52	176
Msa0389880	MtrunA17_Chr3g0115821	60.345	116	46	0	1	116	1	116	4.22e-52	175
Msa0389880	MtrunA17_Chr3g0131121	62.069	116	44	0	1	116	1	116	1.05e-51	173
Msa0389880	MtrunA17_Chr2g0281071	63.025	119	43	1	1	118	1	119	1.99e-51	173
Msa0389880	MtrunA17_Chr1g0203441	66.055	109	37	0	11	119	12	120	2.49e-51	171
Msa0389880	MtrunA17_Chr4g0037141	61.207	116	45	0	1	116	1	116	2.73e-51	171
Msa0389880	MtrunA17_Chr3g0110351	61.864	118	45	0	1	118	1	118	1.29e-50	170
Msa0389880	MtrunA17_Chr7g0274581	43.478	207	101	5	1	206	1	192	1.65e-50	167
Msa0389880	MtrunA17_Chr1g0151941	61.538	117	44	1	1	116	1	117	1.75e-50	168
Msa0389880	MtrunA17_Chr7g0217741	60.169	118	47	0	1	118	1	118	2.32e-50	170
Msa0389880	MtrunA17_Chr5g0434571	61.864	118	45	0	1	118	37	154	2.81e-50	171
Msa0389880	MtrunA17_Chr4g0042671	56.391	133	57	1	1	133	1	132	5.58e-50	171
Msa0389880	MtrunA17_Chr4g0057031	62.712	118	44	0	1	118	1	118	7.39e-50	167
Msa0389880	MtrunA17_Chr4g0070611	53.623	138	64	0	1	138	1	138	1.03e-49	168
Msa0389880	MtrunA17_Chr7g0217221	61.157	121	47	0	1	121	1	121	1.16e-49	167
Msa0389880	MtrunA17_Chr5g0395281	59.524	126	50	1	8	133	8	132	1.59e-49	167
Msa0389880	MtrunA17_Chr7g0228891	62.393	117	44	0	1	117	1	117	1.72e-49	166
Msa0389880	MtrunA17_Chr8g0349261	55.102	147	63	3	1	145	1	146	2.76e-49	166
Msa0389880	MtrunA17_Chr4g0070641	53.623	138	64	0	1	138	1	138	6.66e-49	161
Msa0389880	MtrunA17_Chr1g0187761	57.895	133	54	1	1	131	1	133	7.72e-49	164
Msa0389880	MtrunA17_Chr4g0068061	61.207	116	45	0	1	116	1	116	8.92e-49	166
Msa0389880	MtrunA17_Chr8g0342531	72.340	94	26	0	1	94	1	94	1.09e-48	160
Msa0389880	MtrunA17_Chr7g0275911	58.974	117	48	0	1	117	1	117	1.49e-48	163
Msa0389880	MtrunA17_Chr8g0342511	77.011	87	20	0	1	87	1	87	3.12e-48	157
Msa0389880	MtrunA17_Chr6g0470971	65.138	109	38	0	11	119	13	121	3.38e-48	163
Msa0389880	MtrunA17_Chr4g0028311	51.948	154	66	2	1	153	1	147	1.02e-47	163
Msa0389880	MtrunA17_Chr4g0060721	57.724	123	52	0	1	123	2	124	5.20e-47	162
Msa0389880	MtrunA17_Chr3g0103281	59.483	116	47	0	1	116	1	116	5.26e-47	161
Msa0389880	MtrunA17_Chr2g0323351	52.593	135	62	1	7	139	7	141	6.10e-47	159
Msa0389880	MtrunA17_Chr8g0346561	52.174	138	62	1	1	138	1	134	7.04e-47	160
Msa0389880	MtrunA17_Chr2g0311221	62.385	109	41	0	2	110	4	112	9.56e-47	161
Msa0389880	MtrunA17_Chr7g0254411	59.322	118	48	0	1	118	1	118	6.75e-46	159
Msa0389880	MtrunA17_Chr3g0135311	59.829	117	46	1	1	116	1	117	7.52e-46	159
Msa0389880	MtrunA17_Chr1g0167661	53.125	128	60	0	1	128	1	128	8.37e-46	156
Msa0389880	MtrunA17_Chr1g0194951	52.899	138	65	0	1	138	1	138	1.12e-45	159
Msa0389880	MtrunA17_Chr7g0261281	57.759	116	49	0	1	116	1	116	1.13e-45	156
Msa0389880	MtrunA17_Chr7g0264641	58.120	117	48	1	1	116	1	117	2.23e-45	155
Msa0389880	MtrunA17_Chr4g0044421	57.500	120	51	0	1	120	1	120	2.69e-45	153
Msa0389880	MtrunA17_Chr7g0228231	57.258	124	51	1	1	122	1	124	3.64e-45	153
Msa0389880	MtrunA17_Chr1g0152011	58.120	117	48	1	1	116	1	117	3.69e-45	157
Msa0389880	MtrunA17_Chr2g0327351	59.459	111	44	1	1	110	1	111	3.98e-45	156
Msa0389880	MtrunA17_Chr4g0022931	58.036	112	47	0	5	116	6	117	4.54e-45	155
Msa0389880	MtrunA17_Chr1g0167691	57.759	116	49	0	1	116	1	116	5.05e-45	154
Msa0389880	MtrunA17_Chr3g0092401	58.475	118	49	0	1	118	2	119	6.70e-45	155
Msa0389880	MtrunA17_Chr5g0400821	58.120	117	48	1	1	116	1	117	7.08e-45	155
Msa0389880	MtrunA17_Chr8g0342461	69.474	95	28	1	1	94	1	95	7.25e-45	150
Msa0389880	MtrunA17_Chr3g0121241	58.559	111	46	0	6	116	36	146	7.65e-45	155
Msa0389880	MtrunA17_Chr8g0342471	70.652	92	26	1	1	91	1	92	2.14e-44	149
Msa0389880	MtrunA17_Chr6g0453211	61.321	106	41	0	6	111	6	111	2.42e-44	154
Msa0389880	MtrunA17_Chr4g0022901	57.658	111	47	0	5	115	6	116	8.63e-44	151
Msa0389880	MtrunA17_Chr4g0022911	56.757	111	48	0	5	115	6	116	9.63e-44	152
Msa0389880	MtrunA17_Chr4g0054391	60.000	110	43	1	1	109	1	110	5.23e-43	150
Msa0389880	MtrunA17_Chr4g0072751	59.459	111	44	1	1	110	1	111	8.10e-43	151
Msa0389880	MtrunA17_Chr6g0450101	56.667	120	50	1	1	118	1	120	8.52e-43	147
Msa0389880	MtrunA17_Chr1g0209661	36.471	255	137	5	9	244	24	272	8.72e-43	150
Msa0389880	MtrunA17_Chr6g0487491	52.273	132	54	2	1	123	1	132	6.75e-42	146
Msa0389880	MtrunA17_Chr8g0343831	56.881	109	47	0	10	118	6	114	1.86e-41	145
Msa0389880	MtrunA17_Chr7g0269831	58.621	116	48	0	1	116	1	116	4.82e-41	146
Msa0389880	MtrunA17_Chr4g0055981	59.813	107	43	0	9	115	52	158	4.95e-41	143
Msa0389880	MtrunA17_Chr5g0417821	59.048	105	43	0	12	116	7	111	9.77e-41	144
Msa0389880	MtrunA17_Chr3g0099131	57.944	107	45	0	12	118	41	147	5.00e-40	147
Msa0389880	MtrunA17_Chr1g0194291	54.701	117	53	0	2	118	11	127	5.76e-40	141
Msa0389880	MtrunA17_Chr1g0168661	54.386	114	52	0	4	117	13	126	9.77e-40	140
Msa0389880	MtrunA17_Chr4g0022881	56.075	107	47	0	8	114	8	114	1.53e-39	139
Msa0389880	MtrunA17_Chr4g0022891	55.660	106	47	0	8	113	8	113	2.04e-39	139
Msa0389880	MtrunA17_Chr8g0354661	56.604	106	46	0	12	117	37	142	3.03e-39	145
Msa0389880	MtrunA17_Chr3g0080861	56.604	106	46	0	12	117	37	142	4.85e-39	144
Msa0389880	MtrunA17_Chr1g0186061	54.955	111	50	0	5	115	13	123	1.28e-38	137
Msa0389880	MtrunA17_Chr1g0194301	55.140	107	48	0	12	118	33	139	3.49e-38	137
Msa0389880	MtrunA17_Chr7g0247131	59.804	102	40	1	44	145	10	110	4.41e-37	134
Msa0389880	MtrunA17_Chr1g0154031	55.660	106	47	0	12	117	76	181	7.24e-37	137
Msa0389880	MtrunA17_Chr4g0042611	59.091	88	36	0	1	88	1	88	6.14e-36	125
Msa0389880	MtrunA17_Chr8g0360111	55.340	103	46	0	8	110	21	123	8.52e-36	130
Msa0389880	MtrunA17_Chr7g0240821	56.000	100	44	0	17	116	6	105	2.29e-35	128
Msa0389880	MtrunA17_Chr2g0327821	45.238	126	65	1	9	134	3	124	2.95e-35	128
Msa0389880	MtrunA17_Chr4g0068921	59.223	103	42	0	12	114	24	126	3.72e-35	126
Msa0389880	MtrunA17_Chr1g0180391	47.826	115	60	0	3	117	10	124	1.03e-34	126
Msa0389880	MtrunA17_Chr2g0322521	55.660	106	47	0	12	117	29	134	1.39e-34	130
Msa0389880	MtrunA17_Chr2g0293911	57.009	107	46	0	12	118	24	130	1.74e-34	129
Msa0389880	MtrunA17_Chr7g0220341	44.681	141	74	2	8	144	21	161	2.03e-34	127
Msa0389880	MtrunA17_Chr5g0434911	49.091	110	56	0	7	116	16	125	4.96e-34	126
Msa0389880	MtrunA17_Chr5g0434931	50.476	105	52	0	12	116	35	139	1.72e-33	125
Msa0389880	MtrunA17_Chr8g0334881	49.565	115	57	1	4	117	2	116	2.22e-33	125
Msa0389880	MtrunA17_Chr4g0030881	47.009	117	55	1	6	115	1	117	2.85e-33	124
Msa0389880	MtrunA17_Chr1g0192411	41.212	165	86	3	11	171	11	168	5.65e-33	126
Msa0389880	MtrunA17_Chr5g0434831	50.476	105	52	0	12	116	7	111	3.85e-32	119
Msa0389880	MtrunA17_Chr4g0013361	49.533	107	53	1	12	117	10	116	6.99e-32	120
Msa0389880	MtrunA17_Chr7g0228991	49.533	107	54	0	10	116	27	133	9.46e-32	120
Msa0389880	MtrunA17_Chr5g0440781	49.074	108	53	2	12	118	12	118	3.35e-31	116
Msa0389880	MtrunA17_Chr2g0294811	55.682	88	39	0	1	88	1	88	3.81e-31	114
Msa0389880	MtrunA17_Chr5g0441141	49.074	108	53	2	12	118	12	118	9.29e-31	117
Msa0389880	MtrunA17_Chr5g0440761	49.074	108	53	2	12	118	12	118	1.02e-30	117
Msa0389880	MtrunA17_Chr5g0434841	47.664	107	56	0	10	116	18	124	1.18e-30	118
Msa0389880	MtrunA17_Chr5g0395221	62.338	77	29	0	12	88	12	88	1.83e-30	110
Msa0389880	MtrunA17_Chr2g0323321	54.651	86	39	0	7	92	6	91	2.44e-29	108
Msa0389880	MtrunA17_Chr5g0441131	40.132	152	84	3	12	162	9	154	2.53e-29	111
Msa0389880	MtrunA17_Chr5g0429661	39.744	156	83	4	14	169	122	266	1.75e-28	113
Msa0389880	MtrunA17_Chr5g0401731	48.696	115	56	2	3	115	2	115	3.25e-28	112
Msa0389880	MtrunA17_Chr3g0099141	50.575	87	43	0	8	94	36	122	5.56e-28	106
Msa0389880	MtrunA17_Chr4g0008551	50.476	105	50	2	11	115	36	138	8.98e-28	111
Msa0389880	MtrunA17_Chr6g0454921	51.961	102	48	1	14	115	15	115	1.10e-27	107
Msa0389880	MtrunA17_Chr4g0053431	50.980	102	49	1	14	115	5	105	3.03e-27	108
Msa0389880	MtrunA17_Chr6g0480581	45.161	124	58	3	14	134	4	120	1.57e-26	105
Msa0389880	MtrunA17_Chr4g0042501	43.802	121	62	2	2	122	98	212	6.77e-26	107
Msa0389880	MtrunA17_Chr5g0417621	45.536	112	60	1	11	122	131	241	1.29e-25	106
Msa0389880	MtrunA17_Chr6g0460661	44.860	107	56	2	17	122	19	123	3.40e-25	99.8
Msa0389880	MtrunA17_Chr3g0133601	48.182	110	54	2	8	115	29	137	6.48e-25	100
Msa0389880	MtrunA17_Chr4g0058991	42.857	112	63	1	12	123	207	317	1.41e-24	103
Msa0389880	MtrunA17_Chr7g0238631	47.573	103	53	1	14	116	113	214	1.55e-24	104
Msa0389880	MtrunA17_Chr5g0437321	44.800	125	59	3	8	128	14	132	1.69e-24	100
Msa0389880	MtrunA17_Chr3g0117511	42.478	113	62	2	14	124	183	294	3.36e-24	102
Msa0389880	MtrunA17_Chr3g0139671	46.602	103	54	1	14	116	85	186	1.47e-23	101
Msa0389880	MtrunA17_Chr3g0125801	49.074	108	52	2	14	120	16	121	2.68e-23	97.8
Msa0389880	MtrunA17_Chr7g0229101	57.143	70	30	0	44	113	4	73	3.71e-23	95.5
Msa0389880	MtrunA17_Chr1g0177901	37.313	134	83	1	25	158	5	137	4.92e-23	95.1
Msa0389880	MtrunA17_Chr7g0229131	54.167	72	33	0	45	116	5	76	5.56e-23	94.0
Msa0389880	MtrunA17_Chr1g0157731	45.631	103	55	1	14	116	91	192	1.01e-22	99.4
Msa0389880	MtrunA17_Chr5g0425591	48.193	83	42	1	12	93	9	91	4.28e-22	89.0
Msa0389880	MtrunA17_Chr7g0228531	32.353	204	112	7	12	194	218	416	6.53e-22	95.9
Msa0389880	MtrunA17_Chr5g0434901	58.462	65	27	0	46	110	7	71	6.75e-22	89.4
Msa0389880	MtrunA17_Chr6g0460671	43.119	109	61	1	14	122	99	206	1.32e-21	94.0
Msa0389880	MtrunA17_Chr6g0453751	46.154	91	40	2	12	93	20	110	3.18e-21	87.8
Msa0389880	MtrunA17_Chr3g0093811	52.055	73	35	0	44	116	14	86	3.75e-21	91.3
Msa0389880	MtrunA17_Chr5g0397841	45.098	102	54	2	8	109	105	204	8.77e-21	92.8
Msa0389880	MtrunA17_Chr7g0228401	45.545	101	51	2	25	125	290	386	1.44e-20	92.4
Msa0389880	MtrunA17_Chr7g0254261	41.026	117	63	2	1	117	81	191	1.51e-19	88.2
Msa0389880	MtrunA17_Chr7g0238651	36.290	124	77	1	14	135	7	130	1.59e-19	88.2
Msa0389880	MtrunA17_Chr7g0228481	28.856	201	123	5	12	194	218	416	2.78e-19	88.2
Msa0389880	MtrunA17_Chr5g0416341	34.862	109	70	1	17	125	29	136	3.15e-17	82.4
Msa0389880	MtrunA17_Chr7g0233061	43.000	100	48	4	14	110	180	273	3.54e-17	81.6
Msa0389880	MtrunA17_Chr1g0193901	55.000	60	26	1	10	68	9	68	2.84e-16	73.9
Msa0389880	MtrunA17_Chr1g0193891	55.000	60	26	1	10	68	9	68	2.84e-16	73.9
Msa0389880	MtrunA17_Chr1g0193871	55.000	60	26	1	10	68	9	68	2.84e-16	73.9
Msa0389880	MtrunA17_Chr1g0193881	55.000	60	26	1	10	68	9	68	2.84e-16	73.9
Msa0389880	MtrunA17_Chr8g0362231	35.398	113	70	2	17	127	25	136	1.28e-15	77.4
Msa0389880	MtrunA17_Chr3g0104491	34.211	76	46	1	53	124	1	76	9.20e-12	64.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0389880	AT1G63910.1	49.722	360	122	11	1	313	1	348	9.29e-98	294
Msa0389880	AT3G13890.2	77.586	116	26	0	1	116	1	116	6.25e-67	214
Msa0389880	AT5G26660.1	58.182	165	59	3	1	164	1	156	7.46e-64	206
Msa0389880	AT3G13890.1	72.000	125	26	1	1	116	1	125	1.12e-63	206
Msa0389880	AT4G01680.3	73.504	117	31	0	1	117	1	117	1.39e-63	202
Msa0389880	AT1G09540.1	73.729	118	31	0	1	118	1	118	3.06e-63	205
Msa0389880	AT4G01680.1	73.504	117	31	0	1	117	1	117	5.19e-63	204
Msa0389880	AT1G57560.1	71.186	118	34	0	1	118	1	118	1.43e-61	199
Msa0389880	AT1G57560.2	71.186	118	34	0	1	118	1	118	2.36e-61	197
Msa0389880	AT3G12720.1	74.138	116	29	1	1	116	12	126	4.29e-61	197
Msa0389880	AT4G01680.2	66.667	129	31	1	1	117	1	129	1.61e-59	195
Msa0389880	AT5G12870.1	66.372	113	38	0	10	122	16	128	8.99e-55	181
Msa0389880	AT3G01140.2	64.407	118	42	0	1	118	1	118	3.13e-54	181
Msa0389880	AT3G08500.1	63.559	118	40	1	3	117	18	135	1.52e-53	179
Msa0389880	AT3G02940.2	63.793	116	42	0	1	116	1	116	1.60e-53	178
Msa0389880	AT4G05100.1	63.866	119	42	1	1	118	1	119	2.25e-53	178
Msa0389880	AT3G02940.1	63.793	116	42	0	1	116	1	116	3.81e-53	177
Msa0389880	AT3G02940.3	63.793	116	42	0	1	116	1	116	3.81e-53	177
Msa0389880	AT5G16770.4	52.121	165	73	3	1	160	1	164	6.43e-53	177
Msa0389880	AT5G16770.3	52.121	165	73	3	1	160	1	164	6.43e-53	177
Msa0389880	AT5G15310.1	62.712	118	44	0	1	118	1	118	8.53e-53	177
Msa0389880	AT5G15310.4	62.712	118	44	0	1	118	1	118	9.85e-53	174
Msa0389880	AT5G15310.2	62.712	118	44	0	1	118	1	118	1.26e-52	176
Msa0389880	AT5G16770.1	52.121	165	73	3	1	160	1	164	1.47e-52	176
Msa0389880	AT5G16770.2	52.121	165	73	3	1	160	1	164	1.47e-52	176
Msa0389880	AT5G60890.1	62.832	113	42	0	6	118	6	118	1.79e-52	175
Msa0389880	AT3G01140.1	65.487	113	39	0	6	118	49	161	2.37e-52	177
Msa0389880	AT4G28110.1	62.185	119	45	0	1	119	1	119	5.95e-52	173
Msa0389880	AT4G21440.1	54.483	145	59	2	1	145	1	138	7.39e-52	175
Msa0389880	AT4G34990.1	62.931	116	43	0	1	116	1	116	1.14e-51	172
Msa0389880	AT2G16720.1	61.207	116	45	0	1	116	1	116	2.10e-51	171
Msa0389880	AT4G17785.2	63.248	117	42	1	1	116	1	117	3.09e-51	173
Msa0389880	AT4G38620.1	61.207	116	45	0	1	116	1	116	3.16e-51	171
Msa0389880	AT4G17785.1	63.248	117	42	1	1	116	1	117	3.93e-51	174
Msa0389880	AT2G31180.1	40.741	216	116	2	1	204	1	216	6.97e-51	169
Msa0389880	AT5G65230.1	62.069	116	44	0	1	116	1	116	8.42e-51	171
Msa0389880	AT1G34670.1	60.345	116	46	0	1	116	1	116	1.49e-50	172
Msa0389880	AT4G09460.1	59.483	116	47	0	1	116	1	116	1.51e-50	168
Msa0389880	AT5G10280.1	58.621	116	48	0	1	116	1	116	2.20e-50	171
Msa0389880	AT3G61250.1	61.207	116	45	0	1	116	1	116	2.21e-50	170
Msa0389880	AT1G22640.1	61.207	116	45	0	1	116	1	116	2.30e-50	168
Msa0389880	AT1G66230.1	61.864	118	45	0	1	118	1	118	2.38e-50	169
Msa0389880	AT4G12350.1	43.000	200	91	2	1	200	1	177	4.39e-50	169
Msa0389880	AT5G54230.1	63.559	118	43	0	1	118	1	118	8.32e-50	169
Msa0389880	AT3G23250.1	55.906	127	56	0	1	127	1	127	1.06e-49	167
Msa0389880	AT1G06180.1	45.178	197	98	2	1	189	1	195	1.13e-49	166
Msa0389880	AT5G16600.1	61.017	118	46	0	1	118	1	118	1.68e-49	168
Msa0389880	AT1G18570.1	62.931	116	42	1	6	120	6	121	4.45e-49	168
Msa0389880	AT4G22680.1	60.169	118	47	0	1	118	1	118	7.56e-49	165
Msa0389880	AT1G79180.1	57.812	128	54	0	2	129	4	131	8.81e-49	166
Msa0389880	AT5G61420.2	59.483	116	47	0	1	116	1	116	1.09e-48	167
Msa0389880	AT5G49330.1	62.069	116	44	0	1	116	1	116	1.10e-48	167
Msa0389880	AT5G07690.1	61.404	114	44	0	1	114	1	114	1.71e-48	166
Msa0389880	AT2G47460.1	59.524	126	47	1	1	122	1	126	5.85e-48	166
Msa0389880	AT1G35515.1	58.621	116	48	0	1	116	1	116	6.11e-48	160
Msa0389880	AT5G07700.1	59.483	116	47	0	1	116	1	116	1.65e-47	163
Msa0389880	AT5G07700.2	59.483	116	47	0	1	116	1	116	1.65e-47	163
Msa0389880	AT5G56110.1	59.483	116	47	0	1	116	1	116	1.74e-47	163
Msa0389880	AT1G08810.1	59.504	121	49	0	1	121	1	121	2.22e-47	161
Msa0389880	AT3G47600.1	59.016	122	50	0	1	122	1	122	2.33e-47	163
Msa0389880	AT5G23000.1	60.684	117	45	1	1	116	1	117	2.55e-47	162
Msa0389880	AT2G36890.1	55.882	136	51	2	1	135	1	128	9.22e-47	160
Msa0389880	AT3G62610.1	59.483	116	47	0	1	116	1	116	1.11e-46	161
Msa0389880	AT1G74430.1	55.833	120	53	0	1	120	1	120	1.29e-46	159
Msa0389880	AT2G36890.2	55.882	136	51	2	1	135	42	169	1.42e-46	161
Msa0389880	AT5G14340.1	59.829	117	47	0	1	117	13	129	1.44e-46	159
Msa0389880	AT1G56160.1	60.000	115	46	0	2	116	4	118	2.46e-46	159
Msa0389880	AT5G62470.2	59.016	122	50	0	1	122	1	122	3.11e-46	160
Msa0389880	AT1G74650.1	61.207	116	45	0	1	116	1	116	3.16e-46	160
Msa0389880	AT1G16490.1	57.480	127	50	1	2	128	4	126	4.57e-46	158
Msa0389880	AT3G27810.1	43.646	181	94	2	9	185	17	193	5.37e-46	156
Msa0389880	AT1G74080.1	51.799	139	61	1	6	138	6	144	8.26e-46	159
Msa0389880	AT5G57620.1	58.120	117	48	1	1	116	1	117	1.59e-45	158
Msa0389880	AT3G49690.1	58.974	117	47	1	1	116	1	117	2.55e-45	157
Msa0389880	AT3G28470.1	57.273	110	47	0	1	110	1	110	3.27e-45	157
Msa0389880	AT3G28910.1	59.322	118	48	0	6	123	6	123	9.43e-45	156
Msa0389880	AT3G48920.1	57.798	109	46	0	8	116	14	122	1.07e-44	154
Msa0389880	AT1G18710.1	50.000	146	63	1	1	146	1	136	1.48e-44	154
Msa0389880	AT5G52260.1	52.083	144	50	1	9	133	9	152	2.02e-44	153
Msa0389880	AT5G62470.1	59.016	122	49	1	1	122	1	121	2.33e-44	155
Msa0389880	AT4G25560.1	60.714	112	44	0	10	121	8	119	2.53e-44	154
Msa0389880	AT5G65790.1	57.265	117	49	1	1	116	1	117	4.23e-44	155
Msa0389880	AT3G13540.1	57.658	111	47	0	6	116	17	127	4.82e-44	152
Msa0389880	AT5G40350.1	55.556	126	54	1	11	134	16	141	5.52e-44	150
Msa0389880	AT5G35550.1	57.759	116	49	0	9	124	11	126	5.84e-44	152
Msa0389880	AT5G62320.1	54.098	122	49	1	2	116	3	124	1.72e-43	150
Msa0389880	AT4G37780.1	56.410	117	50	1	1	116	1	117	2.33e-43	152
Msa0389880	AT5G40330.1	56.481	108	47	0	9	116	9	116	5.56e-43	148
Msa0389880	AT5G14750.1	57.692	104	44	0	13	116	17	120	5.86e-43	147
Msa0389880	AT3G12820.1	59.292	113	46	0	6	118	8	120	5.90e-43	149
Msa0389880	AT3G01530.1	53.600	125	51	1	12	136	25	142	6.19e-43	147
Msa0389880	AT5G52600.1	56.637	113	49	0	12	124	12	124	9.23e-43	147
Msa0389880	AT3G27920.1	54.386	114	52	0	10	123	12	125	2.49e-42	147
Msa0389880	AT1G79180.2	45.963	161	54	1	2	129	4	164	3.31e-42	149
Msa0389880	AT1G48000.1	49.315	146	71	2	11	154	31	175	3.78e-41	144
Msa0389880	AT2G32460.1	56.481	108	47	0	10	117	16	123	2.00e-40	148
Msa0389880	AT4G13480.1	51.220	123	60	0	13	135	7	129	2.08e-40	142
Msa0389880	AT2G32460.2	56.481	108	47	0	10	117	4	111	2.14e-40	148
Msa0389880	AT4G26930.1	57.944	107	45	0	12	118	19	125	2.31e-40	146
Msa0389880	AT5G06100.1	58.491	106	44	0	12	117	32	137	4.84e-40	146
Msa0389880	AT5G06100.5	58.491	106	44	0	12	117	32	137	1.69e-39	146
Msa0389880	AT5G06100.2	58.491	106	44	0	12	117	32	137	1.69e-39	146
Msa0389880	AT5G06100.3	58.491	106	44	0	12	117	32	137	1.69e-39	146
Msa0389880	AT5G06100.4	58.491	106	44	0	12	117	32	137	1.69e-39	146
Msa0389880	AT3G30210.1	39.720	214	109	5	13	216	28	231	1.69e-39	140
Msa0389880	AT1G68320.1	56.881	109	47	0	10	118	17	125	2.21e-39	140
Msa0389880	AT3G24310.1	56.757	111	48	0	13	123	19	129	3.99e-39	139
Msa0389880	AT5G55020.1	55.140	107	48	0	12	118	26	132	6.41e-39	144
Msa0389880	AT3G11440.2	55.660	106	47	0	12	117	41	146	1.63e-38	142
Msa0389880	AT2G47190.1	46.923	130	68	1	12	140	20	149	3.87e-38	137
Msa0389880	AT2G26960.1	42.384	151	73	1	9	145	17	167	4.29e-38	140
Msa0389880	AT3G11440.3	52.586	116	55	0	2	117	31	146	7.54e-38	142
Msa0389880	AT3G11440.4	52.586	116	55	0	2	117	31	146	7.54e-38	142
Msa0389880	AT3G11440.1	52.586	116	55	0	2	117	31	146	7.54e-38	142
Msa0389880	AT1G25340.1	45.455	143	73	2	13	154	19	157	3.46e-37	135
Msa0389880	AT5G26660.2	51.181	127	52	3	39	164	8	125	5.04e-37	135
Msa0389880	AT3G06490.1	57.658	111	47	0	8	118	15	125	6.44e-36	132
Msa0389880	AT5G59780.3	50.467	107	53	0	9	115	5	111	5.12e-34	125
Msa0389880	AT3G27810.2	44.138	145	73	2	45	185	4	144	5.16e-34	123
Msa0389880	AT1G66370.1	45.113	133	63	1	10	132	6	138	6.33e-34	125
Msa0389880	AT5G49620.1	56.364	110	48	0	9	118	23	132	7.84e-34	127
Msa0389880	AT3G53200.1	50.467	107	53	0	9	115	6	112	9.28e-33	122
Msa0389880	AT3G46130.1	50.485	103	51	0	13	115	10	112	1.07e-32	122
Msa0389880	AT1G25340.2	43.357	143	71	3	13	154	19	152	2.93e-32	122
Msa0389880	AT3G60460.1	47.321	112	58	1	7	117	6	117	3.15e-32	122
Msa0389880	AT1G25340.3	43.357	143	71	3	13	154	19	152	3.92e-32	122
Msa0389880	AT5G40350.2	59.783	92	35	1	45	134	5	96	4.11e-32	118
Msa0389880	AT1G66380.1	52.885	104	49	0	12	115	8	111	2.71e-31	115
Msa0389880	AT3G47600.2	55.556	99	40	1	24	122	22	116	3.44e-31	120
Msa0389880	AT5G35550.2	62.500	80	30	0	45	124	50	129	1.18e-30	117
Msa0389880	AT1G66390.1	51.887	106	51	0	10	115	6	111	1.60e-30	116
Msa0389880	AT1G56650.1	51.923	104	50	0	12	115	8	111	2.14e-30	116
Msa0389880	AT2G26950.1	42.241	116	64	1	9	124	13	125	2.17e-30	119
Msa0389880	AT5G49620.2	50.000	124	48	1	9	118	23	146	2.50e-30	117
Msa0389880	AT5G14750.3	63.768	69	25	0	48	116	18	86	1.04e-28	109
Msa0389880	AT3G12820.2	67.606	71	23	0	48	118	2	72	2.13e-28	109
Msa0389880	AT3G46130.3	62.500	72	27	0	44	115	9	80	8.26e-28	108
Msa0389880	AT5G59780.2	61.644	73	28	0	43	115	18	90	8.73e-28	108
Msa0389880	AT1G69560.1	47.154	123	60	3	3	122	94	214	1.37e-27	110
Msa0389880	AT3G46130.4	61.644	73	28	0	43	115	18	90	1.75e-27	108
Msa0389880	AT1G69560.2	47.154	123	60	3	3	122	110	230	1.85e-27	110
Msa0389880	AT3G27785.1	42.241	116	66	1	12	127	187	301	4.00e-26	108
Msa0389880	AT5G58850.1	46.078	102	54	1	14	115	105	205	5.60e-26	107
Msa0389880	AT5G11050.1	36.943	157	92	3	10	160	101	256	7.23e-26	107
Msa0389880	AT1G26780.1	47.321	112	56	2	12	122	96	205	1.91e-25	103
Msa0389880	AT3G53200.2	58.904	73	30	0	43	115	7	79	2.05e-25	101
Msa0389880	AT1G26780.2	47.321	112	56	2	12	122	96	205	2.47e-25	105
Msa0389880	AT5G40360.1	32.086	187	117	5	12	195	156	335	2.84e-25	104
Msa0389880	AT1G17950.1	45.045	111	60	1	14	124	5	114	1.06e-24	100
Msa0389880	AT3G50060.1	48.039	102	52	1	14	115	6	106	1.37e-24	101
Msa0389880	AT4G18770.1	42.241	116	64	2	14	127	217	331	1.88e-24	103
Msa0389880	AT4G37260.1	49.074	108	53	2	8	115	8	113	2.20e-24	101
Msa0389880	AT5G02320.1	48.544	103	52	1	14	116	127	228	2.74e-24	103
Msa0389880	AT5G02320.2	48.544	103	52	1	14	116	127	228	2.74e-24	103
Msa0389880	AT5G02320.3	48.544	103	52	1	14	116	67	168	3.76e-24	103
Msa0389880	AT2G39880.1	48.598	107	53	2	9	115	46	150	3.88e-24	101
Msa0389880	AT5G67300.1	49.020	102	51	1	14	115	6	106	5.55e-24	100
Msa0389880	AT2G23290.1	50.980	102	49	1	14	115	13	113	7.17e-24	100
Msa0389880	AT3G55730.1	49.533	107	52	2	9	115	52	156	1.03e-23	100
Msa0389880	AT3G29020.1	42.202	109	62	1	14	122	65	172	2.84e-23	96.7
Msa0389880	AT3G09370.2	48.039	102	52	1	14	115	135	235	3.54e-23	100
Msa0389880	AT3G09370.1	48.039	102	52	1	14	115	130	230	3.74e-23	100
Msa0389880	AT3G29020.2	42.202	109	62	1	14	122	67	174	4.15e-23	97.8
Msa0389880	AT3G09370.3	48.039	102	52	1	14	115	143	243	4.54e-23	100
Msa0389880	AT3G09230.1	46.602	103	54	1	14	116	55	156	5.97e-23	99.0
Msa0389880	AT4G33450.1	38.686	137	80	2	13	149	18	150	6.48e-23	96.3
Msa0389880	AT1G66380.3	59.155	71	29	0	45	115	8	78	7.04e-23	92.0
Msa0389880	AT5G11510.3	37.931	145	82	3	14	158	81	217	1.60e-22	99.0
Msa0389880	AT5G11510.1	37.931	145	82	3	14	158	81	217	1.60e-22	99.0
Msa0389880	AT5G11510.4	37.931	145	82	3	14	158	81	217	1.60e-22	99.0
Msa0389880	AT5G11510.5	37.931	145	82	3	14	158	81	217	1.65e-22	99.0
Msa0389880	AT5G11510.2	37.931	145	82	3	14	158	81	217	1.72e-22	99.0
Msa0389880	AT1G22640.3	66.102	59	20	0	58	116	1	59	2.80e-22	93.2
Msa0389880	AT3G23250.2	57.143	70	30	0	58	127	1	70	3.69e-22	93.6
Msa0389880	AT1G73410.1	45.794	107	57	1	14	120	6	111	3.80e-22	94.0
Msa0389880	AT5G17800.1	41.176	119	69	1	1	119	80	197	4.32e-22	95.5
Msa0389880	AT1G73410.2	45.370	108	58	1	14	121	6	112	9.50e-22	91.7
Msa0389880	AT4G32730.5	44.660	103	56	1	14	116	87	188	1.15e-21	96.7
Msa0389880	AT4G32730.4	44.660	103	56	1	14	116	87	188	1.15e-21	96.7
Msa0389880	AT4G32730.3	44.660	103	56	1	14	116	87	188	1.15e-21	96.7
Msa0389880	AT4G32730.2	44.660	103	56	1	14	116	87	188	1.15e-21	96.7
Msa0389880	AT4G32730.1	44.660	103	56	1	14	116	87	188	1.35e-21	96.3
Msa0389880	AT1G18960.1	43.137	102	51	4	17	116	13	109	1.94e-21	93.2
Msa0389880	AT5G14750.4	57.627	59	25	0	58	116	1	59	7.07e-20	85.1
Msa0389880	AT5G14750.2	57.627	59	25	0	58	116	1	59	7.07e-20	85.1
Msa0389880	AT2G25230.1	37.615	109	66	2	17	125	29	135	1.12e-19	87.0
Msa0389880	AT1G66380.2	41.584	101	58	1	8	107	4	104	1.37e-19	83.2
Msa0389880	AT1G71030.2	48.529	68	35	0	51	118	5	72	2.23e-19	84.7
Msa0389880	AT1G71030.1	48.529	68	35	0	51	118	19	86	2.86e-19	84.7
Msa0389880	AT2G02820.3	36.697	109	68	1	17	125	33	140	7.06e-19	86.3
Msa0389880	AT2G02820.1	36.697	109	68	1	17	125	33	140	7.45e-19	87.4
Msa0389880	AT2G02820.2	36.697	109	68	1	17	125	33	140	1.25e-18	87.0
Msa0389880	AT5G39700.1	38.596	114	69	1	9	122	51	163	3.90e-18	81.6
Msa0389880	AT2G37630.1	36.434	129	78	2	14	140	4	130	4.02e-18	84.7
Msa0389880	AT1G14350.2	40.594	101	59	1	17	117	28	127	6.80e-18	84.7
Msa0389880	AT1G14350.1	40.594	101	59	1	17	117	28	127	6.80e-18	84.7
Msa0389880	AT4G00540.2	40.741	108	60	2	12	116	101	207	3.95e-17	82.0
Msa0389880	AT4G00540.1	40.741	108	60	2	12	116	99	205	6.46e-17	81.6
Msa0389880	AT5G40430.1	32.456	114	74	3	12	125	52	162	3.48e-15	74.7
Msa0389880	AT5G59780.1	57.143	49	21	0	70	118	1	49	2.24e-13	67.8
Msa0389880	AT3G46130.2	57.143	49	21	0	70	118	1	49	4.26e-13	67.4
Msa0389880	AT4G25560.2	58.824	51	21	0	71	121	3	53	7.12e-13	67.4
Msa0389880	AT3G28910.2	61.905	42	16	0	77	118	1	42	1.96e-11	63.9
Msa0389880	AT1G14350.3	43.548	62	35	0	56	117	23	84	2.29e-11	64.7
Msa0389880	AT1G14350.4	43.548	62	35	0	56	117	23	84	2.29e-11	64.7
Msa0389880	AT1G74650.3	65.000	40	14	0	77	116	1	40	2.70e-11	63.5

Find 81 sgRNAs with CRISPR-Local

Find 248 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TGAGATGGATAAATTATTTA+AGG	0.191741	3_2:-424482	Msa0389880:CDS
GTAATTATCTAGTTGATTAA+TGG	0.205543	3_2:+423695	None:intergenic
AGGACATGTTGATGAAAATA+AGG	0.261958	3_2:+423638	None:intergenic
GGAAAAGGAGAAAGTGAATT+AGG	0.280326	3_2:+423156	None:intergenic
ATAGTTGGTGTTGATAAATT+AGG	0.292324	3_2:+423756	None:intergenic
CTACCCATGGTTATGGTTGC+TGG	0.319015	3_2:-424669	Msa0389880:CDS
ATGAGTTTCTCATCTTCTTC+AGG	0.319747	3_2:+424703	None:intergenic
TCAAGTGCAATCTTGTAATA+TGG	0.345859	3_2:-423355	Msa0389880:CDS
AAAAGATGTATTCGATCATT+TGG	0.349983	3_2:-422837	Msa0389880:three_prime_UTR
AACCTTCCTCTTCTAATATC+AGG	0.359507	3_2:+424459	None:intergenic
TCATGATGGAATAGTACTTC+TGG	0.366082	3_2:+423552	None:intergenic
CAAATAACCTTTCCTTCTAC+AGG	0.382480	3_2:+422881	None:intergenic
TTCATGGGGTTGTTGGCAAC+AGG	0.386838	3_2:-424404	Msa0389880:intron
TACATTACTACCCATGGTTA+TGG	0.388826	3_2:-424676	Msa0389880:CDS
GTAGCAAGCTCTTCCTAGTT+AGG	0.390166	3_2:+423067	None:intergenic
AAGTTAATTATAAGCCTTCA+TGG	0.404335	3_2:-424420	Msa0389880:CDS
GGTACCAAACTCATCACATA+TGG	0.406647	3_2:-423184	Msa0389880:CDS
TCCACATTATTCTCTATCAA+TGG	0.410595	3_2:+423399	None:intergenic
GGAGAGTGTTGAAGGACAAA+TGG	0.424251	3_2:-423226	Msa0389880:CDS
ATAATTAACTTCTCCTCCTC+AGG	0.429297	3_2:+424432	None:intergenic
ATAAGCCTTCATGGGGTTGT+TGG	0.433560	3_2:-424411	Msa0389880:CDS
AGGAGGAGAGTTATTAACAT+TGG	0.435772	3_2:-423325	Msa0389880:CDS
CCATGATCATCATCAAGTTC+AGG	0.438689	3_2:-423490	Msa0389880:CDS
TTCAGCTGGGAGAGTGTTGA+AGG	0.456330	3_2:-423234	Msa0389880:CDS
AAGAGACACAAATGTTGAAA+AGG	0.464207	3_2:+422762	None:intergenic
AGGCGATTGAAACCTGTAGA+AGG	0.468057	3_2:-422893	Msa0389880:three_prime_UTR
GACAAGAAGAGTTGAATGAA+TGG	0.469944	3_2:-423290	Msa0389880:CDS
CTTGTGTCAAACATAAATAA+AGG	0.479629	3_2:+423618	None:intergenic
AAGTGCAGACCAGCTTTCTC+AGG	0.484684	3_2:+424637	None:intergenic
TTATCTCATAATAGTGAAGA+AGG	0.486146	3_2:+423135	None:intergenic
GTTCCCATATGTGATGAGTT+TGG	0.488784	3_2:+423180	None:intergenic
CACATTGCAAGCCACTTGCC+TGG	0.495527	3_2:-423855	Msa0389880:CDS
TCTGTTGATTGCAGCATGAA+TGG	0.499140	3_2:+424749	None:intergenic
AGTTAATTATAAGCCTTCAT+GGG	0.499739	3_2:-424419	Msa0389880:CDS
TACTTCTGGTCTTATTACAT+TGG	0.506573	3_2:+423566	None:intergenic
ATTTCATTGTCTGTTCTACC+AGG	0.510091	3_2:+423837	None:intergenic
AAAGCTATTGCAGCTGGATG+AGG	0.510638	3_2:+423459	None:intergenic
GGGAGGTGAAGAACAAGTAC+TGG	0.518630	3_2:-423205	Msa0389880:CDS
AGAAGGTTAAGAGAGGCCTT+TGG	0.525448	3_2:-424729	Msa0389880:CDS
GTTGTAAAAGCTATTGCAGC+TGG	0.529157	3_2:+423453	None:intergenic
CATAATAGTGAAGAAGGAAA+AGG	0.531961	3_2:+423141	None:intergenic
ACAAGAAGAGTTGAATGAAT+GGG	0.537109	3_2:-423289	Msa0389880:CDS
GCTATTGCAGCTGGATGAGG+AGG	0.542899	3_2:+423462	None:intergenic
GTAATAACTAGAGAGAAAGA+TGG	0.543659	3_2:-424776	Msa0389880:exon
GAGAGTGTTGAAGGACAAAT+GGG	0.544217	3_2:-423225	Msa0389880:CDS
TTAATTATATCTACCTAACT+AGG	0.549785	3_2:-423080	Msa0389880:three_prime_UTR
CATCTTCTTCAGGTGACCAA+AGG	0.550800	3_2:+424713	None:intergenic
ACATTATTCTCTATCAATGG+TGG	0.555492	3_2:+423402	None:intergenic
GCAATCTTGTAATATGGATG+AGG	0.555592	3_2:-423349	Msa0389880:CDS
AGTGAAGTTCCTGAGAAAGC+TGG	0.559248	3_2:-424646	Msa0389880:intron
ATTAGATACATTACTACCCA+TGG	0.561662	3_2:-424682	Msa0389880:CDS
TAATAACTAGAGAGAAAGAT+GGG	0.568512	3_2:-424775	Msa0389880:exon
TTAAACTCACAGAATCATGA+TGG	0.568777	3_2:+423538	None:intergenic
TGTAATATGGATGAGGAAGG+AGG	0.573816	3_2:-423342	Msa0389880:CDS
TGTCTGTTCTACCAGGCAAG+TGG	0.576295	3_2:+423844	None:intergenic
GTACCAAACTCATCACATAT+GGG	0.577270	3_2:-423183	Msa0389880:CDS
CACTCCAGCAACCATAACCA+TGG	0.585135	3_2:+424665	None:intergenic
GTTAATTATAAGCCTTCATG+GGG	0.585238	3_2:-424418	Msa0389880:CDS
AAGAGGAAGGTTTACACCTG+AGG	0.591737	3_2:-424448	Msa0389880:CDS
CCTGAACTTGATGATGATCA+TGG	0.595567	3_2:+423490	None:intergenic
GTAAGAGTTGTAGATTGAGA+TGG	0.595760	3_2:-424497	Msa0389880:CDS
TGATGATGATGATCAATAGT+TGG	0.596624	3_2:+423741	None:intergenic
ATTGAAACCTGTAGAAGGAA+AGG	0.599497	3_2:-422888	Msa0389880:three_prime_UTR
TTAAGGCCTGATATTAGAAG+AGG	0.608039	3_2:-424465	Msa0389880:CDS
TGAGTTTAAGTTCTGACACA+TGG	0.610610	3_2:-423524	Msa0389880:CDS
TGTTGCCAACAACCCCATGA+AGG	0.617109	3_2:+424406	None:intergenic
TCCCAGCTGAAAATAAAGCT+AGG	0.619685	3_2:+423246	None:intergenic
TCTTGTAATATGGATGAGGA+AGG	0.621073	3_2:-423345	Msa0389880:CDS
AGGAAGGTTTACACCTGAGG+AGG	0.624953	3_2:-424445	Msa0389880:CDS
AGAAGAGTTGAATGAATGGG+TGG	0.627654	3_2:-423286	Msa0389880:CDS
ACCATTGATAGAGAATAATG+TGG	0.633578	3_2:-423400	Msa0389880:CDS
GAATAATGTGGAAAACAGCA+TGG	0.636117	3_2:-423388	Msa0389880:CDS
TTCATGCTGCAATCAACAGA+AGG	0.642237	3_2:-424746	Msa0389880:CDS
GGCCTGATATTAGAAGAGGA+AGG	0.643800	3_2:-424461	Msa0389880:CDS
ACTCCAGCAACCATAACCAT+GGG	0.652656	3_2:+424666	None:intergenic
TATTTGACTGTACAAAGTGG+TGG	0.654421	3_2:-422814	Msa0389880:three_prime_UTR
AGTGTTGAAGGACAAATGGG+AGG	0.655479	3_2:-423222	Msa0389880:CDS
GAACTGTAATTGATCAACTG+AGG	0.702739	3_2:+423717	None:intergenic
AATCAACAGAAGGTTAAGAG+AGG	0.703939	3_2:-424736	Msa0389880:CDS
TGGTATTTGACTGTACAAAG+TGG	0.732730	3_2:-422817	Msa0389880:three_prime_UTR
GTATATGTATATGTATAACG+AGG	0.736573	3_2:-422979	Msa0389880:three_prime_UTR

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTCTATATATTTTGTTTTTC+AGG	-	chr3_2:423092-423111	Msa0389880:three_prime_UTR	15.0%
!!!	TCTATATATTTTGTTTTTCA+GGG	-	chr3_2:423093-423112	Msa0389880:three_prime_UTR	15.0%
!!	ACAATGAAATAAAAAACTAT+TGG	-	chr3_2:423802-423821	Msa0389880:CDS	15.0%
!!	AGAAAGAGAAAAAAAAATAA+AGG	-	chr3_2:424713-424732	Msa0389880:CDS	15.0%
!!!	TTTTTCTTGAATGATAATAA+TGG	-	chr3_2:424836-424855	Msa0389880:five_prime_UTR	15.0%
!!!	TTTTCTTGAATGATAATAAT+GGG	-	chr3_2:424837-424856	Msa0389880:five_prime_UTR	15.0%
!!!	TTCTATATATTTTGTTTTTC+AGG	-	chr3_2:423092-423111	Msa0389880:three_prime_UTR	15.0%
!!!	TCTATATATTTTGTTTTTCA+GGG	-	chr3_2:423093-423112	Msa0389880:three_prime_UTR	15.0%
!!	ACAATGAAATAAAAAACTAT+TGG	-	chr3_2:423802-423821	Msa0389880:CDS	15.0%
!!	AGAAAGAGAAAAAAAAATAA+AGG	-	chr3_2:424713-424732	Msa0389880:CDS	15.0%
!!!	TTTTTCTTGAATGATAATAA+TGG	-	chr3_2:424836-424855	Msa0389880:five_prime_UTR	15.0%
!!!	TTTTCTTGAATGATAATAAT+GGG	-	chr3_2:424837-424856	Msa0389880:five_prime_UTR	15.0%
!!	TGAGATGGATAAATTATTTA+AGG	-	chr3_2:423144-423163	Msa0389880:CDS	20.0%
!!	AATGATTCAAATTGCTTAAT+TGG	+	chr3_2:423280-423299	None:intergenic	20.0%
!!	TTTATTCCAGATTTATCAAA+GGG	+	chr3_2:423341-423360	None:intergenic	20.0%
!!	ATTTATTCCAGATTTATCAA+AGG	+	chr3_2:423342-423361	None:intergenic	20.0%
!!!	AAAAGCATCATATCAATATT+AGG	-	chr3_2:423364-423383	Msa0389880:CDS	20.0%
!!	ATCAATATTAGGTAAAGAAA+TGG	-	chr3_2:423375-423394	Msa0389880:CDS	20.0%
!!	ATTTATTAATGAAGCAATCT+TGG	-	chr3_2:423483-423502	Msa0389880:CDS	20.0%
!!	AAATGTATGCTTATAAATCA+CGG	-	chr3_2:423659-423678	Msa0389880:CDS	20.0%
!!	TAAAAAACTATTGGAATTCA+TGG	-	chr3_2:423811-423830	Msa0389880:CDS	20.0%
!!	GTAATTATCTAGTTGATTAA+TGG	+	chr3_2:423934-423953	None:intergenic	20.0%
!!	TTAATTATATCTACCTAACT+AGG	-	chr3_2:424546-424565	Msa0389880:intron	20.0%
!!	TGAGATGGATAAATTATTTA+AGG	-	chr3_2:423144-423163	Msa0389880:CDS	20.0%
!!	AATGATTCAAATTGCTTAAT+TGG	+	chr3_2:423280-423299	None:intergenic	20.0%
!!	TTTATTCCAGATTTATCAAA+GGG	+	chr3_2:423341-423360	None:intergenic	20.0%
!!	ATTTATTCCAGATTTATCAA+AGG	+	chr3_2:423342-423361	None:intergenic	20.0%
!!!	AAAAGCATCATATCAATATT+AGG	-	chr3_2:423364-423383	Msa0389880:CDS	20.0%
!!	ATCAATATTAGGTAAAGAAA+TGG	-	chr3_2:423375-423394	Msa0389880:CDS	20.0%
!!	ATTTATTAATGAAGCAATCT+TGG	-	chr3_2:423483-423502	Msa0389880:CDS	20.0%
!!	AAATGTATGCTTATAAATCA+CGG	-	chr3_2:423659-423678	Msa0389880:CDS	20.0%
!!	TAAAAAACTATTGGAATTCA+TGG	-	chr3_2:423811-423830	Msa0389880:CDS	20.0%
!!	GTAATTATCTAGTTGATTAA+TGG	+	chr3_2:423934-423953	None:intergenic	20.0%
!!	TTAATTATATCTACCTAACT+AGG	-	chr3_2:424546-424565	Msa0389880:intron	20.0%
!	TTTACTAAAGAAAAAGAGAC+AGG	-	chr3_2:422805-422824	Msa0389880:three_prime_UTR	25.0%
!	TAATAACTAGAGAGAAAGAT+GGG	-	chr3_2:422851-422870	Msa0389880:three_prime_UTR	25.0%
!	AAGTTAATTATAAGCCTTCA+TGG	-	chr3_2:423206-423225	Msa0389880:CDS	25.0%
!	AGTTAATTATAAGCCTTCAT+GGG	-	chr3_2:423207-423226	Msa0389880:CDS	25.0%
!	AAATCCATATTACACAACAA+GGG	+	chr3_2:423303-423322	None:intergenic	25.0%
!	AAAATCCATATTACACAACA+AGG	+	chr3_2:423304-423323	None:intergenic	25.0%
!!	TGTTGTGTAATATGGATTTT+TGG	-	chr3_2:423304-423323	Msa0389880:CDS	25.0%
!	TATATTTGTGAATAGTAGCT+AGG	-	chr3_2:423406-423425	Msa0389880:CDS	25.0%
!!!	AATTTTGTTGGTTGTGAAAA+AGG	+	chr3_2:423621-423640	None:intergenic	25.0%
!!	AAACATGACTAGAATTTTGT+TGG	+	chr3_2:423633-423652	None:intergenic	25.0%
!	TCATATATATACAATGCAGA+TGG	-	chr3_2:423745-423764	Msa0389880:CDS	25.0%
!	CATATATATACAATGCAGAT+GGG	-	chr3_2:423746-423765	Msa0389880:CDS	25.0%
!!!	ATAGTTGGTGTTGATAAATT+AGG	+	chr3_2:423873-423892	None:intergenic	25.0%
!!!	CTTTTGTTGTTACATTTTCT+TGG	+	chr3_2:423965-423984	None:intergenic	25.0%
!	CTTGTGTCAAACATAAATAA+AGG	+	chr3_2:424011-424030	None:intergenic	25.0%
!	TTATCTCATAATAGTGAAGA+AGG	+	chr3_2:424494-424513	None:intergenic	25.0%
!	GTATATGTATATGTATAACG+AGG	-	chr3_2:424647-424666	Msa0389880:CDS	25.0%
!	AAAAGATGTATTCGATCATT+TGG	-	chr3_2:424789-424808	Msa0389880:five_prime_UTR	25.0%
!	TTTACTAAAGAAAAAGAGAC+AGG	-	chr3_2:422805-422824	Msa0389880:three_prime_UTR	25.0%
!	TAATAACTAGAGAGAAAGAT+GGG	-	chr3_2:422851-422870	Msa0389880:three_prime_UTR	25.0%
!	AAGTTAATTATAAGCCTTCA+TGG	-	chr3_2:423206-423225	Msa0389880:CDS	25.0%
!	AGTTAATTATAAGCCTTCAT+GGG	-	chr3_2:423207-423226	Msa0389880:CDS	25.0%
!	AAATCCATATTACACAACAA+GGG	+	chr3_2:423303-423322	None:intergenic	25.0%
!	AAAATCCATATTACACAACA+AGG	+	chr3_2:423304-423323	None:intergenic	25.0%
!!	TGTTGTGTAATATGGATTTT+TGG	-	chr3_2:423304-423323	Msa0389880:CDS	25.0%
!	TATATTTGTGAATAGTAGCT+AGG	-	chr3_2:423406-423425	Msa0389880:CDS	25.0%
!!!	AATTTTGTTGGTTGTGAAAA+AGG	+	chr3_2:423621-423640	None:intergenic	25.0%
!!	AAACATGACTAGAATTTTGT+TGG	+	chr3_2:423633-423652	None:intergenic	25.0%
!	TCATATATATACAATGCAGA+TGG	-	chr3_2:423745-423764	Msa0389880:CDS	25.0%
!	CATATATATACAATGCAGAT+GGG	-	chr3_2:423746-423765	Msa0389880:CDS	25.0%
!!!	ATAGTTGGTGTTGATAAATT+AGG	+	chr3_2:423873-423892	None:intergenic	25.0%
!!!	CTTTTGTTGTTACATTTTCT+TGG	+	chr3_2:423965-423984	None:intergenic	25.0%
!	CTTGTGTCAAACATAAATAA+AGG	+	chr3_2:424011-424030	None:intergenic	25.0%
!	TTATCTCATAATAGTGAAGA+AGG	+	chr3_2:424494-424513	None:intergenic	25.0%
!	GTATATGTATATGTATAACG+AGG	-	chr3_2:424647-424666	Msa0389880:CDS	25.0%
!	AAAAGATGTATTCGATCATT+TGG	-	chr3_2:424789-424808	Msa0389880:five_prime_UTR	25.0%
	GTAATAACTAGAGAGAAAGA+TGG	-	chr3_2:422850-422869	Msa0389880:three_prime_UTR	30.0%
	ATTAGATACATTACTACCCA+TGG	-	chr3_2:422944-422963	Msa0389880:three_prime_UTR	30.0%
	GTTAATTATAAGCCTTCATG+GGG	-	chr3_2:423208-423227	Msa0389880:CDS	30.0%
	ATGAAACCCTTTGATAAATC+TGG	-	chr3_2:423332-423351	Msa0389880:CDS	30.0%
!	AACCTCCTAACTATAGTTTT+GGG	-	chr3_2:423525-423544	Msa0389880:CDS	30.0%
	TGCTAAACAAACACTGAAAA+CGG	+	chr3_2:423593-423612	None:intergenic	30.0%
!	TGATGATGATGATCAATAGT+TGG	+	chr3_2:423888-423907	None:intergenic	30.0%
!	TGTTGTTACATTTTCTTGGT+TGG	+	chr3_2:423961-423980	None:intergenic	30.0%
!	AGGACATGTTGATGAAAATA+AGG	+	chr3_2:423991-424010	None:intergenic	30.0%
!!	TACTTCTGGTCTTATTACAT+TGG	+	chr3_2:424063-424082	None:intergenic	30.0%
	TTAAACTCACAGAATCATGA+TGG	+	chr3_2:424091-424110	None:intergenic	30.0%
	ACATTATTCTCTATCAATGG+TGG	+	chr3_2:424227-424246	None:intergenic	30.0%
	ACCATTGATAGAGAATAATG+TGG	-	chr3_2:424226-424245	Msa0389880:intron	30.0%
	TCCACATTATTCTCTATCAA+TGG	+	chr3_2:424230-424249	None:intergenic	30.0%
	TCAAGTGCAATCTTGTAATA+TGG	-	chr3_2:424271-424290	Msa0389880:intron	30.0%
	ACAAGAAGAGTTGAATGAAT+GGG	-	chr3_2:424337-424356	Msa0389880:intron	30.0%
	CATAATAGTGAAGAAGGAAA+AGG	+	chr3_2:424488-424507	None:intergenic	30.0%
	ATCAGCAATCAAAAAAAGTG+TGG	+	chr3_2:424601-424620	None:intergenic	30.0%
!!!	CACTTTTTTTGATTGCTGAT+TGG	-	chr3_2:424601-424620	Msa0389880:intron	30.0%
!!!	TTTTGTTGAGTGTTTTGACA+AGG	-	chr3_2:424679-424698	Msa0389880:CDS	30.0%
	GTAATAACTAGAGAGAAAGA+TGG	-	chr3_2:422850-422869	Msa0389880:three_prime_UTR	30.0%
	ATTAGATACATTACTACCCA+TGG	-	chr3_2:422944-422963	Msa0389880:three_prime_UTR	30.0%
	GTTAATTATAAGCCTTCATG+GGG	-	chr3_2:423208-423227	Msa0389880:CDS	30.0%
	ATGAAACCCTTTGATAAATC+TGG	-	chr3_2:423332-423351	Msa0389880:CDS	30.0%
!	AACCTCCTAACTATAGTTTT+GGG	-	chr3_2:423525-423544	Msa0389880:CDS	30.0%
	TGCTAAACAAACACTGAAAA+CGG	+	chr3_2:423593-423612	None:intergenic	30.0%
!	TGATGATGATGATCAATAGT+TGG	+	chr3_2:423888-423907	None:intergenic	30.0%
!	TGTTGTTACATTTTCTTGGT+TGG	+	chr3_2:423961-423980	None:intergenic	30.0%
!	AGGACATGTTGATGAAAATA+AGG	+	chr3_2:423991-424010	None:intergenic	30.0%
!!	TACTTCTGGTCTTATTACAT+TGG	+	chr3_2:424063-424082	None:intergenic	30.0%
	TTAAACTCACAGAATCATGA+TGG	+	chr3_2:424091-424110	None:intergenic	30.0%
	ACATTATTCTCTATCAATGG+TGG	+	chr3_2:424227-424246	None:intergenic	30.0%
	ACCATTGATAGAGAATAATG+TGG	-	chr3_2:424226-424245	Msa0389880:intron	30.0%
	TCCACATTATTCTCTATCAA+TGG	+	chr3_2:424230-424249	None:intergenic	30.0%
	TCAAGTGCAATCTTGTAATA+TGG	-	chr3_2:424271-424290	Msa0389880:intron	30.0%
	ACAAGAAGAGTTGAATGAAT+GGG	-	chr3_2:424337-424356	Msa0389880:intron	30.0%
	CATAATAGTGAAGAAGGAAA+AGG	+	chr3_2:424488-424507	None:intergenic	30.0%
	ATCAGCAATCAAAAAAAGTG+TGG	+	chr3_2:424601-424620	None:intergenic	30.0%
!!!	CACTTTTTTTGATTGCTGAT+TGG	-	chr3_2:424601-424620	Msa0389880:intron	30.0%
!!!	TTTTGTTGAGTGTTTTGACA+AGG	-	chr3_2:424679-424698	Msa0389880:CDS	30.0%
	AATCAACAGAAGGTTAAGAG+AGG	-	chr3_2:422890-422909	Msa0389880:three_prime_UTR	35.0%
	ATGAGTTTCTCATCTTCTTC+AGG	+	chr3_2:422926-422945	None:intergenic	35.0%
	TACATTACTACCCATGGTTA+TGG	-	chr3_2:422950-422969	Msa0389880:three_prime_UTR	35.0%
!!!	TTTGTTTTTCAGGGCTTCAA+AGG	-	chr3_2:423102-423121	Msa0389880:three_prime_UTR	35.0%
	GTAAGAGTTGTAGATTGAGA+TGG	-	chr3_2:423129-423148	Msa0389880:exon	35.0%
	TTAAGGCCTGATATTAGAAG+AGG	-	chr3_2:423161-423180	Msa0389880:CDS	35.0%
	AACCTTCCTCTTCTAATATC+AGG	+	chr3_2:423170-423189	None:intergenic	35.0%
	ATAATTAACTTCTCCTCCTC+AGG	+	chr3_2:423197-423216	None:intergenic	35.0%
!	CATTCCCTTGTTGTGTAATA+TGG	-	chr3_2:423296-423315	Msa0389880:CDS	35.0%
	TTGAGCTATATCATGTAGCT+AGG	+	chr3_2:423432-423451	None:intergenic	35.0%
!	CAACCTCCTAACTATAGTTT+TGG	-	chr3_2:423524-423543	Msa0389880:CDS	35.0%
!!	ACCTCCTAACTATAGTTTTG+GGG	-	chr3_2:423526-423545	Msa0389880:CDS	35.0%
	ACTTCCCCAAAACTATAGTT+AGG	+	chr3_2:423533-423552	None:intergenic	35.0%
!!!	TAGTTTTGGGGAAGTTAAGA+TGG	-	chr3_2:423538-423557	Msa0389880:CDS	35.0%
	ATTTCATTGTCTGTTCTACC+AGG	+	chr3_2:423792-423811	None:intergenic	35.0%
	GAACTGTAATTGATCAACTG+AGG	+	chr3_2:423912-423931	None:intergenic	35.0%
!	TCATGATGGAATAGTACTTC+TGG	+	chr3_2:424077-424096	None:intergenic	35.0%
!	TGAGTTTAAGTTCTGACACA+TGG	-	chr3_2:424102-424121	Msa0389880:intron	35.0%
	GAATAATGTGGAAAACAGCA+TGG	-	chr3_2:424238-424257	Msa0389880:intron	35.0%
	GCAATCTTGTAATATGGATG+AGG	-	chr3_2:424277-424296	Msa0389880:intron	35.0%
	TCTTGTAATATGGATGAGGA+AGG	-	chr3_2:424281-424300	Msa0389880:intron	35.0%
	AGGAGGAGAGTTATTAACAT+TGG	-	chr3_2:424301-424320	Msa0389880:intron	35.0%
	GACAAGAAGAGTTGAATGAA+TGG	-	chr3_2:424336-424355	Msa0389880:intron	35.0%
!!!	TCCTAGCTTTATTTTCAGCT+GGG	-	chr3_2:424379-424398	Msa0389880:intron	35.0%
	GTACCAAACTCATCACATAT+GGG	-	chr3_2:424443-424462	Msa0389880:CDS	35.0%
	GGAAAAGGAGAAAGTGAATT+AGG	+	chr3_2:424473-424492	None:intergenic	35.0%
	ATTGAAACCTGTAGAAGGAA+AGG	-	chr3_2:424738-424757	Msa0389880:CDS	35.0%
	CAAATAACCTTTCCTTCTAC+AGG	+	chr3_2:424748-424767	None:intergenic	35.0%
	TGGTATTTGACTGTACAAAG+TGG	-	chr3_2:424809-424828	Msa0389880:five_prime_UTR	35.0%
	TATTTGACTGTACAAAGTGG+TGG	-	chr3_2:424812-424831	Msa0389880:five_prime_UTR	35.0%
	AATCAACAGAAGGTTAAGAG+AGG	-	chr3_2:422890-422909	Msa0389880:three_prime_UTR	35.0%
	ATGAGTTTCTCATCTTCTTC+AGG	+	chr3_2:422926-422945	None:intergenic	35.0%
	TACATTACTACCCATGGTTA+TGG	-	chr3_2:422950-422969	Msa0389880:three_prime_UTR	35.0%
!!!	TTTGTTTTTCAGGGCTTCAA+AGG	-	chr3_2:423102-423121	Msa0389880:three_prime_UTR	35.0%
	GTAAGAGTTGTAGATTGAGA+TGG	-	chr3_2:423129-423148	Msa0389880:exon	35.0%
	TTAAGGCCTGATATTAGAAG+AGG	-	chr3_2:423161-423180	Msa0389880:CDS	35.0%
	AACCTTCCTCTTCTAATATC+AGG	+	chr3_2:423170-423189	None:intergenic	35.0%
	ATAATTAACTTCTCCTCCTC+AGG	+	chr3_2:423197-423216	None:intergenic	35.0%
!	CATTCCCTTGTTGTGTAATA+TGG	-	chr3_2:423296-423315	Msa0389880:CDS	35.0%
	TTGAGCTATATCATGTAGCT+AGG	+	chr3_2:423432-423451	None:intergenic	35.0%
!	CAACCTCCTAACTATAGTTT+TGG	-	chr3_2:423524-423543	Msa0389880:CDS	35.0%
!!	ACCTCCTAACTATAGTTTTG+GGG	-	chr3_2:423526-423545	Msa0389880:CDS	35.0%
	ACTTCCCCAAAACTATAGTT+AGG	+	chr3_2:423533-423552	None:intergenic	35.0%
!!!	TAGTTTTGGGGAAGTTAAGA+TGG	-	chr3_2:423538-423557	Msa0389880:CDS	35.0%
	ATTTCATTGTCTGTTCTACC+AGG	+	chr3_2:423792-423811	None:intergenic	35.0%
	GAACTGTAATTGATCAACTG+AGG	+	chr3_2:423912-423931	None:intergenic	35.0%
!	TCATGATGGAATAGTACTTC+TGG	+	chr3_2:424077-424096	None:intergenic	35.0%
!	TGAGTTTAAGTTCTGACACA+TGG	-	chr3_2:424102-424121	Msa0389880:intron	35.0%
	GAATAATGTGGAAAACAGCA+TGG	-	chr3_2:424238-424257	Msa0389880:intron	35.0%
	GCAATCTTGTAATATGGATG+AGG	-	chr3_2:424277-424296	Msa0389880:intron	35.0%
	TCTTGTAATATGGATGAGGA+AGG	-	chr3_2:424281-424300	Msa0389880:intron	35.0%
	AGGAGGAGAGTTATTAACAT+TGG	-	chr3_2:424301-424320	Msa0389880:intron	35.0%
	GACAAGAAGAGTTGAATGAA+TGG	-	chr3_2:424336-424355	Msa0389880:intron	35.0%
!!!	TCCTAGCTTTATTTTCAGCT+GGG	-	chr3_2:424379-424398	Msa0389880:intron	35.0%
	GTACCAAACTCATCACATAT+GGG	-	chr3_2:424443-424462	Msa0389880:CDS	35.0%
	GGAAAAGGAGAAAGTGAATT+AGG	+	chr3_2:424473-424492	None:intergenic	35.0%
	ATTGAAACCTGTAGAAGGAA+AGG	-	chr3_2:424738-424757	Msa0389880:CDS	35.0%
	CAAATAACCTTTCCTTCTAC+AGG	+	chr3_2:424748-424767	None:intergenic	35.0%
	TGGTATTTGACTGTACAAAG+TGG	-	chr3_2:424809-424828	Msa0389880:five_prime_UTR	35.0%
	TATTTGACTGTACAAAGTGG+TGG	-	chr3_2:424812-424831	Msa0389880:five_prime_UTR	35.0%
!	TCTGTTGATTGCAGCATGAA+TGG	+	chr3_2:422880-422899	None:intergenic	40.0%
	TTCATGCTGCAATCAACAGA+AGG	-	chr3_2:422880-422899	Msa0389880:three_prime_UTR	40.0%
	AGCAATCTTGGTATCTCTGA+AGG	-	chr3_2:423495-423514	Msa0389880:CDS	40.0%
	TCCCCAAAACTATAGTTAGG+AGG	+	chr3_2:423530-423549	None:intergenic	40.0%
!!	CCTGAACTTGATGATGATCA+TGG	+	chr3_2:424139-424158	None:intergenic	40.0%
	CCATGATCATCATCAAGTTC+AGG	-	chr3_2:424136-424155	Msa0389880:intron	40.0%
	GTTGTAAAAGCTATTGCAGC+TGG	+	chr3_2:424176-424195	None:intergenic	40.0%
	TGTAATATGGATGAGGAAGG+AGG	-	chr3_2:424284-424303	Msa0389880:intron	40.0%
	AGAAGAGTTGAATGAATGGG+TGG	-	chr3_2:424340-424359	Msa0389880:intron	40.0%
!!!	GTCCTAGCTTTATTTTCAGC+TGG	-	chr3_2:424378-424397	Msa0389880:intron	40.0%
	TCCCAGCTGAAAATAAAGCT+AGG	+	chr3_2:424383-424402	None:intergenic	40.0%
!!	GAGAGTGTTGAAGGACAAAT+GGG	-	chr3_2:424401-424420	Msa0389880:intron	40.0%
	GGTACCAAACTCATCACATA+TGG	-	chr3_2:424442-424461	Msa0389880:CDS	40.0%
	GTTCCCATATGTGATGAGTT+TGG	+	chr3_2:424449-424468	None:intergenic	40.0%
!!!	TGAGTGTTTTGACAAGGAAG+AGG	-	chr3_2:424685-424704	Msa0389880:CDS	40.0%
!	TCTGTTGATTGCAGCATGAA+TGG	+	chr3_2:422880-422899	None:intergenic	40.0%
	TTCATGCTGCAATCAACAGA+AGG	-	chr3_2:422880-422899	Msa0389880:three_prime_UTR	40.0%
	AGCAATCTTGGTATCTCTGA+AGG	-	chr3_2:423495-423514	Msa0389880:CDS	40.0%
	TCCCCAAAACTATAGTTAGG+AGG	+	chr3_2:423530-423549	None:intergenic	40.0%
!!	CCTGAACTTGATGATGATCA+TGG	+	chr3_2:424139-424158	None:intergenic	40.0%
	CCATGATCATCATCAAGTTC+AGG	-	chr3_2:424136-424155	Msa0389880:intron	40.0%
	GTTGTAAAAGCTATTGCAGC+TGG	+	chr3_2:424176-424195	None:intergenic	40.0%
	TGTAATATGGATGAGGAAGG+AGG	-	chr3_2:424284-424303	Msa0389880:intron	40.0%
	AGAAGAGTTGAATGAATGGG+TGG	-	chr3_2:424340-424359	Msa0389880:intron	40.0%
!!!	GTCCTAGCTTTATTTTCAGC+TGG	-	chr3_2:424378-424397	Msa0389880:intron	40.0%
	TCCCAGCTGAAAATAAAGCT+AGG	+	chr3_2:424383-424402	None:intergenic	40.0%
!!	GAGAGTGTTGAAGGACAAAT+GGG	-	chr3_2:424401-424420	Msa0389880:intron	40.0%
	GGTACCAAACTCATCACATA+TGG	-	chr3_2:424442-424461	Msa0389880:CDS	40.0%
	GTTCCCATATGTGATGAGTT+TGG	+	chr3_2:424449-424468	None:intergenic	40.0%
!!!	TGAGTGTTTTGACAAGGAAG+AGG	-	chr3_2:424685-424704	Msa0389880:CDS	40.0%
	AGAAGGTTAAGAGAGGCCTT+TGG	-	chr3_2:422897-422916	Msa0389880:three_prime_UTR	45.0%
	CATCTTCTTCAGGTGACCAA+AGG	+	chr3_2:422916-422935	None:intergenic	45.0%
	ACTCCAGCAACCATAACCAT+GGG	+	chr3_2:422963-422982	None:intergenic	45.0%
	AGTGAAGTTCCTGAGAAAGC+TGG	-	chr3_2:422980-422999	Msa0389880:three_prime_UTR	45.0%
!!	TTTTCAGGGCTTCAAAGGTG+TGG	-	chr3_2:423107-423126	Msa0389880:three_prime_UTR	45.0%
	GGCCTGATATTAGAAGAGGA+AGG	-	chr3_2:423165-423184	Msa0389880:CDS	45.0%
	AAGAGGAAGGTTTACACCTG+AGG	-	chr3_2:423178-423197	Msa0389880:CDS	45.0%
	ATAAGCCTTCATGGGGTTGT+TGG	-	chr3_2:423215-423234	Msa0389880:CDS	45.0%
	AAAGCTATTGCAGCTGGATG+AGG	+	chr3_2:424170-424189	None:intergenic	45.0%
!!	GGAGAGTGTTGAAGGACAAA+TGG	-	chr3_2:424400-424419	Msa0389880:intron	45.0%
!	AGTGTTGAAGGACAAATGGG+AGG	-	chr3_2:424404-424423	Msa0389880:intron	45.0%
	GTAGCAAGCTCTTCCTAGTT+AGG	+	chr3_2:424562-424581	None:intergenic	45.0%
	AGGCGATTGAAACCTGTAGA+AGG	-	chr3_2:424733-424752	Msa0389880:CDS	45.0%
	AGAAGGTTAAGAGAGGCCTT+TGG	-	chr3_2:422897-422916	Msa0389880:three_prime_UTR	45.0%
	CATCTTCTTCAGGTGACCAA+AGG	+	chr3_2:422916-422935	None:intergenic	45.0%
	ACTCCAGCAACCATAACCAT+GGG	+	chr3_2:422963-422982	None:intergenic	45.0%
	AGTGAAGTTCCTGAGAAAGC+TGG	-	chr3_2:422980-422999	Msa0389880:three_prime_UTR	45.0%
!!	TTTTCAGGGCTTCAAAGGTG+TGG	-	chr3_2:423107-423126	Msa0389880:three_prime_UTR	45.0%
	GGCCTGATATTAGAAGAGGA+AGG	-	chr3_2:423165-423184	Msa0389880:CDS	45.0%
	AAGAGGAAGGTTTACACCTG+AGG	-	chr3_2:423178-423197	Msa0389880:CDS	45.0%
	ATAAGCCTTCATGGGGTTGT+TGG	-	chr3_2:423215-423234	Msa0389880:CDS	45.0%
	AAAGCTATTGCAGCTGGATG+AGG	+	chr3_2:424170-424189	None:intergenic	45.0%
!!	GGAGAGTGTTGAAGGACAAA+TGG	-	chr3_2:424400-424419	Msa0389880:intron	45.0%
!	AGTGTTGAAGGACAAATGGG+AGG	-	chr3_2:424404-424423	Msa0389880:intron	45.0%
	GTAGCAAGCTCTTCCTAGTT+AGG	+	chr3_2:424562-424581	None:intergenic	45.0%
	AGGCGATTGAAACCTGTAGA+AGG	-	chr3_2:424733-424752	Msa0389880:CDS	45.0%
	CTACCCATGGTTATGGTTGC+TGG	-	chr3_2:422957-422976	Msa0389880:three_prime_UTR	50.0%
	CACTCCAGCAACCATAACCA+TGG	+	chr3_2:422964-422983	None:intergenic	50.0%
	AAGTGCAGACCAGCTTTCTC+AGG	+	chr3_2:422992-423011	None:intergenic	50.0%
	AGGAAGGTTTACACCTGAGG+AGG	-	chr3_2:423181-423200	Msa0389880:CDS	50.0%
	TGTTGCCAACAACCCCATGA+AGG	+	chr3_2:423223-423242	None:intergenic	50.0%
	TTCATGGGGTTGTTGGCAAC+AGG	-	chr3_2:423222-423241	Msa0389880:CDS	50.0%
	TGTCTGTTCTACCAGGCAAG+TGG	+	chr3_2:423785-423804	None:intergenic	50.0%
!!	TTCAGCTGGGAGAGTGTTGA+AGG	-	chr3_2:424392-424411	Msa0389880:intron	50.0%
	GGGAGGTGAAGAACAAGTAC+TGG	-	chr3_2:424421-424440	Msa0389880:CDS	50.0%
	CTACCCATGGTTATGGTTGC+TGG	-	chr3_2:422957-422976	Msa0389880:three_prime_UTR	50.0%
	CACTCCAGCAACCATAACCA+TGG	+	chr3_2:422964-422983	None:intergenic	50.0%
	AAGTGCAGACCAGCTTTCTC+AGG	+	chr3_2:422992-423011	None:intergenic	50.0%
	AGGAAGGTTTACACCTGAGG+AGG	-	chr3_2:423181-423200	Msa0389880:CDS	50.0%
	TGTTGCCAACAACCCCATGA+AGG	+	chr3_2:423223-423242	None:intergenic	50.0%
	TTCATGGGGTTGTTGGCAAC+AGG	-	chr3_2:423222-423241	Msa0389880:CDS	50.0%
	TGTCTGTTCTACCAGGCAAG+TGG	+	chr3_2:423785-423804	None:intergenic	50.0%
!!	TTCAGCTGGGAGAGTGTTGA+AGG	-	chr3_2:424392-424411	Msa0389880:intron	50.0%
	GGGAGGTGAAGAACAAGTAC+TGG	-	chr3_2:424421-424440	Msa0389880:CDS	50.0%
	CACATTGCAAGCCACTTGCC+TGG	-	chr3_2:423771-423790	Msa0389880:CDS	55.0%
	GCTATTGCAGCTGGATGAGG+AGG	+	chr3_2:424167-424186	None:intergenic	55.0%
	CACATTGCAAGCCACTTGCC+TGG	-	chr3_2:423771-423790	Msa0389880:CDS	55.0%
	GCTATTGCAGCTGGATGAGG+AGG	+	chr3_2:424167-424186	None:intergenic	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr3_2	gene	422774	424874	422774	ID=Msa0389880;Name=Msa0389880
chr3_2	mRNA	422774	424874	422774	ID=Msa0389880-mRNA-1;Parent=Msa0389880;Name=Msa0389880-mRNA-1;_AED=0.04;_eAED=0.04;_QI=95\|1\|1\|1\|1\|1\|3\|366\|335
chr3_2	exon	422774	423884	422774	ID=Msa0389880-mRNA-1:exon:58;Parent=Msa0389880-mRNA-1
chr3_2	exon	424405	424534	424405	ID=Msa0389880-mRNA-1:exon:57;Parent=Msa0389880-mRNA-1
chr3_2	exon	424647	424874	424647	ID=Msa0389880-mRNA-1:exon:56;Parent=Msa0389880-mRNA-1
chr3_2	five_prime_UTR	424780	424874	424780	ID=Msa0389880-mRNA-1:five_prime_utr;Parent=Msa0389880-mRNA-1
chr3_2	CDS	424647	424779	424647	ID=Msa0389880-mRNA-1:cds;Parent=Msa0389880-mRNA-1
chr3_2	CDS	424405	424534	424405	ID=Msa0389880-mRNA-1:cds;Parent=Msa0389880-mRNA-1
chr3_2	CDS	423140	423884	423140	ID=Msa0389880-mRNA-1:cds;Parent=Msa0389880-mRNA-1
chr3_2	three_prime_UTR	422774	423139	422774	ID=Msa0389880-mRNA-1:three_prime_utr;Parent=Msa0389880-mRNA-1

Gene Sequence

>Msa0389880

ATGGGTCACCATTCATGCTGCAATCAACAGAAGGTTAAGAGAGGCCTTTGGTCACCTGAAGAAGATGAGAAACTCATTAGATACATTACTACCCATGGTTATGGTTGCTGGAGTGAAGTTCCTGAGAAAGCTGGGCTTCAAAGGTGTGGTAAGAGTTGTAGATTGAGATGGATAAATTATTTAAGGCCTGATATTAGAAGAGGAAGGTTTACACCTGAGGAGGAGAAGTTAATTATAAGCCTTCATGGGGTTGTTGGCAACAGATGGGCTCACATTGCAAGCCACTTGCCTGGTAGAACAGACAATGAAATAAAAAACTATTGGAATTCATGGATCAAAAAGAAAATTAGAAAGTCTTCTTCTTCTTCTCCTAATTTATCAACACCAACTATTGATCATCATCATCATCCTCAGTTGATCAATTACAGTTCCATTAATCAACTAGATAATTACTTTACCAACCAAGAAAATGTAACAACAAAAGAAACCTTATTTTCATCAACATGTCCTTTATTTATGTTTGACACAAGTTCACTACATGAAACAACAGCAACAGACACCAATGTAATAAGACCAGAAGTACTATTCCATCATGATTCTGTGAGTTTAAGTTCTGACACATGGAACTTGAATCACCATGATCATCATCAAGTTCAGGCATTTCCTCCTCATCCAGCTGCAATAGCTTTTACAACAATTCATGATACTAGTAATTATAATCTTCCACCATTGATAGAGAATAATGTGGAAAACAGCATGGTGCAAATTGATCAAGTGCAATCTTGTAATATGGATGAGGAAGGAGGAGAGTTATTAACATTGGAGTCATTGCAAAGACAAGAAGAGTTGAATGAATGGGTGGAAACTCAACAACAGTGTCCTAGCTTTATTTTCAGCTGGGAGAGTGTTGAAGGACAAATGGGAGGTGAAGAACAAGTACTGGTACCAAACTCATCACATATGGGAACACCTAATTCACTTTCTCCTTTTCCTTCTTCACTATTATGA

Protein sequence

>Msa0389880

MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHGVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKKIRKSSSSSPNLSTPTIDHHHHPQLINYSSINQLDNYFTNQENVTTKETLFSSTCPLFMFDTSSLHETTATDTNVIRPEVLFHHDSVSLSSDTWNLNHHDHHQVQAFPPHPAAIAFTTIHDTSNYNLPPLIENNVENSMVQIDQVQSCNMDEEGGELLTLESLQRQEELNEWVETQQQCPSFIFSWESVEGQMGGEEQVLVPNSSHMGTPNSLSPFPSSLL*